F336980

General Info

Members Datasets Scaffolds Average Seq Length
224 145 448 499

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0924676|Ga0436365_0924676_275350_277005
Length 551
Sequence VARGATERGRGGVRRRGARGDERRLAKFSLTEPRFELPPKSVDVVCLFDGIAHARGGREMKVLLVNPEFPETYWDFRHALKFEGKRSPFPPLGLLTVSAMLPESWERRLVDMNVRRLRDADIEWADVVFAGAMIVQKASLESVIARCKAKAKRVVLGGPYVSTTEHVPDVDHVFVGEAEATLPEFLEDLERGEPKRVYRAAERPALTSTPAPHFQLADLERYSAMSVQYSRGCPFNCEFCDIIEIYGRVPRTKTNEQMLAELDALRATGWRGLVFIVDDNFIGNKRNVKRFLPDLIEWSERRGRPFSFITEASVNLAEDDALLELMRRANFRRVFLGIETPVEESLKEAKKGQNTRRDLLESVHKIQSYGMEVMAGFIVGFDNDPEDIFDRQINFIRESAIPLAMVGLLQALPDTQLWRRLEREGRLLRESSGNNTEGSLNFIPRMDKARLVEGYKRILSTIYSPAEYYQRALDCLSHLTEGPEPRQTRILSDLTAFARVTLALGVLDSARMDFWRYMKRTLTEHRQNFAHAVTLAAMGYHFRKLTRSYVE

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
68 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
69 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
104 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
105 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
108 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
109 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
110 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
111 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
112 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
116 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
117 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
118 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
122 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
123 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
143 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
144 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.34
Nodule 0
Rhizoplane 1.79
Rhizosphere 93.3
Stem 0
Stem Tuber 0
Unclassified 1.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0924676 3300039437 Bacteria 448697
2 JGI24737J22298_10007484 3300001990 Bacteria 3685
3 JGI24735J21928_10001647 3300002067 Bacteria 7915
4 JGI25406J46586_10021535 3300003203 Bacteria 2584
5 Ga0065707_10104530 3300005295 Bacteria 2691
6 Ga0070683_100028906 3300005329 Bacteria 5014
7 Ga0070690_100013426 3300005330 Bacteria 4840
8 Ga0070670_100005074 3300005331 Bacteria 11074
9 Ga0070670_100043194 3300005331 Bacteria 3875
10 Ga0070666_10018885 3300005335 Bacteria 4442
11 Ga0070680_100050332 3300005336 Bacteria 3398
12 Ga0070687_100001012 3300005343 Bacteria 9581
13 Ga0070687_100044857 3300005343 Bacteria 2254
14 Ga0070669_100002073 3300005353 Bacteria 14484
15 Ga0070659_100006057 3300005366 Bacteria 8724
16 Ga0070703_10000076 3300005406 Bacteria 49154
17 Ga0070703_10000194 3300005406 Bacteria 29559
18 Ga0070709_10000002 3300005434 Bacteria 322903
19 Ga0070701_10019046 3300005438 Bacteria 3237
20 Ga0070711_100000024 3300005439 Bacteria 117125
21 Ga0070711_100000030 3300005439 Bacteria 100932
22 Ga0070711_100015259 3300005439 Bacteria 4860
23 Ga0070705_100000585 3300005440 Bacteria 21206
24 Ga0070694_100043311 3300005444 Bacteria 3009
25 Ga0070708_100029359 3300005445 Bacteria 4742
26 Ga0070708_100062635 3300005445 Bacteria 3327
27 Ga0070708_100104526 3300005445 Bacteria 2597
28 Ga0070681_10003500 3300005458 Bacteria 14705
29 Ga0070681_10056553 3300005458 Bacteria 3904
30 Ga0070681_10061761 3300005458 Bacteria 3721
31 Ga0070706_100000611 3300005467 Bacteria 41308
32 Ga0070706_100001312 3300005467 Bacteria 26425
33 Ga0070706_100004047 3300005467 Bacteria 14240
34 Ga0070706_100100077 3300005467 Bacteria 2693
35 Ga0070707_100000037 3300005468 Bacteria 114708
36 Ga0070707_100003673 3300005468 Bacteria 14467
37 Ga0070699_100000065 3300005518 Bacteria 99352
38 Ga0070697_100000378 3300005536 Bacteria 34880
39 Ga0068853_100009793 3300005539 Bacteria 7735
40 Ga0068853_100011822 3300005539 Bacteria 7097
41 Ga0068853_100089374 3300005539 Bacteria 2705
42 Ga0068853_100192022 3300005539 Bacteria 1856
43 Ga0070686_100016842 3300005544 Bacteria 4258
44 Ga0070696_100000098 3300005546 Bacteria 43750
45 Ga0070696_100062358 3300005546 Bacteria 2609
46 Ga0070704_100129134 3300005549 Bacteria 1955
47 Ga0070664_100021475 3300005564 Bacteria 5321
48 Ga0068857_100115279 3300005577 Bacteria 2417
49 Ga0068854_100059803 3300005578 Bacteria 2755
50 Ga0068854_100090447 3300005578 Bacteria 2276
51 Ga0068859_100043879 3300005617 Bacteria 4494
52 Ga0068864_100235972 3300005618 Bacteria 1693
53 Ga0068858_100057417 3300005842 Bacteria 3597
54 Ga0068858_100065945 3300005842 Bacteria 3351
55 Ga0068860_100053594 3300005843 Bacteria 3835
56 Ga0068862_100200814 3300005844 Bacteria 1798
57 Ga0081539_10006623 3300005985 Bacteria 10997
58 Ga0081539_10028496 3300005985 Bacteria 3510
59 Ga0081539_10045491 3300005985 Bacteria 2524
60 Ga0070715_10000007 3300006163 Bacteria 192075
61 Ga0070716_100000002 3300006173 Bacteria 396037
62 Ga0068871_100037925 3300006358 Bacteria 3845
63 Ga0075428_100001447 3300006844 Bacteria 25370
64 Ga0075431_100045667 3300006847 Bacteria 4516
65 Ga0075431_100095122 3300006847 Bacteria 3075
66 Ga0075433_10096828 3300006852 Bacteria 2611
67 Ga0068865_100117565 3300006881 Bacteria 1971
68 Ga0075436_100006250 3300006914 Bacteria 8159
69 Ga0075436_100071472 3300006914 Bacteria 2399
70 Ga0075436_100112669 3300006914 Bacteria 1899
71 Ga0097620_100043879 3300006931 Bacteria 4494
72 Ga0075435_100019684 3300007076 Bacteria 5160
73 Ga0075435_100046653 3300007076 Bacteria 3476
74 Ga0105240_10106397 3300009093 Bacteria 3402
75 Ga0105240_10123410 3300009093 Bacteria 3116
76 Ga0111539_10045127 3300009094 Bacteria 5277
77 Ga0111539_10092179 3300009094 Bacteria 3560
78 Ga0114129_10019394 3300009147 Bacteria 9685
79 Ga0114129_10074440 3300009147 Bacteria 4730
80 Ga0114129_10296371 3300009147 Bacteria 2157
81 Ga0105243_10000044 3300009148 Bacteria 156661
82 Ga0105243_10036394 3300009148 Bacteria 3821
83 Ga0105243_10124043 3300009148 Bacteria 2182
84 Ga0105242_10000012 3300009176 Bacteria 136893
85 Ga0105242_10012528 3300009176 Bacteria 6529
86 Ga0105248_10159958 3300009177 Bacteria 2541
87 Ga0105237_10147805 3300009545 Bacteria 2345
88 Ga0105249_10000029 3300009553 Bacteria 227479
89 Ga0105239_10193361 3300010375 Bacteria 2278
90 Ga0157373_10000268 3300013100 Bacteria 41923
91 Ga0157373_10003635 3300013100 Bacteria 11649
92 Ga0157373_10041503 3300013100 Bacteria 3292
93 Ga0157371_10000363 3300013102 Bacteria 57446
94 Ga0157370_10003088 3300013104 Bacteria 19715
95 Ga0157370_10121574 3300013104 Bacteria 2438
96 Ga0157378_10066904 3300013297 Bacteria 3219
97 Ga0163162_10000009 3300013306 Bacteria 316099
98 Ga0163162_10035036 3300013306 Bacteria 4997
99 Ga0157372_10001249 3300013307 Bacteria 27471
100 Ga0157372_10005322 3300013307 Bacteria 13668
101 Ga0157372_10072718 3300013307 Bacteria 3875
102 Ga0157375_10019013 3300013308 Bacteria 6238
103 Ga0157375_10252389 3300013308 Bacteria 1925
104 Ga0163163_10216202 3300014325 Bacteria 1965
105 Ga0213876_10000017 3300021384 Bacteria 297728
106 Ga0213876_10000240 3300021384 Bacteria 52188
107 Ga0213876_10011615 3300021384 Bacteria 4702
108 Ga0209026_1002245 3300025250 Bacteria 7413
109 Ga0209233_1001645 3300025261 Bacteria 8700
110 Ga0207653_10000098 3300025885 Bacteria 63247
111 Ga0207653_10000264 3300025885 Bacteria 31899
112 Ga0207680_10037735 3300025903 Bacteria 2791
113 Ga0207647_10000082 3300025904 Bacteria 71437
114 Ga0207685_10000007 3300025905 Bacteria 278341
115 Ga0207699_10000001 3300025906 Bacteria 695560
116 Ga0207705_10017124 3300025909 Bacteria 5192
117 Ga0207684_10000230 3300025910 Bacteria 85141
118 Ga0207684_10000373 3300025910 Bacteria 60635
119 Ga0207684_10008339 3300025910 Bacteria 9213
120 Ga0207707_10020448 3300025912 Bacteria 5781
121 Ga0207707_10045915 3300025912 Bacteria 3805
122 Ga0207695_10036482 3300025913 Bacteria 5315
123 Ga0207695_10114657 3300025913 Bacteria 2669
124 Ga0207693_10016441 3300025915 Bacteria 5912
125 Ga0207663_10000008 3300025916 Bacteria 205803
126 Ga0207663_10000012 3300025916 Bacteria 167739
127 Ga0207660_10031675 3300025917 Bacteria 3645
128 Ga0207660_10168841 3300025917 Unclassified 1692
129 Ga0207662_10003003 3300025918 Bacteria 8592
130 Ga0207657_10057534 3300025919 Bacteria 3350
131 Ga0207652_10009537 3300025921 Bacteria 7806
132 Ga0207646_10000106 3300025922 Bacteria 114093
133 Ga0207646_10005222 3300025922 Bacteria 13723
134 Ga0207646_10009817 3300025922 Bacteria 9424
135 Ga0207681_10002428 3300025923 Bacteria 11814
136 Ga0207650_10002159 3300025925 Bacteria 13745
137 Ga0207644_10104606 3300025931 Bacteria 2131
138 Ga0207690_10013960 3300025932 Bacteria 4841
139 Ga0207686_10000151 3300025934 Bacteria 53049
140 Ga0207686_10031838 3300025934 Bacteria 3134
141 Ga0207709_10000029 3300025935 Bacteria 333327
142 Ga0207665_10000007 3300025939 Bacteria 177869
143 Ga0207665_10069173 3300025939 Bacteria 2407
144 Ga0207665_10099775 3300025939 Bacteria 2025
145 Ga0207661_10019419 3300025944 Bacteria 5067
146 Ga0207661_10025624 3300025944 Bacteria 4486
147 Ga0207679_10018978 3300025945 Bacteria 4615
148 Ga0207712_10000097 3300025961 Bacteria 101338
149 Ga0207668_10012760 3300025972 Bacteria 5152
150 Ga0207639_10007588 3300026041 Bacteria 7399
151 Ga0207639_10209638 3300026041 Bacteria 1676
152 Ga0207641_10011995 3300026088 Bacteria 7110
153 Ga0207676_10071390 3300026095 Bacteria 2787
154 Ga0207674_10036034 3300026116 Bacteria 5160
155 Ga0207674_10041255 3300026116 Bacteria 4774
156 Ga0207674_10138318 3300026116 Bacteria 2396
157 Ga0207698_10051106 3300026142 Bacteria 3158
158 Ga0207428_10007414 3300027907 Bacteria 10001
159 Ga0207428_10009077 3300027907 Bacteria 8940
160 Ga0207428_10021518 3300027907 Bacteria 5460
161 Ga0207428_10173429 3300027907 Bacteria 1632
162 Ga0268264_10053516 3300028381 Bacteria 3368
163 Ga0265319_1010689 3300028563 Bacteria 3816
164 Ga0265323_10000044 3300028653 Bacteria 68290
165 Ga0265323_10004885 3300028653 Bacteria 5732
166 Ga0265322_10000308 3300028654 Bacteria 20650
167 Ga0265338_10001856 3300028800 Bacteria 33182
168 Ga0265338_10045242 3300028800 Bacteria 4050
169 Ga0265338_10077028 3300028800 Bacteria 2821
170 Ga0265332_10000517 3300031238 Bacteria 26346
171 Ga0265329_10007576 3300031242 Unclassified 4185
172 Ga0265339_10039296 3300031249 Bacteria 2635
173 Ga0265331_10000468 3300031250 Bacteria 38765
174 Ga0265327_10000092 3300031251 Bacteria 195619
175 Ga0307408_100013784 3300031548 Bacteria 5367
176 Ga0265314_10003309 3300031711 Bacteria 15726
177 Ga0265342_10013337 3300031712 Bacteria 5522
178 Ga0265342_10014373 3300031712 Bacteria 5256
179 Ga0316578_10002721 3300031728 Bacteria 7864
180 Ga0307413_10002650 3300031824 Bacteria 7328
181 Ga0307410_10004049 3300031852 Bacteria 7493
182 Ga0307409_100097647 3300031995 Bacteria 2427
183 Ga0307416_100008513 3300032002 Bacteria 6628
184 Ga0307416_100051328 3300032002 Bacteria 3294
185 Ga0307414_10042499 3300032004 Bacteria 3089
186 Ga0307415_100081162 3300032126 Bacteria 2315
187 Ga0316582_0047464 3300036647 Bacteria 2712
188 Ga0373925_0041037 3300037068 Bacteria 3428
189 Ga0395905_0003499 3300037471 Bacteria 16753
190 Ga0436365_0085102 3300039437 Bacteria 4715
191 Ga0436365_0873465 3300039437 Bacteria 246686
192 Ga0436363_1304130 3300039450 Bacteria 3443
193 Ga0451577_0023538 3300042876 Bacteria 5615
194 Ga0451577_0129509 3300042876 Bacteria 2263
195 Ga0453683_0011893 3300044673 Bacteria 5724
196 Ga0453683_0064533 3300044673 Bacteria 2289
197 Ga0453683_0118242 3300044673 Unclassified 1668
198 Ga0453684_0000176 3300044712 Bacteria 283097
199 Ga0453684_0004987 3300044712 Bacteria 27002
200 Ga0453684_0057478 3300044712 Bacteria 5034
201 Ga0453684_0132517 3300044712 Bacteria 2989
202 Ga0453684_0148349 3300044712 Bacteria 2790
203 Ga0495580_0005149 3300046472 Bacteria 10876
204 Ga0495665_0029148 3300046531 Bacteria 2958
205 Ga0496109_0000027 3300048912 Bacteria 169870
206 Ga0496109_0001257 3300048912 Bacteria 21055
207 Ga0496109_0007417 3300048912 Bacteria 9282
208 Ga0496114_0032284 3300048917 Bacteria 4308
209 Ga0501034_0000105 3300049571 Bacteria 154973
210 Ga0501044_0002924 3300049823 Bacteria 19432
211 nmdc:mga05p37_607_c1 3300050507 Bacteria 39475
212 nmdc:mga06r32_108741_c1 3300050510 Bacteria 2726
213 nmdc:mga08y16_108086_c1 3300050511 Bacteria 2896
214 nmdc:mga08y16_12061_c1 3300050511 Bacteria 9081
215 nmdc:mga0n895_326120_c1 3300050512 Bacteria 1556
216 nmdc:mga0rr50_27754_c1 3300050513 Bacteria 3969
217 nmdc:mga08x19_11_c1 3300050514 Bacteria 403007
218 nmdc:mga08x19_7_c1 3300050514 Bacteria 437351
219 nmdc:mga0a205_335784_c1 3300050515 Bacteria 1380
220 nmdc:mga0a205_55430_c1 3300050515 Unclassified 3829
221 Ga0495601_0081184 3300053077 Bacteria 2081
222 Ga0500642_0023581 3300053130 Bacteria 2473
223 Ga0500616_0005150 3300053153 Bacteria 8978
224 Ga0501084_0117575 3300054114 Bacteria 2235
225 Ga0436365_0924676
226 JGI24737J22298_10007484
227 JGI24735J21928_10001647
228 JGI25406J46586_10021535
229 Ga0065707_10104530
230 Ga0070683_100028906
231 Ga0070690_100013426
232 Ga0070670_100005074
233 Ga0070670_100043194
234 Ga0070666_10018885
235 Ga0070680_100050332
236 Ga0070687_100001012
237 Ga0070687_100044857
238 Ga0070669_100002073
239 Ga0070659_100006057
240 Ga0070703_10000076
241 Ga0070703_10000194
242 Ga0070709_10000002
243 Ga0070701_10019046
244 Ga0070711_100000024
245 Ga0070711_100000030
246 Ga0070711_100015259
247 Ga0070705_100000585
248 Ga0070694_100043311
249 Ga0070708_100029359
250 Ga0070708_100062635
251 Ga0070708_100104526
252 Ga0070681_10003500
253 Ga0070681_10056553
254 Ga0070681_10061761
255 Ga0070706_100000611
256 Ga0070706_100001312
257 Ga0070706_100004047
258 Ga0070706_100100077
259 Ga0070707_100000037
260 Ga0070707_100003673
261 Ga0070699_100000065
262 Ga0070697_100000378
263 Ga0068853_100009793
264 Ga0068853_100011822
265 Ga0068853_100089374
266 Ga0068853_100192022
267 Ga0070686_100016842
268 Ga0070696_100000098
269 Ga0070696_100062358
270 Ga0070704_100129134
271 Ga0070664_100021475
272 Ga0068857_100115279
273 Ga0068854_100059803
274 Ga0068854_100090447
275 Ga0068859_100043879
276 Ga0068864_100235972
277 Ga0068858_100057417
278 Ga0068858_100065945
279 Ga0068860_100053594
280 Ga0068862_100200814
281 Ga0081539_10006623
282 Ga0081539_10028496
283 Ga0081539_10045491
284 Ga0070715_10000007
285 Ga0070716_100000002
286 Ga0068871_100037925
287 Ga0075428_100001447
288 Ga0075431_100045667
289 Ga0075431_100095122
290 Ga0075433_10096828
291 Ga0068865_100117565
292 Ga0075436_100006250
293 Ga0075436_100071472
294 Ga0075436_100112669
295 Ga0097620_100043879
296 Ga0075435_100019684
297 Ga0075435_100046653
298 Ga0105240_10106397
299 Ga0105240_10123410
300 Ga0111539_10045127
301 Ga0111539_10092179
302 Ga0114129_10019394
303 Ga0114129_10074440
304 Ga0114129_10296371
305 Ga0105243_10000044
306 Ga0105243_10036394
307 Ga0105243_10124043
308 Ga0105242_10000012
309 Ga0105242_10012528
310 Ga0105248_10159958
311 Ga0105237_10147805
312 Ga0105249_10000029
313 Ga0105239_10193361
314 Ga0157373_10000268
315 Ga0157373_10003635
316 Ga0157373_10041503
317 Ga0157371_10000363
318 Ga0157370_10003088
319 Ga0157370_10121574
320 Ga0157378_10066904
321 Ga0163162_10000009
322 Ga0163162_10035036
323 Ga0157372_10001249
324 Ga0157372_10005322
325 Ga0157372_10072718
326 Ga0157375_10019013
327 Ga0157375_10252389
328 Ga0163163_10216202
329 Ga0213876_10000017
330 Ga0213876_10000240
331 Ga0213876_10011615
332 Ga0209026_1002245
333 Ga0209233_1001645
334 Ga0207653_10000098
335 Ga0207653_10000264
336 Ga0207680_10037735
337 Ga0207647_10000082
338 Ga0207685_10000007
339 Ga0207699_10000001
340 Ga0207705_10017124
341 Ga0207684_10000230
342 Ga0207684_10000373
343 Ga0207684_10008339
344 Ga0207707_10020448
345 Ga0207707_10045915
346 Ga0207695_10036482
347 Ga0207695_10114657
348 Ga0207693_10016441
349 Ga0207663_10000008
350 Ga0207663_10000012
351 Ga0207660_10031675
352 Ga0207660_10168841
353 Ga0207662_10003003
354 Ga0207657_10057534
355 Ga0207652_10009537
356 Ga0207646_10000106
357 Ga0207646_10005222
358 Ga0207646_10009817
359 Ga0207681_10002428
360 Ga0207650_10002159
361 Ga0207644_10104606
362 Ga0207690_10013960
363 Ga0207686_10000151
364 Ga0207686_10031838
365 Ga0207709_10000029
366 Ga0207665_10000007
367 Ga0207665_10069173
368 Ga0207665_10099775
369 Ga0207661_10019419
370 Ga0207661_10025624
371 Ga0207679_10018978
372 Ga0207712_10000097
373 Ga0207668_10012760
374 Ga0207639_10007588
375 Ga0207639_10209638
376 Ga0207641_10011995
377 Ga0207676_10071390
378 Ga0207674_10036034
379 Ga0207674_10041255
380 Ga0207674_10138318
381 Ga0207698_10051106
382 Ga0207428_10007414
383 Ga0207428_10009077
384 Ga0207428_10021518
385 Ga0207428_10173429
386 Ga0268264_10053516
387 Ga0265319_1010689
388 Ga0265323_10000044
389 Ga0265323_10004885
390 Ga0265322_10000308
391 Ga0265338_10001856
392 Ga0265338_10045242
393 Ga0265338_10077028
394 Ga0265332_10000517
395 Ga0265329_10007576
396 Ga0265339_10039296
397 Ga0265331_10000468
398 Ga0265327_10000092
399 Ga0307408_100013784
400 Ga0265314_10003309
401 Ga0265342_10013337
402 Ga0265342_10014373
403 Ga0316578_10002721
404 Ga0307413_10002650
405 Ga0307410_10004049
406 Ga0307409_100097647
407 Ga0307416_100008513
408 Ga0307416_100051328
409 Ga0307414_10042499
410 Ga0307415_100081162
411 Ga0316582_0047464
412 Ga0373925_0041037
413 Ga0395905_0003499
414 Ga0436365_0085102
415 Ga0436365_0873465
416 Ga0436363_1304130
417 Ga0451577_0023538
418 Ga0451577_0129509
419 Ga0453683_0011893
420 Ga0453683_0064533
421 Ga0453683_0118242
422 Ga0453684_0000176
423 Ga0453684_0004987
424 Ga0453684_0057478
425 Ga0453684_0132517
426 Ga0453684_0148349
427 Ga0495580_0005149
428 Ga0495665_0029148
429 Ga0496109_0000027
430 Ga0496109_0001257
431 Ga0496109_0007417
432 Ga0496114_0032284
433 Ga0501034_0000105
434 Ga0501044_0002924
435 nmdc:mga05p37_607_c1
436 nmdc:mga06r32_108741_c1
437 nmdc:mga08y16_108086_c1
438 nmdc:mga08y16_12061_c1
439 nmdc:mga0n895_326120_c1
440 nmdc:mga0rr50_27754_c1
441 nmdc:mga08x19_11_c1
442 nmdc:mga08x19_7_c1
443 nmdc:mga0a205_335784_c1
444 nmdc:mga0a205_55430_c1
445 Ga0495601_0081184
446 Ga0500642_0023581
447 Ga0500616_0005150
448 Ga0501084_0117575

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13282

DUF4070

Domain of unknown function (DUF4070)

415

551

0.95

PF02310

B12-binding

B12 binding domain

86

186

0.91

PF04055

Radical_SAM

Radical SAM superfamily

227

396

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fd2-assembly1.cif.gz_B radical sam 1,2-diol dehydratase aprd4 in complex with its substrate paromamine 0.7821 2 415
4jc0-assembly2.cif.gz_B crystal structure of thermotoga maritima holo rimo in complex with pentasulfide, northeast structural genomics consortium target vr77 0.761 33 414
3jwp-assembly1.cif.gz_A crystal structure of plasmodium falciparum sir2a (pf13_0152) in complex with amp 0.7323 60 98
2qgq-assembly4.cif.gz_D crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.7212 166 414
6fd2-assembly1.cif.gz_B radical sam 1,2-diol dehydratase aprd4 in complex with its substrate paromamine 0.7184 2 415
ID Description Score Start End Superfamily
af_Q58275_166_383_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8312 168 364 3.80.30.20
af_P96395_164_380_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8284 165 366 3.80.30.20
af_Q58882_171_402_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8036 169 361 3.80.30.20
af_Q2FXZ6_140_373_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.7884 166 417 3.80.30.20
af_Q4CUJ9_220_394_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.7862 238 366 3.30.750.200
ID Description Score Start End GO Terms
AF-A0A0G0Y8B6-F1-model_v4 Radical SAM core domain-containing protein 0.9889 1 320 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051536
AF-A0A7C2NGB0-F1-model_v4 Radical SAM protein 0.9883 1 294 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051539
AF-A0A352FEM1-F1-model_v4 B12-binding domain-containing radical SAM protein 0.988 1 499 GO:0003824
GO:0005829
GO:0046872
GO:0051539
AF-A0A832CQQ7-F1-model_v4 B12-binding domain-containing radical SAM protein 0.9876 1 280 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051536
AF-X1EJE6-F1-model_v4 Uncharacterized protein 0.9864 72 382 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051539

Map