F338187

General Info

Members Datasets Scaffolds Average Seq Length
225 167 450 202

Family's Representative Sequence

Representative Sequence 3300048922|Ga0496119_0070599|Ga0496119_0070599_1244_1945
Length 233
Sequence MFTGIVEDLGEVRDVEQLGDFARIHVLSSVVTSDARPGDSICVNGVCLTVTALTGAPPGLSGPGRAGYAGFAADVMGETLARTSLKGLAPGTRVNLERSVRLEDRLGGHLVQGHVDGTGEIVSRDPQFSPGGMTPRTPPATPDGEANISGADWEVVRISLPADLARYVVHKGSIAVDGISLTVSAIGADWLEVSLIPETLKRTTLGLTQPGGTVNLEVDVIAKYVEKLAGGAR

Samples

Sample ID Description Type Environment
1 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
69 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
73 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
74 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
101 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
102 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
103 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
106 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
107 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
108 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300031615 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
114 3300031667 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
115 3300031678 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
116 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
117 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
118 3300031815 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Unclassified
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
121 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
122 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
123 3300036458 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
126 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
127 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
128 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
129 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
130 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
131 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
132 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
133 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
134 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
154 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
155 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
160 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
161 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
162 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
165 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
167 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.11
Metatranscriptomes 8.44
Isolates 0.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.22
Nodule 0
Rhizoplane 3.11
Rhizosphere 84.89
Stem 0
Stem Tuber 0
Unclassified 4.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496119_0070599 3300048922 Bacteria 2048
2 Ga0058863_11867056 3300004799 Bacteria 864
3 Ga0070658_10043857 3300005327 Bacteria 3614
4 Ga0070683_100125187 3300005329 Bacteria 2429
5 Ga0070683_100307267 3300005329 Bacteria 1509
6 Ga0070670_100459863 3300005331 Bacteria 1129
7 Ga0068869_100730886 3300005334 Bacteria 846
8 Ga0070680_100204698 3300005336 Bacteria 1664
9 Ga0070689_100736281 3300005340 Bacteria 863
10 Ga0070692_10390220 3300005345 Bacteria 876
11 Ga0070675_100233898 3300005354 Bacteria 1604
12 Ga0070674_100437630 3300005356 Bacteria 1076
13 Ga0070714_100478988 3300005435 Bacteria 1185
14 Ga0070714_100684918 3300005435 Bacteria 988
15 Ga0070713_100318630 3300005436 Bacteria 1435
16 Ga0070713_100392619 3300005436 Bacteria 1294
17 Ga0070705_100068046 3300005440 Bacteria 2142
18 Ga0070663_100083831 3300005455 Bacteria 2348
19 Ga0070678_100283857 3300005456 Bacteria 1401
20 Ga0070662_100097505 3300005457 Bacteria 2219
21 Ga0070681_10176340 3300005458 Bacteria 2059
22 Ga0070681_11132998 3300005458 Unclassified 703
23 Ga0070685_10690708 3300005466 Bacteria 743
24 Ga0070684_100193739 3300005535 Bacteria 1850
25 Ga0068853_100834925 3300005539 Bacteria 883
26 Ga0070665_100045239 3300005548 Bacteria 4421
27 Ga0070665_100086364 3300005548 Unclassified 3142
28 Ga0068857_100006291 3300005577 Bacteria 10159
29 Ga0068857_100382784 3300005577 Bacteria 1307
30 Ga0068856_100637152 3300005614 Bacteria 1087
31 Ga0068859_100010724 3300005617 Bacteria 9222
32 Ga0068859_100107818 3300005617 Bacteria 2846
33 Ga0068864_100166931 3300005618 Bacteria 2005
34 Ga0068863_100279006 3300005841 Bacteria 1619
35 Ga0068863_100416796 3300005841 Bacteria 1315
36 Ga0068858_100962482 3300005842 Bacteria 836
37 Ga0068858_101073543 3300005842 Bacteria 790
38 Ga0068860_100011013 3300005843 Bacteria 8917
39 Ga0068862_100341166 3300005844 Bacteria 1388
40 Ga0081455_10118459 3300005937 Bacteria 2090
41 Ga0075365_10003161 3300006038 Bacteria 8405
42 Ga0075368_10006752 3300006042 Bacteria 4030
43 Ga0075364_10000982 3300006051 Bacteria 15077
44 Ga0075432_10114516 3300006058 Bacteria 1008
45 Ga0070712_100256859 3300006175 Bacteria 1399
46 Ga0075362_10006724 3300006177 Bacteria 4298
47 Ga0075367_10106292 3300006178 Bacteria 1720
48 Ga0075367_10241367 3300006178 Bacteria 1132
49 Ga0075369_10040318 3300006186 Bacteria 1995
50 Ga0075366_10153859 3300006195 Bacteria 1393
51 Ga0075370_10074772 3300006353 Bacteria 1942
52 Ga0068871_100154580 3300006358 Bacteria 1958
53 Ga0075428_100000003 3300006844 Bacteria 365483
54 Ga0075433_10082879 3300006852 Bacteria 2829
55 Ga0075434_100005397 3300006871 Bacteria 11632
56 Ga0075434_100187410 3300006871 Bacteria 2089
57 Ga0075434_100508703 3300006871 Bacteria 1225
58 Ga0075436_100018756 3300006914 Bacteria 4738
59 Ga0097620_100010724 3300006931 Bacteria 9222
60 Ga0097620_100107815 3300006931 Bacteria 2846
61 Ga0075435_100000498 3300007076 Bacteria 23940
62 Ga0075435_100007372 3300007076 Bacteria 7834
63 Ga0075435_100131062 3300007076 Bacteria 2098
64 Ga0075435_100516400 3300007076 Bacteria 1033
65 Ga0105240_10708534 3300009093 Bacteria 1098
66 Ga0111539_10000001 3300009094 Bacteria 1035431
67 Ga0105245_10089635 3300009098 Bacteria 2828
68 Ga0105245_10425516 3300009098 Bacteria 1332
69 Ga0105245_10982583 3300009098 Bacteria 888
70 Ga0105247_10079950 3300009101 Bacteria 2058
71 Ga0105243_10666861 3300009148 Bacteria 1010
72 Ga0105243_10763729 3300009148 Unclassified 949
73 Ga0105241_10769970 3300009174 Unclassified 884
74 Ga0105242_10011977 3300009176 Bacteria 6676
75 Ga0105242_10054023 3300009176 Bacteria 3282
76 Ga0105242_10134585 3300009176 Bacteria 2138
77 Ga0105248_10173617 3300009177 Bacteria 2429
78 Ga0105248_10944893 3300009177 Bacteria 974
79 Ga0105237_10370365 3300009545 Bacteria 1437
80 Ga0105237_10482718 3300009545 Bacteria 1245
81 Ga0157370_10078162 3300013104 Bacteria 3116
82 Ga0157370_10176631 3300013104 Bacteria 1985
83 Ga0157369_10326854 3300013105 Bacteria 1594
84 Ga0157369_11262811 3300013105 Bacteria 753
85 Ga0157374_10404944 3300013296 Bacteria 1361
86 Ga0163162_11407621 3300013306 Bacteria 793
87 Ga0157375_10161667 3300013308 Unclassified 2381
88 Ga0163163_10038634 3300014325 Bacteria 4654
89 Ga0157379_10503359 3300014968 Bacteria 1123
90 Ga0197907_10773591 3300020069 Bacteria 2545
91 Ga0206356_10755016 3300020070 Bacteria 1489
92 Ga0206349_1762893 3300020075 Bacteria 1040
93 Ga0206355_1169434 3300020076 Bacteria 1018
94 Ga0206351_10179607 3300020077 Bacteria 1080
95 Ga0206350_10460412 3300020080 Bacteria 1026
96 Ga0206350_10689074 3300020080 Bacteria 890
97 Ga0206353_10590962 3300020082 Bacteria 1178
98 Ga0154015_1449663 3300020610 Bacteria 1354
99 Ga0213875_10002413 3300021388 Bacteria 11231
100 Ga0224712_10018872 3300022467 Bacteria 2314
101 Ga0224712_10134903 3300022467 Bacteria 1081
102 Ga0207682_10108667 3300025893 Bacteria 1219
103 Ga0207705_10044622 3300025909 Bacteria 3186
104 Ga0207693_10256646 3300025915 Bacteria 1371
105 Ga0207693_10550429 3300025915 Bacteria 900
106 Ga0207663_10053039 3300025916 Bacteria 2532
107 Ga0207660_10015994 3300025917 Bacteria 4959
108 Ga0207657_10050198 3300025919 Bacteria 3631
109 Ga0207652_10205674 3300025921 Bacteria 1772
110 Ga0207646_10474238 3300025922 Bacteria 1128
111 Ga0207687_10321582 3300025927 Bacteria 1252
112 Ga0207700_10399502 3300025928 Bacteria 1204
113 Ga0207664_10161768 3300025929 Bacteria 1910
114 Ga0207664_10435505 3300025929 Bacteria 1169
115 Ga0207664_10493113 3300025929 Bacteria 1096
116 Ga0207686_10002661 3300025934 Bacteria 9688
117 Ga0207686_10030123 3300025934 Bacteria 3209
118 Ga0207686_10165323 3300025934 Bacteria 1555
119 Ga0207709_10807813 3300025935 Unclassified 757
120 Ga0207669_10220332 3300025937 Bacteria 1392
121 Ga0207711_10152881 3300025941 Bacteria 2083
122 Ga0207711_10968386 3300025941 Unclassified 790
123 Ga0207661_10026259 3300025944 Bacteria 4435
124 Ga0207661_11255123 3300025944 Bacteria 681
125 Ga0207677_10134965 3300026023 Bacteria 1880
126 Ga0207703_10685070 3300026035 Bacteria 974
127 Ga0207678_10294903 3300026067 Bacteria 1393
128 Ga0207641_10216646 3300026088 Bacteria 1773
129 Ga0207641_10382348 3300026088 Bacteria 1348
130 Ga0207676_10606068 3300026095 Bacteria 1052
131 Ga0207674_10011043 3300026116 Bacteria 10157
132 Ga0207674_10022354 3300026116 Bacteria 6791
133 Ga0207428_10000002 3300027907 Bacteria 854851
134 Ga0268265_10246727 3300028380 Bacteria 1579
135 Ga0268264_10005314 3300028381 Bacteria 10906
136 Ga0268264_10544033 3300028381 Bacteria 1138
137 Ga0268264_10846069 3300028381 Bacteria 916
138 Ga0265334_10013996 3300028573 Bacteria 3349
139 Ga0265334_10118820 3300028573 Bacteria 946
140 Ga0265318_10044374 3300028577 Bacteria 1682
141 Ga0265323_10000955 3300028653 Bacteria 15128
142 Ga0265323_10063305 3300028653 Bacteria 1281
143 Ga0265322_10007986 3300028654 Bacteria 3087
144 Ga0265322_10013322 3300028654 Bacteria 2380
145 Ga0265338_10001926 3300028800 Bacteria 32378
146 Ga0265338_10004045 3300028800 Bacteria 20114
147 Ga0265338_10017091 3300028800 Bacteria 7841
148 Ga0265338_10274821 3300028800 Bacteria 1233
149 Ga0265324_10001640 3300029957 Bacteria 12383
150 Ga0265324_10191942 3300029957 Bacteria 694
151 Ga0265330_10009377 3300031235 Bacteria 4654
152 Ga0265320_10023234 3300031240 Bacteria 3303
153 Ga0265325_10002210 3300031241 Bacteria 13209
154 Ga0265331_10080695 3300031250 Bacteria 1512
155 Ga0265316_10012954 3300031344 Bacteria 7443
156 Ga0265316_10048217 3300031344 Bacteria 3365
157 Ga0307513_10637492 3300031456 Bacteria 773
158 Ga0265313_10004359 3300031595 Bacteria 10921
159 Ga0265313_10017391 3300031595 Bacteria 4089
160 Ga0310107_117756 3300031615 Bacteria 869
161 Ga0310111_115468 3300031667 Bacteria 958
162 Ga0310114_104921 3300031678 Bacteria 1365
163 Ga0265314_10003370 3300031711 Bacteria 15492
164 Ga0265314_10155067 3300031711 Unclassified 1400
165 Ga0265342_10004344 3300031712 Bacteria 11215
166 Ga0265342_10228075 3300031712 Bacteria 1001
167 Ga0265342_10375330 3300031712 Unclassified 737
168 Ga0316045_112428 3300031815 Bacteria 944
169 Ga0307416_100765237 3300032002 Bacteria 1059
170 Ga0316212_1001423 3300033547 Bacteria 3255
171 Ga0373957_0129124 3300035120 Bacteria 1028
172 Ga0373937_0144187 3300036401 Bacteria 2229
173 Ga0373937_1397931 3300036401 Unclassified 648
174 Ga0310112_009992 3300036458 Bacteria 1357
175 Ga0395905_0000010 3300037471 Bacteria 460729
176 Ga0436364_0805657 3300037853 Bacteria 63201
177 Ga0436363_0454649 3300039450 Bacteria 622
178 Ga0439445_0012644 3300042004 Bacteria 2032
179 Ga0439444_0067680 3300042437 Bacteria 758
180 Ga0466963_0095269 3300044694 Bacteria 2031
181 Ga0466971_0018942 3300044719 Bacteria 3053
182 Ga0466968_0178509 3300044735 Bacteria 987
183 Ga0466958_0128274 3300045836 Bacteria 1591
184 Ga0466967_0046597 3300045976 Bacteria 3776
185 Ga0466967_0752788 3300045976 Bacteria 966
186 Ga0495641_0184905 3300046461 Bacteria 933
187 Ga0495686_0415561 3300047472 Bacteria 720
188 Ga0496108_0023945 3300048911 Bacteria 5026
189 Ga0496108_0281400 3300048911 Bacteria 1448
190 Ga0496109_0305606 3300048912 Bacteria 1500
191 Ga0496109_0308388 3300048912 Bacteria 1493
192 Ga0496110_0526623 3300048913 Bacteria 1075
193 Ga0496112_0141689 3300048915 Bacteria 2373
194 Ga0496115_0029629 3300048918 Bacteria 4300
195 Ga0496126_0380612 3300048929 Bacteria 1149
196 Ga0501032_0526196 3300049569 Bacteria 755
197 Ga0501036_0100772 3300049572 Bacteria 2443
198 Ga0501040_0202653 3300049576 Bacteria 1409
199 Ga0501041_0225056 3300049577 Bacteria 1177
200 Ga0501046_0172080 3300049580 Bacteria 1624
201 Ga0501073_0327921 3300049589 Bacteria 1057
202 Ga0501075_0095079 3300049591 Bacteria 2261
203 Ga0501076_0030283 3300049592 Bacteria 4215
204 Ga0501081_0046920 3300049743 Bacteria 2971
205 Ga0501081_0283239 3300049743 Bacteria 1214
206 Ga0501083_0002926 3300049744 Bacteria 11824
207 Ga0501045_0034683 3300049824 Bacteria 3664
208 Ga0501045_0224958 3300049824 Bacteria 1397
209 nmdc:mga03683_77054_c1 3300050489 Bacteria 1434
210 nmdc:mga00v17_1994_c1 3300050491 Bacteria 10531
211 nmdc:mga0yw44_2600_c1 3300050492 Bacteria 7755
212 nmdc:mga0k408_355623_c1 3300050493 Bacteria 873
213 nmdc:mga06z11_134005_c1 3300050494 Bacteria 1394
214 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
215 nmdc:mga0n895_57_c1 3300050512 Bacteria 65730
216 nmdc:mga0rr50_405824_c1 3300050513 Bacteria 1151
217 nmdc:mga0rr50_5_c1 3300050513 Bacteria 327169
218 nmdc:mga08x19_136214_c1 3300050514 Bacteria 1656
219 nmdc:mga08x19_1472_c1 3300050514 Bacteria 14582
220 Ga0495655_0078802 3300053083 Bacteria 937
221 Ga0501084_0113473 3300054114 Bacteria 2278
222 Ga0587083_0048959 3300059505 Bacteria 914
223 Ga0587111_0043433 3300060346 Bacteria 967
224 Ga0530510_0079773 3300061734 Bacteria 2381
225 2788434911 2786546940 Bacteria 6396474
226 Ga0496119_0070599
227 Ga0058863_11867056
228 Ga0070658_10043857
229 Ga0070683_100125187
230 Ga0070683_100307267
231 Ga0070670_100459863
232 Ga0068869_100730886
233 Ga0070680_100204698
234 Ga0070689_100736281
235 Ga0070692_10390220
236 Ga0070675_100233898
237 Ga0070674_100437630
238 Ga0070714_100478988
239 Ga0070714_100684918
240 Ga0070713_100318630
241 Ga0070713_100392619
242 Ga0070705_100068046
243 Ga0070663_100083831
244 Ga0070678_100283857
245 Ga0070662_100097505
246 Ga0070681_10176340
247 Ga0070681_11132998
248 Ga0070685_10690708
249 Ga0070684_100193739
250 Ga0068853_100834925
251 Ga0070665_100045239
252 Ga0070665_100086364
253 Ga0068857_100006291
254 Ga0068857_100382784
255 Ga0068856_100637152
256 Ga0068859_100010724
257 Ga0068859_100107818
258 Ga0068864_100166931
259 Ga0068863_100279006
260 Ga0068863_100416796
261 Ga0068858_100962482
262 Ga0068858_101073543
263 Ga0068860_100011013
264 Ga0068862_100341166
265 Ga0081455_10118459
266 Ga0075365_10003161
267 Ga0075368_10006752
268 Ga0075364_10000982
269 Ga0075432_10114516
270 Ga0070712_100256859
271 Ga0075362_10006724
272 Ga0075367_10106292
273 Ga0075367_10241367
274 Ga0075369_10040318
275 Ga0075366_10153859
276 Ga0075370_10074772
277 Ga0068871_100154580
278 Ga0075428_100000003
279 Ga0075433_10082879
280 Ga0075434_100005397
281 Ga0075434_100187410
282 Ga0075434_100508703
283 Ga0075436_100018756
284 Ga0097620_100010724
285 Ga0097620_100107815
286 Ga0075435_100000498
287 Ga0075435_100007372
288 Ga0075435_100131062
289 Ga0075435_100516400
290 Ga0105240_10708534
291 Ga0111539_10000001
292 Ga0105245_10089635
293 Ga0105245_10425516
294 Ga0105245_10982583
295 Ga0105247_10079950
296 Ga0105243_10666861
297 Ga0105243_10763729
298 Ga0105241_10769970
299 Ga0105242_10011977
300 Ga0105242_10054023
301 Ga0105242_10134585
302 Ga0105248_10173617
303 Ga0105248_10944893
304 Ga0105237_10370365
305 Ga0105237_10482718
306 Ga0157370_10078162
307 Ga0157370_10176631
308 Ga0157369_10326854
309 Ga0157369_11262811
310 Ga0157374_10404944
311 Ga0163162_11407621
312 Ga0157375_10161667
313 Ga0163163_10038634
314 Ga0157379_10503359
315 Ga0197907_10773591
316 Ga0206356_10755016
317 Ga0206349_1762893
318 Ga0206355_1169434
319 Ga0206351_10179607
320 Ga0206350_10460412
321 Ga0206350_10689074
322 Ga0206353_10590962
323 Ga0154015_1449663
324 Ga0213875_10002413
325 Ga0224712_10018872
326 Ga0224712_10134903
327 Ga0207682_10108667
328 Ga0207705_10044622
329 Ga0207693_10256646
330 Ga0207693_10550429
331 Ga0207663_10053039
332 Ga0207660_10015994
333 Ga0207657_10050198
334 Ga0207652_10205674
335 Ga0207646_10474238
336 Ga0207687_10321582
337 Ga0207700_10399502
338 Ga0207664_10161768
339 Ga0207664_10435505
340 Ga0207664_10493113
341 Ga0207686_10002661
342 Ga0207686_10030123
343 Ga0207686_10165323
344 Ga0207709_10807813
345 Ga0207669_10220332
346 Ga0207711_10152881
347 Ga0207711_10968386
348 Ga0207661_10026259
349 Ga0207661_11255123
350 Ga0207677_10134965
351 Ga0207703_10685070
352 Ga0207678_10294903
353 Ga0207641_10216646
354 Ga0207641_10382348
355 Ga0207676_10606068
356 Ga0207674_10011043
357 Ga0207674_10022354
358 Ga0207428_10000002
359 Ga0268265_10246727
360 Ga0268264_10005314
361 Ga0268264_10544033
362 Ga0268264_10846069
363 Ga0265334_10013996
364 Ga0265334_10118820
365 Ga0265318_10044374
366 Ga0265323_10000955
367 Ga0265323_10063305
368 Ga0265322_10007986
369 Ga0265322_10013322
370 Ga0265338_10001926
371 Ga0265338_10004045
372 Ga0265338_10017091
373 Ga0265338_10274821
374 Ga0265324_10001640
375 Ga0265324_10191942
376 Ga0265330_10009377
377 Ga0265320_10023234
378 Ga0265325_10002210
379 Ga0265331_10080695
380 Ga0265316_10012954
381 Ga0265316_10048217
382 Ga0307513_10637492
383 Ga0265313_10004359
384 Ga0265313_10017391
385 Ga0310107_117756
386 Ga0310111_115468
387 Ga0310114_104921
388 Ga0265314_10003370
389 Ga0265314_10155067
390 Ga0265342_10004344
391 Ga0265342_10228075
392 Ga0265342_10375330
393 Ga0316045_112428
394 Ga0307416_100765237
395 Ga0316212_1001423
396 Ga0373957_0129124
397 Ga0373937_0144187
398 Ga0373937_1397931
399 Ga0310112_009992
400 Ga0395905_0000010
401 Ga0436364_0805657
402 Ga0436363_0454649
403 Ga0439445_0012644
404 Ga0439444_0067680
405 Ga0466963_0095269
406 Ga0466971_0018942
407 Ga0466968_0178509
408 Ga0466958_0128274
409 Ga0466967_0046597
410 Ga0466967_0752788
411 Ga0495641_0184905
412 Ga0495686_0415561
413 Ga0496108_0023945
414 Ga0496108_0281400
415 Ga0496109_0305606
416 Ga0496109_0308388
417 Ga0496110_0526623
418 Ga0496112_0141689
419 Ga0496115_0029629
420 Ga0496126_0380612
421 Ga0501032_0526196
422 Ga0501036_0100772
423 Ga0501040_0202653
424 Ga0501041_0225056
425 Ga0501046_0172080
426 Ga0501073_0327921
427 Ga0501075_0095079
428 Ga0501076_0030283
429 Ga0501081_0046920
430 Ga0501081_0283239
431 Ga0501083_0002926
432 Ga0501045_0034683
433 Ga0501045_0224958
434 nmdc:mga03683_77054_c1
435 nmdc:mga00v17_1994_c1
436 nmdc:mga0yw44_2600_c1
437 nmdc:mga0k408_355623_c1
438 nmdc:mga06z11_134005_c1
439 nmdc:mga08y16_3_c1
440 nmdc:mga0n895_57_c1
441 nmdc:mga0rr50_405824_c1
442 nmdc:mga0rr50_5_c1
443 nmdc:mga08x19_136214_c1
444 nmdc:mga08x19_1472_c1
445 Ga0495655_0078802
446 Ga0501084_0113473
447 Ga0587083_0048959
448 Ga0587111_0043433
449 Ga0530510_0079773
450 2788434911

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00677

Lum_binding

Lumazine binding domain

112

219

0.96

PF00677

Lum_binding

Lumazine binding domain

3

99

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fxu-assembly1.cif.gz_A crystallographic structure of trimeric riboflavin synthase from brucella abortus 0.9728 1 199
1pkv-assembly1.cif.gz_B the n-terminal domain of riboflavin synthase in complex with riboflavin 0.9722 102 187
4g6i-assembly1.cif.gz_B crystallographic structure of trimeric riboflavin synthase from brucella abortus in complex with roseoflavin 0.9708 1 199
4fxu-assembly1.cif.gz_A crystallographic structure of trimeric riboflavin synthase from brucella abortus 0.963 1 199
1i8d-assembly1.cif.gz_A crystal structure of riboflavin synthase 0.9627 1 201
ID Description Score Start End Superfamily
af_B7FAH8_195_301_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9798 106 201 2.40.30.20
af_P9WK35_1_88_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9798 1 92 2.40.30.20
af_P9WK35_1_88_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9688 1 92 2.40.30.20
af_Q2FXG0_101_204_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9657 106 202 2.40.30.20
af_A0A1D8PP67_110_218_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9636 106 201 2.40.30.20
ID Description Score Start End GO Terms
AF-D9UC65-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9935 2 198 GO:0004746
GO:0009231
AF-A0A7W3RB48-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9927 2 199 GO:0004746
GO:0009231
AF-A0A010YMA7-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9926 2 197 GO:0004746
GO:0009231
AF-A0A1F4QV07-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9926 1 198 GO:0004746
GO:0009231
AF-A0A2S9PNR8-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9919 1 201 GO:0004746
GO:0009231

Map