F338460

General Info

Members Datasets Scaffolds Average Seq Length
226 165 452 244

Family's Representative Sequence

Representative Sequence 3300005293|Ga0065715_10220271|Ga0065715_102202711
Length 274
Sequence MLQHIDPGALSYRRNGSISTESALDGCDEAMSERVDHVARPRHIAIIMDGNGRWASARGLPRSAGHRQGVDALRRTVRAAIELGIEYLTIFSFSSENWSRPHTEISFLFDLIRRFVRQDVAELHSAGVRITVIGEREGLDPDIISLIEQTEALTRDNTGLNLVVAFNYGGRQEIVRAARAIARAAAAGELALDMITPELIERELHTEKIPDPDLLIRTGGEQRLSNYLLWQCAYTEFVFVDEHWPDFTRETLERAISEYLTRERRFGGLAARSA

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003349 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM Metagenome Rhizosphere
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
77 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
82 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
83 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
84 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
85 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
86 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
91 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
92 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
96 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
101 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
102 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
105 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
108 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
109 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
110 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
111 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
112 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
113 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
114 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
115 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
116 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
117 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
118 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
152 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
155 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
156 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
157 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
161 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
164 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
165 2854911287 Brucella lupini LUP21 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.12
Metatranscriptomes 0
Isolates 0.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.95
Nodule 0
Rhizoplane 2.65
Rhizosphere 73.89
Stem 0
Stem Tuber 0
Unclassified 0.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10220271 3300005293 Bacteria 1275
2 JGI25158J39367_1002173 3300002739 Bacteria 3271
3 JGI25153J46596_10018137 3300003215 Bacteria 2745
4 JGI26129J50193_1002346 3300003349 Bacteria 1329
5 Ga0055526_1010256 3300003771 Bacteria 4382
6 Ga0055530_10016882 3300003791 Bacteria 2307
7 Ga0055530_10019181 3300003791 Bacteria 2079
8 Ga0070658_10000564 3300005327 Bacteria 32228
9 Ga0070658_10000599 3300005327 Bacteria 31234
10 Ga0070658_10167793 3300005327 Bacteria 1843
11 Ga0070690_100028127 3300005330 Bacteria 3481
12 Ga0070670_100167124 3300005331 Bacteria 1908
13 Ga0068869_100082485 3300005334 Bacteria 2403
14 Ga0070666_10213123 3300005335 Bacteria 1361
15 Ga0070660_100079536 3300005339 Bacteria 2572
16 Ga0070660_100179730 3300005339 Bacteria 1712
17 Ga0070668_100060896 3300005347 Bacteria 2924
18 Ga0070667_100039076 3300005367 Bacteria 3977
19 Ga0070705_100493785 3300005440 Bacteria 928
20 Ga0070708_100057678 3300005445 Bacteria 3458
21 Ga0070706_100130202 3300005467 Bacteria 2348
22 Ga0070699_100247737 3300005518 Bacteria 1591
23 Ga0070697_100012090 3300005536 Bacteria 6759
24 Ga0070697_100541361 3300005536 Bacteria 1020
25 Ga0068853_100385132 3300005539 Bacteria 1310
26 Ga0070672_100281701 3300005543 Bacteria 1406
27 Ga0070686_100137480 3300005544 Bacteria 1697
28 Ga0070696_100032607 3300005546 Bacteria 3574
29 Ga0070665_100396421 3300005548 Bacteria 1388
30 Ga0068855_100072238 3300005563 Bacteria 4011
31 Ga0068851_10124848 3300005834 Bacteria 1387
32 Ga0068858_100038605 3300005842 Bacteria 4430
33 Ga0068860_100186549 3300005843 Bacteria 2006
34 Ga0068862_100551629 3300005844 Bacteria 1100
35 Ga0068862_100685719 3300005844 Bacteria 991
36 Ga0081455_10000114 3300005937 Bacteria 91800
37 Ga0081455_10148714 3300005937 Bacteria 1808
38 Ga0081540_1000412 3300005983 Bacteria 42235
39 Ga0081539_10005207 3300005985 Bacteria 13483
40 Ga0075364_10031607 3300006051 Bacteria 3400
41 Ga0075362_10094592 3300006177 Bacteria 1390
42 Ga0075367_10012792 3300006178 Bacteria 4491
43 Ga0075366_10063414 3300006195 Bacteria 2197
44 Ga0075366_10247872 3300006195 Bacteria 1086
45 Ga0075370_10138528 3300006353 Bacteria 1422
46 Ga0075370_10362108 3300006353 Bacteria 867
47 Ga0068871_100302609 3300006358 Bacteria 1404
48 Ga0075428_100180699 3300006844 Bacteria 2283
49 Ga0075431_100003292 3300006847 Bacteria 15637
50 Ga0075433_10006288 3300006852 Bacteria 9377
51 Ga0105240_10058511 3300009093 Bacteria 4811
52 Ga0111539_10005055 3300009094 Bacteria 17135
53 Ga0111539_10052804 3300009094 Bacteria 4838
54 Ga0111539_10094213 3300009094 Bacteria 3518
55 Ga0111539_10718468 3300009094 Bacteria 1163
56 Ga0114129_10025819 3300009147 Bacteria 8321
57 Ga0114129_10048762 3300009147 Bacteria 5952
58 Ga0114129_10053816 3300009147 Bacteria 5645
59 Ga0114129_10363945 3300009147 Bacteria 1913
60 Ga0114129_10901188 3300009147 Bacteria 1120
61 Ga0105242_10066565 3300009176 Bacteria 2976
62 Ga0105248_10002249 3300009177 Bacteria 21375
63 Ga0105237_10019171 3300009545 Bacteria 7067
64 Ga0105237_10205595 3300009545 Bacteria 1969
65 Ga0105239_10009732 3300010375 Bacteria 10806
66 Ga0163163_10075954 3300014325 Bacteria 3354
67 Ga0209564_1003556 3300025295 Bacteria 10461
68 Ga0209050_1000845 3300025298 Bacteria 41783
69 Ga0209256_1002500 3300025299 Bacteria 14836
70 Ga0209051_1027857 3300025303 Bacteria 2243
71 Ga0207645_10024182 3300025907 Bacteria 3941
72 Ga0207705_10000533 3300025909 Bacteria 32213
73 Ga0207705_10002947 3300025909 Bacteria 13009
74 Ga0207707_10276515 3300025912 Bacteria 1455
75 Ga0207695_10473225 3300025913 Bacteria 1135
76 Ga0207671_10007587 3300025914 Bacteria 9389
77 Ga0207671_10114985 3300025914 Bacteria 2051
78 Ga0207671_10190754 3300025914 Bacteria 1598
79 Ga0207693_10250773 3300025915 Bacteria 1389
80 Ga0207657_10086486 3300025919 Bacteria 2624
81 Ga0207657_10284012 3300025919 Bacteria 1313
82 Ga0207650_10146058 3300025925 Bacteria 1863
83 Ga0207706_10119769 3300025933 Bacteria 2314
84 Ga0207706_10412720 3300025933 Bacteria 1170
85 Ga0207689_10283619 3300025942 Bacteria 1372
86 Ga0207712_10588800 3300025961 Bacteria 961
87 Ga0207668_10324884 3300025972 Bacteria 1278
88 Ga0207658_10094956 3300025986 Bacteria 2322
89 Ga0207703_10027216 3300026035 Bacteria 4503
90 Ga0207708_10314641 3300026075 Bacteria 1276
91 Ga0207702_10826546 3300026078 Bacteria 916
92 Ga0207698_10215192 3300026142 Bacteria 1732
93 Ga0209967_1001291 3300027364 Bacteria 3211
94 Ga0207428_10042446 3300027907 Bacteria 3678
95 Ga0268266_10177749 3300028379 Bacteria 1936
96 Ga0268265_10649461 3300028380 Bacteria 1014
97 Ga0268264_10221262 3300028381 Bacteria 1743
98 Ga0268264_10453854 3300028381 Bacteria 1242
99 Ga0265322_10007523 3300028654 Bacteria 3176
100 Ga0307517_10130871 3300028786 Bacteria 1807
101 Ga0307515_10001556 3300028794 Bacteria 51178
102 Ga0307515_10002666 3300028794 Bacteria 38241
103 Ga0307515_10018155 3300028794 Bacteria 12760
104 Ga0307515_10318932 3300028794 Bacteria 1222
105 Ga0265338_10000109 3300028800 Bacteria 152826
106 Ga0307408_100013090 3300031548 Bacteria 5506
107 Ga0307408_100189280 3300031548 Bacteria 1657
108 Ga0307508_10000017 3300031616 Bacteria 203567
109 Ga0307514_10005393 3300031649 Bacteria 11450
110 Ga0316575_10000678 3300031665 Bacteria 10123
111 Ga0316579_10004082 3300031691 Bacteria 5765
112 Ga0316579_10019563 3300031691 Bacteria 2993
113 Ga0316576_10188695 3300031727 Bacteria 1554
114 Ga0316578_10207401 3300031728 Bacteria 1179
115 Ga0307516_10022322 3300031730 Bacteria 6501
116 Ga0316577_10031911 3300031733 Bacteria 2943
117 Ga0307416_100493939 3300032002 Bacteria 1287
118 Ga0307416_100527943 3300032002 Bacteria 1250
119 Ga0316585_10028869 3300032137 Bacteria 1736
120 Ga0373943_0353244 3300035170 Bacteria 843
121 Ga0316574_0022173 3300035398 Bacteria 3780
122 Ga0316574_0075708 3300035398 Bacteria 2132
123 Ga0373931_0002371 3300035691 Bacteria 8334
124 Ga0373937_0469797 3300036401 Bacteria 1195
125 Ga0316582_0012485 3300036647 Bacteria 4744
126 Ga0316582_0091662 3300036647 Bacteria 2001
127 Ga0316582_0214174 3300036647 Bacteria 1316
128 Ga0316584_0045301 3300036712 Bacteria 3283
129 Ga0316584_0085384 3300036712 Bacteria 2363
130 Ga0316584_0406284 3300036712 Bacteria 969
131 Ga0395905_0749246 3300037471 Bacteria 879
132 Ga0316581_0010408 3300037588 Bacteria 2578
133 Ga0436364_0462159 3300037853 Bacteria 13329
134 Ga0400490_58259 3300038726 Unclassified 1001
135 Ga0400488_04781 3300038741 Bacteria 3769
136 Ga0400487_17787 3300039110 Bacteria 3104
137 Ga0436365_0665609 3300039437 Bacteria 1529
138 Ga0436363_1117049 3300039450 Bacteria 2915
139 Ga0439466_0054543 3300041411 Bacteria 1302
140 Ga0439465_0060245 3300041413 Bacteria 1257
141 Ga0451789_0379188 3300041443 Bacteria 1086
142 Ga0451791_1883072 3300041451 Bacteria 875
143 Ga0451793_1932603 3300041452 Bacteria 2548
144 Ga0451795_0896691 3300041456 Bacteria 825
145 Ga0451807_1451095 3300041486 Bacteria 1694
146 Ga0451833_1340800 3300041491 Bacteria 1592
147 Ga0451835_1219272 3300041492 Bacteria 1111
148 Ga0451839_0761248 3300041496 Bacteria 835
149 Ga0451849_0421726 3300041505 Bacteria 830
150 Ga0439448_0003434 3300042005 Bacteria 4389
151 Ga0439450_008838 3300042008 Bacteria 1892
152 Ga0439460_0000921 3300042461 Bacteria 6734
153 Ga0451577_0001801 3300042876 Bacteria 27422
154 Ga0451577_0020545 3300042876 Bacteria 6057
155 Ga0451577_0055939 3300042876 Bacteria 3519
156 Ga0451577_0074588 3300042876 Bacteria 3025
157 Ga0466972_0000060 3300044658 Bacteria 109789
158 Ga0466972_0236592 3300044658 Bacteria 854
159 Ga0466966_0120404 3300044684 Bacteria 1612
160 Ga0466961_0132919 3300044693 Bacteria 1559
161 Ga0453684_0000035 3300044712 Bacteria 725956
162 Ga0453684_0000115 3300044712 Bacteria 355501
163 Ga0453684_0000512 3300044712 Bacteria 150627
164 Ga0453684_0002492 3300044712 Bacteria 44480
165 Ga0453684_0011703 3300044712 Bacteria 14633
166 Ga0453684_0378334 3300044712 Bacteria 1590
167 Ga0453684_0498699 3300044712 Bacteria 1348
168 Ga0453684_0892505 3300044712 Bacteria 952
169 Ga0466957_0120272 3300044842 Bacteria 1673
170 Ga0451576_0000029 3300045051 Bacteria 404449
171 Ga0451576_0000461 3300045051 Bacteria 92083
172 Ga0451576_0009499 3300045051 Bacteria 11270
173 Ga0495632_0068463 3300046519 Bacteria 1710
174 Ga0495625_0005094 3300046660 Bacteria 12158
175 Ga0495671_0068972 3300046692 Bacteria 1738
176 Ga0496100_0506640 3300048903 Bacteria 930
177 Ga0496116_0005204 3300048919 Bacteria 12184
178 Ga0496121_0006160 3300048924 Bacteria 15056
179 Ga0496122_0000019 3300048925 Bacteria 411199
180 Ga0496122_0051905 3300048925 Bacteria 3110
181 Ga0496123_0034486 3300048926 Bacteria 3624
182 Ga0496126_0000874 3300048929 Bacteria 53049
183 Ga0496126_0086667 3300048929 Bacteria 2760
184 Ga0501032_0368577 3300049569 Bacteria 924
185 Ga0501033_0017525 3300049570 Bacteria 5411
186 Ga0501034_0024746 3300049571 Bacteria 6108
187 Ga0501034_0098123 3300049571 Bacteria 2926
188 Ga0501036_0090536 3300049572 Bacteria 2584
189 Ga0501037_0063198 3300049573 Bacteria 2699
190 Ga0501043_0047734 3300049579 Bacteria 3366
191 Ga0501047_0031326 3300049581 Bacteria 5128
192 Ga0501047_0499095 3300049581 Bacteria 1044
193 Ga0501068_0102015 3300049584 Bacteria 1779
194 Ga0501070_0017266 3300049586 Bacteria 6059
195 Ga0501070_0020814 3300049586 Bacteria 5503
196 Ga0501070_0078576 3300049586 Bacteria 2730
197 Ga0501073_0234757 3300049589 Bacteria 1267
198 Ga0501075_0185805 3300049591 Bacteria 1585
199 Ga0501080_0070885 3300049742 Bacteria 3241
200 Ga0501081_0630177 3300049743 Bacteria 803
201 Ga0501035_0004205 3300049822 Bacteria 13679
202 Ga0501035_0028741 3300049822 Bacteria 5073
203 Ga0501044_0032482 3300049823 Bacteria 5487
204 Ga0501045_0101530 3300049824 Bacteria 2130
205 nmdc:mga03683_13539_c1 3300050489 Bacteria 3005
206 nmdc:mga03683_152483_c1 3300050489 Bacteria 1043
207 nmdc:mga0k408_119347_c1 3300050493 Bacteria 1561
208 nmdc:mga0k408_119454_c1 3300050493 Bacteria 1081
209 nmdc:mga0k408_143364_c1 3300050493 Bacteria 1422
210 nmdc:mga06z11_3539_c1 3300050494 Bacteria 6054
211 nmdc:mga07m45_508086_c1 3300050496 Bacteria 698
212 nmdc:mga05p37_34042_c1 3300050507 Bacteria 6240
213 nmdc:mga05p37_964593_c1 3300050507 Bacteria 911
214 nmdc:mga05p37_97301_c1 3300050507 Bacteria 3625
215 nmdc:mga09592_574155_c1 3300050508 Bacteria 968
216 nmdc:mga0qj67_166902_c1 3300050509 Bacteria 1787
217 nmdc:mga06r32_42568_c1 3300050510 Bacteria 4318
218 nmdc:mga06r32_47647_c1 3300050510 Bacteria 4095
219 nmdc:mga08y16_41847_c1 3300050511 Bacteria 4798
220 nmdc:mga08y16_58791_c1 3300050511 Bacteria 3508
221 Ga0500644_0015457 3300053088 Bacteria 2177
222 Ga0500577_0001684 3300053142 Bacteria 5655
223 Ga0500616_0002652 3300053153 Bacteria 14552
224 Ga0500587_000048 3300053739 Bacteria 9890
225 2587755150 2585428062 Bacteria 6842168
226 2854912089 2854911287 Bacteria 5582813
227 Ga0065715_10220271
228 JGI25158J39367_1002173
229 JGI25153J46596_10018137
230 JGI26129J50193_1002346
231 Ga0055526_1010256
232 Ga0055530_10016882
233 Ga0055530_10019181
234 Ga0070658_10000564
235 Ga0070658_10000599
236 Ga0070658_10167793
237 Ga0070690_100028127
238 Ga0070670_100167124
239 Ga0068869_100082485
240 Ga0070666_10213123
241 Ga0070660_100079536
242 Ga0070660_100179730
243 Ga0070668_100060896
244 Ga0070667_100039076
245 Ga0070705_100493785
246 Ga0070708_100057678
247 Ga0070706_100130202
248 Ga0070699_100247737
249 Ga0070697_100012090
250 Ga0070697_100541361
251 Ga0068853_100385132
252 Ga0070672_100281701
253 Ga0070686_100137480
254 Ga0070696_100032607
255 Ga0070665_100396421
256 Ga0068855_100072238
257 Ga0068851_10124848
258 Ga0068858_100038605
259 Ga0068860_100186549
260 Ga0068862_100551629
261 Ga0068862_100685719
262 Ga0081455_10000114
263 Ga0081455_10148714
264 Ga0081540_1000412
265 Ga0081539_10005207
266 Ga0075364_10031607
267 Ga0075362_10094592
268 Ga0075367_10012792
269 Ga0075366_10063414
270 Ga0075366_10247872
271 Ga0075370_10138528
272 Ga0075370_10362108
273 Ga0068871_100302609
274 Ga0075428_100180699
275 Ga0075431_100003292
276 Ga0075433_10006288
277 Ga0105240_10058511
278 Ga0111539_10005055
279 Ga0111539_10052804
280 Ga0111539_10094213
281 Ga0111539_10718468
282 Ga0114129_10025819
283 Ga0114129_10048762
284 Ga0114129_10053816
285 Ga0114129_10363945
286 Ga0114129_10901188
287 Ga0105242_10066565
288 Ga0105248_10002249
289 Ga0105237_10019171
290 Ga0105237_10205595
291 Ga0105239_10009732
292 Ga0163163_10075954
293 Ga0209564_1003556
294 Ga0209050_1000845
295 Ga0209256_1002500
296 Ga0209051_1027857
297 Ga0207645_10024182
298 Ga0207705_10000533
299 Ga0207705_10002947
300 Ga0207707_10276515
301 Ga0207695_10473225
302 Ga0207671_10007587
303 Ga0207671_10114985
304 Ga0207671_10190754
305 Ga0207693_10250773
306 Ga0207657_10086486
307 Ga0207657_10284012
308 Ga0207650_10146058
309 Ga0207706_10119769
310 Ga0207706_10412720
311 Ga0207689_10283619
312 Ga0207712_10588800
313 Ga0207668_10324884
314 Ga0207658_10094956
315 Ga0207703_10027216
316 Ga0207708_10314641
317 Ga0207702_10826546
318 Ga0207698_10215192
319 Ga0209967_1001291
320 Ga0207428_10042446
321 Ga0268266_10177749
322 Ga0268265_10649461
323 Ga0268264_10221262
324 Ga0268264_10453854
325 Ga0265322_10007523
326 Ga0307517_10130871
327 Ga0307515_10001556
328 Ga0307515_10002666
329 Ga0307515_10018155
330 Ga0307515_10318932
331 Ga0265338_10000109
332 Ga0307408_100013090
333 Ga0307408_100189280
334 Ga0307508_10000017
335 Ga0307514_10005393
336 Ga0316575_10000678
337 Ga0316579_10004082
338 Ga0316579_10019563
339 Ga0316576_10188695
340 Ga0316578_10207401
341 Ga0307516_10022322
342 Ga0316577_10031911
343 Ga0307416_100493939
344 Ga0307416_100527943
345 Ga0316585_10028869
346 Ga0373943_0353244
347 Ga0316574_0022173
348 Ga0316574_0075708
349 Ga0373931_0002371
350 Ga0373937_0469797
351 Ga0316582_0012485
352 Ga0316582_0091662
353 Ga0316582_0214174
354 Ga0316584_0045301
355 Ga0316584_0085384
356 Ga0316584_0406284
357 Ga0395905_0749246
358 Ga0316581_0010408
359 Ga0436364_0462159
360 Ga0400490_58259
361 Ga0400488_04781
362 Ga0400487_17787
363 Ga0436365_0665609
364 Ga0436363_1117049
365 Ga0439466_0054543
366 Ga0439465_0060245
367 Ga0451789_0379188
368 Ga0451791_1883072
369 Ga0451793_1932603
370 Ga0451795_0896691
371 Ga0451807_1451095
372 Ga0451833_1340800
373 Ga0451835_1219272
374 Ga0451839_0761248
375 Ga0451849_0421726
376 Ga0439448_0003434
377 Ga0439450_008838
378 Ga0439460_0000921
379 Ga0451577_0001801
380 Ga0451577_0020545
381 Ga0451577_0055939
382 Ga0451577_0074588
383 Ga0466972_0000060
384 Ga0466972_0236592
385 Ga0466966_0120404
386 Ga0466961_0132919
387 Ga0453684_0000035
388 Ga0453684_0000115
389 Ga0453684_0000512
390 Ga0453684_0002492
391 Ga0453684_0011703
392 Ga0453684_0378334
393 Ga0453684_0498699
394 Ga0453684_0892505
395 Ga0466957_0120272
396 Ga0451576_0000029
397 Ga0451576_0000461
398 Ga0451576_0009499
399 Ga0495632_0068463
400 Ga0495625_0005094
401 Ga0495671_0068972
402 Ga0496100_0506640
403 Ga0496116_0005204
404 Ga0496121_0006160
405 Ga0496122_0000019
406 Ga0496122_0051905
407 Ga0496123_0034486
408 Ga0496126_0000874
409 Ga0496126_0086667
410 Ga0501032_0368577
411 Ga0501033_0017525
412 Ga0501034_0024746
413 Ga0501034_0098123
414 Ga0501036_0090536
415 Ga0501037_0063198
416 Ga0501043_0047734
417 Ga0501047_0031326
418 Ga0501047_0499095
419 Ga0501068_0102015
420 Ga0501070_0017266
421 Ga0501070_0020814
422 Ga0501070_0078576
423 Ga0501073_0234757
424 Ga0501075_0185805
425 Ga0501080_0070885
426 Ga0501081_0630177
427 Ga0501035_0004205
428 Ga0501035_0028741
429 Ga0501044_0032482
430 Ga0501045_0101530
431 nmdc:mga03683_13539_c1
432 nmdc:mga03683_152483_c1
433 nmdc:mga0k408_119347_c1
434 nmdc:mga0k408_119454_c1
435 nmdc:mga0k408_143364_c1
436 nmdc:mga06z11_3539_c1
437 nmdc:mga07m45_508086_c1
438 nmdc:mga05p37_34042_c1
439 nmdc:mga05p37_964593_c1
440 nmdc:mga05p37_97301_c1
441 nmdc:mga09592_574155_c1
442 nmdc:mga0qj67_166902_c1
443 nmdc:mga06r32_42568_c1
444 nmdc:mga06r32_47647_c1
445 nmdc:mga08y16_41847_c1
446 nmdc:mga08y16_58791_c1
447 Ga0500644_0015457
448 Ga0500577_0001684
449 Ga0500616_0002652
450 Ga0500587_000048
451 2587755150
452 2854912089

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01255

Prenyltransf

Putative undecaprenyl diphosphate synthase

47

267

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1x09-assembly1.cif.gz_A crystal structure of the d26a mutant upps in complex with magnesium and isopentenyl pyrophosphate 0.9638 18 234
1x07-assembly1.cif.gz_A crystal structure of undecaprenyl pyrophosphate synthase in complex with mg and ipp 0.9602 17 235
6szg-assembly1.cif.gz_A acinetobacter baumannii undecaprenyl pyrophosphate synthase (ab-upps) in complex with gr839 and gsk513 0.9573 16 231
4onc-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis decaprenyl diphosphate synthase in complex with bph-640 0.9499 15 232
2dtn-assembly1.cif.gz_B crystal structure of helicobacter pylori undecaprenyl pyrophosphate synthase complexed with pyrophosphate 0.9437 18 240
ID Description Score Start End Superfamily
af_Q03175_40_291_3.40.1180.10 Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like 0.9506 16 231 3.40.1180.10
af_Q8LAR7_18_264_3.40.1180.10 Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like 0.95 16 232 3.40.1180.10
5hc7A00 Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like 0.9492 15 234 3.40.1180.10
af_O14171_12_259_3.40.1180.10 Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like 0.9482 16 232 3.40.1180.10
af_Q54EN3_89_346_3.40.1180.10 Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like 0.9442 16 232 3.40.1180.10
ID Description Score Start End GO Terms
AF-A0A2S9REF4-F1-model_v4 deleted 0.994 16 146
AF-A0A7W0N335-F1-model_v4 Di-trans,poly-cis-decaprenylcistransferase (EC 2.5.1.31) 0.9847 24 147 GO:0008834
GO:0016094
GO:0045547
AF-A0A3D0SWK2-F1-model_v4 Di-trans,poly-cis-decaprenylcistransferase 0.9803 25 156 GO:0000287
GO:0005829
GO:0008834
GO:0016094
GO:0045547
AF-A0A3C0PPZ8-F1-model_v4 Di-trans,poly-cis-decaprenylcistransferase 0.9799 16 130 GO:0016094
GO:0045547
AF-A0A382KT12-F1-model_v4 Di-trans,poly-cis-decaprenylcistransferase 0.9796 24 143 GO:0016094
GO:0045547

Map