F337264

General Info

Members Datasets Scaffolds Average Seq Length
224 184 214 398

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842694124|2842696855
Length 431
Sequence ARLDDVAWLTAPPLGEVLAALDRDGEEARIAGGSVRDAWLGLPRGDVDIATTALPAETMRRARAAGWKAVPTGLDHGTVTVVAKGRPFEVTTLRRDVGTDGRRAVVAFTRDWAEDAQRRDLTMNGLYLDRSGRIHDSVGGLDDLLAGRVRFIGDPRERIREDYLRILRFFRFHARFGRGPIDAAGLAAAIAERAGLATLSRERVRAELLKLLVAPGAGETLRAMAETGLLGLLLGGVPRLVRLKRLAELDGEGDAILRLAGLAHVVAEDGERLQRRLRLTNAEAKRLAAIGDARPSLTPEIGEAAAKVALYRLGRRAFEDRARLAWADVGAASNDAAWTALIALPERWSVPKPPFAAGDLIARGVAPGPALGHALRAVEEAWIGAGFPVGKAAEALMDAAARWHAGGPSGSPASPWSGFTAPSISDVKLDK

Samples

Sample ID Description Type Environment
1 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
2 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
3 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
4 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
5 2842694124 Methylopila sp. R-72369 Isolate Unclassified
6 2909042592 Labrys sp. LIt4 Isolate Nodule
7 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
8 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
9 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
10 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
11 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
86 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
88 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
89 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
90 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
95 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
96 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
99 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
100 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
106 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
109 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
110 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
111 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
112 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
113 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
114 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
117 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
118 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
121 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
122 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
123 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
130 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
131 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
132 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
135 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
158 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
179 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
180 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
184 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.54
Metatranscriptomes 0
Isolates 4.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.27
Nodule 1.34
Rhizoplane 1.79
Rhizosphere 79.02
Stem 0
Stem Tuber 0
Unclassified 7.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000984 3300003187 Bacteria 21612
2 JGI25160J50197_1004159 3300003354 Bacteria 6299
3 Ga0070666_10127353 3300005335 Bacteria 1768
4 Ga0070680_100081104 3300005336 Bacteria 2677
5 Ga0070680_100100882 3300005336 Bacteria 2396
6 Ga0070682_100089857 3300005337 Bacteria 2007
7 Ga0070659_100110842 3300005366 Bacteria 2215
8 Ga0070709_10000738 3300005434 Bacteria 18492
9 Ga0070714_100004606 3300005435 Bacteria 10396
10 Ga0070713_100017576 3300005436 Bacteria 5412
11 Ga0070713_100026156 3300005436 Bacteria 4576
12 Ga0070713_100031885 3300005436 Bacteria 4202
13 Ga0070710_10021794 3300005437 Bacteria 3344
14 Ga0070711_100069924 3300005439 Bacteria 2470
15 Ga0070705_100027360 3300005440 Bacteria 3113
16 Ga0070679_100055086 3300005530 Bacteria 3960
17 Ga0070679_100222214 3300005530 Bacteria 1850
18 Ga0070697_100000639 3300005536 Bacteria 26542
19 Ga0068853_100001683 3300005539 Bacteria 16187
20 Ga0070695_100005063 3300005545 Bacteria 7764
21 Ga0070696_100009200 3300005546 Bacteria 6612
22 Ga0070693_100012571 3300005547 Bacteria 4286
23 Ga0070704_100007997 3300005549 Bacteria 6315
24 Ga0068855_100033118 3300005563 Bacteria 6169
25 Ga0068854_100081735 3300005578 Bacteria 2387
26 Ga0081455_10013815 3300005937 Bacteria 7946
27 Ga0070717_10000485 3300006028 Bacteria 25249
28 Ga0075365_10018075 3300006038 Bacteria 4327
29 Ga0075365_10062981 3300006038 Bacteria 2482
30 Ga0075364_10039468 3300006051 Bacteria 3060
31 Ga0070715_10001137 3300006163 Bacteria 7597
32 Ga0070712_100019724 3300006175 Bacteria 4402
33 Ga0075362_10022945 3300006177 Bacteria 2634
34 Ga0075367_10004655 3300006178 Bacteria 6727
35 Ga0075370_10042196 3300006353 Bacteria 2577
36 Ga0075428_100005241 3300006844 Bacteria 14417
37 Ga0075428_100168718 3300006844 Bacteria 2374
38 Ga0075430_100010396 3300006846 Bacteria 7882
39 Ga0075430_100032927 3300006846 Bacteria 4399
40 Ga0075431_100000105 3300006847 Bacteria 53256
41 Ga0075434_100031153 3300006871 Bacteria 5256
42 Ga0075429_100005372 3300006880 Bacteria 11021
43 Ga0075436_100091542 3300006914 Bacteria 2114
44 Ga0075435_100075222 3300007076 Bacteria 2765
45 Ga0105240_10105287 3300009093 Bacteria 3425
46 Ga0111539_10000792 3300009094 Bacteria 41176
47 Ga0111539_10108856 3300009094 Bacteria 3252
48 Ga0114129_10003927 3300009147 Bacteria 20989
49 Ga0114129_10090927 3300009147 Bacteria 4230
50 Ga0114129_10527465 3300009147 Bacteria 1539
51 Ga0105243_10184939 3300009148 Bacteria 1815
52 Ga0105241_10029838 3300009174 Bacteria 4071
53 Ga0105238_10078003 3300009551 Bacteria 3303
54 Ga0105249_10001791 3300009553 Bacteria 18701
55 Ga0157373_10079829 3300013100 Bacteria 2307
56 Ga0157370_10021721 3300013104 Bacteria 6393
57 Ga0171462_1006 3300013250 Bacteria 432986
58 Ga0157374_10225290 3300013296 Bacteria 1841
59 Ga0157372_10109154 3300013307 Bacteria 3168
60 Ga0213876_10001467 3300021384 Bacteria 14688
61 Ga0213876_10017275 3300021384 Bacteria 3809
62 Ga0213876_10031247 3300021384 Bacteria 2810
63 Ga0209130_1001260 3300025284 Bacteria 17661
64 Ga0209025_1001732 3300025294 Bacteria 26312
65 Ga0209025_1055912 3300025294 Bacteria 1522
66 Ga0209758_1002257 3300025297 Bacteria 19987
67 Ga0207426_1000088 3300025302 Bacteria 287526
68 Ga0207692_10000282 3300025898 Bacteria 17493
69 Ga0207688_10035658 3300025901 Bacteria 2756
70 Ga0207654_10094722 3300025911 Bacteria 1828
71 Ga0207707_10004788 3300025912 Bacteria 11871
72 Ga0207693_10016176 3300025915 Bacteria 5966
73 Ga0207693_10021249 3300025915 Bacteria 5158
74 Ga0207663_10001206 3300025916 Bacteria 11940
75 Ga0207660_10036273 3300025917 Bacteria 3427
76 Ga0207652_10110649 3300025921 Bacteria 2436
77 Ga0207687_10046180 3300025927 Bacteria 3014
78 Ga0207700_10003347 3300025928 Bacteria 9298
79 Ga0207700_10009935 3300025928 Bacteria 5975
80 Ga0207700_10042113 3300025928 Bacteria 3346
81 Ga0207664_10012974 3300025929 Bacteria 5970
82 Ga0207690_10062942 3300025932 Unclassified 2528
83 Ga0207665_10013741 3300025939 Bacteria 5325
84 Ga0207667_10146038 3300025949 Bacteria 2435
85 Ga0207640_10092657 3300025981 Bacteria 2097
86 Ga0207428_10006625 3300027907 Bacteria 10652
87 Ga0307515_10231552 3300028794 Bacteria 1639
88 Ga0265325_10003656 3300031241 Bacteria 9969
89 Ga0265339_10000158 3300031249 Bacteria 56155
90 Ga0265313_10000426 3300031595 Bacteria 45023
91 Ga0307415_100110110 3300032126 Bacteria 2042
92 Ga0373944_0001561 3300035089 Bacteria 5790
93 Ga0373936_0031859 3300035113 Bacteria 2083
94 Ga0373945_0018991 3300035116 Bacteria 2343
95 Ga0373943_0004833 3300035170 Bacteria 6091
96 Ga0373946_0003432 3300035171 Bacteria 5621
97 Ga0373924_0042660 3300035410 Bacteria 1862
98 Ga0373927_0005265 3300035695 Bacteria 8948
99 Ga0373927_0007600 3300035695 Bacteria 7339
100 Ga0373947_0000581 3300035725 Bacteria 21444
101 Ga0373947_0022094 3300035725 Bacteria 3687
102 Ga0373925_0006328 3300037068 Bacteria 8722
103 Ga0373925_0048408 3300037068 Bacteria 3167
104 Ga0400483_010094 3300039062 Bacteria 15639
105 Ga0436365_0415116 3300039437 Bacteria 5443
106 Ga0436365_0768275 3300039437 Bacteria 19205
107 Ga0436365_0835364 3300039437 Bacteria 3729
108 Ga0436365_0939513 3300039437 Bacteria 16537
109 Ga0436365_1413221 3300039437 Bacteria 3028
110 Ga0436360_0187881 3300039438 Bacteria 12306
111 Ga0436361_0068100 3300039447 Bacteria 4736
112 Ga0436362_0637566 3300039453 Bacteria 6113
113 Ga0439464_0026293 3300042439 Bacteria 1614
114 Ga0495627_001066 3300046453 Bacteria 18131
115 Ga0495629_0019775 3300046459 Bacteria 4806
116 Ga0495638_0000028 3300046460 Bacteria 330252
117 Ga0495653_0009071 3300046463 Bacteria 8135
118 Ga0495580_0017623 3300046472 Bacteria 5335
119 Ga0495639_0058795 3300046475 Bacteria 1759
120 Ga0495662_0001012 3300046476 Bacteria 13797
121 Ga0495664_0000817 3300046477 Bacteria 15943
122 Ga0495585_0002339 3300046492 Viruses 13628
123 Ga0495607_0000001 3300046501 Bacteria 1245328
124 Ga0495606_0005238 3300046507 Viruses 12520
125 Ga0495610_0000016 3300046512 Bacteria 373959
126 Ga0495610_0007845 3300046512 Bacteria 7022
127 Ga0495610_0011285 3300046512 Bacteria 5474
128 Ga0495616_0030632 3300046513 Bacteria 2825
129 Ga0495618_0000473 3300046514 Bacteria 28654
130 Ga0495620_0017609 3300046515 Bacteria 3555
131 Ga0495630_0007807 3300046517 Bacteria 7660
132 Ga0495630_0010138 3300046517 Bacteria 6791
133 Ga0495631_0001291 3300046518 Viruses 15387
134 Ga0495632_0021541 3300046519 Bacteria 3471
135 Ga0495643_0003046 3300046522 Viruses 12600
136 Ga0495643_0010738 3300046522 Bacteria 5624
137 Ga0495652_0028548 3300046529 Bacteria 4908
138 Ga0495665_0008334 3300046531 Bacteria 5620
139 Ga0495665_0029568 3300046531 Bacteria 2935
140 Ga0495640_0002833 3300046533 Bacteria 13941
141 Ga0495586_0015239 3300046535 Bacteria 4088
142 Ga0495597_0001709 3300046542 Bacteria 15215
143 Ga0495645_0049881 3300046543 Bacteria 3047
144 Ga0495633_0001522 3300046558 Viruses 17859
145 Ga0495633_0010781 3300046558 Bacteria 4970
146 Ga0495634_0008539 3300046642 Bacteria 7614
147 Ga0495634_0010351 3300046642 Bacteria 6834
148 Ga0495625_0000104 3300046660 Bacteria 133234
149 Ga0495635_0009130 3300046663 Bacteria 6923
150 Ga0495661_0000379 3300046665 Bacteria 47773
151 Ga0495599_0049804 3300046678 Bacteria 2626
152 Ga0495646_0037824 3300046680 Bacteria 2983
153 Ga0495624_0013382 3300046690 Bacteria 5595
154 Ga0495670_0000001 3300046691 Bacteria 1556780
155 Ga0495649_0009095 3300046694 Bacteria 5928
156 Ga0495660_0000494 3300046810 Bacteria 32582
157 Ga0495581_0040552 3300047315 Bacteria 2694
158 Ga0495674_0001683 3300047319 Bacteria 21746
159 Ga0495674_0065172 3300047319 Bacteria 3165
160 Ga0495672_0000008 3300047320 Bacteria 568137
161 Ga0495681_0018006 3300047470 Bacteria 3906
162 Ga0495684_0006910 3300047471 Bacteria 8809
163 Ga0495684_0008291 3300047471 Bacteria 8046
164 Ga0495684_0057330 3300047471 Bacteria 2968
165 Ga0495686_0001099 3300047472 Bacteria 32127
166 Ga0495686_0008458 3300047472 Viruses 7548
167 Ga0495686_0027325 3300047472 Bacteria 3727
168 Ga0496104_0073885 3300048907 Bacteria 3244
169 Ga0496107_0039820 3300048910 Bacteria 3372
170 Ga0496108_0009284 3300048911 Bacteria 7960
171 Ga0496110_0133186 3300048913 Bacteria 2245
172 Ga0496119_0004791 3300048922 Bacteria 13278
173 Ga0496122_0004715 3300048925 Bacteria 16745
174 Ga0496123_0000896 3300048926 Bacteria 47149
175 Ga0501036_0017925 3300049572 Bacteria 5928
176 Ga0501038_0008341 3300049574 Bacteria 9534
177 Ga0501038_0119042 3300049574 Bacteria 2180
178 Ga0501039_0071051 3300049575 Bacteria 2704
179 Ga0501041_0022802 3300049577 Bacteria 3751
180 Ga0501042_0030269 3300049578 Bacteria 3822
181 Ga0501046_0000011 3300049580 Bacteria 326457
182 Ga0501047_0025783 3300049581 Bacteria 5653
183 Ga0501048_0002903 3300049582 Bacteria 13083
184 Ga0501067_0022381 3300049583 Bacteria 3498
185 Ga0501071_0050701 3300049587 Bacteria 2990
186 Ga0501074_0058915 3300049590 Bacteria 2767
187 Ga0501079_0027787 3300049741 Bacteria 4339
188 nmdc:mga00v17_48407_c1 3300050491 Bacteria 2577
189 nmdc:mga0yw44_1178_c1 3300050492 Bacteria 10193
190 nmdc:mga0yw44_45306_c1 3300050492 Bacteria 2636
191 nmdc:mga06z11_5860_c1 3300050494 Bacteria 4962
192 nmdc:mga07m45_13914_c1 3300050496 Bacteria 3895
193 nmdc:mga05p37_140_c1 3300050507 Bacteria 67571
194 nmdc:mga09592_1649_c1 3300050508 Bacteria 17953
195 nmdc:mga0qj67_226392_c1 3300050509 Bacteria 1518
196 nmdc:mga0qj67_24966_c1 3300050509 Bacteria 4612
197 nmdc:mga06r32_671_c1 3300050510 Bacteria 29849
198 nmdc:mga08y16_104_c1 3300050511 Bacteria 70280
199 nmdc:mga0n895_70607_c1 3300050512 Bacteria 3461
200 nmdc:mga0rr50_53320_c1 3300050513 Bacteria 3008
201 nmdc:mga08x19_6_c1 3300050514 Bacteria 405679
202 Ga0495601_0000860 3300053077 Bacteria 16549
203 Ga0495612_0000075 3300053078 Bacteria 45362
204 Ga0495619_0003526 3300053085 Bacteria 10092
205 Ga0495619_0112163 3300053085 Bacteria 1864
206 Ga0500556_0000290 3300053104 Bacteria 39103
207 Ga0500568_0019093 3300053139 Bacteria 2987
208 Ga0500622_0040829 3300053156 Bacteria 2415
209 Ga0500636_0006397 3300053177 Bacteria 6760
210 Ga0500645_008991 3300053730 Bacteria 3374
211 Ga0501084_0363457 3300054114 Bacteria 1223
212 Ga0501082_0025338 3300060353 Bacteria 5111
213 Ga0530510_0031673 3300061734 Bacteria 3803
214 Ga0530510_0121353 3300061734 Bacteria 1919

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006871 Ga0075434_100031153 Ga0075434_1000311534 322
2 3300007076 Ga0075435_100075222 Ga0075435_1000752223 322
3 3300050513 nmdc:mga0rr50_53320_c1 nmdc:mga0rr50_53320_c1_1612_2823 322
4 3300035113 Ga0373936_0031859 Ga0373936_0031859_799_1986 336
5 3300035170 Ga0373943_0004833 Ga0373943_0004833_2382_3569 336
6 3300047315 Ga0495581_0040552 Ga0495581_0040552_906_2093 336
7 3300046460 Ga0495638_0000028 Ga0495638_0000028_55898_57064 342
8 3300046492 Ga0495585_0002339 Ga0495585_0002339_1557_2723 342
9 3300046501 Ga0495607_0000001 Ga0495607_0000001_694445_695611 342
10 3300046507 Ga0495606_0005238 Ga0495606_0005238_5494_6660 342
11 3300046512 Ga0495610_0007845 Ga0495610_0007845_4171_5337 342
12 3300046513 Ga0495616_0030632 Ga0495616_0030632_300_1466 342
13 3300046515 Ga0495620_0017609 Ga0495620_0017609_1174_2340 342
14 3300046518 Ga0495631_0001291 Ga0495631_0001291_6274_7440 342
15 3300046519 Ga0495632_0021541 Ga0495632_0021541_2250_3416 342
16 3300046522 Ga0495643_0003046 Ga0495643_0003046_4566_5732 342
17 3300046542 Ga0495597_0001709 Ga0495597_0001709_617_1783 342
18 3300046558 Ga0495633_0001522 Ga0495633_0001522_5767_6933 342
19 3300046691 Ga0495670_0000001 Ga0495670_0000001_1050129_1051295 342
20 3300046694 Ga0495649_0009095 Ga0495649_0009095_2175_3341 342
21 3300047320 Ga0495672_0000008 Ga0495672_0000008_339795_340961 342
22 3300047470 Ga0495681_0018006 Ga0495681_0018006_1112_2278 342
23 3300047472 Ga0495686_0008458 Ga0495686_0008458_3388_4554 342
24 3300046453 Ga0495627_001066 Ga0495627_001066_14348_15526 346
25 3300005435 Ga0070714_100004606 Ga0070714_1000046068 354
26 3300005436 Ga0070713_100017576 Ga0070713_1000175765 354
27 3300005437 Ga0070710_10021794 Ga0070710_100217942 354
28 3300005439 Ga0070711_100069924 Ga0070711_1000699243 354
29 3300006028 Ga0070717_10000485 Ga0070717_1000048517 354
30 3300006163 Ga0070715_10001137 Ga0070715_100011373 354
31 3300025898 Ga0207692_10000282 Ga0207692_1000028211 354
32 3300025915 Ga0207693_10021249 Ga0207693_100212492 354
33 3300025916 Ga0207663_10001206 Ga0207663_1000120610 354
34 3300025928 Ga0207700_10003347 Ga0207700_100033478 354
35 3300025929 Ga0207664_10012974 Ga0207664_100129744 354
36 3300025939 Ga0207665_10013741 Ga0207665_100137415 354
37 3300048910 Ga0496107_0039820 Ga0496107_0039820_1331_2569 354
38 3300050512 nmdc:mga0n895_70607_c1 nmdc:mga0n895_70607_c1_1346_2584 354
39 3300005440 Ga0070705_100027360 Ga0070705_1000273603 356
40 3300005536 Ga0070697_100000639 Ga0070697_10000063915 356
41 3300005545 Ga0070695_100005063 Ga0070695_1000050632 356
42 3300006914 Ga0075436_100091542 Ga0075436_1000915423 356
43 3300046642 Ga0495634_0010351 Ga0495634_0010351_3706_4968 356
44 3300047471 Ga0495684_0057330 Ga0495684_0057330_1423_2685 356
45 3300035089 Ga0373944_0001561 Ga0373944_0001561_3557_4819 357
46 3300035171 Ga0373946_0003432 Ga0373946_0003432_1124_2386 357
47 3300035695 Ga0373927_0007600 Ga0373927_0007600_5516_6778 357
48 3300035725 Ga0373947_0000581 Ga0373947_0000581_6289_7551 357
49 3300037068 Ga0373925_0006328 Ga0373925_0006328_1955_3205 357
50 3300046472 Ga0495580_0017623 Ga0495580_0017623_3697_4959 357
51 3300046475 Ga0495639_0058795 Ga0495639_0058795_196_1458 357
52 3300046517 Ga0495630_0007807 Ga0495630_0007807_2927_4189 357
53 3300046531 Ga0495665_0029568 Ga0495665_0029568_525_1787 357
54 3300046690 Ga0495624_0013382 Ga0495624_0013382_3051_4313 357
55 3300047319 Ga0495674_0065172 Ga0495674_0065172_1058_2320 357
56 3300047471 Ga0495684_0006910 Ga0495684_0006910_1904_3166 357
57 3300050514 nmdc:mga08x19_6_c1 nmdc:mga08x19_6_c1_90148_91410 357
58 3300032126 Ga0307415_100110110 Ga0307415_1001101102 359
59 iso_pu_bacteria 3000017691 3000019706 359
60 3300054114 Ga0501084_0363457 Ga0501084_0363457_31_1194 360
61 3300039062 Ga0400483_010094 Ga0400483_010094_12928_14148 361
62 3300021384 Ga0213876_10031247 Ga0213876_100312473 362
63 3300039437 Ga0436365_0768275 Ga0436365_0768275_10654_11838 362
64 3300046665 Ga0495661_0000379 Ga0495661_0000379_16979_18157 362
65 3300046512 Ga0495610_0000016 Ga0495610_0000016_160132_161313 363
66 3300046522 Ga0495643_0010738 Ga0495643_0010738_2407_3588 363
67 3300046558 Ga0495633_0010781 Ga0495633_0010781_3097_4278 363
68 3300046660 Ga0495625_0000104 Ga0495625_0000104_68842_70023 363
69 3300046810 Ga0495660_0000494 Ga0495660_0000494_30523_31704 363
70 3300047472 Ga0495686_0001099 Ga0495686_0001099_2098_3279 363
71 3300047472 Ga0495686_0027325 Ga0495686_0027325_2447_3628 363
72 3300035116 Ga0373945_0018991 Ga0373945_0018991_154_1404 369
73 3300035695 Ga0373927_0005265 Ga0373927_0005265_1864_3114 369
74 3300035725 Ga0373947_0022094 Ga0373947_0022094_2059_3309 369
75 3300037068 Ga0373925_0048408 Ga0373925_0048408_1247_2497 369
76 3300046459 Ga0495629_0019775 Ga0495629_0019775_2049_3299 369
77 3300046463 Ga0495653_0009071 Ga0495653_0009071_5255_6505 369
78 3300046476 Ga0495662_0001012 Ga0495662_0001012_7031_8281 369
79 3300046477 Ga0495664_0000817 Ga0495664_0000817_1295_2545 369
80 3300046514 Ga0495618_0000473 Ga0495618_0000473_27203_28453 369
81 3300046517 Ga0495630_0010138 Ga0495630_0010138_1783_3033 369
82 3300046529 Ga0495652_0028548 Ga0495652_0028548_1682_2932 369
83 3300046531 Ga0495665_0008334 Ga0495665_0008334_1583_2833 369
84 3300046533 Ga0495640_0002833 Ga0495640_0002833_12335_13585 369
85 3300046535 Ga0495586_0015239 Ga0495586_0015239_1973_3223 369
86 3300046543 Ga0495645_0049881 Ga0495645_0049881_687_1937 369
87 3300046642 Ga0495634_0008539 Ga0495634_0008539_4510_5760 369
88 3300046663 Ga0495635_0009130 Ga0495635_0009130_5102_6352 369
89 3300046678 Ga0495599_0049804 Ga0495599_0049804_908_2158 369
90 3300046680 Ga0495646_0037824 Ga0495646_0037824_608_1858 369
91 3300047319 Ga0495674_0001683 Ga0495674_0001683_5993_7243 369
92 3300047471 Ga0495684_0008291 Ga0495684_0008291_1892_3142 369
93 3300053077 Ga0495601_0000860 Ga0495601_0000860_884_2134 369
94 3300053078 Ga0495612_0000075 Ga0495612_0000075_17208_18458 369
95 3300053085 Ga0495619_0003526 Ga0495619_0003526_1170_2420 369
96 3300039437 Ga0436365_0415116 Ga0436365_0415116_3740_5017 370
97 3300005436 Ga0070713_100026156 Ga0070713_1000261563 371
98 3300025928 Ga0207700_10009935 Ga0207700_100099355 371
99 3300025927 Ga0207687_10046180 Ga0207687_100461803 372
100 3300006844 Ga0075428_100168718 Ga0075428_1001687182 375
101 3300006846 Ga0075430_100032927 Ga0075430_1000329274 375
102 3300006175 Ga0070712_100019724 Ga0070712_1000197245 376
103 3300025915 Ga0207693_10016176 Ga0207693_100161762 376
104 3300006038 Ga0075365_10062981 Ga0075365_100629813 377
105 3300050492 nmdc:mga0yw44_45306_c1 nmdc:mga0yw44_45306_c1_986_2221 377
106 3300005335 Ga0070666_10127353 Ga0070666_101273531 378
107 3300013296 Ga0157374_10225290 Ga0157374_102252903 378
108 3300039437 Ga0436365_1413221 Ga0436365_1413221_333_1619 378
109 3300006178 Ga0075367_10004655 Ga0075367_100046557 380
110 3300006353 Ga0075370_10042196 Ga0075370_100421963 380
111 3300021384 Ga0213876_10001467 Ga0213876_100014677 380
112 3300039437 Ga0436365_0939513 Ga0436365_0939513_13606_14868 380
113 3300039453 Ga0436362_0637566 Ga0436362_0637566_4176_5438 380
114 3300048907 Ga0496104_0073885 Ga0496104_0073885_685_1953 380
115 3300048911 Ga0496108_0009284 Ga0496108_0009284_6491_7759 380
116 3300050494 nmdc:mga06z11_5860_c1 nmdc:mga06z11_5860_c1_3344_4597 380
117 3300050496 nmdc:mga07m45_13914_c1 nmdc:mga07m45_13914_c1_1939_3192 380
118 3300053085 Ga0495619_0112163 Ga0495619_0112163_330_1598 380
119 3300049574 Ga0501038_0008341 Ga0501038_0008341_1736_2989 381
120 3300049581 Ga0501047_0025783 Ga0501047_0025783_396_1649 381
121 3300061734 Ga0530510_0121353 Ga0530510_0121353_277_1509 381
122 3300025901 Ga0207688_10035658 Ga0207688_100356582 383
123 iso_pu_bacteria 2828305725 2828308328 383
124 iso_pu_bacteria 2909042592 2909043095 383
125 3300053139 Ga0500568_0019093 Ga0500568_0019093_17_1252 384
126 3300005937 Ga0081455_10013815 Ga0081455_100138156 386
127 3300039438 Ga0436360_0187881 Ga0436360_0187881_7959_9227 387
128 3300039447 Ga0436361_0068100 Ga0436361_0068100_2903_4171 387
129 3300048925 Ga0496122_0004715 Ga0496122_0004715_7808_9022 387
130 3300048926 Ga0496123_0000896 Ga0496123_0000896_25023_26237 387
131 3300048922 Ga0496119_0004791 Ga0496119_0004791_9658_10887 388
132 3300053104 Ga0500556_0000290 Ga0500556_0000290_32153_33382 388
133 3300053730 Ga0500645_008991 Ga0500645_008991_1603_2832 388
134 iso_pu_bacteria 2919450847 2919451913 388
135 iso_pu_bacteria 8001845381 8001849995 388
136 iso_pu_bacteria 2842694124 2842696855 390
137 iso_pu_bacteria 2917699015 2917704470 390
138 3300005434 Ga0070709_10000738 Ga0070709_1000073815 391
139 3300009094 Ga0111539_10108856 Ga0111539_101088562 391
140 3300009147 Ga0114129_10090927 Ga0114129_100909272 391
141 3300009147 Ga0114129_10527465 Ga0114129_105274652 391
142 3300025294 Ga0209025_1055912 Ga0209025_10559122 391
143 3300028794 Ga0307515_10231552 Ga0307515_102315522 391
144 3300049583 Ga0501067_0022381 Ga0501067_0022381_1835_3130 391
145 3300050509 nmdc:mga0qj67_226392_c1 nmdc:mga0qj67_226392_c1_51_1358 391
146 iso_pu_bacteria 2841911363 2841915836 391
147 iso_pu_bacteria 2841917233 2841921784 391
148 3300006038 Ga0075365_10018075 Ga0075365_100180754 392
149 3300006051 Ga0075364_10039468 Ga0075364_100394684 392
150 3300006177 Ga0075362_10022945 Ga0075362_100229453 392
151 3300050491 nmdc:mga00v17_48407_c1 nmdc:mga00v17_48407_c1_1223_2458 392
152 3300050492 nmdc:mga0yw44_1178_c1 nmdc:mga0yw44_1178_c1_7736_8971 392
153 3300006844 Ga0075428_100005241 Ga0075428_1000052415 393
154 3300006846 Ga0075430_100010396 Ga0075430_1000103967 393
155 3300006847 Ga0075431_100000105 Ga0075431_10000010525 393
156 3300006880 Ga0075429_100005372 Ga0075429_1000053729 393
157 3300009094 Ga0111539_10000792 Ga0111539_1000079212 393
158 3300009147 Ga0114129_10003927 Ga0114129_1000392720 393
159 3300027907 Ga0207428_10006625 Ga0207428_100066251 393
160 3300042439 Ga0439464_0026293 Ga0439464_0026293_73_1317 393
161 3300050507 nmdc:mga05p37_140_c1 nmdc:mga05p37_140_c1_11521_12765 393
162 3300050508 nmdc:mga09592_1649_c1 nmdc:mga09592_1649_c1_9132_10376 393
163 3300050509 nmdc:mga0qj67_24966_c1 nmdc:mga0qj67_24966_c1_2269_3513 393
164 3300050510 nmdc:mga06r32_671_c1 nmdc:mga06r32_671_c1_1851_3095 393
165 3300050511 nmdc:mga08y16_104_c1 nmdc:mga08y16_104_c1_38728_39972 393
166 3300005336 Ga0070680_100081104 Ga0070680_1000811043 394
167 3300005337 Ga0070682_100089857 Ga0070682_1000898571 394
168 3300005366 Ga0070659_100110842 Ga0070659_1001108423 394
169 3300005436 Ga0070713_100031885 Ga0070713_1000318856 394
170 3300005530 Ga0070679_100055086 Ga0070679_1000550863 394
171 3300005539 Ga0068853_100001683 Ga0068853_1000016833 394
172 3300005547 Ga0070693_100012571 Ga0070693_1000125715 394
173 3300005563 Ga0068855_100033118 Ga0068855_1000331182 394
174 3300005578 Ga0068854_100081735 Ga0068854_1000817352 394
175 3300009093 Ga0105240_10105287 Ga0105240_101052872 394
176 3300009174 Ga0105241_10029838 Ga0105241_100298385 394
177 3300009551 Ga0105238_10078003 Ga0105238_100780031 394
178 3300013100 Ga0157373_10079829 Ga0157373_100798293 394
179 3300013104 Ga0157370_10021721 Ga0157370_100217217 394
180 3300013250 Ga0171462_1006 Ga0171462_1006286 394
181 3300013307 Ga0157372_10109154 Ga0157372_101091544 394
182 3300025911 Ga0207654_10094722 Ga0207654_100947222 394
183 3300025912 Ga0207707_10004788 Ga0207707_100047882 394
184 3300025917 Ga0207660_10036273 Ga0207660_100362733 394
185 3300025921 Ga0207652_10110649 Ga0207652_101106494 394
186 3300025928 Ga0207700_10042113 Ga0207700_100421133 394
187 3300025932 Ga0207690_10062942 Ga0207690_100629423 394
188 3300025949 Ga0207667_10146038 Ga0207667_101460382 394
189 3300025981 Ga0207640_10092657 Ga0207640_100926572 394
190 3300031241 Ga0265325_10003656 Ga0265325_100036565 394
191 3300031249 Ga0265339_10000158 Ga0265339_1000015839 394
192 3300031595 Ga0265313_10000426 Ga0265313_1000042631 394
193 3300035410 Ga0373924_0042660 Ga0373924_0042660_324_1586 394
194 3300048913 Ga0496110_0133186 Ga0496110_0133186_279_1565 394
195 3300049580 Ga0501046_0000011 Ga0501046_0000011_160621_161880 394
196 3300005336 Ga0070680_100100882 Ga0070680_1001008822 395
197 3300005530 Ga0070679_100222214 Ga0070679_1002222142 395
198 3300005546 Ga0070696_100009200 Ga0070696_1000092007 395
199 3300005549 Ga0070704_100007997 Ga0070704_1000079975 395
200 3300009148 Ga0105243_10184939 Ga0105243_101849392 395
201 3300009553 Ga0105249_10001791 Ga0105249_1000179112 395
202 3300021384 Ga0213876_10017275 Ga0213876_100172754 395
203 3300039437 Ga0436365_0835364 Ga0436365_0835364_1676_2935 395
204 3300049572 Ga0501036_0017925 Ga0501036_0017925_3470_4747 395
205 3300049574 Ga0501038_0119042 Ga0501038_0119042_832_2109 395
206 3300049575 Ga0501039_0071051 Ga0501039_0071051_904_2181 395
207 3300049577 Ga0501041_0022802 Ga0501041_0022802_1622_2899 395
208 3300049578 Ga0501042_0030269 Ga0501042_0030269_696_1973 395
209 3300049582 Ga0501048_0002903 Ga0501048_0002903_7579_8835 395
210 3300049587 Ga0501071_0050701 Ga0501071_0050701_468_1745 395
211 3300049590 Ga0501074_0058915 Ga0501074_0058915_769_2046 395
212 3300049741 Ga0501079_0027787 Ga0501079_0027787_1385_2662 395
213 3300060353 Ga0501082_0025338 Ga0501082_0025338_3070_4347 395
214 3300061734 Ga0530510_0031673 Ga0530510_0031673_1678_2955 395
215 3300053156 Ga0500622_0040829 Ga0500622_0040829_883_2136 396
216 3300053177 Ga0500636_0006397 Ga0500636_0006397_2140_3408 396
217 iso_pu_bacteria 2821443989 2821448393 399
218 3300003354 JGI25160J50197_1004159 JGI25160J50197_10041594 400
219 3300025284 Ga0209130_1001260 Ga0209130_10012606 400
220 3300025302 Ga0207426_1000088 Ga0207426_100008863 400
221 3300046512 Ga0495610_0011285 Ga0495610_0011285_1783_2985 400
222 3300003187 JGI25151J46595_10000984 JGI25151J46595_100009847 401
223 3300025294 Ga0209025_1001732 Ga0209025_100173216 401
224 3300025297 Ga0209758_1002257 Ga0209758_100225717 401

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01743

PolyA_pol

Poly A polymerase head domain

28

150

0.94

PF12627

PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

181

240

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ou5-assembly1.cif.gz_B crystal structure of human cca-adding enzyme 0.8232 5 346
6tvz-assembly1.cif.gz_A structure of a psychrophilic cca-adding enzyme crystallized in the xtalcontroller device 0.8163 22 396
1ou5-assembly1.cif.gz_B crystal structure of human cca-adding enzyme 0.8145 5 346
6qy6-assembly1.cif.gz_A crystal structure of the cca-adding enzyme of a psychrophilic organism 0.8049 22 397
1miy-assembly1.cif.gz_A crystal structure of bacillus stearothermophilus cca-adding enzyme in complex with ctp 0.7955 10 400
ID Description Score Start End Superfamily
1miwB01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9426 18 157 3.30.460.10
af_Q2G256_1_109_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9185 46 155 3.30.460.10
af_Q4VBH2_28_179_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9155 5 148 3.30.460.10
1miyB02 Mainly Alpha;Orthogonal Bundle;Hydrophobic Seed Protein; 0.9136 158 240 1.10.110.30
af_Q2G256_1_109_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9025 46 155 3.30.460.10
ID Description Score Start End GO Terms
AF-A0A658NJI9-F1-model_v4 CCA tRNA nucleotidyltransferase 0.9789 24 102 GO:0000049
GO:0008033
GO:0016779
AF-A0A4U0YVB0-F1-model_v4 CCA tRNA nucleotidyltransferase 0.967 5 238 GO:0000049
GO:0000166
GO:0008033
GO:0016779
AF-A0A436M916-F1-model_v4 deleted 0.9636 5 133
AF-A0A7Y7IZE4-F1-model_v4 CCA tRNA nucleotidyltransferase 0.9632 17 180 GO:0000049
GO:0008033
GO:0016779
AF-A0A4U0YVB0-F1-model_v4 CCA tRNA nucleotidyltransferase 0.963 5 238 GO:0000049
GO:0000166
GO:0008033
GO:0016779

Feature Viewer

pLDDT pTM Quality
94.18 0.89 High
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Predicted Structure (AlphaFold2)

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