F339710

General Info

Members Datasets Scaffolds Average Seq Length
227 203 454 281

Family's Representative Sequence

Representative Sequence 3300005545|Ga0070695_100184943|Ga0070695_1001849431
Length 315
Sequence MRLVGATASGWTINLERLRLGSARQRCYEGAMRRLENRVAVVTGAGSGIGRATSLELAQAGCELALVDLKPEPLAETAAAIERLGRRATWHVVDVSSKPQMRELVDRVVREHGSAHVLVNNAGVAVTATFEDHTIEDFEWLIGINLWGVIYGCKFFLPVLREADEAHIVNISSVFGFVGMPLNSSYCASKFAVRGFSESLRAELNGSPIGVTSVHPGGVATNIVRDSRVAEKGFEGLHQTSVQRFKKMLPPEEAARAIVRGIRRNAARVLITREAYLIDILKRLFPVFSSELVGRHWRRVVQKQIADTARLEARG

Samples

Sample ID Description Type Environment
1 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
47 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
48 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
49 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
53 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
54 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
55 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
56 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
61 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
62 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
67 3300033544 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 Metagenome Unclassified
68 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
69 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
70 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
71 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
72 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
73 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
85 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
86 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
87 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
88 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
89 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
90 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
91 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
92 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
93 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
94 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
95 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
96 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
106 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
107 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
108 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
109 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
110 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
111 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
119 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
120 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
145 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
146 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
158 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
161 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
162 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
163 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
164 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
165 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
166 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
167 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
168 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
171 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
172 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
173 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
174 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
175 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
176 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
177 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
178 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
179 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
180 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
181 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
182 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
183 2904699407
184 2906610324
185 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
186 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
187 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
188 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
189 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
190 2922425934
191 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
192 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
193 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
194 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
195 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
196 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
197 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
198 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
199 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
200 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
201 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
202 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
203 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.82
Metatranscriptomes 1.34
Isolates 13.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.49
Nodule 13.22
Rhizoplane 3.52
Rhizosphere 68.28
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070695_100184943 3300005545 Bacteria 1479
2 JGI25165J46597_1011632 3300003214 Bacteria 1253
3 JGI25160J50197_1003414 3300003354 Bacteria 7113
4 Ga0070680_100181001 3300005336 Bacteria 1775
5 Ga0070674_100419468 3300005356 Bacteria 1098
6 Ga0070659_100114969 3300005366 Bacteria 2174
7 Ga0070667_100227670 3300005367 Bacteria 1661
8 Ga0070667_100468200 3300005367 Bacteria 1153
9 Ga0070714_100055785 3300005435 Bacteria 3378
10 Ga0070713_100023213 3300005436 Bacteria 4809
11 Ga0070663_100146544 3300005455 Bacteria 1807
12 Ga0068867_100045562 3300005459 Bacteria 3217
13 Ga0070679_100260238 3300005530 Bacteria 1690
14 Ga0070697_100559684 3300005536 Bacteria 1003
15 Ga0068853_100249733 3300005539 Bacteria 1627
16 Ga0070704_100277809 3300005549 Bacteria 1386
17 Ga0068855_100710709 3300005563 Bacteria 1075
18 Ga0068852_100018862 3300005616 Bacteria 5445
19 Ga0068861_100409530 3300005719 Bacteria 1205
20 Ga0081455_10047950 3300005937 Bacteria 3695
21 Ga0081455_10093071 3300005937 Bacteria 2437
22 Ga0070717_10009239 3300006028 Bacteria 7409
23 Ga0070717_10046152 3300006028 Bacteria 3564
24 Ga0070717_10398253 3300006028 Bacteria 1236
25 Ga0070717_10464221 3300006028 Bacteria 1142
26 Ga0075365_10217407 3300006038 Bacteria 1340
27 Ga0075365_10461873 3300006038 Bacteria 897
28 Ga0075363_100043411 3300006048 Bacteria 2378
29 Ga0075370_10023238 3300006353 Bacteria 3413
30 Ga0075370_10068406 3300006353 Bacteria 2028
31 Ga0075428_100196589 3300006844 Bacteria 2181
32 Ga0068865_100131680 3300006881 Bacteria 1874
33 Ga0099822_1005624 3300006943 Bacteria 16355
34 Ga0105240_10132052 3300009093 Bacteria 2994
35 Ga0111539_10095304 3300009094 Bacteria 3496
36 Ga0105245_10270690 3300009098 Bacteria 1657
37 Ga0105238_10154964 3300009551 Bacteria 2266
38 Ga0105249_10769265 3300009553 Bacteria 1026
39 Ga0163162_10152841 3300013306 Bacteria 2426
40 Ga0209233_1014815 3300025261 Bacteria 2186
41 Ga0207707_10010682 3300025912 Bacteria 7977
42 Ga0207660_10053306 3300025917 Bacteria 2882
43 Ga0207649_10145359 3300025920 Bacteria 1627
44 Ga0207652_10119852 3300025921 Bacteria 2340
45 Ga0207646_10299312 3300025922 Bacteria 1453
46 Ga0207700_10100867 3300025928 Bacteria 2302
47 Ga0207664_10276861 3300025929 Bacteria 1471
48 Ga0207670_10100356 3300025936 Bacteria 2066
49 Ga0207668_10551426 3300025972 Bacteria 998
50 Ga0207658_10050397 3300025986 Bacteria 3063
51 Ga0207678_10100354 3300026067 Bacteria 2473
52 Ga0207678_10184038 3300026067 Bacteria 1784
53 Ga0207675_100058504 3300026118 Bacteria 3597
54 Ga0209589_1000007 3300027357 Bacteria 425699
55 Ga0209489_100008 3300027361 Bacteria 425699
56 Ga0209700_100009 3300027363 Bacteria 425699
57 Ga0207428_10062538 3300027907 Bacteria 2943
58 Ga0268266_10411113 3300028379 Bacteria 1281
59 Ga0268265_10256841 3300028380 Bacteria 1551
60 Ga0268265_10330402 3300028380 Bacteria 1384
61 Ga0265337_1003522 3300028556 Bacteria 6757
62 Ga0265334_10068362 3300028573 Bacteria 1326
63 Ga0307515_10022977 3300028794 Bacteria 10964
64 Ga0265770_1000637 3300030878 Bacteria 4853
65 Ga0265760_10000085 3300031090 Bacteria 23936
66 Ga0265332_10056552 3300031238 Bacteria 1681
67 Ga0265332_10060851 3300031238 Bacteria 1615
68 Ga0265320_10000183 3300031240 Bacteria 52768
69 Ga0265340_10017438 3300031247 Bacteria 3716
70 Ga0307509_10313405 3300031507 Bacteria 1310
71 Ga0307408_100631864 3300031548 Bacteria 955
72 Ga0307508_10138617 3300031616 Bacteria 2036
73 Ga0265314_10015154 3300031711 Bacteria 6128
74 Ga0265342_10007598 3300031712 Bacteria 7912
75 Ga0307416_100542714 3300032002 Bacteria 1235
76 Ga0315911_1000012 3300033442 Bacteria 248988
77 Ga0316215_1002807 3300033544 Bacteria 1655
78 Ga0373923_0018603 3300035111 Bacteria 2677
79 Ga0373936_0023461 3300035113 Bacteria 2404
80 Ga0373957_0199325 3300035120 Bacteria 834
81 Ga0373943_0001715 3300035170 Bacteria 9938
82 Ga0373946_0008900 3300035171 Bacteria 3690
83 Ga0373924_0017386 3300035410 Bacteria 2758
84 Ga0373935_0002990 3300035692 Bacteria 9750
85 Ga0373927_0001230 3300035695 Bacteria 19452
86 Ga0373947_0001223 3300035725 Bacteria 15824
87 Ga0373947_0019221 3300035725 Bacteria 3938
88 Ga0373937_0077721 3300036401 Bacteria 3067
89 Ga0372808_000223 3300036459 Bacteria 3696
90 Ga0373925_0002121 3300037068 Bacteria 16252
91 Ga0373925_0327253 3300037068 Bacteria 1241
92 Ga0436361_0734949 3300039447 Bacteria 1461
93 Ga0466959_0011151 3300045049 Bacteria 6451
94 Ga0495603_0000667 3300046455 Bacteria 19417
95 Ga0495629_0000283 3300046459 Bacteria 43929
96 Ga0495638_0253572 3300046460 Bacteria 969
97 Ga0495641_0011873 3300046461 Bacteria 4921
98 Ga0495651_0098740 3300046462 Bacteria 2178
99 Ga0495651_0263830 3300046462 Bacteria 1171
100 Ga0495653_0042720 3300046463 Bacteria 3528
101 Ga0495580_0002411 3300046472 Bacteria 16335
102 Ga0495582_0000555 3300046473 Bacteria 20612
103 Ga0495639_0000423 3300046475 Bacteria 20176
104 Ga0495662_0009557 3300046476 Bacteria 4756
105 Ga0495664_0028448 3300046477 Bacteria 3264
106 Ga0495584_0205422 3300046491 Bacteria 1001
107 Ga0495594_0001986 3300046499 Bacteria 10660
108 Ga0495606_0095241 3300046507 Bacteria 1823
109 Ga0495618_0071749 3300046514 Bacteria 2203
110 Ga0495628_0028687 3300046516 Bacteria 4520
111 Ga0495628_0310614 3300046516 Bacteria 1165
112 Ga0495630_0016818 3300046517 Bacteria 5350
113 Ga0495652_0079975 3300046529 Bacteria 2701
114 Ga0495652_0196271 3300046529 Bacteria 1536
115 Ga0495652_0245817 3300046529 Bacteria 1328
116 Ga0495665_0001096 3300046531 Bacteria 14317
117 Ga0495645_0023752 3300046543 Bacteria 4443
118 Ga0495622_0003133 3300046557 Bacteria 7832
119 Ga0495656_0056979 3300046615 Bacteria 1690
120 Ga0495634_0004577 3300046642 Bacteria 10802
121 Ga0495634_0049860 3300046642 Bacteria 2813
122 Ga0495635_0002530 3300046663 Bacteria 12506
123 Ga0495659_0079942 3300046664 Bacteria 1239
124 Ga0495588_0023415 3300046674 Bacteria 3057
125 Ga0495657_0211016 3300046675 Bacteria 1180
126 Ga0495623_0029359 3300046679 Bacteria 3539
127 Ga0495646_0203324 3300046680 Bacteria 1078
128 Ga0495647_0001720 3300046681 Bacteria 6784
129 Ga0495658_0002218 3300046683 Bacteria 9819
130 Ga0495669_0012048 3300046684 Bacteria 3676
131 Ga0495613_0001910 3300046689 Bacteria 15801
132 Ga0495613_0135553 3300046689 Bacteria 1762
133 Ga0495624_0001800 3300046690 Bacteria 16366
134 Ga0495581_0000346 3300047315 Bacteria 23081
135 Ga0495604_0097929 3300047317 Bacteria 2162
136 Ga0495674_0018654 3300047319 Bacteria 6455
137 Ga0495674_0225533 3300047319 Bacteria 1548
138 Ga0495676_0012424 3300047321 Bacteria 7670
139 Ga0495683_0192719 3300047323 Bacteria 923
140 Ga0495684_0022580 3300047471 Bacteria 4838
141 Ga0495593_0001297 3300047673 Bacteria 14662
142 Ga0496102_0055855 3300048905 Bacteria 3601
143 Ga0496102_0216074 3300048905 Bacteria 1807
144 Ga0496104_0125621 3300048907 Bacteria 2463
145 Ga0496104_0414046 3300048907 Bacteria 1260
146 Ga0496105_0405121 3300048908 Bacteria 1082
147 Ga0496111_0108505 3300048914 Bacteria 2044
148 Ga0496113_0111214 3300048916 Bacteria 2133
149 Ga0496121_0001543 3300048924 Bacteria 38548
150 Ga0496124_0199820 3300048927 Bacteria 1521
151 Ga0496126_0031724 3300048929 Bacteria 4986
152 Ga0496126_0465437 3300048929 Bacteria 1015
153 Ga0501031_0009340 3300049568 Bacteria 6375
154 Ga0501032_0002147 3300049569 Bacteria 15526
155 Ga0501033_0000060 3300049570 Bacteria 103159
156 Ga0501034_0000117 3300049571 Bacteria 144865
157 Ga0501036_0000188 3300049572 Bacteria 41101
158 Ga0501037_0000402 3300049573 Bacteria 36091
159 Ga0501038_0000540 3300049574 Bacteria 33178
160 Ga0501039_0000431 3300049575 Bacteria 30281
161 Ga0501042_0014849 3300049578 Bacteria 5321
162 Ga0501043_0002749 3300049579 Bacteria 14715
163 Ga0501046_0001915 3300049580 Bacteria 19766
164 Ga0501047_0000246 3300049581 Bacteria 64361
165 Ga0501048_0027796 3300049582 Bacteria 4107
166 Ga0501067_0000320 3300049583 Bacteria 26233
167 Ga0501068_0018821 3300049584 Bacteria 4001
168 Ga0501069_0005497 3300049585 Bacteria 6595
169 Ga0501070_0000779 3300049586 Bacteria 28961
170 Ga0501072_0004819 3300049588 Bacteria 10273
171 Ga0501073_0000093 3300049589 Bacteria 56882
172 Ga0501074_0000127 3300049590 Bacteria 38795
173 Ga0501074_0025477 3300049590 Bacteria 4296
174 Ga0501079_0001174 3300049741 Bacteria 18341
175 Ga0501080_0004375 3300049742 Bacteria 12547
176 Ga0501080_0016600 3300049742 Bacteria 6802
177 Ga0501083_0009493 3300049744 Bacteria 6872
178 Ga0501035_0002394 3300049822 Bacteria 18396
179 Ga0501044_0005195 3300049823 Bacteria 14487
180 Ga0501045_0033498 3300049824 Bacteria 3725
181 nmdc:mga03683_36311_c1 3300050489 Bacteria 2004
182 nmdc:mga03n38_17919_c1 3300050490 Bacteria 2783
183 nmdc:mga08y16_85066_c1 3300050511 Bacteria 3296
184 Ga0495612_0051239 3300053078 Bacteria 1696
185 Ga0495619_0248476 3300053085 Bacteria 1232
186 Ga0500578_0171419 3300053086 Bacteria 1342
187 Ga0500651_0006623 3300053093 Bacteria 6697
188 Ga0500641_0057636 3300053096 Bacteria 1611
189 Ga0500557_000254 3300053105 Bacteria 7674
190 Ga0500595_029419 3300053119 Bacteria 1863
191 Ga0500588_0094527 3300053146 Bacteria 1021
192 Ga0500661_007521 3300055283 Bacteria 2011
193 Ga0501082_0004139 3300060353 Bacteria 12672
194 2513655729 2513237096 Bacteria 8722461
195 2513697270 2513237101 Bacteria 7952346
196 2513862779 2513237137 Bacteria 9558895
197 2513916193 2513237145 Bacteria 8979722
198 2517890200 2517572143 Bacteria 9484767
199 2524538328 2524023228 Bacteria 10118060
200 2671121655 2667528175 Bacteria 7532676
201 2728752103 2728368998 Bacteria 8720350
202 2793067824 2791355197 Bacteria 8420563
203 2874606190 2874604998 Bacteria 7834745
204 2885379619 2885374607 Bacteria 8927485
205 2903755210 2903748898 Bacteria 9972761
206 2904692950 2904690495 Bacteria 9412302
207 2904710483
208 2906612036
209 2906636260 2906635258 Bacteria 8601019
210 2906663582 2906660503 Bacteria 8595048
211 2908740435 2908739725 Bacteria 8628932
212 2908758028 2908756301 Bacteria 8864324
213 2922389688 2922386360 Bacteria 7017218
214 2922427259
215 2935636293 2935630451 Bacteria 8169952
216 2941512924 2941507105 Bacteria 8166816
217 2941520774 2941515067 Bacteria 8166720
218 2941528789 2941523033 Bacteria 8169134
219 3005476437 3005474847 Bacteria 9259049
220 3005724049 3005718088 Bacteria 8283608
221 8006928015 8006926726 Bacteria 6749210
222 8006937794 8006933436 Bacteria 10410654
223 8006973056 8006964411 Bacteria 8966052
224 8006977822 8006973647 Bacteria 10679141
225 8006999086 8006994254 Bacteria 8309700
226 8019560857 8019555841 Bacteria 9642137
227 8019570938 8019565922 Bacteria 9639779
228 Ga0070695_100184943
229 JGI25165J46597_1011632
230 JGI25160J50197_1003414
231 Ga0070680_100181001
232 Ga0070674_100419468
233 Ga0070659_100114969
234 Ga0070667_100227670
235 Ga0070667_100468200
236 Ga0070714_100055785
237 Ga0070713_100023213
238 Ga0070663_100146544
239 Ga0068867_100045562
240 Ga0070679_100260238
241 Ga0070697_100559684
242 Ga0068853_100249733
243 Ga0070704_100277809
244 Ga0068855_100710709
245 Ga0068852_100018862
246 Ga0068861_100409530
247 Ga0081455_10047950
248 Ga0081455_10093071
249 Ga0070717_10009239
250 Ga0070717_10046152
251 Ga0070717_10398253
252 Ga0070717_10464221
253 Ga0075365_10217407
254 Ga0075365_10461873
255 Ga0075363_100043411
256 Ga0075370_10023238
257 Ga0075370_10068406
258 Ga0075428_100196589
259 Ga0068865_100131680
260 Ga0099822_1005624
261 Ga0105240_10132052
262 Ga0111539_10095304
263 Ga0105245_10270690
264 Ga0105238_10154964
265 Ga0105249_10769265
266 Ga0163162_10152841
267 Ga0209233_1014815
268 Ga0207707_10010682
269 Ga0207660_10053306
270 Ga0207649_10145359
271 Ga0207652_10119852
272 Ga0207646_10299312
273 Ga0207700_10100867
274 Ga0207664_10276861
275 Ga0207670_10100356
276 Ga0207668_10551426
277 Ga0207658_10050397
278 Ga0207678_10100354
279 Ga0207678_10184038
280 Ga0207675_100058504
281 Ga0209589_1000007
282 Ga0209489_100008
283 Ga0209700_100009
284 Ga0207428_10062538
285 Ga0268266_10411113
286 Ga0268265_10256841
287 Ga0268265_10330402
288 Ga0265337_1003522
289 Ga0265334_10068362
290 Ga0307515_10022977
291 Ga0265770_1000637
292 Ga0265760_10000085
293 Ga0265332_10056552
294 Ga0265332_10060851
295 Ga0265320_10000183
296 Ga0265340_10017438
297 Ga0307509_10313405
298 Ga0307408_100631864
299 Ga0307508_10138617
300 Ga0265314_10015154
301 Ga0265342_10007598
302 Ga0307416_100542714
303 Ga0315911_1000012
304 Ga0316215_1002807
305 Ga0373923_0018603
306 Ga0373936_0023461
307 Ga0373957_0199325
308 Ga0373943_0001715
309 Ga0373946_0008900
310 Ga0373924_0017386
311 Ga0373935_0002990
312 Ga0373927_0001230
313 Ga0373947_0001223
314 Ga0373947_0019221
315 Ga0373937_0077721
316 Ga0372808_000223
317 Ga0373925_0002121
318 Ga0373925_0327253
319 Ga0436361_0734949
320 Ga0466959_0011151
321 Ga0495603_0000667
322 Ga0495629_0000283
323 Ga0495638_0253572
324 Ga0495641_0011873
325 Ga0495651_0098740
326 Ga0495651_0263830
327 Ga0495653_0042720
328 Ga0495580_0002411
329 Ga0495582_0000555
330 Ga0495639_0000423
331 Ga0495662_0009557
332 Ga0495664_0028448
333 Ga0495584_0205422
334 Ga0495594_0001986
335 Ga0495606_0095241
336 Ga0495618_0071749
337 Ga0495628_0028687
338 Ga0495628_0310614
339 Ga0495630_0016818
340 Ga0495652_0079975
341 Ga0495652_0196271
342 Ga0495652_0245817
343 Ga0495665_0001096
344 Ga0495645_0023752
345 Ga0495622_0003133
346 Ga0495656_0056979
347 Ga0495634_0004577
348 Ga0495634_0049860
349 Ga0495635_0002530
350 Ga0495659_0079942
351 Ga0495588_0023415
352 Ga0495657_0211016
353 Ga0495623_0029359
354 Ga0495646_0203324
355 Ga0495647_0001720
356 Ga0495658_0002218
357 Ga0495669_0012048
358 Ga0495613_0001910
359 Ga0495613_0135553
360 Ga0495624_0001800
361 Ga0495581_0000346
362 Ga0495604_0097929
363 Ga0495674_0018654
364 Ga0495674_0225533
365 Ga0495676_0012424
366 Ga0495683_0192719
367 Ga0495684_0022580
368 Ga0495593_0001297
369 Ga0496102_0055855
370 Ga0496102_0216074
371 Ga0496104_0125621
372 Ga0496104_0414046
373 Ga0496105_0405121
374 Ga0496111_0108505
375 Ga0496113_0111214
376 Ga0496121_0001543
377 Ga0496124_0199820
378 Ga0496126_0031724
379 Ga0496126_0465437
380 Ga0501031_0009340
381 Ga0501032_0002147
382 Ga0501033_0000060
383 Ga0501034_0000117
384 Ga0501036_0000188
385 Ga0501037_0000402
386 Ga0501038_0000540
387 Ga0501039_0000431
388 Ga0501042_0014849
389 Ga0501043_0002749
390 Ga0501046_0001915
391 Ga0501047_0000246
392 Ga0501048_0027796
393 Ga0501067_0000320
394 Ga0501068_0018821
395 Ga0501069_0005497
396 Ga0501070_0000779
397 Ga0501072_0004819
398 Ga0501073_0000093
399 Ga0501074_0000127
400 Ga0501074_0025477
401 Ga0501079_0001174
402 Ga0501080_0004375
403 Ga0501080_0016600
404 Ga0501083_0009493
405 Ga0501035_0002394
406 Ga0501044_0005195
407 Ga0501045_0033498
408 nmdc:mga03683_36311_c1
409 nmdc:mga03n38_17919_c1
410 nmdc:mga08y16_85066_c1
411 Ga0495612_0051239
412 Ga0495619_0248476
413 Ga0500578_0171419
414 Ga0500651_0006623
415 Ga0500641_0057636
416 Ga0500557_000254
417 Ga0500595_029419
418 Ga0500588_0094527
419 Ga0500661_007521
420 Ga0501082_0004139
421 2513655729
422 2513697270
423 2513862779
424 2513916193
425 2517890200
426 2524538328
427 2671121655
428 2728752103
429 2793067824
430 2874606190
431 2885379619
432 2903755210
433 2904692950
434 2904710483
435 2906612036
436 2906636260
437 2906663582
438 2908740435
439 2908758028
440 2922389688
441 2922427259
442 2935636293
443 2941512924
444 2941520774
445 2941528789
446 3005476437
447 3005724049
448 8006928015
449 8006937794
450 8006973056
451 8006977822
452 8006999086
453 8019560857
454 8019570938

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

38

232

0.98

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

44

269

0.93

PF08659

KR

KR domain

39

215

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ew8-assembly1.cif.gz_D crystal structure of the (s)-specific 1-phenylethanol dehydrogenase of the denitrifying bacterium strain ebn1 0.9475 2 188
5g4k-assembly1.cif.gz_A-2 phloroglucinol reductase from clostridium sp. apo-form 0.9407 3 188
5tii-assembly2.cif.gz_G comprehensive analysis of a novel ketoreductase for pentangular polyphenol biosynthesis 0.9342 4 189
2bel-assembly2.cif.gz_C structure of human 11-beta-hydroxysteroid dehydrogenase in complex with nadp and carbenoxolone 0.9319 4 245
3tfo-assembly1.cif.gz_B crystal structure of a putative 3-oxoacyl-(acyl-carrier-protein) reductase from sinorhizobium meliloti 0.9311 7 246
ID Description Score Start End Superfamily
af_P9WGP9_1_269_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.957 1 272 3.40.50.720
af_P9WGP9_1_269_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9501 1 272 3.40.50.720
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9485 4 197 3.40.50.720
af_A0A0N7KIR0_69_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.945 3 162 3.40.50.720
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9438 4 187 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3B1AFW3-F1-model_v4 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.9677 4 195 GO:0004316
AF-X0YIU3-F1-model_v4 Short-chain dehydrogenase/reductase SDR 0.9602 5 176
AF-A0A2Z6LZR2-F1-model_v4 Uncharacterized protein 0.9577 5 94 GO:0005829
GO:0016020
GO:0016491
AF-A0A3D2MDQ6-F1-model_v4 Short-chain dehydrogenase 0.9574 2 181 GO:0016491
AF-A0A7X3R6H7-F1-model_v4 SDR family oxidoreductase 0.957 1 197 GO:0016020
GO:0016491

Map