F338824

General Info

Members Datasets Scaffolds Average Seq Length
226 161 226 421

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10108491|Ga0105248_101084912
Length 470
Sequence MSSMAEPRVVPREEHTLSRRDVDPDALKVLYRLRQFNHTAYLVGGSVRDLLIGRRPKDFDIGTSAHPYQVKKLFRNCWIIGRRFRLAHVKFGSKVIEVATFRRQVAPGEEIVQDGVPAPVHHPLPEPAEDVLLDELGTVPAFSGPALVERHRGETAADHLIHHDNTFGTPEEDAFRRDFTINALFYDISTFSVIDYVGGLEDLRAGLVRSIGDPEVRFREDPVRMMRAVALAARLDFTIDQPSLDAIHIHRHEIARSSPPRLLEEYYKILRAGSAERTFRELAKRGLLEPVSAELHHGAAESLWQSLAALDGYRRQFEATPDTLTNPILLGSLIGPLGLVGAARPHESRSSNDGASANAGRSKDRPLQEGVQQASNPRVRHWPAGPRLGDLPLARRDVERLRQILGLQRRLRDLTASPRARRALSHRSIFREALTWLDIHGAVPDLVEQWRVLLADTDAAADVVGDRPTT

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
87 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
88 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
89 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
90 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
91 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
92 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
93 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
94 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
95 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
96 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
115 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
119 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
120 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
146 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
149 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 6.19
Rhizosphere 92.92
Stem 0
Stem Tuber 0
Unclassified 0.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10082794 3300005290 Bacteria 2885
2 Ga0065712_10097101 3300005290 Bacteria 2161
3 Ga0065715_10089045 3300005293 Bacteria 15674
4 Ga0065707_10000851 3300005295 Bacteria 13414
5 Ga0070676_10003175 3300005328 Bacteria 8512
6 Ga0070690_100019663 3300005330 Bacteria 4104
7 Ga0070666_10069951 3300005335 Bacteria 2387
8 Ga0070682_100069236 3300005337 Bacteria 2253
9 Ga0070689_100042490 3300005340 Bacteria 3491
10 Ga0070689_100075648 3300005340 Bacteria 2636
11 Ga0070687_100050342 3300005343 Bacteria 2151
12 Ga0070675_100032341 3300005354 Bacteria 4233
13 Ga0070671_100008102 3300005355 Bacteria 8415
14 Ga0070674_100005495 3300005356 Bacteria 7325
15 Ga0070674_100160653 3300005356 Bacteria 1705
16 Ga0070659_100103039 3300005366 Bacteria 2298
17 Ga0070667_100016501 3300005367 Bacteria 6112
18 Ga0070709_10020063 3300005434 Bacteria 3874
19 Ga0070714_100217684 3300005435 Bacteria 1754
20 Ga0070713_100028300 3300005436 Bacteria 4425
21 Ga0070711_100139599 3300005439 Bacteria 1815
22 Ga0070708_100025970 3300005445 Bacteria 5009
23 Ga0070681_10000481 3300005458 Bacteria 32558
24 Ga0070681_10038100 3300005458 Bacteria 4820
25 Ga0070707_100144787 3300005468 Bacteria 2313
26 Ga0070698_100060485 3300005471 Bacteria 3823
27 Ga0070698_100087123 3300005471 Bacteria 3109
28 Ga0070699_100005305 3300005518 Bacteria 11306
29 Ga0070699_100186297 3300005518 Bacteria 1843
30 Ga0070684_100045203 3300005535 Bacteria 3813
31 Ga0070686_100014254 3300005544 Bacteria 4578
32 Ga0070686_100050658 3300005544 Bacteria 2640
33 Ga0070695_100002877 3300005545 Bacteria 10015
34 Ga0070695_100022880 3300005545 Bacteria 3835
35 Ga0070704_100045684 3300005549 Bacteria 3049
36 Ga0070704_100125575 3300005549 Bacteria 1979
37 Ga0068859_100007888 3300005617 Bacteria 10804
38 Ga0068859_100044384 3300005617 Bacteria 4466
39 Ga0068861_100038037 3300005719 Bacteria 3580
40 Ga0068861_100046437 3300005719 Bacteria 3274
41 Ga0068870_10035822 3300005840 Bacteria 2549
42 Ga0068858_100176704 3300005842 Bacteria 2015
43 Ga0068860_100025891 3300005843 Bacteria 5659
44 Ga0068860_100102974 3300005843 Bacteria 2725
45 Ga0068862_100066254 3300005844 Bacteria 3112
46 Ga0068862_100126299 3300005844 Bacteria 2258
47 Ga0081539_10003534 3300005985 Bacteria 19012
48 Ga0070717_10022649 3300006028 Bacteria 4968
49 Ga0097621_100001701 3300006237 Bacteria 15036
50 Ga0097621_100023099 3300006237 Bacteria 4837
51 Ga0068871_100000783 3300006358 Bacteria 21404
52 Ga0068871_100003626 3300006358 Bacteria 10609
53 Ga0068871_100021522 3300006358 Bacteria 4958
54 Ga0068871_100067438 3300006358 Bacteria 2935
55 Ga0068871_100228396 3300006358 Unclassified 1615
56 Ga0068871_100233856 3300006358 Bacteria 1596
57 Ga0075428_100000034 3300006844 Bacteria 115982
58 Ga0075428_100013780 3300006844 Bacteria 9005
59 Ga0075428_100254173 3300006844 Bacteria 1893
60 Ga0075430_100007294 3300006846 Bacteria 9336
61 Ga0075431_100096196 3300006847 Bacteria 3057
62 Ga0075431_100262103 3300006847 Bacteria 1754
63 Ga0075434_100002382 3300006871 Bacteria 16506
64 Ga0075429_100041918 3300006880 Bacteria 3985
65 Ga0075429_100159762 3300006880 Unclassified 1974
66 Ga0075436_100011734 3300006914 Bacteria 6014
67 Ga0075436_100013123 3300006914 Bacteria 5680
68 Ga0097620_100007888 3300006931 Bacteria 10804
69 Ga0097620_100044384 3300006931 Bacteria 4466
70 Ga0075435_100000964 3300007076 Bacteria 18176
71 Ga0105240_10107090 3300009093 Bacteria 3390
72 Ga0111539_10000014 3300009094 Bacteria 307501
73 Ga0114129_10000382 3300009147 Bacteria 51464
74 Ga0114129_10045669 3300009147 Bacteria 6157
75 Ga0114129_10047401 3300009147 Bacteria 6038
76 Ga0105243_10030995 3300009148 Bacteria 4121
77 Ga0105248_10005756 3300009177 Bacteria 13615
78 Ga0105248_10108491 3300009177 Unclassified 3130
79 Ga0105248_10136799 3300009177 Bacteria 2764
80 Ga0105248_10349703 3300009177 Bacteria 1664
81 Ga0105249_10105101 3300009553 Bacteria 2662
82 Ga0105249_10131844 3300009553 Bacteria 2387
83 Ga0157378_10050981 3300013297 Bacteria 3683
84 Ga0157378_10092216 3300013297 Unclassified 2756
85 Ga0157375_10035723 3300013308 Bacteria 4747
86 Ga0163163_10049565 3300014325 Bacteria 4133
87 Ga0157380_10055949 3300014326 Bacteria 3135
88 Ga0157380_10272576 3300014326 Bacteria 1544
89 Ga0157377_10086195 3300014745 Bacteria 1845
90 Ga0157379_10011153 3300014968 Bacteria 7833
91 Ga0157379_10025837 3300014968 Bacteria 5221
92 Ga0213876_10023753 3300021384 Bacteria 3237
93 Ga0207682_10050034 3300025893 Bacteria 1727
94 Ga0207680_10039575 3300025903 Unclassified 2737
95 Ga0207685_10003809 3300025905 Bacteria 3729
96 Ga0207699_10012400 3300025906 Bacteria 4336
97 Ga0207707_10073550 3300025912 Bacteria 2980
98 Ga0207707_10129407 3300025912 Bacteria 2208
99 Ga0207663_10083529 3300025916 Bacteria 2098
100 Ga0207662_10009933 3300025918 Bacteria 5250
101 Ga0207652_10137717 3300025921 Bacteria 2181
102 Ga0207700_10034017 3300025928 Bacteria 3654
103 Ga0207664_10087195 3300025929 Bacteria 2551
104 Ga0207644_10005063 3300025931 Bacteria 8602
105 Ga0207690_10085439 3300025932 Bacteria 2215
106 Ga0207709_10018873 3300025935 Bacteria 3868
107 Ga0207711_10023325 3300025941 Bacteria 5179
108 Ga0207661_10022217 3300025944 Bacteria 4773
109 Ga0207668_10031275 3300025972 Bacteria 3504
110 Ga0207703_10065661 3300026035 Unclassified 2983
111 Ga0207641_10000334 3300026088 Bacteria 57516
112 Ga0207675_100027498 3300026118 Bacteria 5298
113 Ga0207675_100057289 3300026118 Bacteria 3636
114 Ga0207683_10014844 3300026121 Bacteria 6632
115 Ga0207683_10031854 3300026121 Bacteria 4578
116 Ga0207683_10276068 3300026121 Bacteria 1536
117 Ga0207428_10000005 3300027907 Bacteria 520045
118 Ga0207428_10145168 3300027907 Bacteria 1809
119 Ga0268266_10112750 3300028379 Bacteria 2411
120 Ga0268265_10033776 3300028380 Bacteria 3722
121 Ga0268265_10083425 3300028380 Bacteria 2530
122 Ga0268265_10085846 3300028380 Bacteria 2499
123 Ga0268264_10012959 3300028381 Bacteria 6855
124 Ga0265332_10011285 3300031238 Bacteria 3973
125 Ga0265316_10112128 3300031344 Bacteria 2065
126 Ga0307409_100031474 3300031995 Bacteria 3830
127 Ga0373958_0004497 3300034819 Bacteria 2067
128 Ga0373938_0000198 3300034957 Bacteria 9021
129 Ga0373929_0004416 3300035085 Bacteria 2523
130 Ga0373939_0000163 3300035114 Bacteria 18472
131 Ga0373941_0001933 3300035115 Bacteria 4488
132 Ga0373956_0047866 3300035119 Bacteria 1914
133 Ga0373943_0003879 3300035170 Bacteria 6805
134 Ga0373943_0078002 3300035170 Bacteria 1693
135 Ga0373946_0013322 3300035171 Bacteria 3090
136 Ga0373955_0106841 3300035172 Bacteria 1614
137 Ga0373961_0002663 3300035241 Bacteria 4583
138 Ga0373962_0016464 3300035242 Bacteria 1906
139 Ga0373931_0100538 3300035691 Unclassified 1626
140 Ga0373947_0005162 3300035725 Bacteria 7650
141 Ga0373937_0121921 3300036401 Bacteria 2430
142 Ga0373925_0002078 3300037068 Bacteria 16464
143 Ga0453684_0052639 3300044712 Bacteria 5321
144 Ga0451576_0009072 3300045051 Bacteria 11582
145 Ga0495592_0044333 3300046454 Bacteria 3324
146 Ga0495592_0095894 3300046454 Bacteria 2121
147 Ga0495580_0088174 3300046472 Bacteria 2161
148 Ga0495608_0009091 3300046511 Bacteria 6946
149 Ga0495618_0094736 3300046514 Bacteria 1909
150 Ga0495628_0052370 3300046516 Bacteria 3224
151 Ga0495628_0053773 3300046516 Bacteria 3176
152 Ga0495630_0008300 3300046517 Bacteria 7459
153 Ga0495652_0042234 3300046529 Bacteria 3933
154 Ga0495609_0079809 3300046538 Bacteria 1431
155 Ga0495645_0012522 3300046543 Bacteria 5978
156 Ga0495667_0031700 3300046559 Bacteria 3545
157 Ga0495634_0073191 3300046642 Bacteria 2253
158 Ga0495659_0007161 3300046664 Bacteria 3532
159 Ga0495658_0026738 3300046683 Bacteria 3096
160 Ga0495669_0000725 3300046684 Bacteria 14329
161 Ga0495613_0021573 3300046689 Bacteria 4798
162 Ga0495604_0016497 3300047317 Bacteria 5905
163 Ga0495636_0021642 3300047318 Bacteria 2597
164 Ga0495684_0000217 3300047471 Bacteria 44614
165 Ga0496100_0005221 3300048903 Bacteria 6975
166 Ga0496101_0000663 3300048904 Bacteria 20738
167 Ga0496102_0022492 3300048905 Bacteria 5587
168 Ga0496102_0086046 3300048905 Bacteria 2903
169 Ga0496104_0023959 3300048907 Bacteria 5614
170 Ga0496105_0007418 3300048908 Bacteria 8488
171 Ga0496105_0045053 3300048908 Bacteria 3640
172 Ga0496106_0014145 3300048909 Bacteria 5895
173 Ga0496107_0015542 3300048910 Bacteria 5337
174 Ga0496109_0174915 3300048912 Bacteria 2015
175 Ga0496111_0105868 3300048914 Bacteria 2070
176 Ga0496112_0129039 3300048915 Bacteria 2499
177 Ga0496114_0000771 3300048917 Bacteria 23939
178 Ga0496115_0052499 3300048918 Bacteria 3271
179 Ga0501034_0012791 3300049571 Bacteria 8656
180 Ga0501038_0244031 3300049574 Bacteria 1425
181 Ga0501039_0121505 3300049575 Bacteria 2047
182 Ga0501040_0143356 3300049576 Bacteria 1683
183 Ga0501041_0005317 3300049577 Bacteria 7531
184 Ga0501042_0038021 3300049578 Bacteria 3417
185 Ga0501046_0109215 3300049580 Bacteria 2115
186 Ga0501047_0084531 3300049581 Bacteria 3050
187 Ga0501048_0078095 3300049582 Bacteria 2336
188 Ga0501073_0005516 3300049589 Bacteria 9476
189 Ga0501075_0005341 3300049591 Bacteria 8789
190 Ga0501075_0127387 3300049591 Bacteria 1939
191 Ga0501075_0194975 3300049591 Bacteria 1545
192 Ga0501076_0018390 3300049592 Bacteria 5327
193 Ga0501076_0063940 3300049592 Bacteria 2932
194 Ga0501077_0019053 3300049593 Bacteria 4339
195 Ga0501079_0151896 3300049741 Bacteria 1805
196 Ga0501080_0035879 3300049742 Bacteria 4629
197 Ga0501081_0148781 3300049743 Bacteria 1681
198 nmdc:mga0k408_149420_c1 3300050493 Bacteria 1391
199 nmdc:mga05p37_101297_c1 3300050507 Bacteria 3547
200 nmdc:mga05p37_111396_c1 3300050507 Bacteria 3366
201 nmdc:mga05p37_15416_c1 3300050507 Bacteria 9182
202 nmdc:mga05p37_4217_c1 3300050507 Bacteria 16790
203 nmdc:mga09592_37148_c1 3300050508 Bacteria 4084
204 nmdc:mga09592_88474_c1 3300050508 Unclassified 2645
205 nmdc:mga0qj67_1620_c1 3300050509 Bacteria 15833
206 nmdc:mga06r32_102849_c1 3300050510 Bacteria 2805
207 nmdc:mga06r32_211974_c1 3300050510 Bacteria 1925
208 nmdc:mga06r32_224144_c1 3300050510 Bacteria 1868
209 nmdc:mga06r32_50133_c1 3300050510 Bacteria 3993
210 nmdc:mga08y16_273643_c1 3300050511 Bacteria 1743
211 nmdc:mga08y16_9_c1 3300050511 Bacteria 566088
212 nmdc:mga0n895_25825_c1 3300050512 Bacteria 5555
213 nmdc:mga0n895_32655_c1 3300050512 Bacteria 4997
214 nmdc:mga0n895_39687_c1 3300050512 Bacteria 4569
215 nmdc:mga0n895_93597_c1 3300050512 Bacteria 3009
216 nmdc:mga0rr50_14074_c1 3300050513 Bacteria 5233
217 nmdc:mga08x19_15850_c1 3300050514 Bacteria 4590
218 nmdc:mga08x19_3813_c1 3300050514 Bacteria 8970
219 nmdc:mga0a205_156174_c1 3300050515 Bacteria 2180
220 nmdc:mga0a205_36177_c1 3300050515 Bacteria 4743
221 nmdc:mga0a205_74575_c1 3300050515 Bacteria 3278
222 Ga0495619_0013058 3300053085 Bacteria 5233
223 Ga0495619_0023306 3300053085 Bacteria 3968
224 Ga0501082_0017670 3300060353 Bacteria 6142
225 Ga0530510_0002909 3300061734 Bacteria 11737
226 Ga0530510_0313777 3300061734 Bacteria 1174

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049574 Ga0501038_0244031 Ga0501038_0244031_315_1397 335
2 3300061734 Ga0530510_0313777 Ga0530510_0313777_78_1160 335
3 3300005518 Ga0070699_100186297 Ga0070699_1001862972 372
4 3300005468 Ga0070707_100144787 Ga0070707_1001447872 373
5 3300005545 Ga0070695_100022880 Ga0070695_1000228805 373
6 3300050511 nmdc:mga08y16_273643_c1 nmdc:mga08y16_273643_c1_358_1698 373
7 3300025912 Ga0207707_10073550 Ga0207707_100735502 375
8 3300005458 Ga0070681_10038100 Ga0070681_100381002 376
9 3300044712 Ga0453684_0052639 Ga0453684_0052639_1716_3023 377
10 3300050493 nmdc:mga0k408_149420_c1 nmdc:mga0k408_149420_c1_55_1350 381
11 3300025912 Ga0207707_10129407 Ga0207707_101294072 383
12 3300005985 Ga0081539_10003534 Ga0081539_1000353412 385
13 3300005356 Ga0070674_100160653 Ga0070674_1001606532 386
14 3300009147 Ga0114129_10000382 Ga0114129_1000038222 386
15 3300025893 Ga0207682_10050034 Ga0207682_100500342 386
16 3300050507 nmdc:mga05p37_4217_c1 nmdc:mga05p37_4217_c1_5899_7239 386
17 3300050512 nmdc:mga0n895_32655_c1 nmdc:mga0n895_32655_c1_296_1636 386
18 3300050515 nmdc:mga0a205_36177_c1 nmdc:mga0a205_36177_c1_2705_4045 386
19 3300006880 Ga0075429_100159762 Ga0075429_1001597622 388
20 3300049571 Ga0501034_0012791 Ga0501034_0012791_248_1621 388
21 3300049581 Ga0501047_0084531 Ga0501047_0084531_1432_2805 388
22 3300050507 nmdc:mga05p37_111396_c1 nmdc:mga05p37_111396_c1_1059_2399 388
23 3300050508 nmdc:mga09592_88474_c1 nmdc:mga09592_88474_c1_378_1745 388
24 3300050514 nmdc:mga08x19_3813_c1 nmdc:mga08x19_3813_c1_7554_8951 388
25 3300026118 Ga0207675_100027498 Ga0207675_1000274982 390
26 3300028380 Ga0268265_10085846 Ga0268265_100858462 390
27 3300049591 Ga0501075_0194975 Ga0501075_0194975_35_1324 390
28 3300005356 Ga0070674_100005495 Ga0070674_1000054952 391
29 3300005435 Ga0070714_100217684 Ga0070714_1002176842 391
30 3300009148 Ga0105243_10030995 Ga0105243_100309952 391
31 3300009553 Ga0105249_10105101 Ga0105249_101051011 391
32 3300025929 Ga0207664_10087195 Ga0207664_100871951 391
33 3300025935 Ga0207709_10018873 Ga0207709_100188732 391
34 3300025972 Ga0207668_10031275 Ga0207668_100312752 391
35 3300005337 Ga0070682_100069236 Ga0070682_1000692362 392
36 3300005366 Ga0070659_100103039 Ga0070659_1001030392 392
37 3300025932 Ga0207690_10085439 Ga0207690_100854392 392
38 3300031995 Ga0307409_100031474 Ga0307409_1000314741 392
39 3300005617 Ga0068859_100044384 Ga0068859_1000443844 393
40 3300006931 Ga0097620_100044384 Ga0097620_1000443844 393
41 3300050513 nmdc:mga0rr50_14074_c1 nmdc:mga0rr50_14074_c1_1275_2639 393
42 3300005340 Ga0070689_100042490 Ga0070689_1000424902 394
43 3300026121 Ga0207683_10276068 Ga0207683_102760681 394
44 3300049741 Ga0501079_0151896 Ga0501079_0151896_457_1716 394
45 3300013308 Ga0157375_10035723 Ga0157375_100357231 395
46 3300014326 Ga0157380_10272576 Ga0157380_102725762 395
47 3300005842 Ga0068858_100176704 Ga0068858_1001767042 396
48 3300021384 Ga0213876_10023753 Ga0213876_100237532 396
49 3300009093 Ga0105240_10107090 Ga0105240_101070903 397
50 3300025905 Ga0207685_10003809 Ga0207685_100038092 397
51 3300006237 Ga0097621_100001701 Ga0097621_1000017016 399
52 3300006358 Ga0068871_100003626 Ga0068871_1000036267 399
53 3300007076 Ga0075435_100000964 Ga0075435_10000096411 399
54 3300026088 Ga0207641_10000334 Ga0207641_1000033437 399
55 3300028380 Ga0268265_10083425 Ga0268265_100834252 399
56 3300036401 Ga0373937_0121921 Ga0373937_0121921_517_1830 399
57 3300046516 Ga0495628_0053773 Ga0495628_0053773_104_1423 399
58 3300048903 Ga0496100_0005221 Ga0496100_0005221_5336_6649 399
59 3300048904 Ga0496101_0000663 Ga0496101_0000663_10715_12028 399
60 3300048905 Ga0496102_0086046 Ga0496102_0086046_588_1901 399
61 3300048907 Ga0496104_0023959 Ga0496104_0023959_1100_2413 399
62 3300048908 Ga0496105_0007418 Ga0496105_0007418_41_1354 399
63 3300048909 Ga0496106_0014145 Ga0496106_0014145_4231_5544 399
64 3300048910 Ga0496107_0015542 Ga0496107_0015542_761_2074 399
65 3300048917 Ga0496114_0000771 Ga0496114_0000771_14626_15939 399
66 3300048918 Ga0496115_0052499 Ga0496115_0052499_1622_2935 399
67 3300005295 Ga0065707_10000851 Ga0065707_100008518 400
68 3300006871 Ga0075434_100002382 Ga0075434_1000023827 400
69 3300009553 Ga0105249_10131844 Ga0105249_101318443 400
70 3300049591 Ga0501075_0127387 Ga0501075_0127387_265_1557 400
71 3300050512 nmdc:mga0n895_93597_c1 nmdc:mga0n895_93597_c1_1576_2886 400
72 3300050515 nmdc:mga0a205_74575_c1 nmdc:mga0a205_74575_c1_1393_2703 400
73 3300006844 Ga0075428_100000034 Ga0075428_10000003423 401
74 3300006914 Ga0075436_100011734 Ga0075436_1000117343 401
75 3300009094 Ga0111539_10000014 Ga0111539_10000014178 401
76 3300046538 Ga0495609_0079809 Ga0495609_0079809_40_1344 401
77 3300048908 Ga0496105_0045053 Ga0496105_0045053_1733_3043 401
78 3300049575 Ga0501039_0121505 Ga0501039_0121505_582_1862 401
79 3300049582 Ga0501048_0078095 Ga0501048_0078095_475_1755 401
80 3300049592 Ga0501076_0063940 Ga0501076_0063940_1617_2897 401
81 3300005617 Ga0068859_100007888 Ga0068859_1000078887 402
82 3300005840 Ga0068870_10035822 Ga0068870_100358222 402
83 3300006358 Ga0068871_100067438 Ga0068871_1000674382 402
84 3300006931 Ga0097620_100007888 Ga0097620_1000078884 402
85 3300027907 Ga0207428_10000005 Ga0207428_1000000568 402
86 3300046664 Ga0495659_0007161 Ga0495659_0007161_1716_3008 402
87 3300047318 Ga0495636_0021642 Ga0495636_0021642_1067_2359 402
88 3300048912 Ga0496109_0174915 Ga0496109_0174915_48_1355 402
89 3300050510 nmdc:mga06r32_224144_c1 nmdc:mga06r32_224144_c1_427_1725 402
90 3300050511 nmdc:mga08y16_9_c1 nmdc:mga08y16_9_c1_474892_476190 402
91 3300005293 Ga0065715_10089045 Ga0065715_100890454 403
92 3300005355 Ga0070671_100008102 Ga0070671_1000081023 403
93 3300005367 Ga0070667_100016501 Ga0070667_1000165013 403
94 3300005545 Ga0070695_100002877 Ga0070695_1000028778 403
95 3300005549 Ga0070704_100045684 Ga0070704_1000456842 403
96 3300005719 Ga0068861_100038037 Ga0068861_1000380374 403
97 3300005843 Ga0068860_100025891 Ga0068860_1000258914 403
98 3300005843 Ga0068860_100102974 Ga0068860_1001029743 403
99 3300005844 Ga0068862_100066254 Ga0068862_1000662542 403
100 3300009177 Ga0105248_10005756 Ga0105248_100057562 403
101 3300013297 Ga0157378_10092216 Ga0157378_100922162 403
102 3300025931 Ga0207644_10005063 Ga0207644_100050634 403
103 3300026118 Ga0207675_100057289 Ga0207675_1000572894 403
104 3300028381 Ga0268264_10012959 Ga0268264_100129594 403
105 3300050510 nmdc:mga06r32_50133_c1 nmdc:mga06r32_50133_c1_2306_3655 403
106 3300005290 Ga0065712_10097101 Ga0065712_100971012 404
107 3300006847 Ga0075431_100262103 Ga0075431_1002621032 404
108 3300026121 Ga0207683_10014844 Ga0207683_100148442 404
109 3300028379 Ga0268266_10112750 Ga0268266_101127501 404
110 3300045051 Ga0451576_0009072 Ga0451576_0009072_58_1407 404
111 3300046683 Ga0495658_0026738 Ga0495658_0026738_321_1634 404
112 3300049589 Ga0501073_0005516 Ga0501073_0005516_2483_3850 404
113 3300049593 Ga0501077_0019053 Ga0501077_0019053_563_1930 404
114 3300049742 Ga0501080_0035879 Ga0501080_0035879_2501_3868 404
115 3300050510 nmdc:mga06r32_211974_c1 nmdc:mga06r32_211974_c1_230_1576 404
116 3300060353 Ga0501082_0017670 Ga0501082_0017670_1245_2612 404
117 3300005330 Ga0070690_100019663 Ga0070690_1000196633 405
118 3300005335 Ga0070666_10069951 Ga0070666_100699512 405
119 3300005343 Ga0070687_100050342 Ga0070687_1000503422 405
120 3300005544 Ga0070686_100014254 Ga0070686_1000142542 405
121 3300014745 Ga0157377_10086195 Ga0157377_100861952 405
122 3300025918 Ga0207662_10009933 Ga0207662_100099334 405
123 3300048905 Ga0496102_0022492 Ga0496102_0022492_3163_4512 405
124 3300005354 Ga0070675_100032341 Ga0070675_1000323412 406
125 3300005844 Ga0068862_100126299 Ga0068862_1001262992 406
126 3300006358 Ga0068871_100021522 Ga0068871_1000215222 406
127 3300025903 Ga0207680_10039575 Ga0207680_100395753 406
128 3300025941 Ga0207711_10023325 Ga0207711_100233253 406
129 3300026035 Ga0207703_10065661 Ga0207703_100656612 406
130 3300028380 Ga0268265_10033776 Ga0268265_100337763 406
131 3300046454 Ga0495592_0044333 Ga0495592_0044333_1842_3173 406
132 3300046516 Ga0495628_0052370 Ga0495628_0052370_35_1366 406
133 3300046543 Ga0495645_0012522 Ga0495645_0012522_810_2141 406
134 3300050512 nmdc:mga0n895_25825_c1 nmdc:mga0n895_25825_c1_1707_3080 406
135 3300050512 nmdc:mga0n895_39687_c1 nmdc:mga0n895_39687_c1_17_1360 406
136 3300005549 Ga0070704_100125575 Ga0070704_1001255752 407
137 3300006358 Ga0068871_100000783 Ga0068871_10000078314 407
138 3300006847 Ga0075431_100096196 Ga0075431_1000961962 407
139 3300009147 Ga0114129_10047401 Ga0114129_100474014 407
140 3300035691 Ga0373931_0100538 Ga0373931_0100538_155_1516 407
141 3300050507 nmdc:mga05p37_15416_c1 nmdc:mga05p37_15416_c1_2237_3550 407
142 3300050515 nmdc:mga0a205_156174_c1 nmdc:mga0a205_156174_c1_519_1832 407
143 3300005471 Ga0070698_100060485 Ga0070698_1000604852 408
144 3300006358 Ga0068871_100228396 Ga0068871_1002283961 408
145 3300006358 Ga0068871_100233856 Ga0068871_1002338562 408
146 3300013297 Ga0157378_10050981 Ga0157378_100509812 408
147 3300014326 Ga0157380_10055949 Ga0157380_100559493 408
148 3300025921 Ga0207652_10137717 Ga0207652_101377172 408
149 3300031344 Ga0265316_10112128 Ga0265316_101121282 408
150 3300005340 Ga0070689_100075648 Ga0070689_1000756482 409
151 3300005445 Ga0070708_100025970 Ga0070708_1000259703 409
152 3300005535 Ga0070684_100045203 Ga0070684_1000452032 409
153 3300006844 Ga0075428_100254173 Ga0075428_1002541732 409
154 3300009177 Ga0105248_10349703 Ga0105248_103497032 409
155 3300025944 Ga0207661_10022217 Ga0207661_100222174 409
156 3300005328 Ga0070676_10003175 Ga0070676_100031753 410
157 3300027907 Ga0207428_10145168 Ga0207428_101451681 410
158 3300031238 Ga0265332_10011285 Ga0265332_100112852 410
159 3300034819 Ga0373958_0004497 Ga0373958_0004497_38_1387 410
160 3300034957 Ga0373938_0000198 Ga0373938_0000198_7529_8878 410
161 3300035085 Ga0373929_0004416 Ga0373929_0004416_949_2298 410
162 3300035114 Ga0373939_0000163 Ga0373939_0000163_7170_8519 410
163 3300035115 Ga0373941_0001933 Ga0373941_0001933_1410_2759 410
164 3300035241 Ga0373961_0002663 Ga0373961_0002663_758_2107 410
165 3300035242 Ga0373962_0016464 Ga0373962_0016464_379_1728 410
166 3300005471 Ga0070698_100087123 Ga0070698_1000871232 411
167 3300009177 Ga0105248_10108491 Ga0105248_101084912 411
168 3300026121 Ga0207683_10031854 Ga0207683_100318544 411
169 3300046511 Ga0495608_0009091 Ga0495608_0009091_998_2323 411
170 3300046514 Ga0495618_0094736 Ga0495618_0094736_41_1366 411
171 3300046517 Ga0495630_0008300 Ga0495630_0008300_1535_2860 411
172 3300046529 Ga0495652_0042234 Ga0495652_0042234_1337_2662 411
173 3300046559 Ga0495667_0031700 Ga0495667_0031700_1018_2343 411
174 3300046689 Ga0495613_0021573 Ga0495613_0021573_1230_2555 411
175 3300047317 Ga0495604_0016497 Ga0495604_0016497_2385_3710 411
176 3300047471 Ga0495684_0000217 Ga0495684_0000217_2781_4106 411
177 3300050507 nmdc:mga05p37_101297_c1 nmdc:mga05p37_101297_c1_933_2306 411
178 3300053085 Ga0495619_0013058 Ga0495619_0013058_1237_2562 411
179 3300005434 Ga0070709_10020063 Ga0070709_100200633 412
180 3300005436 Ga0070713_100028300 Ga0070713_1000283002 412
181 3300005439 Ga0070711_100139599 Ga0070711_1001395992 412
182 3300005518 Ga0070699_100005305 Ga0070699_1000053057 412
183 3300006028 Ga0070717_10022649 Ga0070717_100226493 412
184 3300006880 Ga0075429_100041918 Ga0075429_1000419182 412
185 3300006914 Ga0075436_100013123 Ga0075436_1000131232 412
186 3300025906 Ga0207699_10012400 Ga0207699_100124002 412
187 3300025928 Ga0207700_10034017 Ga0207700_100340171 412
188 3300035170 Ga0373943_0003879 Ga0373943_0003879_914_2248 412
189 3300035171 Ga0373946_0013322 Ga0373946_0013322_438_1772 412
190 3300035172 Ga0373955_0106841 Ga0373955_0106841_137_1471 412
191 3300035725 Ga0373947_0005162 Ga0373947_0005162_3870_5204 412
192 3300037068 Ga0373925_0002078 Ga0373925_0002078_7696_9030 412
193 3300046454 Ga0495592_0095894 Ga0495592_0095894_391_1722 412
194 3300046472 Ga0495580_0088174 Ga0495580_0088174_746_2080 412
195 3300050514 nmdc:mga08x19_15850_c1 nmdc:mga08x19_15850_c1_2187_3578 412
196 3300005719 Ga0068861_100046437 Ga0068861_1000464371 413
197 3300014968 Ga0157379_10011153 Ga0157379_100111534 413
198 3300025916 Ga0207663_10083529 Ga0207663_100835292 413
199 3300046684 Ga0495669_0000725 Ga0495669_0000725_10847_12184 413
200 3300053085 Ga0495619_0023306 Ga0495619_0023306_1290_2654 413
201 3300006237 Ga0097621_100023099 Ga0097621_1000230993 415
202 3300009177 Ga0105248_10136799 Ga0105248_101367992 415
203 3300006844 Ga0075428_100013780 Ga0075428_1000137803 416
204 3300006846 Ga0075430_100007294 Ga0075430_1000072946 416
205 3300009147 Ga0114129_10045669 Ga0114129_100456692 416
206 3300049576 Ga0501040_0143356 Ga0501040_0143356_261_1574 416
207 3300049577 Ga0501041_0005317 Ga0501041_0005317_4507_5820 416
208 3300049578 Ga0501042_0038021 Ga0501042_0038021_1119_2432 416
209 3300049580 Ga0501046_0109215 Ga0501046_0109215_547_1860 416
210 3300049591 Ga0501075_0005341 Ga0501075_0005341_2516_3829 416
211 3300049592 Ga0501076_0018390 Ga0501076_0018390_3613_4926 416
212 3300049743 Ga0501081_0148781 Ga0501081_0148781_97_1410 416
213 3300050508 nmdc:mga09592_37148_c1 nmdc:mga09592_37148_c1_1532_2845 416
214 3300050509 nmdc:mga0qj67_1620_c1 nmdc:mga0qj67_1620_c1_11446_12759 416
215 3300050510 nmdc:mga06r32_102849_c1 nmdc:mga06r32_102849_c1_837_2150 416
216 3300061734 Ga0530510_0002909 Ga0530510_0002909_10296_11609 416
217 3300046642 Ga0495634_0073191 Ga0495634_0073191_345_1730 417
218 3300014325 Ga0163163_10049565 Ga0163163_100495652 418
219 3300014968 Ga0157379_10025837 Ga0157379_100258373 418
220 3300005458 Ga0070681_10000481 Ga0070681_1000048121 421
221 3300035119 Ga0373956_0047866 Ga0373956_0047866_570_1889 421
222 3300048915 Ga0496112_0129039 Ga0496112_0129039_184_1509 421
223 3300035170 Ga0373943_0078002 Ga0373943_0078002_198_1523 422
224 3300048914 Ga0496111_0105868 Ga0496111_0105868_144_1469 422
225 3300005290 Ga0065712_10082794 Ga0065712_100827942 423
226 3300005544 Ga0070686_100050658 Ga0070686_1000506582 423

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01743

PolyA_pol

Poly A polymerase head domain

40

209

0.97

PF12627

PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

236

297

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nb2-assembly1.cif.gz_A crystal structure of fosb from staphylococcus aureus at 1.89 angstrom resolution - apo structure 0.7962 57 97
3fcd-assembly1.cif.gz_A crystal structure of a putative glyoxalase from an environmental bacteria 0.7642 63 97
3aql-assembly1.cif.gz_B structure of bacterial protein (apo form ii) 0.7423 6 393
3aqm-assembly1.cif.gz_B structure of bacterial protein (form ii) 0.7286 6 405
3aqk-assembly1.cif.gz_A structure of bacterial protein (apo form i) 0.7229 6 402
ID Description Score Start End Superfamily
3aqkA01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9216 6 174 3.30.460.10
3aqkA01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9028 6 174 3.30.460.10
3h37A02 Mainly Alpha;Orthogonal Bundle;Hydrophobic Seed Protein; 0.8991 174 258 1.10.110.30
1miyB02 Mainly Alpha;Orthogonal Bundle;Hydrophobic Seed Protein; 0.8947 180 255 1.10.110.30
3h37A02 Mainly Alpha;Orthogonal Bundle;Hydrophobic Seed Protein; 0.8796 174 258 1.10.110.30
ID Description Score Start End GO Terms
AF-A0A836XDG2-F1-model_v4 CCA tRNA nucleotidyltransferase 0.9583 137 233 GO:0000049
GO:0000166
GO:0008033
GO:0016779
AF-A0A2V7VPR9-F1-model_v4 Polynucleotide adenylyltransferase 0.9308 3 246 GO:0000166
GO:0003723
GO:0006396
GO:0043633
GO:1990817
AF-A0A3B8WYZ1-F1-model_v4 Polynucleotide adenylyltransferase PcnB 0.92 7 95 GO:0003723
GO:0006396
GO:0016779
AF-A0A4Q0IAQ2-F1-model_v4 CCA tRNA nucleotidyltransferase 0.9158 163 267 GO:0016740
AF-A0A525C013-F1-model_v4 Polynucleotide adenylyltransferase PcnB (EC 2.7.7.19) 0.9148 4 243 GO:0003723
GO:0006396
GO:0043633
GO:1990817

Feature Viewer

pLDDT pTM Quality
81.22 0.78 High
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Predicted Structure (AlphaFold2)

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