F339606

General Info

Members Datasets Scaffolds Average Seq Length
227 113 454 239

Family's Representative Sequence

Representative Sequence 3300005344|Ga0070661_100236169|Ga0070661_1002361692
Length 267
Sequence MTEFSAELTGTFILILLGTSVVANTILKGTKGNNGGWIVITTGWALAVFAGVVIAAPYSGAHLNPAVTVALAIAGKFAWSKVGSFILAQCIGAILGAFVTWLVYRDHFNATEDAGVQLAVFSTSPAIRNTVFNLLSEIVGTFVLIFVIFYFTDPQINVRELDSQGKMVQSPQSANVRPSDEEHKTPIGMGSLGALPVTLLVWAIGLSLGGTTGYAINPARDLGPRIVHTLIPMRHKGASGWGYAWVPVIGPFIGGAIAALLFMWLKL

Samples

Sample ID Description Type Environment
1 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
40 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
64 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
65 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
66 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
67 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
68 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
69 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
78 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
79 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
80 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
88 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
89 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
90 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
91 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
96 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
97 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
106 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
107 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
108 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
109 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
110 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
111 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
112 2914759650 Rhizosphaericola mali Isolate Rhizosphere
113 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.8
Metatranscriptomes 0
Isolates 2.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.2
Nodule 0
Rhizoplane 3.52
Rhizosphere 86.34
Stem 0
Stem Tuber 0
Unclassified 5.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070661_100236169 3300005344 Bacteria 1406
2 Ga0065714_10002433 3300005288 Bacteria 17794
3 Ga0070658_10030137 3300005327 Bacteria 4360
4 Ga0070658_10150198 3300005327 Bacteria 1950
5 Ga0070658_10152804 3300005327 Bacteria 1933
6 Ga0070658_10589168 3300005327 Bacteria 963
7 Ga0070670_100048229 3300005331 Bacteria 3665
8 Ga0070666_10039555 3300005335 Bacteria 3144
9 Ga0070680_100118245 3300005336 Bacteria 2210
10 Ga0070680_100118364 3300005336 Bacteria 2209
11 Ga0070682_100268986 3300005337 Bacteria 1237
12 Ga0070660_100001934 3300005339 Bacteria 14278
13 Ga0070660_100006997 3300005339 Bacteria 7831
14 Ga0070659_100009566 3300005366 Bacteria 7123
15 Ga0070659_100047069 3300005366 Bacteria 3382
16 Ga0070659_100091078 3300005366 Bacteria 2444
17 Ga0070659_100110835 3300005366 Bacteria 2215
18 Ga0070681_10095619 3300005458 Bacteria 2919
19 Ga0070681_10191912 3300005458 Bacteria 1962
20 Ga0070679_100007939 3300005530 Bacteria 9960
21 Ga0070679_100017268 3300005530 Bacteria 6981
22 Ga0070679_100032384 3300005530 Bacteria 5170
23 Ga0070679_100064581 3300005530 Bacteria 3648
24 Ga0070679_100335741 3300005530 Bacteria 1459
25 Ga0070684_100762839 3300005535 Bacteria 903
26 Ga0068853_100000545 3300005539 Bacteria 25665
27 Ga0068853_100045167 3300005539 Bacteria 3773
28 Ga0068853_100050266 3300005539 Unclassified 3586
29 Ga0068853_100090784 3300005539 Bacteria 2685
30 Ga0068853_100782447 3300005539 Bacteria 913
31 Ga0070693_100197357 3300005547 Bacteria 1305
32 Ga0068855_100014301 3300005563 Bacteria 9556
33 Ga0068855_100016896 3300005563 Bacteria 8775
34 Ga0068855_100059462 3300005563 Bacteria 4471
35 Ga0068855_100070206 3300005563 Bacteria 4076
36 Ga0068855_100336681 3300005563 Unclassified 1665
37 Ga0068855_100564382 3300005563 Bacteria 1231
38 Ga0070664_100171602 3300005564 Bacteria 1924
39 Ga0070664_100276599 3300005564 Bacteria 1513
40 Ga0068857_100003754 3300005577 Bacteria 12764
41 Ga0068857_100159744 3300005577 Bacteria 2045
42 Ga0068857_100164373 3300005577 Bacteria 2015
43 Ga0068854_100136186 3300005578 Bacteria 1880
44 Ga0068854_100203923 3300005578 Bacteria 1556
45 Ga0068856_100023307 3300005614 Bacteria 6018
46 Ga0068856_100046913 3300005614 Bacteria 4256
47 Ga0068856_100050089 3300005614 Bacteria 4117
48 Ga0068852_100001189 3300005616 Bacteria 17258
49 Ga0068852_100005306 3300005616 Bacteria 9199
50 Ga0068860_100021798 3300005843 Bacteria 6198
51 Ga0105240_10021676 3300009093 Bacteria 8542
52 Ga0105240_10068355 3300009093 Bacteria 4400
53 Ga0105241_10614389 3300009174 Bacteria 983
54 Ga0105238_10004281 3300009551 Bacteria 14169
55 Ga0105239_10011806 3300010375 Bacteria 9748
56 Ga0105239_10231030 3300010375 Bacteria 2075
57 Ga0157373_10009240 3300013100 Bacteria 7288
58 Ga0157373_10050374 3300013100 Bacteria 2965
59 Ga0157373_10078216 3300013100 Bacteria 2333
60 Ga0157373_10146141 3300013100 Bacteria 1663
61 Ga0157373_10198901 3300013100 Unclassified 1413
62 Ga0157371_10001876 3300013102 Bacteria 21018
63 Ga0157371_10016179 3300013102 Bacteria 5573
64 Ga0157371_10016887 3300013102 Bacteria 5435
65 Ga0157371_10017748 3300013102 Bacteria 5280
66 Ga0157371_10027680 3300013102 Bacteria 4110
67 Ga0157371_10038923 3300013102 Bacteria 3401
68 Ga0157371_10044357 3300013102 Bacteria 3166
69 Ga0157371_10233506 3300013102 Bacteria 1322
70 Ga0157370_10018622 3300013104 Bacteria 6981
71 Ga0157370_10024964 3300013104 Bacteria 5915
72 Ga0157370_10107911 3300013104 Bacteria 2604
73 Ga0157370_10243280 3300013104 Bacteria 1664
74 Ga0157369_10004281 3300013105 Bacteria 16868
75 Ga0157369_10025783 3300013105 Bacteria 6522
76 Ga0157369_10143007 3300013105 Bacteria 2530
77 Ga0157374_10001630 3300013296 Bacteria 18779
78 Ga0157374_10010056 3300013296 Bacteria 8123
79 Ga0157374_10188340 3300013296 Bacteria 2018
80 Ga0157374_10199103 3300013296 Bacteria 1961
81 Ga0163162_10646709 3300013306 Bacteria 1181
82 Ga0157372_10001758 3300013307 Bacteria 23488
83 Ga0157372_10018512 3300013307 Bacteria 7488
84 Ga0157372_10020169 3300013307 Bacteria 7187
85 Ga0157372_10062275 3300013307 Bacteria 4180
86 Ga0157372_10137003 3300013307 Bacteria 2819
87 Ga0157372_10144188 3300013307 Bacteria 2746
88 Ga0157372_10146986 3300013307 Bacteria 2718
89 Ga0157372_10150592 3300013307 Bacteria 2685
90 Ga0157372_10201665 3300013307 Bacteria 2305
91 Ga0157372_10828565 3300013307 Bacteria 1074
92 Ga0157375_10360530 3300013308 Bacteria 1620
93 Ga0182008_10000522 3300014497 Bacteria 28851
94 Ga0157379_10460243 3300014968 Bacteria 1175
95 Ga0213872_10001135 3300021361 Bacteria 18210
96 Ga0213876_10001662 3300021384 Bacteria 13571
97 Ga0213876_10033209 3300021384 Bacteria 2721
98 Ga0213876_10049261 3300021384 Bacteria 2226
99 Ga0213875_10015408 3300021388 Bacteria 3720
100 Ga0213875_10025334 3300021388 Bacteria 2826
101 Ga0213875_10035515 3300021388 Bacteria 2351
102 Ga0213871_10020701 3300021441 Bacteria 1633
103 Ga0209025_1014791 3300025294 Bacteria 4766
104 Ga0207680_10049094 3300025903 Bacteria 2510
105 Ga0207705_10026247 3300025909 Bacteria 4155
106 Ga0207705_10115525 3300025909 Bacteria 1986
107 Ga0207705_10389728 3300025909 Bacteria 1077
108 Ga0207705_10461514 3300025909 Bacteria 985
109 Ga0207707_10026862 3300025912 Bacteria 5031
110 Ga0207695_10011311 3300025913 Bacteria 10819
111 Ga0207695_10032322 3300025913 Bacteria 5727
112 Ga0207663_10087064 3300025916 Bacteria 2062
113 Ga0207660_10031358 3300025917 Bacteria 3659
114 Ga0207660_10042988 3300025917 Bacteria 3174
115 Ga0207657_10007892 3300025919 Bacteria 10857
116 Ga0207657_10009577 3300025919 Bacteria 9725
117 Ga0207657_10010232 3300025919 Bacteria 9369
118 Ga0207657_10292076 3300025919 Bacteria 1292
119 Ga0207649_10289577 3300025920 Bacteria 1194
120 Ga0207652_10000023 3300025921 Bacteria 158556
121 Ga0207652_10014329 3300025921 Bacteria 6420
122 Ga0207652_10140131 3300025921 Bacteria 2162
123 Ga0207652_10417429 3300025921 Bacteria 1210
124 Ga0207694_10248377 3300025924 Bacteria 1455
125 Ga0207690_10013411 3300025932 Bacteria 4924
126 Ga0207690_10091809 3300025932 Bacteria 2147
127 Ga0207690_10260853 3300025932 Bacteria 1342
128 Ga0207690_10353762 3300025932 Bacteria 1162
129 Ga0207661_10349941 3300025944 Bacteria 1333
130 Ga0207679_10065243 3300025945 Bacteria 2724
131 Ga0207679_10418840 3300025945 Bacteria 1182
132 Ga0207667_10000449 3300025949 Bacteria 55183
133 Ga0207667_10019091 3300025949 Bacteria 7665
134 Ga0207667_10051296 3300025949 Bacteria 4350
135 Ga0207667_10056960 3300025949 Bacteria 4104
136 Ga0207667_10063754 3300025949 Bacteria 3850
137 Ga0207667_10084034 3300025949 Bacteria 3296
138 Ga0207667_10458090 3300025949 Unclassified 1296
139 Ga0207640_10026861 3300025981 Bacteria 3501
140 Ga0207639_10028663 3300026041 Bacteria 4067
141 Ga0207639_10070755 3300026041 Bacteria 2726
142 Ga0207639_10103383 3300026041 Bacteria 2308
143 Ga0207639_10404014 3300026041 Bacteria 1231
144 Ga0207678_10038328 3300026067 Bacteria 4164
145 Ga0207702_10004902 3300026078 Bacteria 11776
146 Ga0207702_10078106 3300026078 Bacteria 2865
147 Ga0207702_10095884 3300026078 Bacteria 2608
148 Ga0207674_10007385 3300026116 Bacteria 12801
149 Ga0207674_10027315 3300026116 Bacteria 6040
150 Ga0207674_10318557 3300026116 Bacteria 1504
151 Ga0207698_10494342 3300026142 Bacteria 1189
152 Ga0207698_10755295 3300026142 Unclassified 972
153 Ga0209371_1004889 3300027312 Bacteria 5591
154 Ga0268264_10018938 3300028381 Bacteria 5628
155 Ga0307515_10103192 3300028794 Bacteria 3420
156 Ga0268256_1004678 3300030500 Bacteria 5591
157 Ga0316177_1194729 3300030731 Bacteria 6545
158 Ga0316183_1055730 3300030742 Bacteria 30787
159 Ga0316181_1005186 3300030744 Bacteria 15670
160 Ga0307414_10064712 3300032004 Bacteria 2605
161 Ga0307414_10821739 3300032004 Bacteria 848
162 Ga0316574_0222071 3300035398 Bacteria 1210
163 Ga0395899_0001228 3300037312 Bacteria 22422
164 Ga0395899_0215131 3300037312 Unclassified 1334
165 Ga0395900_0001708 3300037418 Bacteria 25457
166 Ga0395900_0120698 3300037418 Bacteria 2689
167 Ga0395900_0145956 3300037418 Bacteria 2419
168 Ga0395900_0246992 3300037418 Bacteria 1787
169 Ga0395900_0314442 3300037418 Bacteria 1548
170 Ga0395900_0368073 3300037418 Bacteria 1407
171 Ga0395900_0541796 3300037418 Bacteria 1109
172 Ga0395898_0000480 3300037466 Bacteria 79611
173 Ga0395898_0011167 3300037466 Bacteria 9352
174 Ga0395898_0169443 3300037466 Unclassified 2087
175 Ga0395905_0287664 3300037471 Bacteria 1530
176 Ga0436364_0276308 3300037853 Bacteria 4470
177 Ga0436364_0871666 3300037853 Bacteria 5903
178 Ga0436364_1059268 3300037853 Bacteria 1776
179 Ga0436364_1077744 3300037853 Unclassified 1216
180 Ga0436364_1338898 3300037853 Bacteria 44672
181 Ga0436364_1489568 3300037853 Bacteria 6943
182 Ga0395901_0068946 3300038443 Bacteria 3683
183 Ga0395901_0129378 3300038443 Bacteria 2653
184 Ga0436365_0443285 3300039437 Bacteria 33651
185 Ga0436365_1005790 3300039437 Bacteria 4279
186 Ga0436365_1808920 3300039437 Bacteria 1563
187 Ga0436360_0002112 3300039438 Bacteria 1366
188 Ga0436360_1324229 3300039438 Bacteria 1820
189 Ga0436363_0653005 3300039450 Unclassified 1205
190 Ga0436362_0149416 3300039453 Unclassified 1988
191 Ga0451793_0521736 3300041452 Bacteria 990
192 Ga0451577_0212344 3300042876 Bacteria 1748
193 Ga0466966_0091767 3300044684 Bacteria 1885
194 Ga0453684_0328299 3300044712 Unclassified 1731
195 Ga0466957_0326013 3300044842 Bacteria 1037
196 Ga0466959_0013781 3300045049 Bacteria 5870
197 Ga0466958_0098977 3300045836 Bacteria 1811
198 Ga0495650_0131830 3300046471 Bacteria 911
199 Ga0495583_0178114 3300046506 Bacteria 871
200 Ga0495633_0000152 3300046558 Bacteria 91044
201 Ga0495625_0111846 3300046660 Bacteria 1866
202 Ga0496100_0278048 3300048903 Bacteria 1247
203 Ga0496101_0084576 3300048904 Bacteria 2350
204 Ga0496105_0307172 3300048908 Bacteria 1274
205 Ga0496112_0016865 3300048915 Bacteria 6853
206 Ga0496112_0037977 3300048915 Bacteria 4702
207 Ga0496113_0424807 3300048916 Bacteria 1068
208 Ga0496115_0014839 3300048918 Bacteria 5909
209 Ga0501032_0097738 3300049569 Unclassified 1946
210 Ga0501033_0323779 3300049570 Bacteria 1083
211 Ga0501034_0093270 3300049571 Bacteria 3007
212 Ga0501038_0177691 3300049574 Bacteria 1720
213 Ga0501043_0055954 3300049579 Bacteria 3099
214 Ga0501070_0170930 3300049586 Bacteria 1790
215 Ga0501070_0243731 3300049586 Bacteria 1471
216 Ga0501035_0015292 3300049822 Bacteria 7081
217 Ga0501035_0101924 3300049822 Bacteria 2519
218 Ga0501044_0159719 3300049823 Bacteria 2232
219 nmdc:mga0k408_37256_c1 3300050493 Bacteria 2792
220 Ga0500644_0000110 3300053088 Bacteria 52203
221 Ga0500651_0004118 3300053093 Bacteria 8102
222 Ga0500622_0001089 3300053156 Bacteria 22595
223 2842907051 2842903701 Bacteria 6986368
224 2896320008 2896317667 Bacteria 4606601
225 2910245771 2910245624 Bacteria 6935613
226 2914763398 2914759650 Bacteria 4701441
227 2919414775 2919414237 Bacteria 5429133
228 Ga0070661_100236169
229 Ga0065714_10002433
230 Ga0070658_10030137
231 Ga0070658_10150198
232 Ga0070658_10152804
233 Ga0070658_10589168
234 Ga0070670_100048229
235 Ga0070666_10039555
236 Ga0070680_100118245
237 Ga0070680_100118364
238 Ga0070682_100268986
239 Ga0070660_100001934
240 Ga0070660_100006997
241 Ga0070659_100009566
242 Ga0070659_100047069
243 Ga0070659_100091078
244 Ga0070659_100110835
245 Ga0070681_10095619
246 Ga0070681_10191912
247 Ga0070679_100007939
248 Ga0070679_100017268
249 Ga0070679_100032384
250 Ga0070679_100064581
251 Ga0070679_100335741
252 Ga0070684_100762839
253 Ga0068853_100000545
254 Ga0068853_100045167
255 Ga0068853_100050266
256 Ga0068853_100090784
257 Ga0068853_100782447
258 Ga0070693_100197357
259 Ga0068855_100014301
260 Ga0068855_100016896
261 Ga0068855_100059462
262 Ga0068855_100070206
263 Ga0068855_100336681
264 Ga0068855_100564382
265 Ga0070664_100171602
266 Ga0070664_100276599
267 Ga0068857_100003754
268 Ga0068857_100159744
269 Ga0068857_100164373
270 Ga0068854_100136186
271 Ga0068854_100203923
272 Ga0068856_100023307
273 Ga0068856_100046913
274 Ga0068856_100050089
275 Ga0068852_100001189
276 Ga0068852_100005306
277 Ga0068860_100021798
278 Ga0105240_10021676
279 Ga0105240_10068355
280 Ga0105241_10614389
281 Ga0105238_10004281
282 Ga0105239_10011806
283 Ga0105239_10231030
284 Ga0157373_10009240
285 Ga0157373_10050374
286 Ga0157373_10078216
287 Ga0157373_10146141
288 Ga0157373_10198901
289 Ga0157371_10001876
290 Ga0157371_10016179
291 Ga0157371_10016887
292 Ga0157371_10017748
293 Ga0157371_10027680
294 Ga0157371_10038923
295 Ga0157371_10044357
296 Ga0157371_10233506
297 Ga0157370_10018622
298 Ga0157370_10024964
299 Ga0157370_10107911
300 Ga0157370_10243280
301 Ga0157369_10004281
302 Ga0157369_10025783
303 Ga0157369_10143007
304 Ga0157374_10001630
305 Ga0157374_10010056
306 Ga0157374_10188340
307 Ga0157374_10199103
308 Ga0163162_10646709
309 Ga0157372_10001758
310 Ga0157372_10018512
311 Ga0157372_10020169
312 Ga0157372_10062275
313 Ga0157372_10137003
314 Ga0157372_10144188
315 Ga0157372_10146986
316 Ga0157372_10150592
317 Ga0157372_10201665
318 Ga0157372_10828565
319 Ga0157375_10360530
320 Ga0182008_10000522
321 Ga0157379_10460243
322 Ga0213872_10001135
323 Ga0213876_10001662
324 Ga0213876_10033209
325 Ga0213876_10049261
326 Ga0213875_10015408
327 Ga0213875_10025334
328 Ga0213875_10035515
329 Ga0213871_10020701
330 Ga0209025_1014791
331 Ga0207680_10049094
332 Ga0207705_10026247
333 Ga0207705_10115525
334 Ga0207705_10389728
335 Ga0207705_10461514
336 Ga0207707_10026862
337 Ga0207695_10011311
338 Ga0207695_10032322
339 Ga0207663_10087064
340 Ga0207660_10031358
341 Ga0207660_10042988
342 Ga0207657_10007892
343 Ga0207657_10009577
344 Ga0207657_10010232
345 Ga0207657_10292076
346 Ga0207649_10289577
347 Ga0207652_10000023
348 Ga0207652_10014329
349 Ga0207652_10140131
350 Ga0207652_10417429
351 Ga0207694_10248377
352 Ga0207690_10013411
353 Ga0207690_10091809
354 Ga0207690_10260853
355 Ga0207690_10353762
356 Ga0207661_10349941
357 Ga0207679_10065243
358 Ga0207679_10418840
359 Ga0207667_10000449
360 Ga0207667_10019091
361 Ga0207667_10051296
362 Ga0207667_10056960
363 Ga0207667_10063754
364 Ga0207667_10084034
365 Ga0207667_10458090
366 Ga0207640_10026861
367 Ga0207639_10028663
368 Ga0207639_10070755
369 Ga0207639_10103383
370 Ga0207639_10404014
371 Ga0207678_10038328
372 Ga0207702_10004902
373 Ga0207702_10078106
374 Ga0207702_10095884
375 Ga0207674_10007385
376 Ga0207674_10027315
377 Ga0207674_10318557
378 Ga0207698_10494342
379 Ga0207698_10755295
380 Ga0209371_1004889
381 Ga0268264_10018938
382 Ga0307515_10103192
383 Ga0268256_1004678
384 Ga0316177_1194729
385 Ga0316183_1055730
386 Ga0316181_1005186
387 Ga0307414_10064712
388 Ga0307414_10821739
389 Ga0316574_0222071
390 Ga0395899_0001228
391 Ga0395899_0215131
392 Ga0395900_0001708
393 Ga0395900_0120698
394 Ga0395900_0145956
395 Ga0395900_0246992
396 Ga0395900_0314442
397 Ga0395900_0368073
398 Ga0395900_0541796
399 Ga0395898_0000480
400 Ga0395898_0011167
401 Ga0395898_0169443
402 Ga0395905_0287664
403 Ga0436364_0276308
404 Ga0436364_0871666
405 Ga0436364_1059268
406 Ga0436364_1077744
407 Ga0436364_1338898
408 Ga0436364_1489568
409 Ga0395901_0068946
410 Ga0395901_0129378
411 Ga0436365_0443285
412 Ga0436365_1005790
413 Ga0436365_1808920
414 Ga0436360_0002112
415 Ga0436360_1324229
416 Ga0436363_0653005
417 Ga0436362_0149416
418 Ga0451793_0521736
419 Ga0451577_0212344
420 Ga0466966_0091767
421 Ga0453684_0328299
422 Ga0466957_0326013
423 Ga0466959_0013781
424 Ga0466958_0098977
425 Ga0495650_0131830
426 Ga0495583_0178114
427 Ga0495633_0000152
428 Ga0495625_0111846
429 Ga0496100_0278048
430 Ga0496101_0084576
431 Ga0496105_0307172
432 Ga0496112_0016865
433 Ga0496112_0037977
434 Ga0496113_0424807
435 Ga0496115_0014839
436 Ga0501032_0097738
437 Ga0501033_0323779
438 Ga0501034_0093270
439 Ga0501038_0177691
440 Ga0501043_0055954
441 Ga0501070_0170930
442 Ga0501070_0243731
443 Ga0501035_0015292
444 Ga0501035_0101924
445 Ga0501044_0159719
446 nmdc:mga0k408_37256_c1
447 Ga0500644_0000110
448 Ga0500651_0004118
449 Ga0500622_0001089
450 2842907051
451 2896320008
452 2910245771
453 2914763398
454 2919414775

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00230

MIP

Major intrinsic protein

178

262

0.93

PF00230

MIP

Major intrinsic protein

1

168

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w7r-assembly1.cif.gz_A high resolution structure of a fish aquaporin reveals a novel extracellular fold. 0.8858 2 238
7nl4-assembly1.cif.gz_B osnip2;1 silicon transporter from rice 0.8845 3 243
2d57-assembly1.cif.gz_A double layered 2d crystal structure of aquaporin-4 (aqp4m23) at 3.2 a resolution by electron crystallography 0.884 2 241
2b5f-assembly1.cif.gz_B crystal structure of the spinach aquaporin sopip2;1 in an open conformation to 3.9 resolution 0.8839 3 238
7w7s-assembly1.cif.gz_A high resolution structure of a fish aquaporin reveals a novel extracellular fold. 0.8783 2 238
ID Description Score Start End Superfamily
af_Q2FYZ6_1_239_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.9507 1 238 1.20.1080.10
af_Q7Z138_18_164_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.9369 3 110 1.20.1080.10
af_Q2FYZ6_1_239_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.9118 1 238 1.20.1080.10
af_D3DMU9_11_244_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.8946 2 238 1.20.1080.10
af_Q9V5Z7_14_242_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.8937 4 238 1.20.1080.10
ID Description Score Start End GO Terms
AF-A0A519URG3-F1-model_v4 Aquaporin family protein 0.9882 1 149 GO:0005886
GO:0015254
AF-A0A3B8MV92-F1-model_v4 Aquaporin 0.9881 2 113 GO:0005886
GO:0015254
AF-A0A7D8UDW1-F1-model_v4 Aquaporin family protein 0.9846 1 152 GO:0005886
GO:0015254
AF-A0A7W1CB09-F1-model_v4 Aquaporin family protein 0.9819 1 140 GO:0005886
GO:0015254
AF-K0Z8A9-F1-model_v4 Glycerol uptake facilitator protein 0.9809 3 150 GO:0005886
GO:0015254

Map