F338612

General Info

Members Datasets Scaffolds Average Seq Length
226 140 452 752

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100026477|Ga0070708_1000264774
Length 777
Sequence MRKRKRGFCEGYFQMSTDLIKVTINGKDFQVPKGARLIDVCRENAFDIPSFCYYADLALQASCRMCLVRIEKMPKLQTSCTIICTDGMVVTTQGEEIEKAQRAMMEFLLANHPLDCPVCDRGGECELQEMAFDWGGLEERFTERKNAQPEKYLSPMVANDPQRCILCKRCTRVCDEWMGEDAIEAGGRGANTVIGTYGGWLNCSQCGNCIEVCPTGTLLDATYRHQARPWELSQTVSTCTYCSDGCQMSLGSRGGDLMRIVARDRYVNGLNGEFLCIKGRFGHPFVNHEARIRTPMIRHQKGGKLIPATWDEAIRHVAAKLDSIADQHGPNAIGIVGSPRLTNEALYVLRKFATELVGTENYATSDAFSLKPFFDNLGAPLATHREIRYARTILLIGGEPEELQPLTGKQIRQAVRNGGTKLIIINSVPIRLREQASQFVHIRPGSEDAAVLALADRSNDPLAVRKMGVDASELDAARATINETQGDLIIMFGGELSAAAQTVVAQLPHAFAREGRRVLLHPLPLFNNSVGSHDMGMMNGATTATQVLESAGDAIRALYIAGSFLPEHLRGREETLGKLDFLVVQELFETETTAFADVVLPAASFAEIDGTFTNNDGFVQRVRQSIPPVHQSKADWMIMDQLARELGVDFGFQMSAGAVFREIADRIPAYADLRYPLLRDETKPIQVKHAIAPQRDLAKELEAIRRTVEEMDETVTKSKETPSVGHELFRVGTLTDKVPQFHLLAAGNPKPETLRISPVYQITVDASLRREASVAGD

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
4 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
51 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
77 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
118 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
122 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
127 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
128 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
132 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
133 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
134 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 1.33
Rhizosphere 96.02
Stem 0
Stem Tuber 0
Unclassified 4.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100026477 3300005445 Bacteria 4965
2 CNAas_1001062 3300000532 Bacteria 2514
3 JGI24748J21848_1000003 3300002074 Bacteria 323921
4 JGI24034J26672_10000005 3300002239 Bacteria 404185
5 JGI24751J29686_10000018 3300002459 Bacteria 107255
6 JGI24751J29686_10000077 3300002459 Bacteria 55718
7 Ga0065714_10064449 3300005288 Bacteria 78257
8 Ga0065704_10005161 3300005289 Bacteria 6335
9 Ga0065704_10008781 3300005289 Unclassified 2840
10 Ga0065712_10003876 3300005290 Bacteria 5683
11 Ga0065712_10067741 3300005290 Bacteria 78248
12 Ga0065715_10012650 3300005293 Bacteria 2942
13 Ga0065715_10089234 3300005293 Bacteria 12070
14 Ga0065715_10103153 3300005293 Bacteria 3055
15 Ga0070670_100000260 3300005331 Bacteria 47137
16 Ga0070670_100006760 3300005331 Bacteria 9720
17 Ga0070670_100019623 3300005331 Bacteria 5803
18 Ga0068869_100010625 3300005334 Bacteria 6009
19 Ga0068869_100029281 3300005334 Bacteria 3857
20 Ga0068869_100046455 3300005334 Bacteria 3131
21 Ga0070680_100000106 3300005336 Bacteria 48502
22 Ga0070682_100000081 3300005337 Bacteria 85485
23 Ga0070682_100009758 3300005337 Bacteria 5437
24 Ga0068868_100008479 3300005338 Bacteria 7361
25 Ga0070660_100033630 3300005339 Bacteria 3866
26 Ga0070689_100000807 3300005340 Bacteria 19300
27 Ga0070661_100014076 3300005344 Bacteria 5630
28 Ga0070668_100009733 3300005347 Bacteria 7128
29 Ga0070669_100002691 3300005353 Bacteria 12807
30 Ga0070669_100003003 3300005353 Bacteria 12149
31 Ga0070675_100030486 3300005354 Bacteria 4354
32 Ga0070675_100039730 3300005354 Bacteria 3840
33 Ga0070671_100003198 3300005355 Bacteria 12772
34 Ga0070674_100059096 3300005356 Bacteria 2668
35 Ga0070703_10000094 3300005406 Bacteria 45323
36 Ga0070700_100003898 3300005441 Bacteria 7749
37 Ga0070700_100033247 3300005441 Bacteria 3105
38 Ga0070694_100009083 3300005444 Bacteria 6096
39 Ga0070694_100012829 3300005444 Bacteria 5223
40 Ga0070708_100000002 3300005445 Bacteria 195857
41 Ga0070662_100043099 3300005457 Bacteria 3227
42 Ga0070681_10000162 3300005458 Bacteria 50502
43 Ga0070681_10017906 3300005458 Bacteria 7081
44 Ga0068867_100032384 3300005459 Bacteria 3781
45 Ga0070706_100000032 3300005467 Bacteria 152892
46 Ga0070706_100004246 3300005467 Bacteria 13905
47 Ga0070706_100004309 3300005467 Bacteria 13780
48 Ga0070707_100000287 3300005468 Bacteria 49584
49 Ga0070707_100002863 3300005468 Bacteria 16421
50 Ga0070698_100000017 3300005471 Bacteria 107963
51 Ga0070698_100002443 3300005471 Bacteria 20482
52 Ga0070698_100004925 3300005471 Bacteria 14647
53 Ga0070698_100018635 3300005471 Bacteria 7307
54 Ga0070698_100022269 3300005471 Bacteria 6630
55 Ga0070698_100043106 3300005471 Bacteria 4628
56 Ga0070698_100062768 3300005471 Unclassified 3748
57 Ga0070699_100003547 3300005518 Bacteria 13791
58 Ga0070679_100000011 3300005530 Bacteria 162902
59 Ga0070679_100023775 3300005530 Bacteria 6003
60 Ga0070697_100000524 3300005536 Bacteria 28854
61 Ga0070697_100007224 3300005536 Bacteria 8639
62 Ga0070697_100008756 3300005536 Bacteria 7899
63 Ga0070697_100022076 3300005536 Bacteria 5050
64 Ga0068853_100013667 3300005539 Bacteria 6634
65 Ga0070672_100073210 3300005543 Unclassified 2730
66 Ga0070686_100001356 3300005544 Bacteria 13844
67 Ga0070665_100076700 3300005548 Bacteria 3349
68 Ga0070704_100019437 3300005549 Bacteria 4365
69 Ga0070664_100003060 3300005564 Bacteria 13522
70 Ga0068856_100025707 3300005614 Bacteria 5741
71 Ga0068859_100037537 3300005617 Bacteria 4862
72 Ga0068859_100073492 3300005617 Bacteria 3457
73 Ga0068859_100084975 3300005617 Bacteria 3209
74 Ga0068859_100086154 3300005617 Bacteria 3187
75 Ga0068861_100001442 3300005719 Bacteria 15035
76 Ga0068861_100041366 3300005719 Bacteria 3452
77 Ga0068851_10000321 3300005834 Bacteria 21720
78 Ga0068863_100012347 3300005841 Bacteria 8248
79 Ga0068858_100000026 3300005842 Bacteria 153013
80 Ga0068860_100008619 3300005843 Bacteria 10163
81 Ga0068860_100035811 3300005843 Bacteria 4759
82 Ga0068862_100003819 3300005844 Bacteria 12826
83 Ga0068862_100029521 3300005844 Bacteria 4620
84 Ga0081539_10000119 3300005985 Bacteria 184136
85 Ga0081539_10000390 3300005985 Bacteria 94524
86 Ga0081539_10000510 3300005985 Bacteria 80736
87 Ga0081539_10001016 3300005985 Bacteria 51656
88 Ga0070715_10000022 3300006163 Bacteria 118193
89 Ga0070716_100000012 3300006173 Bacteria 104713
90 Ga0097621_100011983 3300006237 Bacteria 6417
91 Ga0097621_100014380 3300006237 Bacteria 5922
92 Ga0068871_100009127 3300006358 Bacteria 7167
93 Ga0075433_10046371 3300006852 Bacteria 3780
94 Ga0075429_100054769 3300006880 Bacteria 3469
95 Ga0075436_100000011 3300006914 Bacteria 208094
96 Ga0075436_100057730 3300006914 Bacteria 2680
97 Ga0097620_100037537 3300006931 Bacteria 4862
98 Ga0097620_100073492 3300006931 Bacteria 3457
99 Ga0097620_100084974 3300006931 Bacteria 3209
100 Ga0097620_100086152 3300006931 Bacteria 3187
101 Ga0075435_100000934 3300007076 Bacteria 18441
102 Ga0099794_10016494 3300007265 Bacteria 3275
103 Ga0111539_10028108 3300009094 Bacteria 6866
104 Ga0111539_10058322 3300009094 Bacteria 4580
105 Ga0105247_10000033 3300009101 Bacteria 184433
106 Ga0105247_10003836 3300009101 Bacteria 9726
107 Ga0114129_10012287 3300009147 Bacteria 12183
108 Ga0114129_10111033 3300009147 Unclassified 3784
109 Ga0114129_10218033 3300009147 Bacteria 2576
110 Ga0105243_10000107 3300009148 Bacteria 95426
111 Ga0105243_10012464 3300009148 Bacteria 6426
112 Ga0105242_10000026 3300009176 Bacteria 108155
113 Ga0105242_10004597 3300009176 Bacteria 10700
114 Ga0105242_10005501 3300009176 Bacteria 9780
115 Ga0105248_10007583 3300009177 Bacteria 11919
116 Ga0105248_10050251 3300009177 Bacteria 4676
117 Ga0105237_10000623 3300009545 Bacteria 49504
118 Ga0105238_10002542 3300009551 Bacteria 18230
119 Ga0105238_10030165 3300009551 Bacteria 5519
120 Ga0105249_10000381 3300009553 Bacteria 44082
121 Ga0105249_10107903 3300009553 Unclassified 2628
122 Ga0105239_10015409 3300010375 Bacteria 8470
123 Ga0157378_10000011 3300013297 Bacteria 158889
124 Ga0157378_10016936 3300013297 Bacteria 6389
125 Ga0163162_10000023 3300013306 Bacteria 193395
126 Ga0163162_10009850 3300013306 Bacteria 9295
127 Ga0163162_10021666 3300013306 Bacteria 6331
128 Ga0163162_10030577 3300013306 Bacteria 5336
129 Ga0163162_10034386 3300013306 Bacteria 5044
130 Ga0157372_10036411 3300013307 Bacteria 5424
131 Ga0157375_10005052 3300013308 Bacteria 11450
132 Ga0157375_10015097 3300013308 Bacteria 6909
133 Ga0157375_10020350 3300013308 Bacteria 6060
134 Ga0163163_10000280 3300014325 Bacteria 50796
135 Ga0163163_10085664 3300014325 Unclassified 3159
136 Ga0157380_10010038 3300014326 Bacteria 6795
137 Ga0213876_10000142 3300021384 Bacteria 77431
138 Ga0213876_10000712 3300021384 Bacteria 23349
139 Ga0207672_1000303 3300025223 Bacteria 6650
140 Ga0207697_10012915 3300025315 Bacteria 3492
141 Ga0207656_10001999 3300025321 Bacteria 6799
142 Ga0207653_10000019 3300025885 Bacteria 138019
143 Ga0207710_10000001 3300025900 Bacteria 1797433
144 Ga0207685_10000015 3300025905 Bacteria 170813
145 Ga0207684_10000065 3300025910 Bacteria 194463
146 Ga0207684_10008224 3300025910 Bacteria 9290
147 Ga0207684_10027596 3300025910 Bacteria 4836
148 Ga0207707_10000028 3300025912 Bacteria 167115
149 Ga0207707_10075371 3300025912 Bacteria 2943
150 Ga0207671_10001989 3300025914 Bacteria 22543
151 Ga0207660_10000138 3300025917 Bacteria 43790
152 Ga0207649_10050069 3300025920 Unclassified 2583
153 Ga0207652_10000403 3300025921 Bacteria 45057
154 Ga0207646_10005585 3300025922 Bacteria 13208
155 Ga0207681_10001758 3300025923 Bacteria 13915
156 Ga0207694_10006160 3300025924 Bacteria 9165
157 Ga0207650_10000080 3300025925 Bacteria 129319
158 Ga0207650_10003526 3300025925 Bacteria 10745
159 Ga0207686_10000015 3300025934 Bacteria 202118
160 Ga0207686_10000397 3300025934 Bacteria 30302
161 Ga0207686_10005966 3300025934 Bacteria 6540
162 Ga0207709_10000043 3300025935 Bacteria 248179
163 Ga0207709_10001356 3300025935 Bacteria 17213
164 Ga0207670_10001828 3300025936 Bacteria 11094
165 Ga0207665_10000048 3300025939 Bacteria 76446
166 Ga0207691_10086867 3300025940 Unclassified 2806
167 Ga0207711_10080830 3300025941 Bacteria 2839
168 Ga0207689_10001826 3300025942 Bacteria 20118
169 Ga0207689_10011610 3300025942 Bacteria 7547
170 Ga0207689_10011946 3300025942 Bacteria 7442
171 Ga0207679_10005426 3300025945 Bacteria 7987
172 Ga0207712_10000214 3300025961 Bacteria 57860
173 Ga0207677_10001406 3300026023 Bacteria 12823
174 Ga0207703_10000110 3300026035 Bacteria 96947
175 Ga0207708_10000063 3300026075 Bacteria 87390
176 Ga0207708_10002437 3300026075 Bacteria 13670
177 Ga0207708_10017800 3300026075 Bacteria 5347
178 Ga0207641_10031276 3300026088 Bacteria 4414
179 Ga0207641_10035850 3300026088 Bacteria 4136
180 Ga0207648_10051663 3300026089 Bacteria 3593
181 Ga0207648_10079671 3300026089 Bacteria 2857
182 Ga0207676_10006332 3300026095 Bacteria 8361
183 Ga0207676_10040628 3300026095 Bacteria 3565
184 Ga0207676_10047248 3300026095 Unclassified 3335
185 Ga0207674_10000006 3300026116 Bacteria 233530
186 Ga0207675_100003289 3300026118 Bacteria 15823
187 Ga0207675_100006456 3300026118 Bacteria 11104
188 Ga0207675_100042707 3300026118 Bacteria 4233
189 Ga0207675_100045275 3300026118 Bacteria 4111
190 Ga0207683_10042092 3300026121 Bacteria 3989
191 Ga0207428_10001269 3300027907 Bacteria 26994
192 Ga0207428_10009099 3300027907 Bacteria 8927
193 Ga0268265_10018935 3300028380 Bacteria 4780
194 Ga0268264_10019702 3300028381 Bacteria 5511
195 Ga0307513_10001536 3300031456 Bacteria 33067
196 Ga0307408_100013335 3300031548 Bacteria 5454
197 Ga0307405_10004574 3300031731 Bacteria 6561
198 Ga0307413_10005378 3300031824 Bacteria 5711
199 Ga0307406_10004190 3300031901 Bacteria 7847
200 Ga0307416_100008144 3300032002 Bacteria 6734
201 Ga0307414_10001904 3300032004 Bacteria 10794
202 Ga0307415_100005055 3300032126 Bacteria 6945
203 Ga0373951_0001954 3300035091 Bacteria 5292
204 Ga0395900_0264466 3300037418 Unclassified 1717
205 Ga0395905_0101986 3300037471 Bacteria 2694
206 Ga0436365_0086484 3300039437 Bacteria 49148
207 Ga0436365_0087353 3300039437 Bacteria 57993
208 Ga0495663_0001666 3300046525 Bacteria 6927
209 Ga0495598_0000017 3300046537 Bacteria 26422
210 Ga0495621_0000082 3300046539 Bacteria 19369
211 Ga0496104_0009524 3300048907 Bacteria 8646
212 Ga0496106_0019904 3300048909 Bacteria 4977
213 Ga0496106_0059137 3300048909 Bacteria 2903
214 Ga0501217_000112 3300049661 Bacteria 10476
215 Ga0501223_000198 3300049663 Bacteria 15829
216 Ga0501235_001902 3300049669 Bacteria 4464
217 Ga0501225_0002519 3300049705 Bacteria 5666
218 nmdc:mga05p37_28373_c1 3300050507 Bacteria 6825
219 nmdc:mga05p37_97851_c1 3300050507 Bacteria 3614
220 nmdc:mga08y16_7994_c1 3300050511 Bacteria 11067
221 nmdc:mga0rr50_224_c1 3300050513 Bacteria 30578
222 nmdc:mga08x19_13_c1 3300050514 Bacteria 366166
223 nmdc:mga08x19_60928_c1 3300050514 Bacteria 2445
224 nmdc:mga0a205_43267_c1 3300050515 Bacteria 4343
225 nmdc:mga0a205_56102_c1 3300050515 Bacteria 3804
226 Ga0500616_0004189 3300053153 Bacteria 10395
227 Ga0070708_100026477
228 CNAas_1001062
229 JGI24748J21848_1000003
230 JGI24034J26672_10000005
231 JGI24751J29686_10000018
232 JGI24751J29686_10000077
233 Ga0065714_10064449
234 Ga0065704_10005161
235 Ga0065704_10008781
236 Ga0065712_10003876
237 Ga0065712_10067741
238 Ga0065715_10012650
239 Ga0065715_10089234
240 Ga0065715_10103153
241 Ga0070670_100000260
242 Ga0070670_100006760
243 Ga0070670_100019623
244 Ga0068869_100010625
245 Ga0068869_100029281
246 Ga0068869_100046455
247 Ga0070680_100000106
248 Ga0070682_100000081
249 Ga0070682_100009758
250 Ga0068868_100008479
251 Ga0070660_100033630
252 Ga0070689_100000807
253 Ga0070661_100014076
254 Ga0070668_100009733
255 Ga0070669_100002691
256 Ga0070669_100003003
257 Ga0070675_100030486
258 Ga0070675_100039730
259 Ga0070671_100003198
260 Ga0070674_100059096
261 Ga0070703_10000094
262 Ga0070700_100003898
263 Ga0070700_100033247
264 Ga0070694_100009083
265 Ga0070694_100012829
266 Ga0070708_100000002
267 Ga0070662_100043099
268 Ga0070681_10000162
269 Ga0070681_10017906
270 Ga0068867_100032384
271 Ga0070706_100000032
272 Ga0070706_100004246
273 Ga0070706_100004309
274 Ga0070707_100000287
275 Ga0070707_100002863
276 Ga0070698_100000017
277 Ga0070698_100002443
278 Ga0070698_100004925
279 Ga0070698_100018635
280 Ga0070698_100022269
281 Ga0070698_100043106
282 Ga0070698_100062768
283 Ga0070699_100003547
284 Ga0070679_100000011
285 Ga0070679_100023775
286 Ga0070697_100000524
287 Ga0070697_100007224
288 Ga0070697_100008756
289 Ga0070697_100022076
290 Ga0068853_100013667
291 Ga0070672_100073210
292 Ga0070686_100001356
293 Ga0070665_100076700
294 Ga0070704_100019437
295 Ga0070664_100003060
296 Ga0068856_100025707
297 Ga0068859_100037537
298 Ga0068859_100073492
299 Ga0068859_100084975
300 Ga0068859_100086154
301 Ga0068861_100001442
302 Ga0068861_100041366
303 Ga0068851_10000321
304 Ga0068863_100012347
305 Ga0068858_100000026
306 Ga0068860_100008619
307 Ga0068860_100035811
308 Ga0068862_100003819
309 Ga0068862_100029521
310 Ga0081539_10000119
311 Ga0081539_10000390
312 Ga0081539_10000510
313 Ga0081539_10001016
314 Ga0070715_10000022
315 Ga0070716_100000012
316 Ga0097621_100011983
317 Ga0097621_100014380
318 Ga0068871_100009127
319 Ga0075433_10046371
320 Ga0075429_100054769
321 Ga0075436_100000011
322 Ga0075436_100057730
323 Ga0097620_100037537
324 Ga0097620_100073492
325 Ga0097620_100084974
326 Ga0097620_100086152
327 Ga0075435_100000934
328 Ga0099794_10016494
329 Ga0111539_10028108
330 Ga0111539_10058322
331 Ga0105247_10000033
332 Ga0105247_10003836
333 Ga0114129_10012287
334 Ga0114129_10111033
335 Ga0114129_10218033
336 Ga0105243_10000107
337 Ga0105243_10012464
338 Ga0105242_10000026
339 Ga0105242_10004597
340 Ga0105242_10005501
341 Ga0105248_10007583
342 Ga0105248_10050251
343 Ga0105237_10000623
344 Ga0105238_10002542
345 Ga0105238_10030165
346 Ga0105249_10000381
347 Ga0105249_10107903
348 Ga0105239_10015409
349 Ga0157378_10000011
350 Ga0157378_10016936
351 Ga0163162_10000023
352 Ga0163162_10009850
353 Ga0163162_10021666
354 Ga0163162_10030577
355 Ga0163162_10034386
356 Ga0157372_10036411
357 Ga0157375_10005052
358 Ga0157375_10015097
359 Ga0157375_10020350
360 Ga0163163_10000280
361 Ga0163163_10085664
362 Ga0157380_10010038
363 Ga0213876_10000142
364 Ga0213876_10000712
365 Ga0207672_1000303
366 Ga0207697_10012915
367 Ga0207656_10001999
368 Ga0207653_10000019
369 Ga0207710_10000001
370 Ga0207685_10000015
371 Ga0207684_10000065
372 Ga0207684_10008224
373 Ga0207684_10027596
374 Ga0207707_10000028
375 Ga0207707_10075371
376 Ga0207671_10001989
377 Ga0207660_10000138
378 Ga0207649_10050069
379 Ga0207652_10000403
380 Ga0207646_10005585
381 Ga0207681_10001758
382 Ga0207694_10006160
383 Ga0207650_10000080
384 Ga0207650_10003526
385 Ga0207686_10000015
386 Ga0207686_10000397
387 Ga0207686_10005966
388 Ga0207709_10000043
389 Ga0207709_10001356
390 Ga0207670_10001828
391 Ga0207665_10000048
392 Ga0207691_10086867
393 Ga0207711_10080830
394 Ga0207689_10001826
395 Ga0207689_10011610
396 Ga0207689_10011946
397 Ga0207679_10005426
398 Ga0207712_10000214
399 Ga0207677_10001406
400 Ga0207703_10000110
401 Ga0207708_10000063
402 Ga0207708_10002437
403 Ga0207708_10017800
404 Ga0207641_10031276
405 Ga0207641_10035850
406 Ga0207648_10051663
407 Ga0207648_10079671
408 Ga0207676_10006332
409 Ga0207676_10040628
410 Ga0207676_10047248
411 Ga0207674_10000006
412 Ga0207675_100003289
413 Ga0207675_100006456
414 Ga0207675_100042707
415 Ga0207675_100045275
416 Ga0207683_10042092
417 Ga0207428_10001269
418 Ga0207428_10009099
419 Ga0268265_10018935
420 Ga0268264_10019702
421 Ga0307513_10001536
422 Ga0307408_100013335
423 Ga0307405_10004574
424 Ga0307413_10005378
425 Ga0307406_10004190
426 Ga0307416_100008144
427 Ga0307414_10001904
428 Ga0307415_100005055
429 Ga0373951_0001954
430 Ga0395900_0264466
431 Ga0395905_0101986
432 Ga0436365_0086484
433 Ga0436365_0087353
434 Ga0495663_0001666
435 Ga0495598_0000017
436 Ga0495621_0000082
437 Ga0496104_0009524
438 Ga0496106_0019904
439 Ga0496106_0059137
440 Ga0501217_000112
441 Ga0501223_000198
442 Ga0501235_001902
443 Ga0501225_0002519
444 nmdc:mga05p37_28373_c1
445 nmdc:mga05p37_97851_c1
446 nmdc:mga08y16_7994_c1
447 nmdc:mga0rr50_224_c1
448 nmdc:mga08x19_13_c1
449 nmdc:mga08x19_60928_c1
450 nmdc:mga0a205_43267_c1
451 nmdc:mga0a205_56102_c1
452 Ga0500616_0004189

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13510

Fer2_4

2Fe-2S iron-sulfur cluster binding domain

17

95

0.96

PF22117

Nqo3_Fer4

NADH-quinone oxidoreductase subunit 3, ferredoxin-like domain

154

219

0.95

PF10588

NADH-G_4Fe-4S_3

NADH-ubiquinone oxidoreductase-G iron-sulfur binding region

101

140

0.92

PF00111

Fer2

2Fe-2S iron-sulfur cluster binding domain

22

110

0.89

PF04879

Molybdop_Fe4S4

Molybdopterin oxidoreductase Fe4S4 domain

232

288

0.89

PF00384

Molybdopterin

Molybdopterin oxidoreductase

291

645

0.81

PF12838

Fer4_7

4Fe-4S dicluster domain

163

217

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2iv2-assembly1.cif.gz_X reinterpretation of reduced form of formate dehydrogenase h from e. coli 0.8774 208 670
2nap-assembly1.cif.gz_A dissimilatory nitrate reductase (nap) from desulfovibrio desulfuricans 0.8703 210 671
2jiq-assembly1.cif.gz_A a new catalytic mechanism of periplasmic nitrate reductase from desulfovibrio desulfuricans atcc 27774 from crystallographic and epr data and based on detailed analysis of the sixth ligand 0.8701 209 662
1h0h-assembly2.cif.gz_K tungsten containing formate dehydrogenase from desulfovibrio gigas 0.8612 204 622
7bkb-assembly1.cif.gz_D formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) 0.8469 208 657
ID Description Score Start End Superfamily
af_Q60314_222_377_3.40.50.740 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8717 504 641 3.40.50.740
af_A0A1D8PU51_533_649_3.40.50.740 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8544 532 647 3.40.50.740
af_Q94511_249_539_3.40.228.10 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.8372 199 514 3.40.228.10
af_P9WIV9_488_688_3.40.50.740 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8276 524 641 3.40.50.740
af_Q94511_249_539_3.40.228.10 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.8266 199 514 3.40.228.10
ID Description Score Start End GO Terms
AF-A0A2D3WLU9-F1-model_v4 Formate dehydrogenase subunit alpha 0.911 208 662 GO:0003954
GO:0008863
GO:0015942
GO:0016020
GO:0022904
GO:0042597
GO:0043546
GO:0046872
GO:0051539
AF-A0A7J4NCE7-F1-model_v4 Molybdopterin-dependent oxidoreductase 0.9077 323 656 GO:0003954
GO:0016020
GO:0022904
GO:0043546
GO:0046872
GO:0051536
AF-A0A3M1F083-F1-model_v4 Formate dehydrogenase subunit alpha 0.9058 209 662 GO:0003954
GO:0016020
GO:0022904
GO:0046872
GO:0051539
AF-A0A0P6YX53-F1-model_v4 Formate dehydrogenase 0.8997 211 662 GO:0003954
GO:0008863
GO:0015942
GO:0016020
GO:0022904
GO:0043546
GO:0046872
GO:0051539
AF-A0A7W5VHG2-F1-model_v4 Formate dehydrogenase major subunit (EC 1.17.1.9) 0.8967 267 662 GO:0003954
GO:0008863
GO:0016020
GO:0022904
GO:0043546
GO:0046872
GO:0051536

Map