F339367

General Info

Members Datasets Scaffolds Average Seq Length
226 180 213 296

Family's Representative Sequence

Representative Sequence 3300053156|Ga0500622_0026988|Ga0500622_0026988_762_1796
Length 344
Sequence LKIETSTFVRRARPNNPGFSVSPFTTKGDAMDRRSFLTAAVAAVSSDGLGPLPPAASRDALRFRSERRRLNLPQGRIAYADRGAGPVALFVHGFPLNGYQWRGALDRLSGQRRCLAPDLMGLGYTDVSNTQDLSPQAQSDMLVALLDGLSIDTVDLIANDSGGTIAQLFAAQHPPRVRTMLLTNCDVHENSPPPQMAGSIAKARAGVYDQKIALHLEDRVYARSASGIGGAAYIDPTSFSDDVIEYYLRPLVASPERRSQLNRYLAACEPNPLLAIEAALRRSPIPTRMVWGTADPLFPVRWAEWLDRTLPKSRGIRLVERGKLFWPEERPDVLASEAKALWAG

Samples

Sample ID Description Type Environment
1 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
2 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
3 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
4 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
5 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
6 2643221584 Caulobacter sp. Root656 Isolate Unclassified
7 2643221593 Lysobacter sp. Root690 Isolate Unclassified
8 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
9 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
10 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
11 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
12 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
13 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
14 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
15 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
16 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
19 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
20 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
21 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
22 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
23 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
24 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
25 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
32 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
33 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
34 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
35 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
36 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
37 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
38 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
39 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
40 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
41 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
42 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
43 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
53 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
54 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
55 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
56 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
57 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
58 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
59 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
60 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
61 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
62 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
63 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
75 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
76 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
77 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
84 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
85 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
86 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
88 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
90 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
124 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
126 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
127 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
128 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
133 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
134 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
135 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
136 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
137 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
138 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
139 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
140 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
141 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
142 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
143 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
146 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
174 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
175 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
176 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
177 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
178 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
179 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.81
Metatranscriptomes 0.44
Isolates 5.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.14
Nodule 0
Rhizoplane 0.88
Rhizosphere 69.47
Stem 0
Stem Tuber 0
Unclassified 11.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1004100 3300002773 Bacteria 4713
2 JGI25151J46595_10000692 3300003187 Bacteria 28411
3 JGI25153J46596_10001218 3300003215 Bacteria 15527
4 JGI25153J46596_10019953 3300003215 Bacteria 2549
5 rootL2_10078996 3300003322 Bacteria 5272
6 rootH1_10064705 3300003323 Bacteria 4095
7 Ga0055526_1010294 3300003771 Bacteria 4370
8 Ga0055536_1000029 3300003781 Bacteria 157375
9 Ga0055536_1000092 3300003781 Bacteria 77375
10 Ga0055530_10000363 3300003791 Bacteria 41018
11 Ga0070676_10096447 3300005328 Bacteria 1820
12 Ga0068869_100092143 3300005334 Bacteria 2281
13 Ga0070689_100039867 3300005340 Bacteria 3598
14 Ga0070692_10121957 3300005345 Bacteria 1455
15 Ga0070668_100293869 3300005347 Bacteria 1361
16 Ga0070669_100009080 3300005353 Bacteria 7086
17 Ga0070669_100019518 3300005353 Bacteria 4842
18 Ga0070673_100041241 3300005364 Bacteria 3548
19 Ga0070659_100168507 3300005366 Bacteria 1793
20 Ga0070667_100198254 3300005367 Bacteria 1781
21 Ga0070709_10029145 3300005434 Bacteria 3298
22 Ga0070714_100362864 3300005435 Bacteria 1362
23 Ga0070713_100013460 3300005436 Bacteria 6042
24 Ga0070713_100095369 3300005436 Bacteria 2566
25 Ga0070713_100312333 3300005436 Bacteria 1450
26 Ga0070710_10150944 3300005437 Bacteria 1433
27 Ga0070701_10079064 3300005438 Bacteria 1776
28 Ga0070694_100096161 3300005444 Bacteria 2087
29 Ga0070678_100051280 3300005456 Bacteria 2990
30 Ga0070706_100010373 3300005467 Bacteria 8653
31 Ga0070698_100016499 3300005471 Bacteria 7793
32 Ga0070699_100513720 3300005518 Bacteria 1089
33 Ga0070697_100092458 3300005536 Bacteria 2503
34 Ga0068853_100009461 3300005539 Bacteria 7852
35 Ga0070672_100038493 3300005543 Bacteria 3654
36 Ga0070672_100104423 3300005543 Bacteria 2302
37 Ga0070665_100000669 3300005548 Bacteria 46135
38 Ga0070665_100264446 3300005548 Bacteria 1721
39 Ga0068855_100048898 3300005563 Unclassified 4990
40 Ga0068857_100020670 3300005577 Bacteria 5793
41 Ga0068854_100109642 3300005578 Bacteria 2080
42 Ga0068852_100030357 3300005616 Bacteria 4448
43 Ga0068852_100063344 3300005616 Bacteria 3220
44 Ga0068852_100157215 3300005616 Bacteria 2119
45 Ga0068859_100213437 3300005617 Bacteria 2017
46 Ga0068870_10006240 3300005840 Bacteria 5245
47 Ga0068860_100098303 3300005843 Bacteria 2791
48 Ga0068860_100144890 3300005843 Bacteria 2285
49 Ga0068862_100012676 3300005844 Bacteria 6976
50 Ga0081455_10001706 3300005937 Bacteria 26586
51 Ga0070717_10054669 3300006028 Bacteria 3293
52 Ga0070717_10260135 3300006028 Bacteria 1535
53 Ga0075365_10195343 3300006038 Bacteria 1417
54 Ga0070715_10003709 3300006163 Bacteria 4908
55 Ga0070712_100010192 3300006175 Bacteria 5923
56 Ga0075362_10003192 3300006177 Bacteria 5675
57 Ga0075367_10007370 3300006178 Bacteria 5626
58 Ga0075366_10002185 3300006195 Bacteria 9986
59 Ga0075370_10000132 3300006353 Bacteria 25018
60 Ga0075370_10011745 3300006353 Bacteria 4609
61 Ga0075370_10067859 3300006353 Bacteria 2036
62 Ga0075428_100272962 3300006844 Bacteria 1819
63 Ga0075430_100143127 3300006846 Bacteria 1991
64 Ga0075434_100063482 3300006871 Bacteria 3676
65 Ga0075434_100198553 3300006871 Bacteria 2026
66 Ga0097620_100213424 3300006931 Bacteria 2017
67 Ga0099794_10000907 3300007265 Bacteria 9980
68 Ga0105240_10008057 3300009093 Bacteria 15158
69 Ga0105240_10040592 3300009093 Bacteria 5949
70 Ga0111539_10088752 3300009094 Bacteria 3633
71 Ga0111539_10100612 3300009094 Bacteria 3394
72 Ga0114129_10044791 3300009147 Bacteria 6223
73 Ga0114129_10317624 3300009147 Bacteria 2071
74 Ga0105241_10068707 3300009174 Bacteria 2746
75 Ga0105238_10621868 3300009551 Bacteria 1089
76 Ga0105249_10012283 3300009553 Bacteria 7546
77 Ga0105239_10000734 3300010375 Bacteria 46586
78 Ga0157373_10044443 3300013100 Bacteria 3171
79 Ga0157371_10011816 3300013102 Bacteria 6705
80 Ga0157370_10036261 3300013104 Bacteria 4787
81 Ga0157370_10132344 3300013104 Unclassified 2326
82 Ga0157369_10002781 3300013105 Bacteria 20894
83 Ga0157369_10077223 3300013105 Bacteria 3569
84 Ga0157372_10059597 3300013307 Bacteria 4270
85 Ga0157375_10255413 3300013308 Bacteria 1914
86 Ga0157380_10003721 3300014326 Bacteria 10487
87 Ga0157379_10038085 3300014968 Bacteria 4290
88 Ga0157376_10498362 3300014969 Bacteria 1196
89 Ga0182006_1006352 3300015261 Bacteria 5503
90 Ga0207425_1000849 3300025245 Bacteria 15044
91 Ga0207425_1002564 3300025245 Bacteria 6315
92 Ga0209129_1000124 3300025258 Bacteria 133610
93 Ga0209676_1000057 3300025292 Bacteria 361061
94 Ga0209025_1000069 3300025294 Bacteria 290193
95 Ga0209564_1000057 3300025295 Bacteria 340400
96 Ga0209758_1000214 3300025297 Bacteria 126364
97 Ga0209758_1005531 3300025297 Bacteria 9648
98 Ga0209050_1000096 3300025298 Bacteria 240109
99 Ga0209051_1001149 3300025303 Bacteria 24084
100 Ga0209257_1004880 3300025304 Bacteria 9907
101 Ga0209257_1013874 3300025304 Bacteria 3527
102 Ga0207642_10011169 3300025899 Bacteria 3192
103 Ga0207699_10003571 3300025906 Bacteria 7429
104 Ga0207654_10041879 3300025911 Bacteria 2589
105 Ga0207695_10013055 3300025913 Bacteria 9919
106 Ga0207695_10015994 3300025913 Bacteria 8806
107 Ga0207695_10039721 3300025913 Bacteria 5054
108 Ga0207693_10007968 3300025915 Bacteria 8702
109 Ga0207681_10005358 3300025923 Bacteria 7882
110 Ga0207681_10032174 3300025923 Bacteria 3432
111 Ga0207650_10298739 3300025925 Bacteria 1315
112 Ga0207700_10018679 3300025928 Bacteria 4665
113 Ga0207700_10585250 3300025928 Bacteria 992
114 Ga0207664_10029329 3300025929 Bacteria 4190
115 Ga0207670_10050872 3300025936 Bacteria 2779
116 Ga0207665_10004987 3300025939 Bacteria 8858
117 Ga0207665_10112781 3300025939 Bacteria 1912
118 Ga0207691_10005991 3300025940 Bacteria 11740
119 Ga0207689_10110097 3300025942 Unclassified 2263
120 Ga0207689_10417940 3300025942 Bacteria 1119
121 Ga0207667_10290817 3300025949 Bacteria 1669
122 Ga0207651_10203940 3300025960 Bacteria 1587
123 Ga0207712_10007698 3300025961 Bacteria 6811
124 Ga0207668_10017519 3300025972 Bacteria 4489
125 Ga0207668_10093444 3300025972 Bacteria 2216
126 Ga0207658_10253697 3300025986 Bacteria 1496
127 Ga0207639_10007332 3300026041 Bacteria 7515
128 Ga0207702_10558886 3300026078 Bacteria 1120
129 Ga0207648_10052223 3300026089 Bacteria 3574
130 Ga0207674_10021720 3300026116 Bacteria 6908
131 Ga0207674_10165632 3300026116 Bacteria 2165
132 Ga0207674_10319287 3300026116 Bacteria 1503
133 Ga0207683_10000659 3300026121 Bacteria 31666
134 Ga0207698_10006734 3300026142 Bacteria 7179
135 Ga0207698_10288435 3300026142 Bacteria 1522
136 Ga0209588_1000314 3300027671 Bacteria 12691
137 Ga0209813_10063168 3300027866 Bacteria 1187
138 Ga0207428_10072666 3300027907 Bacteria 2700
139 Ga0207428_10345049 3300027907 Bacteria 1096
140 Ga0268266_10000001 3300028379 Bacteria 4040580
141 Ga0268266_10024976 3300028379 Bacteria 5085
142 Ga0268266_10160255 3300028379 Bacteria 2035
143 Ga0268265_10002240 3300028380 Bacteria 14837
144 Ga0268264_10014076 3300028381 Bacteria 6576
145 Ga0307512_10044703 3300030522 Bacteria 3637
146 Ga0265760_10013914 3300031090 Bacteria 2303
147 Ga0265332_10007194 3300031238 Bacteria 5036
148 Ga0307509_10042383 3300031507 Bacteria 4932
149 Ga0307508_10000142 3300031616 Bacteria 85288
150 Ga0307514_10024697 3300031649 Bacteria 4862
151 Ga0307414_10002191 3300032004 Bacteria 10194
152 Ga0307507_10050693 3300033179 Bacteria 4004
153 Ga0307507_10107309 3300033179 Bacteria 2302
154 Ga0395901_0430886 3300038443 Bacteria 1351
155 Ga0439447_007573 3300041407 Bacteria 3431
156 Ga0451797_0567875 3300041453 Bacteria 1581
157 Ga0466967_0194411 3300045976 Bacteria 1919
158 Ga0495590_0044530 3300046457 Bacteria 1547
159 Ga0495638_0020624 3300046460 Bacteria 4353
160 Ga0495664_0166837 3300046477 Unclassified 1336
161 Ga0495618_0094135 3300046514 Bacteria 1916
162 Ga0495630_0375120 3300046517 Bacteria 1089
163 Ga0495632_0007813 3300046519 Bacteria 6661
164 Ga0495633_0000714 3300046558 Bacteria 30168
165 Ga0495667_0058614 3300046559 Bacteria 2529
166 Ga0495668_0001047 3300046616 Bacteria 29341
167 Ga0495668_0011167 3300046616 Bacteria 5392
168 Ga0495668_0013551 3300046616 Bacteria 4806
169 Ga0495668_0020911 3300046616 Bacteria 3758
170 Ga0495625_0082461 3300046660 Bacteria 2236
171 Ga0495599_0176372 3300046678 Unclassified 1318
172 Ga0495660_0006905 3300046810 Bacteria 6685
173 Ga0495660_0024669 3300046810 Bacteria 3425
174 Ga0495680_0159894 3300047322 Bacteria 1636
175 Ga0495602_0160052 3300048088 Bacteria 1759
176 Ga0496102_0233076 3300048905 Bacteria 1736
177 Ga0496116_0000081 3300048919 Bacteria 224170
178 Ga0496117_0021311 3300048920 Bacteria 5248
179 Ga0496118_0004677 3300048921 Bacteria 16044
180 Ga0496118_0042612 3300048921 Bacteria 3579
181 Ga0496121_0015846 3300048924 Bacteria 7837
182 Ga0496121_0268167 3300048924 Bacteria 1175
183 Ga0496123_0105681 3300048926 Bacteria 1624
184 Ga0496124_0172495 3300048927 Bacteria 1673
185 Ga0496125_0002965 3300048928 Bacteria 21336
186 Ga0501033_0070122 3300049570 Bacteria 2575
187 Ga0501047_0026016 3300049581 Bacteria 5627
188 Ga0501080_0295422 3300049742 Bacteria 1470
189 Ga0501080_0366258 3300049742 Bacteria 1300
190 Ga0501035_0036992 3300049822 Bacteria 4422
191 Ga0501044_0159524 3300049823 Bacteria 2233
192 nmdc:mga03683_218338_c1 3300050489 Bacteria 879
193 nmdc:mga0k408_13799_c1 3300050493 Bacteria 4437
194 nmdc:mga0k408_36661_c1 3300050493 Bacteria 2815
195 nmdc:mga04h51_4102_c1 3300050495 Bacteria 3591
196 nmdc:mga07m45_12674_c1 3300050496 Bacteria 4459
197 nmdc:mga07m45_49_c1 3300050496 Bacteria 53186
198 nmdc:mga05p37_91333_c1 3300050507 Bacteria 3752
199 nmdc:mga09592_54722_c1 3300050508 Bacteria 3371
200 nmdc:mga0qj67_138377_c1 3300050509 Bacteria 1974
201 nmdc:mga06r32_304064_c1 3300050510 Bacteria 1581
202 nmdc:mga08y16_227502_c1 3300050511 Bacteria 1930
203 nmdc:mga08y16_395611_c1 3300050511 Bacteria 1415
204 nmdc:mga0n895_490247_c1 3300050512 Bacteria 1239
205 nmdc:mga0a205_29597_c1 3300050515 Bacteria 5241
206 Ga0500583_0035698 3300053092 Bacteria 2220
207 Ga0500641_0128887 3300053096 Bacteria 1091
208 Ga0500592_007005 3300053116 Bacteria 1793
209 Ga0500658_0022368 3300053134 Bacteria 2403
210 Ga0500622_0026988 3300053156 Bacteria 3028
211 Ga0500570_048024 3300053724 Bacteria 2173
212 Ga0500611_026276 3300053727 Bacteria 1162
213 Ga0501084_0141608 3300054114 Bacteria 2025

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050489 nmdc:mga03683_218338_c1 nmdc:mga03683_218338_c1_16_720 234
2 3300025936 Ga0207670_10050872 Ga0207670_100508721 238
3 3300025942 Ga0207689_10417940 Ga0207689_104179402 255
4 3300005435 Ga0070714_100362864 Ga0070714_1003628641 274
5 3300009553 Ga0105249_10012283 Ga0105249_100122836 275
6 3300046660 Ga0495625_0082461 Ga0495625_0082461_618_1487 275
7 3300050512 nmdc:mga0n895_490247_c1 nmdc:mga0n895_490247_c1_217_1047 275
8 3300050515 nmdc:mga0a205_29597_c1 nmdc:mga0a205_29597_c1_3202_4032 275
9 3300053724 Ga0500570_048024 Ga0500570_048024_277_1146 275
10 3300006846 Ga0075430_100143127 Ga0075430_1001431272 276
11 3300050509 nmdc:mga0qj67_138377_c1 nmdc:mga0qj67_138377_c1_665_1591 276
12 3300050510 nmdc:mga06r32_304064_c1 nmdc:mga06r32_304064_c1_269_1195 276
13 3300005436 Ga0070713_100095369 Ga0070713_1000953692 277
14 iso_pu_bacteria 2582581316 2585336018 278
15 3300005548 Ga0070665_100264446 Ga0070665_1002644463 280
16 3300009174 Ga0105241_10068707 Ga0105241_100687072 280
17 3300014969 Ga0157376_10498362 Ga0157376_104983622 280
18 3300025911 Ga0207654_10041879 Ga0207654_100418792 280
19 3300025913 Ga0207695_10015994 Ga0207695_100159944 280
20 3300028379 Ga0268266_10024976 Ga0268266_100249766 280
21 3300009094 Ga0111539_10100612 Ga0111539_101006122 281
22 3300049570 Ga0501033_0070122 Ga0501033_0070122_180_1025 281
23 3300049581 Ga0501047_0026016 Ga0501047_0026016_1315_2160 281
24 3300049742 Ga0501080_0295422 Ga0501080_0295422_316_1161 281
25 3300049822 Ga0501035_0036992 Ga0501035_0036992_1713_2558 281
26 3300049823 Ga0501044_0159524 Ga0501044_0159524_992_1837 281
27 3300050511 nmdc:mga08y16_395611_c1 nmdc:mga08y16_395611_c1_93_938 281
28 3300005617 Ga0068859_100213437 Ga0068859_1002134371 282
29 3300006931 Ga0097620_100213424 Ga0097620_1002134241 282
30 3300026116 Ga0207674_10319287 Ga0207674_103192872 282
31 3300053096 Ga0500641_0128887 Ga0500641_0128887_203_1051 282
32 iso_pu_bacteria 2899359706 2899361429 282
33 3300005843 Ga0068860_100098303 Ga0068860_1000983034 283
34 3300027907 Ga0207428_10345049 Ga0207428_103450492 283
35 3300028381 Ga0268264_10014076 Ga0268264_100140768 283
36 3300005539 Ga0068853_100009461 Ga0068853_1000094619 284
37 3300005578 Ga0068854_100109642 Ga0068854_1001096422 284
38 3300005616 Ga0068852_100063344 Ga0068852_1000633442 284
39 3300006038 Ga0075365_10195343 Ga0075365_101953432 284
40 3300026041 Ga0207639_10007332 Ga0207639_100073322 284
41 3300026142 Ga0207698_10288435 Ga0207698_102884352 284
42 iso_pu_bacteria 2643221593 2643976504 284
43 iso_pu_bacteria 2844533157 2844536721 284
44 3300005577 Ga0068857_100020670 Ga0068857_1000206704 285
45 3300025949 Ga0207667_10290817 Ga0207667_102908172 285
46 3300026078 Ga0207702_10558886 Ga0207702_105588861 285
47 3300026116 Ga0207674_10021720 Ga0207674_100217201 285
48 3300026116 Ga0207674_10165632 Ga0207674_101656322 285
49 3300053092 Ga0500583_0035698 Ga0500583_0035698_195_1052 285
50 3300005456 Ga0070678_100051280 Ga0070678_1000512801 286
51 3300006844 Ga0075428_100272962 Ga0075428_1002729622 286
52 3300010375 Ga0105239_10000734 Ga0105239_1000073410 286
53 3300031090 Ga0265760_10013914 Ga0265760_100139142 286
54 3300049742 Ga0501080_0366258 Ga0501080_0366258_407_1267 286
55 iso_pu_bacteria 2582581280 2585150901 286
56 iso_pu_bacteria 2582581293 2585195873 286
57 iso_pu_bacteria 2585428106 2587916828 286
58 3300005436 Ga0070713_100312333 Ga0070713_1003123331 287
59 3300005437 Ga0070710_10150944 Ga0070710_101509442 287
60 3300005548 Ga0070665_100000669 Ga0070665_10000066923 287
61 3300005937 Ga0081455_10001706 Ga0081455_1000170629 287
62 3300006028 Ga0070717_10260135 Ga0070717_102601351 287
63 3300009093 Ga0105240_10040592 Ga0105240_100405926 287
64 3300014968 Ga0157379_10038085 Ga0157379_100380854 287
65 3300025899 Ga0207642_10011169 Ga0207642_100111694 287
66 3300025913 Ga0207695_10013055 Ga0207695_100130555 287
67 3300025928 Ga0207700_10585250 Ga0207700_105852501 287
68 3300025929 Ga0207664_10029329 Ga0207664_100293296 287
69 3300025939 Ga0207665_10112781 Ga0207665_101127812 287
70 3300026121 Ga0207683_10000659 Ga0207683_1000065918 287
71 3300028379 Ga0268266_10000001 Ga0268266_100000013082 287
72 3300046477 Ga0495664_0166837 Ga0495664_0166837_257_1171 287
73 3300046514 Ga0495618_0094135 Ga0495618_0094135_798_1712 287
74 3300046517 Ga0495630_0375120 Ga0495630_0375120_75_989 287
75 3300046559 Ga0495667_0058614 Ga0495667_0058614_58_972 287
76 3300046678 Ga0495599_0176372 Ga0495599_0176372_275_1189 287
77 3300047322 Ga0495680_0159894 Ga0495680_0159894_23_937 287
78 3300048088 Ga0495602_0160052 Ga0495602_0160052_800_1714 287
79 3300003187 JGI25151J46595_10000692 JGI25151J46595_1000069210 288
80 3300005334 Ga0068869_100092143 Ga0068869_1000921433 288
81 3300005340 Ga0070689_100039867 Ga0070689_1000398673 288
82 3300005345 Ga0070692_10121957 Ga0070692_101219572 288
83 3300005347 Ga0070668_100293869 Ga0070668_1002938692 288
84 3300005353 Ga0070669_100009080 Ga0070669_1000090802 288
85 3300005353 Ga0070669_100019518 Ga0070669_1000195183 288
86 3300005364 Ga0070673_100041241 Ga0070673_1000412412 288
87 3300005367 Ga0070667_100198254 Ga0070667_1001982542 288
88 3300005438 Ga0070701_10079064 Ga0070701_100790642 288
89 3300005444 Ga0070694_100096161 Ga0070694_1000961611 288
90 3300005518 Ga0070699_100513720 Ga0070699_1005137201 288
91 3300005536 Ga0070697_100092458 Ga0070697_1000924582 288
92 3300005543 Ga0070672_100038493 Ga0070672_1000384934 288
93 3300005563 Ga0068855_100048898 Ga0068855_1000488982 288
94 3300005840 Ga0068870_10006240 Ga0068870_100062406 288
95 3300005843 Ga0068860_100144890 Ga0068860_1001448902 288
96 3300005844 Ga0068862_100012676 Ga0068862_1000126763 288
97 3300006177 Ga0075362_10003192 Ga0075362_100031925 288
98 3300006178 Ga0075367_10007370 Ga0075367_100073702 288
99 3300006195 Ga0075366_10002185 Ga0075366_100021857 288
100 3300006871 Ga0075434_100063482 Ga0075434_1000634824 288
101 3300006871 Ga0075434_100198553 Ga0075434_1001985532 288
102 3300009093 Ga0105240_10008057 Ga0105240_1000805713 288
103 3300009094 Ga0111539_10088752 Ga0111539_100887523 288
104 3300009147 Ga0114129_10044791 Ga0114129_100447914 288
105 3300013104 Ga0157370_10132344 Ga0157370_101323443 288
106 3300013105 Ga0157369_10002781 Ga0157369_1000278113 288
107 3300013307 Ga0157372_10059597 Ga0157372_100595973 288
108 3300013308 Ga0157375_10255413 Ga0157375_102554133 288
109 3300014326 Ga0157380_10003721 Ga0157380_100037216 288
110 3300025245 Ga0207425_1002564 Ga0207425_10025643 288
111 3300025294 Ga0209025_1000069 Ga0209025_1000069192 288
112 3300025913 Ga0207695_10039721 Ga0207695_100397214 288
113 3300025923 Ga0207681_10005358 Ga0207681_100053582 288
114 3300025923 Ga0207681_10032174 Ga0207681_100321743 288
115 3300025925 Ga0207650_10298739 Ga0207650_102987391 288
116 3300025940 Ga0207691_10005991 Ga0207691_100059914 288
117 3300025942 Ga0207689_10110097 Ga0207689_101100973 288
118 3300025961 Ga0207712_10007698 Ga0207712_100076985 288
119 3300025972 Ga0207668_10093444 Ga0207668_100934442 288
120 3300025986 Ga0207658_10253697 Ga0207658_102536972 288
121 3300026089 Ga0207648_10052223 Ga0207648_100522231 288
122 3300027866 Ga0209813_10063168 Ga0209813_100631681 288
123 3300027907 Ga0207428_10072666 Ga0207428_100726663 288
124 3300028379 Ga0268266_10160255 Ga0268266_101602551 288
125 3300028380 Ga0268265_10002240 Ga0268265_100022409 288
126 3300030522 Ga0307512_10044703 Ga0307512_100447032 288
127 3300031507 Ga0307509_10042383 Ga0307509_100423832 288
128 3300031616 Ga0307508_10000142 Ga0307508_1000014242 288
129 3300031649 Ga0307514_10024697 Ga0307514_100246973 288
130 3300033179 Ga0307507_10050693 Ga0307507_100506932 288
131 3300033179 Ga0307507_10107309 Ga0307507_101073092 288
132 3300041407 Ga0439447_007573 Ga0439447_007573_629_1510 288
133 3300041453 Ga0451797_0567875 Ga0451797_0567875_695_1564 288
134 3300046460 Ga0495638_0020624 Ga0495638_0020624_2697_3572 288
135 3300048921 Ga0496118_0004677 Ga0496118_0004677_15003_15884 288
136 3300048924 Ga0496121_0268167 Ga0496121_0268167_142_1023 288
137 3300050493 nmdc:mga0k408_13799_c1 nmdc:mga0k408_13799_c1_1741_2649 288
138 3300050495 nmdc:mga04h51_4102_c1 nmdc:mga04h51_4102_c1_1922_2830 288
139 3300050507 nmdc:mga05p37_91333_c1 nmdc:mga05p37_91333_c1_1415_2302 288
140 3300050508 nmdc:mga09592_54722_c1 nmdc:mga09592_54722_c1_1288_2157 288
141 3300050511 nmdc:mga08y16_227502_c1 nmdc:mga08y16_227502_c1_23_892 288
142 3300053116 Ga0500592_007005 Ga0500592_007005_574_1449 288
143 3300053134 Ga0500658_0022368 Ga0500658_0022368_1343_2236 288
144 iso_pu_bacteria 2643221552 2643780607 288
145 iso_pu_bacteria 2643221584 2643929377 288
146 3300003215 JGI25153J46596_10019953 JGI25153J46596_100199532 289
147 3300003781 Ga0055536_1000029 Ga0055536_100002926 289
148 3300003781 Ga0055536_1000092 Ga0055536_100009254 289
149 3300003791 Ga0055530_10000363 Ga0055530_1000036324 289
150 3300005366 Ga0070659_100168507 Ga0070659_1001685073 289
151 3300005616 Ga0068852_100157215 Ga0068852_1001572153 289
152 3300006353 Ga0075370_10067859 Ga0075370_100678592 289
153 3300009147 Ga0114129_10317624 Ga0114129_103176242 289
154 3300025292 Ga0209676_1000057 Ga0209676_1000057251 289
155 3300025297 Ga0209758_1005531 Ga0209758_10055315 289
156 3300025298 Ga0209050_1000096 Ga0209050_1000096148 289
157 3300025303 Ga0209051_1001149 Ga0209051_100114918 289
158 3300025304 Ga0209257_1004880 Ga0209257_10048803 289
159 3300045976 Ga0466967_0194411 Ga0466967_0194411_622_1524 289
160 3300046457 Ga0495590_0044530 Ga0495590_0044530_112_1050 289
161 3300046519 Ga0495632_0007813 Ga0495632_0007813_3615_4562 289
162 3300046616 Ga0495668_0011167 Ga0495668_0011167_432_1379 289
163 3300046616 Ga0495668_0020911 Ga0495668_0020911_207_1145 289
164 3300046810 Ga0495660_0006905 Ga0495660_0006905_1520_2467 289
165 3300050493 nmdc:mga0k408_36661_c1 nmdc:mga0k408_36661_c1_774_1766 289
166 3300053156 Ga0500622_0026988 Ga0500622_0026988_762_1796 289
167 3300005328 Ga0070676_10096447 Ga0070676_100964471 290
168 3300005543 Ga0070672_100104423 Ga0070672_1001044232 290
169 3300005616 Ga0068852_100030357 Ga0068852_1000303572 290
170 3300006353 Ga0075370_10000132 Ga0075370_100001327 290
171 3300009551 Ga0105238_10621868 Ga0105238_106218681 290
172 3300025960 Ga0207651_10203940 Ga0207651_102039402 290
173 3300026142 Ga0207698_10006734 Ga0207698_100067345 290
174 3300038443 Ga0395901_0430886 Ga0395901_0430886_157_1035 290
175 3300050496 nmdc:mga07m45_49_c1 nmdc:mga07m45_49_c1_30973_31917 290
176 3300006353 Ga0075370_10011745 Ga0075370_100117457 291
177 3300013100 Ga0157373_10044443 Ga0157373_100444432 291
178 3300013102 Ga0157371_10011816 Ga0157371_100118167 291
179 3300013104 Ga0157370_10036261 Ga0157370_100362616 291
180 3300013105 Ga0157369_10077223 Ga0157369_100772233 291
181 3300015261 Ga0182006_1006352 Ga0182006_10063527 291
182 3300025972 Ga0207668_10017519 Ga0207668_100175192 291
183 3300031238 Ga0265332_10007194 Ga0265332_100071943 291
184 3300032004 Ga0307414_10002191 Ga0307414_1000219114 291
185 3300046558 Ga0495633_0000714 Ga0495633_0000714_15322_16326 291
186 3300046616 Ga0495668_0001047 Ga0495668_0001047_14615_15574 291
187 3300046616 Ga0495668_0013551 Ga0495668_0013551_1021_1974 291
188 3300046810 Ga0495660_0024669 Ga0495660_0024669_920_1873 291
189 3300048919 Ga0496116_0000081 Ga0496116_0000081_133097_134086 291
190 3300048920 Ga0496117_0021311 Ga0496117_0021311_3970_4959 291
191 3300048921 Ga0496118_0042612 Ga0496118_0042612_2342_3331 291
192 3300048924 Ga0496121_0015846 Ga0496121_0015846_332_1321 291
193 3300048926 Ga0496123_0105681 Ga0496123_0105681_37_1026 291
194 3300048927 Ga0496124_0172495 Ga0496124_0172495_430_1419 291
195 3300048928 Ga0496125_0002965 Ga0496125_0002965_11904_12893 291
196 3300050496 nmdc:mga07m45_12674_c1 nmdc:mga07m45_12674_c1_1041_1994 291
197 iso_pu_bacteria 2874220319 2874221841 291
198 iso_pu_bacteria 2928496128 2928497307 291
199 iso_pu_bacteria 2937610967 2937612688 291
200 iso_pu_bacteria 2961047084 2961048608 291
201 3300048905 Ga0496102_0233076 Ga0496102_0233076_682_1563 292
202 3300002773 JGI25152J39213_1004100 JGI25152J39213_10041005 293
203 3300003215 JGI25153J46596_10001218 JGI25153J46596_1000121810 293
204 3300003322 rootL2_10078996 rootL2_100789961 293
205 3300003323 rootH1_10064705 rootH1_100647052 293
206 3300003771 Ga0055526_1010294 Ga0055526_10102942 293
207 3300005434 Ga0070709_10029145 Ga0070709_100291452 293
208 3300005436 Ga0070713_100013460 Ga0070713_1000134605 293
209 3300005467 Ga0070706_100010373 Ga0070706_1000103736 293
210 3300005471 Ga0070698_100016499 Ga0070698_1000164992 293
211 3300006028 Ga0070717_10054669 Ga0070717_100546693 293
212 3300006163 Ga0070715_10003709 Ga0070715_100037094 293
213 3300006175 Ga0070712_100010192 Ga0070712_1000101922 293
214 3300007265 Ga0099794_10000907 Ga0099794_100009079 293
215 3300025245 Ga0207425_1000849 Ga0207425_10008494 293
216 3300025258 Ga0209129_1000124 Ga0209129_100012483 293
217 3300025295 Ga0209564_1000057 Ga0209564_100005738 293
218 3300025297 Ga0209758_1000214 Ga0209758_10002148 293
219 3300025304 Ga0209257_1013874 Ga0209257_10138742 293
220 3300025906 Ga0207699_10003571 Ga0207699_100035712 293
221 3300025915 Ga0207693_10007968 Ga0207693_100079685 293
222 3300025928 Ga0207700_10018679 Ga0207700_100186793 293
223 3300025939 Ga0207665_10004987 Ga0207665_100049873 293
224 3300027671 Ga0209588_1000314 Ga0209588_10003144 293
225 3300053727 Ga0500611_026276 Ga0500611_026276_69_1007 293
226 3300054114 Ga0501084_0141608 Ga0501084_0141608_785_1681 293

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

86

226

0.9

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

88

338

0.59

Structural Annotation

Top 5 Hits

ID Description Score Start End
8b6o-assembly1.cif.gz_A x-ray structure of the haloalkane dehalogenase halotag7 circular permutated at positions 141-156 (cphalotagdelta) fused to m13 0.906 15 133
8b6p-assembly2.cif.gz_B x-ray structure of the haloalkane dehalogenase halotag7 circular permutated at positions 154-156 (cphalotag7_154-156) 0.8985 15 133
8b6n-assembly1.cif.gz_A x-ray structure of the haloalkane dehalogenase halotag7 circular permutated at positions 141-156 (cphalotagdelta) 0.8576 3 133
5w15-assembly1.cif.gz_D-3 crystal structure of an alpha/beta hydrolase fold protein from burkholderia ambifaria. 0.8537 15 285
1iun-assembly1.cif.gz_B meta-cleavage product hydrolase from pseudomonas fluorescens ip01 (cumd) s103a mutant hexagonal 0.8499 16 293
ID Description Score Start End Superfamily
af_A0A0R0EQP0_201_384_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9056 33 136 3.40.50.1820
af_O53622_2_273_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8917 16 288 3.40.50.1820
af_O53622_2_273_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8856 16 288 3.40.50.1820
af_A0A0P0WIT7_2_163_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8778 27 134 3.40.50.1820
1iunA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8715 16 291 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A534EFA6-F1-model_v4 Alpha/beta hydrolase 0.9963 14 247 GO:0016020
GO:0016787
AF-A0A4R6VI04-F1-model_v4 Pimeloyl-ACP methyl ester carboxylesterase 0.9848 9 288 GO:0016020
GO:0046464
GO:0047372
AF-A0A6M4GP84-F1-model_v4 Haloalkane dehalogenase 2 (EC 3.8.1.5) 0.983 3 292 GO:0016020
GO:0018786
AF-A0A2A5EV15-F1-model_v4 Hydrolase 0.9807 5 291 GO:0016787
AF-A0A7Y5VKT4-F1-model_v4 Alpha/beta fold hydrolase 0.9733 2 130 GO:0016020
GO:0046464
GO:0047372

Feature Viewer

pLDDT pTM Quality
96.49 0.94 High
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Predicted Structure (AlphaFold2)

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