F338294

General Info

Members Datasets Scaffolds Average Seq Length
225 156 448 438

Family's Representative Sequence

Representative Sequence 3300053136|Ga0500559_0026586|Ga0500559_0026586_189_1553
Length 454
Sequence MRISVTGCGYLGAVHAASMAELGHEVVGIDVDRAKIEVLSAGLSPFFEPGLTEILTSAMASGRLTFTTDAAAARGAQVHFIAVGTPQRKGESAADLTYVEAAITGLLPHLSEGDLVAGKSTVPVGTASRLAARVAESGSGAMLAWNPEFLREGFAVQDTIAPDRLVYGLPPEPAEREHAKALLDEVYERAISRATPVVETDFATAELVKAAANAFLATKISFINAMAEITEVVGADVTKLADAIGYDARIGRRFLNAGIGFGGGCLPKDIRAFAARAEELGRGESLSFLREVDAINLRRRERVVEMVIEELGGQVFEKKVAVLGLAFKPDSDDIRDSPALDVAIRLNGLGAHVIATDPEAIPNSIRLHPQLGFATDTEDALHGADAVVLVTEWNEYRTLDPRAVAELARGRVVIDGRNTLDADAWTAAGWTYRGMGTPRRESSLVLELEEALLA

Samples

Sample ID Description Type Environment
1 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
65 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
66 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
71 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
72 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
73 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
74 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
78 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
79 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
80 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
81 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
82 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
83 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
84 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
85 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
86 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
87 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
88 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
89 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
90 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
91 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
92 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
93 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
104 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
111 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
112 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
113 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
114 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
115 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
126 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
143 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
144 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
145 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
146 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
147 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
148 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
149 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
150 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
151 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
152 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
153 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
154 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
155 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
156 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92
Metatranscriptomes 1.33
Isolates 6.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.22
Nodule 0
Rhizoplane 14.22
Rhizosphere 72.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500559_0026586 3300053136 Bacteria 2466
2 LJQas_1002315 3300000549 Bacteria 2672
3 LJQas_1005872 3300000549 Bacteria 1542
4 JGI24740J21852_10002201 3300001979 Bacteria 8914
5 JGI24735J21928_10000275 3300002067 Bacteria 17956
6 Ga0006562J51391_1065703 3300003578 Bacteria 2430
7 Ga0070658_10005824 3300005327 Bacteria 9985
8 Ga0070658_10119955 3300005327 Bacteria 2185
9 Ga0070683_100004062 3300005329 Bacteria 11988
10 Ga0070683_100004459 3300005329 Bacteria 11548
11 Ga0070670_100040535 3300005331 Bacteria 4003
12 Ga0070680_100015873 3300005336 Bacteria 5913
13 Ga0070682_100003426 3300005337 Bacteria 8793
14 Ga0070669_100040952 3300005353 Bacteria 3368
15 Ga0070675_100023676 3300005354 Bacteria 4912
16 Ga0070674_100040311 3300005356 Bacteria 3158
17 Ga0070667_100046723 3300005367 Bacteria 3642
18 Ga0070678_100043090 3300005456 Bacteria 3212
19 Ga0070681_10059526 3300005458 Bacteria 3799
20 Ga0070679_100015915 3300005530 Bacteria 7240
21 Ga0070684_100004495 3300005535 Bacteria 10614
22 Ga0070684_100190736 3300005535 Bacteria 1865
23 Ga0070672_100022082 3300005543 Bacteria 4667
24 Ga0070665_100013725 3300005548 Bacteria 8153
25 Ga0068857_100233986 3300005577 Bacteria 1681
26 Ga0068858_100038735 3300005842 Bacteria 4422
27 Ga0068860_100022233 3300005843 Bacteria 6139
28 Ga0075365_10019211 3300006038 Bacteria 4215
29 Ga0105251_10009977 3300009011 Bacteria 5555
30 Ga0105245_10004065 3300009098 Bacteria 12996
31 Ga0105239_10044351 3300010375 Bacteria 4876
32 Ga0105246_10000992 3300011119 Bacteria 16307
33 Ga0157370_10313337 3300013104 Bacteria 1448
34 Ga0157369_10096478 3300013105 Bacteria 3154
35 Ga0157369_10096544 3300013105 Bacteria 3153
36 Ga0163162_10015739 3300013306 Bacteria 7392
37 Ga0157375_10115697 3300013308 Bacteria 2785
38 Ga0163163_10175658 3300014325 Bacteria 2188
39 Ga0163163_10418425 3300014325 Bacteria 1399
40 Ga0157379_10103014 3300014968 Bacteria 2561
41 Ga0206353_11754452 3300020082 Bacteria 2223
42 Ga0206353_11808224 3300020082 Bacteria 6696
43 Ga0209677_100788 3300025253 Bacteria 15939
44 Ga0207713_1028085 3300025735 Bacteria 2543
45 Ga0207647_10007937 3300025904 Bacteria 7631
46 Ga0207645_10005087 3300025907 Bacteria 9627
47 Ga0207643_10034249 3300025908 Bacteria 2845
48 Ga0207707_10047280 3300025912 Bacteria 3747
49 Ga0207652_10125916 3300025921 Bacteria 2282
50 Ga0207650_10046702 3300025925 Bacteria 3189
51 Ga0207659_10189171 3300025926 Bacteria 1637
52 Ga0207687_10006198 3300025927 Bacteria 7917
53 Ga0207691_10002726 3300025940 Bacteria 17257
54 Ga0207661_10003538 3300025944 Bacteria 10849
55 Ga0207661_10014491 3300025944 Bacteria 5780
56 Ga0207679_10059949 3300025945 Bacteria 2825
57 Ga0207667_10080215 3300025949 Bacteria 3381
58 Ga0207674_10033292 3300026116 Bacteria 5396
59 Ga0207675_100211892 3300026118 Bacteria 1864
60 Ga0207683_10004697 3300026121 Bacteria 11773
61 Ga0207683_10062200 3300026121 Bacteria 3287
62 Ga0268266_10033476 3300028379 Bacteria 4368
63 Ga0268264_10019091 3300028381 Bacteria 5605
64 Ga0307405_10149381 3300031731 Bacteria 1641
65 Ga0307410_10021815 3300031852 Bacteria 3945
66 Ga0307409_100250912 3300031995 Bacteria 1618
67 Ga0307416_100027945 3300032002 Bacteria 4187
68 Ga0395900_0022352 3300037418 Bacteria 6470
69 Ga0395900_0114871 3300037418 Bacteria 2763
70 Ga0395901_0203267 3300038443 Bacteria 2076
71 Ga0451577_0182898 3300042876 Bacteria 1890
72 Ga0466961_0095635 3300044693 Bacteria 1873
73 Ga0466963_0108322 3300044694 Bacteria 1906
74 Ga0466964_0004366 3300044706 Bacteria 5215
75 Ga0466971_0067494 3300044719 Bacteria 1621
76 Ga0466970_0000027 3300044765 Bacteria 56103
77 Ga0466957_0016032 3300044842 Bacteria 4380
78 Ga0466957_0104153 3300044842 Bacteria 1792
79 Ga0451576_0043403 3300045051 Bacteria 4745
80 Ga0466967_0022193 3300045976 Bacteria 5173
81 Ga0466967_0056948 3300045976 Bacteria 3448
82 Ga0466967_0066660 3300045976 Bacteria 3208
83 Ga0466967_0273799 3300045976 Bacteria 1618
84 Ga0495641_0067689 3300046461 Bacteria 1606
85 Ga0495653_0004179 3300046463 Bacteria 11684
86 Ga0495582_0033252 3300046473 Bacteria 2834
87 Ga0495662_0002460 3300046476 Bacteria 9329
88 Ga0495664_0013795 3300046477 Bacteria 4582
89 Ga0495594_0013612 3300046499 Bacteria 4250
90 Ga0495630_0035162 3300046517 Bacteria 3744
91 Ga0495631_0014329 3300046518 Bacteria 3831
92 Ga0495643_0096073 3300046522 Bacteria 1524
93 Ga0495665_0003224 3300046531 Bacteria 8828
94 Ga0495586_0005755 3300046535 Bacteria 6628
95 Ga0495587_0008958 3300046536 Bacteria 6422
96 Ga0495645_0001405 3300046543 Bacteria 16237
97 Ga0495667_0000603 3300046559 Bacteria 22905
98 Ga0495656_0015163 3300046615 Bacteria 2904
99 Ga0495588_0010345 3300046674 Bacteria 4337
100 Ga0495657_0017054 3300046675 Bacteria 5279
101 Ga0495623_0051823 3300046679 Bacteria 2595
102 Ga0495670_0005557 3300046691 Bacteria 6185
103 Ga0495604_0100897 3300047317 Bacteria 2121
104 Ga0495636_0002653 3300047318 Bacteria 6900
105 Ga0495680_0036599 3300047322 Bacteria 3939
106 Ga0495675_0007164 3300047444 Bacteria 6865
107 Ga0495685_028216 3300047447 Bacteria 1931
108 Ga0496100_0039584 3300048903 Bacteria 2994
109 Ga0496101_0027693 3300048904 Bacteria 3950
110 Ga0496101_0130296 3300048904 Bacteria 1909
111 Ga0496102_0044470 3300048905 Bacteria 4030
112 Ga0496102_0146382 3300048905 Bacteria 2217
113 Ga0496102_0179798 3300048905 Bacteria 1993
114 Ga0496102_0206290 3300048905 Bacteria 1853
115 Ga0496103_0012780 3300048906 Bacteria 4980
116 Ga0496103_0050092 3300048906 Bacteria 2583
117 Ga0496105_0143482 3300048908 Bacteria 1965
118 Ga0496105_0173895 3300048908 Bacteria 1765
119 Ga0496106_0014765 3300048909 Bacteria 5774
120 Ga0496106_0029928 3300048909 Bacteria 4059
121 Ga0496107_0007029 3300048910 Bacteria 7753
122 Ga0496107_0131991 3300048910 Bacteria 1844
123 Ga0496108_0015851 3300048911 Bacteria 6144
124 Ga0496108_0047653 3300048911 Bacteria 3582
125 Ga0496109_0030291 3300048912 Bacteria 4850
126 Ga0496109_0054558 3300048912 Bacteria 3646
127 Ga0496109_0086490 3300048912 Bacteria 2895
128 Ga0496110_0003622 3300048913 Bacteria 11882
129 Ga0496111_0007772 3300048914 Bacteria 7060
130 Ga0496111_0037137 3300048914 Bacteria 3486
131 Ga0496111_0084838 3300048914 Bacteria 2315
132 Ga0496112_0129111 3300048915 Bacteria 2498
133 Ga0496113_0082147 3300048916 Bacteria 2471
134 Ga0496114_0030517 3300048917 Bacteria 4435
135 Ga0496114_0081922 3300048917 Bacteria 2727
136 Ga0496114_0117185 3300048917 Bacteria 2288
137 Ga0496114_0246183 3300048917 Bacteria 1573
138 Ga0496115_0032472 3300048918 Bacteria 4118
139 Ga0496115_0070822 3300048918 Bacteria 2827
140 Ga0496117_0000048 3300048920 Bacteria 295908
141 Ga0496117_0060637 3300048920 Bacteria 2605
142 Ga0496119_0000600 3300048922 Bacteria 48758
143 Ga0496120_0021466 3300048923 Bacteria 4081
144 Ga0496122_0000243 3300048925 Bacteria 122429
145 Ga0496122_0001340 3300048925 Bacteria 40206
146 Ga0496122_0002759 3300048925 Bacteria 24239
147 Ga0496123_0000003 3300048926 Bacteria 866556
148 Ga0496123_0003180 3300048926 Bacteria 18746
149 Ga0496123_0073146 3300048926 Bacteria 2128
150 Ga0496124_0007716 3300048927 Bacteria 11376
151 Ga0496125_0000015 3300048928 Bacteria 516648
152 Ga0496125_0000085 3300048928 Bacteria 218570
153 Ga0496125_0001823 3300048928 Bacteria 29442
154 Ga0496125_0005736 3300048928 Bacteria 13663
155 Ga0496125_0099917 3300048928 Bacteria 2141
156 Ga0501031_0005047 3300049568 Bacteria 8585
157 Ga0501032_0007703 3300049569 Bacteria 7851
158 Ga0501034_0125231 3300049571 Bacteria 2555
159 Ga0501034_0171151 3300049571 Bacteria 2139
160 Ga0501034_0255438 3300049571 Bacteria 1696
161 Ga0501036_0001760 3300049572 Bacteria 16834
162 Ga0501036_0055369 3300049572 Bacteria 3360
163 Ga0501036_0144991 3300049572 Bacteria 2003
164 Ga0501037_0023220 3300049573 Bacteria 4586
165 Ga0501037_0023936 3300049573 Bacteria 4515
166 Ga0501038_0032812 3300049574 Bacteria 4577
167 Ga0501042_0026860 3300049578 Bacteria 4045
168 Ga0501047_0021272 3300049581 Bacteria 6227
169 Ga0501047_0025686 3300049581 Bacteria 5664
170 Ga0501047_0064814 3300049581 Bacteria 3523
171 Ga0501048_0032202 3300049582 Bacteria 3789
172 Ga0501067_0001720 3300049583 Bacteria 12023
173 Ga0501067_0006223 3300049583 Bacteria 6616
174 Ga0501068_0084040 3300049584 Bacteria 1957
175 Ga0501070_0015699 3300049586 Bacteria 6367
176 Ga0501070_0021492 3300049586 Bacteria 5414
177 Ga0501070_0086065 3300049586 Bacteria 2602
178 Ga0501070_0097519 3300049586 Bacteria 2431
179 Ga0501072_0067336 3300049588 Bacteria 2825
180 Ga0501072_0108647 3300049588 Bacteria 2207
181 Ga0501073_0064749 3300049589 Bacteria 2549
182 Ga0501073_0069988 3300049589 Bacteria 2444
183 Ga0501073_0103707 3300049589 Bacteria 1974
184 Ga0501074_0001253 3300049590 Bacteria 16766
185 Ga0501074_0016807 3300049590 Bacteria 5309
186 Ga0501077_0004803 3300049593 Bacteria 8214
187 Ga0501077_0103799 3300049593 Bacteria 1801
188 Ga0501079_0133616 3300049741 Bacteria 1931
189 Ga0501080_0011474 3300049742 Bacteria 8112
190 Ga0501080_0018873 3300049742 Bacteria 6386
191 Ga0501080_0028879 3300049742 Bacteria 5163
192 Ga0501080_0155120 3300049742 Bacteria 2115
193 Ga0501083_0090905 3300049744 Bacteria 2015
194 Ga0501083_0110438 3300049744 Bacteria 1808
195 Ga0501035_0009623 3300049822 Bacteria 8988
196 Ga0501035_0046991 3300049822 Bacteria 3878
197 Ga0501035_0072126 3300049822 Bacteria 3057
198 Ga0501035_0089254 3300049822 Bacteria 2715
199 Ga0501044_0012693 3300049823 Bacteria 9124
200 Ga0501044_0061736 3300049823 Bacteria 3833
201 Ga0501044_0066389 3300049823 Bacteria 3678
202 Ga0501044_0155024 3300049823 Bacteria 2270
203 Ga0501045_0010895 3300049824 Bacteria 6370
204 nmdc:mga00v17_107896_c1 3300050491 Bacteria 1764
205 Ga0500616_0000040 3300053153 Bacteria 367604
206 Ga0501084_0012990 3300054114 Bacteria 6892
207 Ga0501082_0017878 3300060353 Bacteria 6107
208 Ga0501082_0042282 3300060353 Bacteria 3928
209 Ga0466962_0035233 3300061719 Bacteria 2396
210 2644504875 2643221690 Bacteria 4654705
211 2644527195 2643221694 Bacteria 4392972
212 2644667761 2643221722 Bacteria 4247614
213 2808629623 2808606306 Bacteria 3608896
214 2808873256 2808606365 Bacteria 4301966
215 2808875231 2808606365 Bacteria 4301966
216 2812362519 2811994880 Bacteria 4147780
217 2844841405 2844841374 Bacteria 3917147
218 2844852914 2844852863 Bacteria 3849151
219 2852646410 2852643534 Bacteria 3013378
220 2870628624 2870628048 Bacteria 3696012
221 2884996759 2884994152 Bacteria 4492978
222 8054108672 8054107350 Bacteria 5022511
223 8056038198 8056037122 Bacteria 3854319
224 8057345925 8057345674 Bacteria 4160394
225 Ga0500559_0026586
226 LJQas_1002315
227 LJQas_1005872
228 JGI24740J21852_10002201
229 JGI24735J21928_10000275
230 Ga0006562J51391_1065703
231 Ga0070658_10005824
232 Ga0070658_10119955
233 Ga0070683_100004062
234 Ga0070683_100004459
235 Ga0070670_100040535
236 Ga0070680_100015873
237 Ga0070682_100003426
238 Ga0070669_100040952
239 Ga0070675_100023676
240 Ga0070674_100040311
241 Ga0070667_100046723
242 Ga0070678_100043090
243 Ga0070681_10059526
244 Ga0070679_100015915
245 Ga0070684_100004495
246 Ga0070684_100190736
247 Ga0070672_100022082
248 Ga0070665_100013725
249 Ga0068857_100233986
250 Ga0068858_100038735
251 Ga0068860_100022233
252 Ga0075365_10019211
253 Ga0105251_10009977
254 Ga0105245_10004065
255 Ga0105239_10044351
256 Ga0105246_10000992
257 Ga0157370_10313337
258 Ga0157369_10096478
259 Ga0157369_10096544
260 Ga0163162_10015739
261 Ga0157375_10115697
262 Ga0163163_10175658
263 Ga0163163_10418425
264 Ga0157379_10103014
265 Ga0206353_11754452
266 Ga0206353_11808224
267 Ga0209677_100788
268 Ga0207713_1028085
269 Ga0207647_10007937
270 Ga0207645_10005087
271 Ga0207643_10034249
272 Ga0207707_10047280
273 Ga0207652_10125916
274 Ga0207650_10046702
275 Ga0207659_10189171
276 Ga0207687_10006198
277 Ga0207691_10002726
278 Ga0207661_10003538
279 Ga0207661_10014491
280 Ga0207679_10059949
281 Ga0207667_10080215
282 Ga0207674_10033292
283 Ga0207675_100211892
284 Ga0207683_10004697
285 Ga0207683_10062200
286 Ga0268266_10033476
287 Ga0268264_10019091
288 Ga0307405_10149381
289 Ga0307410_10021815
290 Ga0307409_100250912
291 Ga0307416_100027945
292 Ga0395900_0022352
293 Ga0395900_0114871
294 Ga0395901_0203267
295 Ga0451577_0182898
296 Ga0466961_0095635
297 Ga0466963_0108322
298 Ga0466964_0004366
299 Ga0466971_0067494
300 Ga0466970_0000027
301 Ga0466957_0016032
302 Ga0466957_0104153
303 Ga0451576_0043403
304 Ga0466967_0022193
305 Ga0466967_0056948
306 Ga0466967_0066660
307 Ga0466967_0273799
308 Ga0495641_0067689
309 Ga0495653_0004179
310 Ga0495582_0033252
311 Ga0495662_0002460
312 Ga0495664_0013795
313 Ga0495594_0013612
314 Ga0495630_0035162
315 Ga0495631_0014329
316 Ga0495643_0096073
317 Ga0495665_0003224
318 Ga0495586_0005755
319 Ga0495587_0008958
320 Ga0495645_0001405
321 Ga0495667_0000603
322 Ga0495656_0015163
323 Ga0495588_0010345
324 Ga0495657_0017054
325 Ga0495623_0051823
326 Ga0495670_0005557
327 Ga0495604_0100897
328 Ga0495636_0002653
329 Ga0495680_0036599
330 Ga0495675_0007164
331 Ga0495685_028216
332 Ga0496100_0039584
333 Ga0496101_0027693
334 Ga0496101_0130296
335 Ga0496102_0044470
336 Ga0496102_0146382
337 Ga0496102_0179798
338 Ga0496102_0206290
339 Ga0496103_0012780
340 Ga0496103_0050092
341 Ga0496105_0143482
342 Ga0496105_0173895
343 Ga0496106_0014765
344 Ga0496106_0029928
345 Ga0496107_0007029
346 Ga0496107_0131991
347 Ga0496108_0015851
348 Ga0496108_0047653
349 Ga0496109_0030291
350 Ga0496109_0054558
351 Ga0496109_0086490
352 Ga0496110_0003622
353 Ga0496111_0007772
354 Ga0496111_0037137
355 Ga0496111_0084838
356 Ga0496112_0129111
357 Ga0496113_0082147
358 Ga0496114_0030517
359 Ga0496114_0081922
360 Ga0496114_0117185
361 Ga0496114_0246183
362 Ga0496115_0032472
363 Ga0496115_0070822
364 Ga0496117_0000048
365 Ga0496117_0060637
366 Ga0496119_0000600
367 Ga0496120_0021466
368 Ga0496122_0000243
369 Ga0496122_0001340
370 Ga0496122_0002759
371 Ga0496123_0000003
372 Ga0496123_0003180
373 Ga0496123_0073146
374 Ga0496124_0007716
375 Ga0496125_0000015
376 Ga0496125_0000085
377 Ga0496125_0001823
378 Ga0496125_0005736
379 Ga0496125_0099917
380 Ga0501031_0005047
381 Ga0501032_0007703
382 Ga0501034_0125231
383 Ga0501034_0171151
384 Ga0501034_0255438
385 Ga0501036_0001760
386 Ga0501036_0055369
387 Ga0501036_0144991
388 Ga0501037_0023220
389 Ga0501037_0023936
390 Ga0501038_0032812
391 Ga0501042_0026860
392 Ga0501047_0021272
393 Ga0501047_0025686
394 Ga0501047_0064814
395 Ga0501048_0032202
396 Ga0501067_0001720
397 Ga0501067_0006223
398 Ga0501068_0084040
399 Ga0501070_0015699
400 Ga0501070_0021492
401 Ga0501070_0086065
402 Ga0501070_0097519
403 Ga0501072_0067336
404 Ga0501072_0108647
405 Ga0501073_0064749
406 Ga0501073_0069988
407 Ga0501073_0103707
408 Ga0501074_0001253
409 Ga0501074_0016807
410 Ga0501077_0004803
411 Ga0501077_0103799
412 Ga0501079_0133616
413 Ga0501080_0011474
414 Ga0501080_0018873
415 Ga0501080_0028879
416 Ga0501080_0155120
417 Ga0501083_0090905
418 Ga0501083_0110438
419 Ga0501035_0009623
420 Ga0501035_0046991
421 Ga0501035_0072126
422 Ga0501035_0089254
423 Ga0501044_0012693
424 Ga0501044_0061736
425 Ga0501044_0066389
426 Ga0501044_0155024
427 Ga0501045_0010895
428 nmdc:mga00v17_107896_c1
429 Ga0500616_0000040
430 Ga0501084_0012990
431 Ga0501082_0017878
432 Ga0501082_0042282
433 Ga0466962_0035233
434 2644504875
435 2644527195
436 2644667761
437 2808629623
438 2808873256
439 2808875231
440 2812362519
441 2844841405
442 2844852914
443 2852646410
444 2870628624
445 2884996759
446 8054108672
447 8056038198
448 8057345925

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03720

UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

321

422

0.98

PF00984

UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

203

298

0.95

PF03721

UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

1

183

0.95

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

2

144

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ryi-assembly1.cif.gz_A structure of glycine oxidase with bound inhibitor glycolate 0.9578 2 31
4a7p-assembly1.cif.gz_A-2 se-met derivatized ugdg, udp-glucose dehydrogenase from sphingomonas elodea 0.9555 2 437
6j39-assembly1.cif.gz_B-2 crystal structure of cmis2 with inhibitor 0.9545 3 32
4a7p-assembly2.cif.gz_B-2 se-met derivatized ugdg, udp-glucose dehydrogenase from sphingomonas elodea 0.952 1 437
3hzl-assembly1.cif.gz_A tyr258phe mutant of nikd, an unusual amino acid oxidase essential for nikkomycin biosynthesis: open form at 1.55a resolution 0.9508 3 31
ID Description Score Start End Superfamily
af_O07248_235_441_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9727 233 437 3.40.50.720
af_A4HWA7_1_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9654 2 31 3.50.50.60
af_O07248_235_441_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9588 233 437 3.40.50.720
af_O07248_1_202_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9562 1 200 3.40.50.720
af_O07248_1_202_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9423 1 200 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A838WV55-F1-model_v4 UDP-glucose 6-dehydrogenase 0.9963 1 73 GO:0016616
GO:0051287
AF-A0A0K8QA83-F1-model_v4 UDP-glucose 6-dehydrogenase TuaD 0.9943 305 435 GO:0016616
GO:0051287
AF-A0A251XFJ4-F1-model_v4 UDP-glucose 6-dehydrogenase YwqF 0.9909 353 437 GO:0016616
GO:0051287
AF-A0A1F1Z3W9-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain-containing protein 0.9908 353 437 GO:0016616
GO:0051287
AF-A0A1Q4AUB3-F1-model_v4 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) 0.9853 1 437 GO:0000271
GO:0003979
GO:0006065
GO:0051287

Map