F340050

General Info

Members Datasets Scaffolds Average Seq Length
227 151 454 338

Family's Representative Sequence

Representative Sequence 3300026121|Ga0207683_10107921|Ga0207683_101079212
Length 327
Sequence MRQTSLFPLTLRPTTRDIADSVKDGGVANLPDAMRKADAATYQEVRCRSALNRVKGMPFEWTLNPYRGCTHGCHYCFARRYHTQFELDADDSFASVILVKVNFVEVLSKELSRERWDRDTSVALGTATDPYQPIEGQYKLTRGAIVELGASKTPFGIITKGPMVMRDADVLQQASRSARVTVCVSVPTVDEDAWRKLEPGTAHPRQRLRAVRALRRAGIRAGVLMAPLVPGITTSRKLVESTLAAIAEHDAAFVGANVLHLEGGTRDHFMTYLAKDFPSLVPGYERLFAHGAKRVPKTYSAAVHETVRELREALGLSEKRFEMKNEE

Samples

Sample ID Description Type Environment
1 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
96 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
104 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
105 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
106 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
107 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
108 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
133 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
147 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
150 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
151 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.2
Nodule 0
Rhizoplane 7.93
Rhizosphere 89.43
Stem 0
Stem Tuber 0
Unclassified 11.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207683_10107921 3300026121 Bacteria 2491
2 Ga0065712_10085724 3300005290 Bacteria 2676
3 Ga0065715_10003575 3300005293 Bacteria 12126
4 Ga0065715_10007301 3300005293 Bacteria 3419
5 Ga0065715_10146362 3300005293 Bacteria 1784
6 Ga0070683_100007389 3300005329 Bacteria 9282
7 Ga0070683_100056361 3300005329 Bacteria 3650
8 Ga0070683_100123655 3300005329 Unclassified 2445
9 Ga0070690_100379713 3300005330 Bacteria 1033
10 Ga0070670_100003211 3300005331 Bacteria 13494
11 Ga0070670_100013060 3300005331 Bacteria 7113
12 Ga0070670_100024883 3300005331 Bacteria 5150
13 Ga0070670_100031830 3300005331 Bacteria 4543
14 Ga0070670_100376073 3300005331 Unclassified 1251
15 Ga0070677_10020513 3300005333 Bacteria 2409
16 Ga0068869_100048941 3300005334 Bacteria 3059
17 Ga0068869_100164494 3300005334 Unclassified 1729
18 Ga0070666_10013126 3300005335 Bacteria 5248
19 Ga0070666_10088648 3300005335 Bacteria 2123
20 Ga0068868_100065950 3300005338 Bacteria 2877
21 Ga0070660_100348151 3300005339 Bacteria 1220
22 Ga0070689_100124055 3300005340 Bacteria 2065
23 Ga0070691_10068430 3300005341 Bacteria 1719
24 Ga0070661_100094289 3300005344 Bacteria 2218
25 Ga0070692_10085566 3300005345 Bacteria 1706
26 Ga0070668_100243251 3300005347 Unclassified 1491
27 Ga0070669_100084122 3300005353 Bacteria 2373
28 Ga0070674_100002680 3300005356 Bacteria 9861
29 Ga0070674_100009288 3300005356 Bacteria 5887
30 Ga0070674_100306465 3300005356 Bacteria 1268
31 Ga0070673_100008970 3300005364 Bacteria 6689
32 Ga0070659_100290601 3300005366 Bacteria 1361
33 Ga0070709_10172887 3300005434 Unclassified 1511
34 Ga0070713_100010796 3300005436 Bacteria 6617
35 Ga0070700_100272463 3300005441 Bacteria 1224
36 Ga0070662_100014136 3300005457 Bacteria 5326
37 Ga0070699_100057867 3300005518 Unclassified 3357
38 Ga0070684_100000213 3300005535 Bacteria 40774
39 Ga0070684_100073537 3300005535 Bacteria 3012
40 Ga0070672_100017764 3300005543 Bacteria 5126
41 Ga0070686_100043035 3300005544 Bacteria 2831
42 Ga0070686_100104060 3300005544 Bacteria 1922
43 Ga0070695_100029102 3300005545 Bacteria 3431
44 Ga0070695_100150268 3300005545 Bacteria 1625
45 Ga0070665_100092684 3300005548 Bacteria 3026
46 Ga0070665_100114156 3300005548 Bacteria 2704
47 Ga0070704_100328537 3300005549 Bacteria 1284
48 Ga0070664_100000156 3300005564 Bacteria 47186
49 Ga0068854_100078399 3300005578 Bacteria 2433
50 Ga0068859_100224047 3300005617 Bacteria 1968
51 Ga0068861_100132356 3300005719 Bacteria 2025
52 Ga0068863_100067820 3300005841 Bacteria 3374
53 Ga0068858_100038260 3300005842 Bacteria 4450
54 Ga0068860_100046416 3300005843 Bacteria 4141
55 Ga0075365_10001319 3300006038 Bacteria 11079
56 Ga0075366_10010625 3300006195 Bacteria 5171
57 Ga0075428_100010153 3300006844 Bacteria 10461
58 Ga0075428_100052758 3300006844 Bacteria 4456
59 Ga0075430_100001139 3300006846 Bacteria 21210
60 Ga0075430_100049142 3300006846 Bacteria 3560
61 Ga0075431_100021279 3300006847 Bacteria 6628
62 Ga0075431_100041775 3300006847 Bacteria 4729
63 Ga0075431_100076020 3300006847 Bacteria 3466
64 Ga0075434_100293439 3300006871 Bacteria 1646
65 Ga0075429_100069273 3300006880 Bacteria 3072
66 Ga0075429_100179422 3300006880 Bacteria 1856
67 Ga0068865_100158391 3300006881 Bacteria 1725
68 Ga0097620_100224050 3300006931 Bacteria 1968
69 Ga0075435_100139113 3300007076 Bacteria 2036
70 Ga0111539_10031311 3300009094 Bacteria 6462
71 Ga0111539_10320161 3300009094 Unclassified 1805
72 Ga0105245_10154532 3300009098 Bacteria 2172
73 Ga0114129_10026986 3300009147 Bacteria 8130
74 Ga0114129_10028223 3300009147 Bacteria 7951
75 Ga0114129_10080128 3300009147 Unclassified 4539
76 Ga0114129_10086345 3300009147 Unclassified 4352
77 Ga0114129_10365683 3300009147 Unclassified 1908
78 Ga0105243_10196688 3300009148 Bacteria 1765
79 Ga0105242_10128134 3300009176 Bacteria 2187
80 Ga0105248_10026779 3300009177 Bacteria 6412
81 Ga0105239_10563552 3300010375 Bacteria 1298
82 Ga0157374_10026839 3300013296 Bacteria 5186
83 Ga0163162_10249771 3300013306 Bacteria 1906
84 Ga0157375_10081359 3300013308 Bacteria 3279
85 Ga0163163_10018017 3300014325 Bacteria 6597
86 Ga0163163_10051170 3300014325 Bacteria 4072
87 Ga0157380_10029308 3300014326 Bacteria 4206
88 Ga0157380_10296036 3300014326 Bacteria 1488
89 Ga0157379_10053373 3300014968 Bacteria 3610
90 Ga0157379_10413467 3300014968 Bacteria 1241
91 Ga0157376_10193399 3300014969 Bacteria 1867
92 Ga0207697_10000924 3300025315 Bacteria 16557
93 Ga0207697_10012847 3300025315 Bacteria 3502
94 Ga0207682_10023350 3300025893 Bacteria 2442
95 Ga0207710_10020425 3300025900 Bacteria 2831
96 Ga0207688_10001828 3300025901 Bacteria 11349
97 Ga0207688_10012499 3300025901 Bacteria 4621
98 Ga0207647_10073735 3300025904 Bacteria 2056
99 Ga0207645_10058125 3300025907 Bacteria 2469
100 Ga0207645_10218114 3300025907 Unclassified 1257
101 Ga0207695_10345234 3300025913 Unclassified 1376
102 Ga0207660_10087030 3300025917 Bacteria 2308
103 Ga0207649_10064708 3300025920 Bacteria 2313
104 Ga0207650_10003767 3300025925 Bacteria 10370
105 Ga0207650_10129490 3300025925 Bacteria 1973
106 Ga0207650_10176101 3300025925 Unclassified 1702
107 Ga0207650_10257268 3300025925 Bacteria 1415
108 Ga0207659_10181186 3300025926 Bacteria 1669
109 Ga0207706_10083675 3300025933 Bacteria 2805
110 Ga0207706_10102125 3300025933 Bacteria 2523
111 Ga0207706_10393517 3300025933 Unclassified 1202
112 Ga0207670_10069597 3300025936 Bacteria 2428
113 Ga0207669_10014909 3300025937 Bacteria 3908
114 Ga0207691_10079010 3300025940 Bacteria 2961
115 Ga0207711_10031872 3300025941 Bacteria 4454
116 Ga0207711_10270184 3300025941 Bacteria 1564
117 Ga0207689_10032000 3300025942 Bacteria 4375
118 Ga0207689_10150401 3300025942 Bacteria 1919
119 Ga0207661_10003873 3300025944 Bacteria 10433
120 Ga0207661_10043963 3300025944 Bacteria 3527
121 Ga0207679_10032658 3300025945 Bacteria 3657
122 Ga0207679_10051120 3300025945 Unclassified 3024
123 Ga0207651_10001688 3300025960 Bacteria 10167
124 Ga0207703_10005029 3300026035 Bacteria 10722
125 Ga0207708_10009610 3300026075 Bacteria 7170
126 Ga0207641_10054050 3300026088 Bacteria 3406
127 Ga0207648_10000959 3300026089 Bacteria 32621
128 Ga0207648_10074965 3300026089 Bacteria 2950
129 Ga0207648_10094545 3300026089 Bacteria 2614
130 Ga0207674_10019418 3300026116 Bacteria 7359
131 Ga0207675_100030301 3300026118 Bacteria 5039
132 Ga0207675_100072902 3300026118 Bacteria 3212
133 Ga0207683_10046286 3300026121 Bacteria 3807
134 Ga0268266_10045427 3300028379 Bacteria 3758
135 Ga0307408_100290099 3300031548 Bacteria 1366
136 Ga0307410_10379926 3300031852 Bacteria 1136
137 Ga0307409_100229977 3300031995 Unclassified 1680
138 Ga0307416_100105310 3300032002 Bacteria 2468
139 Ga0307415_100023874 3300032126 Bacteria 3806
140 Ga0373943_0068060 3300035170 Bacteria 1797
141 Ga0373931_0149240 3300035691 Bacteria 1361
142 Ga0373935_0271828 3300035692 Bacteria 1191
143 Ga0373935_0298448 3300035692 Bacteria 1138
144 Ga0373933_0094142 3300035724 Unclassified 1852
145 Ga0373947_0137995 3300035725 Unclassified 1562
146 Ga0373937_0001393 3300036401 Bacteria 20204
147 Ga0373925_0014489 3300037068 Bacteria 5698
148 Ga0436365_0200735 3300039437 Unclassified 1840
149 Ga0495629_0067106 3300046459 Bacteria 2504
150 Ga0495582_0206618 3300046473 Unclassified 1122
151 Ga0495622_0051506 3300046557 Unclassified 1910
152 Ga0495658_0041430 3300046683 Bacteria 2566
153 Ga0495684_0113337 3300047471 Bacteria 2045
154 Ga0496100_0164510 3300048903 Bacteria 1593
155 Ga0496102_0010458 3300048905 Bacteria 7985
156 Ga0496103_0048553 3300048906 Bacteria 2623
157 Ga0496104_0115426 3300048907 Bacteria 2576
158 Ga0496105_0023320 3300048908 Bacteria 5017
159 Ga0496106_0055521 3300048909 Bacteria 2994
160 Ga0496107_0276117 3300048910 Bacteria 1251
161 Ga0496108_0002727 3300048911 Bacteria 14118
162 Ga0496109_0003877 3300048912 Bacteria 12492
163 Ga0496109_0029415 3300048912 Bacteria 4920
164 Ga0496110_0000648 3300048913 Bacteria 23803
165 Ga0496110_0038240 3300048913 Bacteria 4174
166 Ga0496112_0007676 3300048915 Bacteria 9598
167 Ga0496112_0022323 3300048915 Bacteria 6031
168 Ga0496112_0027663 3300048915 Bacteria 5469
169 Ga0496113_0169882 3300048916 Bacteria 1727
170 Ga0496114_0062873 3300048917 Bacteria 3107
171 Ga0496114_0468740 3300048917 Bacteria 1114
172 Ga0501036_0081595 3300049572 Bacteria 2733
173 Ga0501036_0390772 3300049572 Unclassified 1161
174 Ga0501040_0053098 3300049576 Bacteria 2775
175 Ga0501040_0150461 3300049576 Bacteria 1642
176 Ga0501041_0159193 3300049577 Unclassified 1411
177 Ga0501042_0249824 3300049578 Bacteria 1280
178 Ga0501046_0104119 3300049580 Bacteria 2175
179 Ga0501047_0113957 3300049581 Bacteria 2586
180 Ga0501048_0273253 3300049582 Bacteria 1201
181 Ga0501069_0059853 3300049585 Bacteria 2126
182 Ga0501071_0266768 3300049587 Bacteria 1294
183 Ga0501072_0011160 3300049588 Bacteria 6858
184 Ga0501072_0089285 3300049588 Bacteria 2446
185 Ga0501072_0181214 3300049588 Bacteria 1680
186 Ga0501075_0040838 3300049591 Bacteria 3476
187 Ga0501075_0058067 3300049591 Bacteria 2914
188 Ga0501075_0069357 3300049591 Bacteria 2664
189 Ga0501076_0022578 3300049592 Bacteria 4837
190 Ga0501076_0023486 3300049592 Bacteria 4754
191 Ga0501077_0016739 3300049593 Bacteria 4623
192 Ga0501079_0110886 3300049741 Bacteria 2132
193 Ga0501079_0244983 3300049741 Unclassified 1401
194 Ga0501079_0257524 3300049741 Bacteria 1364
195 Ga0501079_0390565 3300049741 Unclassified 1091
196 Ga0501080_0041731 3300049742 Bacteria 4274
197 Ga0501080_0215672 3300049742 Bacteria 1758
198 Ga0501083_0134290 3300049744 Bacteria 1622
199 Ga0501045_0004143 3300049824 Bacteria 10015
200 Ga0501045_0064144 3300049824 Bacteria 2696
201 Ga0501045_0134959 3300049824 Bacteria 1835
202 nmdc:mga0k408_23704_c1 3300050493 Bacteria 3465
203 nmdc:mga05p37_27520_c1 3300050507 Bacteria 6922
204 nmdc:mga05p37_369835_c1 3300050507 Bacteria 1683
205 nmdc:mga05p37_473093_c1 3300050507 Bacteria 1445
206 nmdc:mga05p37_58054_c1 3300050507 Bacteria 4766
207 nmdc:mga09592_164444_c1 3300050508 Bacteria 1917
208 nmdc:mga09592_62116_c1 3300050508 Bacteria 3160
209 nmdc:mga0qj67_13913_c1 3300050509 Bacteria 6075
210 nmdc:mga0qj67_18093_c1 3300050509 Bacteria 5369
211 nmdc:mga0qj67_68322_c1 3300050509 Unclassified 2832
212 nmdc:mga0qj67_87429_c1 3300050509 Bacteria 2501
213 nmdc:mga06r32_100237_c1 3300050510 Bacteria 2841
214 nmdc:mga06r32_144410_c1 3300050510 Bacteria 2357
215 nmdc:mga06r32_60112_c1 3300050510 Bacteria 3656
216 nmdc:mga08y16_56418_c1 3300050511 Bacteria 4105
217 nmdc:mga08y16_67587_c1 3300050511 Bacteria 3727
218 nmdc:mga0n895_91912_c1 3300050512 Bacteria 3037
219 nmdc:mga0rr50_13860_c1 3300050513 Bacteria 5267
220 Ga0495595_0007116 3300053084 Bacteria 4573
221 Ga0500628_006386 3300053129 Bacteria 1994
222 Ga0500628_033033 3300053129 Bacteria 1136
223 Ga0501084_0069151 3300054114 Bacteria 2956
224 Ga0501084_0084227 3300054114 Bacteria 2669
225 Ga0590074_000185 3300059423 Bacteria 7856
226 Ga0590075_000756 3300059424 Bacteria 8574
227 Ga0590077_000988 3300059426 Bacteria 7225
228 Ga0207683_10107921
229 Ga0065712_10085724
230 Ga0065715_10003575
231 Ga0065715_10007301
232 Ga0065715_10146362
233 Ga0070683_100007389
234 Ga0070683_100056361
235 Ga0070683_100123655
236 Ga0070690_100379713
237 Ga0070670_100003211
238 Ga0070670_100013060
239 Ga0070670_100024883
240 Ga0070670_100031830
241 Ga0070670_100376073
242 Ga0070677_10020513
243 Ga0068869_100048941
244 Ga0068869_100164494
245 Ga0070666_10013126
246 Ga0070666_10088648
247 Ga0068868_100065950
248 Ga0070660_100348151
249 Ga0070689_100124055
250 Ga0070691_10068430
251 Ga0070661_100094289
252 Ga0070692_10085566
253 Ga0070668_100243251
254 Ga0070669_100084122
255 Ga0070674_100002680
256 Ga0070674_100009288
257 Ga0070674_100306465
258 Ga0070673_100008970
259 Ga0070659_100290601
260 Ga0070709_10172887
261 Ga0070713_100010796
262 Ga0070700_100272463
263 Ga0070662_100014136
264 Ga0070699_100057867
265 Ga0070684_100000213
266 Ga0070684_100073537
267 Ga0070672_100017764
268 Ga0070686_100043035
269 Ga0070686_100104060
270 Ga0070695_100029102
271 Ga0070695_100150268
272 Ga0070665_100092684
273 Ga0070665_100114156
274 Ga0070704_100328537
275 Ga0070664_100000156
276 Ga0068854_100078399
277 Ga0068859_100224047
278 Ga0068861_100132356
279 Ga0068863_100067820
280 Ga0068858_100038260
281 Ga0068860_100046416
282 Ga0075365_10001319
283 Ga0075366_10010625
284 Ga0075428_100010153
285 Ga0075428_100052758
286 Ga0075430_100001139
287 Ga0075430_100049142
288 Ga0075431_100021279
289 Ga0075431_100041775
290 Ga0075431_100076020
291 Ga0075434_100293439
292 Ga0075429_100069273
293 Ga0075429_100179422
294 Ga0068865_100158391
295 Ga0097620_100224050
296 Ga0075435_100139113
297 Ga0111539_10031311
298 Ga0111539_10320161
299 Ga0105245_10154532
300 Ga0114129_10026986
301 Ga0114129_10028223
302 Ga0114129_10080128
303 Ga0114129_10086345
304 Ga0114129_10365683
305 Ga0105243_10196688
306 Ga0105242_10128134
307 Ga0105248_10026779
308 Ga0105239_10563552
309 Ga0157374_10026839
310 Ga0163162_10249771
311 Ga0157375_10081359
312 Ga0163163_10018017
313 Ga0163163_10051170
314 Ga0157380_10029308
315 Ga0157380_10296036
316 Ga0157379_10053373
317 Ga0157379_10413467
318 Ga0157376_10193399
319 Ga0207697_10000924
320 Ga0207697_10012847
321 Ga0207682_10023350
322 Ga0207710_10020425
323 Ga0207688_10001828
324 Ga0207688_10012499
325 Ga0207647_10073735
326 Ga0207645_10058125
327 Ga0207645_10218114
328 Ga0207695_10345234
329 Ga0207660_10087030
330 Ga0207649_10064708
331 Ga0207650_10003767
332 Ga0207650_10129490
333 Ga0207650_10176101
334 Ga0207650_10257268
335 Ga0207659_10181186
336 Ga0207706_10083675
337 Ga0207706_10102125
338 Ga0207706_10393517
339 Ga0207670_10069597
340 Ga0207669_10014909
341 Ga0207691_10079010
342 Ga0207711_10031872
343 Ga0207711_10270184
344 Ga0207689_10032000
345 Ga0207689_10150401
346 Ga0207661_10003873
347 Ga0207661_10043963
348 Ga0207679_10032658
349 Ga0207679_10051120
350 Ga0207651_10001688
351 Ga0207703_10005029
352 Ga0207708_10009610
353 Ga0207641_10054050
354 Ga0207648_10000959
355 Ga0207648_10074965
356 Ga0207648_10094545
357 Ga0207674_10019418
358 Ga0207675_100030301
359 Ga0207675_100072902
360 Ga0207683_10046286
361 Ga0268266_10045427
362 Ga0307408_100290099
363 Ga0307410_10379926
364 Ga0307409_100229977
365 Ga0307416_100105310
366 Ga0307415_100023874
367 Ga0373943_0068060
368 Ga0373931_0149240
369 Ga0373935_0271828
370 Ga0373935_0298448
371 Ga0373933_0094142
372 Ga0373947_0137995
373 Ga0373937_0001393
374 Ga0373925_0014489
375 Ga0436365_0200735
376 Ga0495629_0067106
377 Ga0495582_0206618
378 Ga0495622_0051506
379 Ga0495658_0041430
380 Ga0495684_0113337
381 Ga0496100_0164510
382 Ga0496102_0010458
383 Ga0496103_0048553
384 Ga0496104_0115426
385 Ga0496105_0023320
386 Ga0496106_0055521
387 Ga0496107_0276117
388 Ga0496108_0002727
389 Ga0496109_0003877
390 Ga0496109_0029415
391 Ga0496110_0000648
392 Ga0496110_0038240
393 Ga0496112_0007676
394 Ga0496112_0022323
395 Ga0496112_0027663
396 Ga0496113_0169882
397 Ga0496114_0062873
398 Ga0496114_0468740
399 Ga0501036_0081595
400 Ga0501036_0390772
401 Ga0501040_0053098
402 Ga0501040_0150461
403 Ga0501041_0159193
404 Ga0501042_0249824
405 Ga0501046_0104119
406 Ga0501047_0113957
407 Ga0501048_0273253
408 Ga0501069_0059853
409 Ga0501071_0266768
410 Ga0501072_0011160
411 Ga0501072_0089285
412 Ga0501072_0181214
413 Ga0501075_0040838
414 Ga0501075_0058067
415 Ga0501075_0069357
416 Ga0501076_0022578
417 Ga0501076_0023486
418 Ga0501077_0016739
419 Ga0501079_0110886
420 Ga0501079_0244983
421 Ga0501079_0257524
422 Ga0501079_0390565
423 Ga0501080_0041731
424 Ga0501080_0215672
425 Ga0501083_0134290
426 Ga0501045_0004143
427 Ga0501045_0064144
428 Ga0501045_0134959
429 nmdc:mga0k408_23704_c1
430 nmdc:mga05p37_27520_c1
431 nmdc:mga05p37_369835_c1
432 nmdc:mga05p37_473093_c1
433 nmdc:mga05p37_58054_c1
434 nmdc:mga09592_164444_c1
435 nmdc:mga09592_62116_c1
436 nmdc:mga0qj67_13913_c1
437 nmdc:mga0qj67_18093_c1
438 nmdc:mga0qj67_68322_c1
439 nmdc:mga0qj67_87429_c1
440 nmdc:mga06r32_100237_c1
441 nmdc:mga06r32_144410_c1
442 nmdc:mga06r32_60112_c1
443 nmdc:mga08y16_56418_c1
444 nmdc:mga08y16_67587_c1
445 nmdc:mga0n895_91912_c1
446 nmdc:mga0rr50_13860_c1
447 Ga0495595_0007116
448 Ga0500628_006386
449 Ga0500628_033033
450 Ga0501084_0069151
451 Ga0501084_0084227
452 Ga0590074_000185
453 Ga0590075_000756
454 Ga0590077_000988

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

63

267

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4rh1-assembly1.cif.gz_A spore photoproduct lyase c140a/s76c mutant with bound adomet and dinucleoside spore photoproduct 0.6931 43 312
2yx0-assembly1.cif.gz_A crystal structure of p. horikoshii tyw1 0.6907 121 246
6b4c-assembly2.cif.gz_B structure of viperin from trichoderma virens 0.6837 98 314
4k9r-assembly1.cif.gz_A spore photoproduct lyase y98f mutant 0.6801 43 315
4fhd-assembly1.cif.gz_A spore photoproduct lyase complexed with dinucleoside spore photoproduct 0.6782 43 312
ID Description Score Start End Superfamily
af_P9WL79_106_315_3.80.30.30 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme; 0.9298 105 311 3.80.30.30
af_P9WL79_106_315_3.80.30.30 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme; 0.9128 105 311 3.80.30.30
af_Q58096_62_257_3.80.30.30 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme; 0.7886 101 314 3.80.30.30
af_Q58096_62_257_3.80.30.30 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme; 0.764 101 314 3.80.30.30
af_A0A1D6Q1I1_1_160_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7343 156 314 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7W1PG68-F1-model_v4 Radical SAM protein 0.9524 145 314 GO:0003824
GO:0046872
GO:0051536
AF-A0A536NT86-F1-model_v4 Radical SAM protein 0.9399 108 314 GO:0003824
GO:0046872
GO:0051536
AF-A0A6L5FZ01-F1-model_v4 Radical SAM protein 0.9364 91 312 GO:0004519
GO:0016539
GO:0046872
GO:0051536
AF-A0A7W1ENE0-F1-model_v4 Radical SAM protein 0.9338 129 314 GO:0003824
GO:0046872
GO:0051536
AF-A0A534ZWF8-F1-model_v4 Radical SAM protein 0.9241 123 311 GO:0003824
GO:0046872
GO:0051536

Map