F336368

General Info

Members Datasets Scaffolds Average Seq Length
224 174 448 308

Family's Representative Sequence

Representative Sequence 3300005347|Ga0070668_100264541|Ga0070668_1002645412
Length 329
Sequence MTAVAERPAQTAPHPPPKSRLSAKARWIRRAPLLPALIFTIVITQIPFLVTLVISSFKWNVLTPGDKDFLGLGNYTEVVGLQNYKTVFTDPRLRAAVLNTIILTLAIVVISLLIGLALAVLLDRRFPGRGLARTLLIAPFLVMPVASALIWKHVLYNPTYGLFDGVLNWIWQLFGADSGPVVDWVSTAPKSAVIAALVWQWTPFFMLILLAGLQAQPTDILEAAKVDGANGIKTFRWITLPHLRQYIELSILLGSIYILQTFDAVFSITQGGPGTATTNLPYEIYLTMFRKYEYGEAAAAGVVTVVGTIIVATFALRVVSSLFREEMKR

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
72 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
73 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
74 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
77 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
78 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
81 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
88 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
89 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
94 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
98 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
102 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
107 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
108 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
109 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
117 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
123 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
124 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
132 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
138 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
139 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
140 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
141 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
142 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
143 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
144 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
146 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
147 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
148 2643221548 Streptomyces sp. Root55 Isolate Unclassified
149 2643221578 Streptomyces sp. Root63 Isolate Unclassified
150 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
151 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
152 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
153 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
154 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
155 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
156 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
157 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
158 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
159 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
160 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
161 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
162 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
163 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
164 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
165 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
166 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
167 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
168 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
169 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
170 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
171 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
172 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
173 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
174 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.82
Metatranscriptomes 0.45
Isolates 14.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.46
Nodule 0
Rhizoplane 4.46
Rhizosphere 73.21
Stem 0
Stem Tuber 0
Unclassified 0.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100264541 3300005347 Bacteria 1431
2 JGI25406J46586_10003901 3300003203 Bacteria 6973
3 JGI25407J50210_10001388 3300003373 Bacteria 5493
4 JGI25407J50210_10002848 3300003373 Bacteria 4117
5 JGI25407J50210_10003627 3300003373 Bacteria 3711
6 Ga0070683_100011982 3300005329 Bacteria 7522
7 Ga0068869_100120723 3300005334 Bacteria 2004
8 Ga0068868_100148171 3300005338 Bacteria 1931
9 Ga0068868_100370917 3300005338 Bacteria 1230
10 Ga0070668_100000286 3300005347 Bacteria 33488
11 Ga0070668_100022689 3300005347 Bacteria 4745
12 Ga0070700_100100822 3300005441 Bacteria 1902
13 Ga0070708_100234502 3300005445 Unclassified 1722
14 Ga0070662_100034391 3300005457 Bacteria 3573
15 Ga0070696_100037228 3300005546 Bacteria 3356
16 Ga0070696_100100214 3300005546 Bacteria 2074
17 Ga0070665_100569215 3300005548 Bacteria 1146
18 Ga0068855_100033613 3300005563 Bacteria 6118
19 Ga0068854_100274415 3300005578 Bacteria 1355
20 Ga0068856_100098344 3300005614 Bacteria 2916
21 Ga0068856_100103598 3300005614 Bacteria 2839
22 Ga0070702_100001904 3300005615 Bacteria 8755
23 Ga0068859_100344467 3300005617 Bacteria 1585
24 Ga0068861_100000238 3300005719 Bacteria 30220
25 Ga0068863_100255091 3300005841 Bacteria 1695
26 Ga0068858_100190044 3300005842 Bacteria 1940
27 Ga0068860_100122175 3300005843 Bacteria 2494
28 Ga0081455_10280508 3300005937 Bacteria 1204
29 Ga0081538_10000603 3300005981 Bacteria 39795
30 Ga0081538_10000610 3300005981 Bacteria 39608
31 Ga0081538_10001683 3300005981 Bacteria 22527
32 Ga0081538_10002250 3300005981 Bacteria 19107
33 Ga0081538_10002603 3300005981 Bacteria 17492
34 Ga0081538_10006775 3300005981 Bacteria 10012
35 Ga0081538_10018492 3300005981 Bacteria 5231
36 Ga0081538_10022980 3300005981 Bacteria 4496
37 Ga0081540_1018970 3300005983 Bacteria 4200
38 Ga0081539_10000659 3300005985 Bacteria 69319
39 Ga0081539_10000664 3300005985 Bacteria 69034
40 Ga0081539_10003496 3300005985 Bacteria 19196
41 Ga0081539_10007487 3300005985 Bacteria 9928
42 Ga0081539_10010056 3300005985 Bacteria 7778
43 Ga0081539_10010804 3300005985 Bacteria 7347
44 Ga0075367_10000960 3300006178 Bacteria 11769
45 Ga0068871_100489064 3300006358 Bacteria 1108
46 Ga0075428_100220389 3300006844 Bacteria 2049
47 Ga0075428_100705511 3300006844 Bacteria 1075
48 Ga0075430_100160721 3300006846 Bacteria 1870
49 Ga0075430_100223557 3300006846 Bacteria 1562
50 Ga0075431_100086991 3300006847 Bacteria 3225
51 Ga0075431_100402581 3300006847 Bacteria 1369
52 Ga0068865_100073281 3300006881 Bacteria 2435
53 Ga0097620_100344490 3300006931 Bacteria 1585
54 Ga0111539_10358065 3300009094 Bacteria 1698
55 Ga0105245_10005848 3300009098 Bacteria 10801
56 Ga0114129_10012656 3300009147 Bacteria 12012
57 Ga0114129_10665647 3300009147 Bacteria 1342
58 Ga0105242_10231123 3300009176 Bacteria 1657
59 Ga0105237_10098116 3300009545 Bacteria 2921
60 Ga0105238_10292324 3300009551 Bacteria 1612
61 Ga0105238_10370470 3300009551 Bacteria 1423
62 Ga0105249_10001216 3300009553 Bacteria 22699
63 Ga0105239_10176123 3300010375 Bacteria 2392
64 Ga0105239_10433252 3300010375 Bacteria 1490
65 Ga0157371_10360295 3300013102 Bacteria 1060
66 Ga0157378_10044906 3300013297 Bacteria 3925
67 Ga0163162_10012297 3300013306 Bacteria 8355
68 Ga0157372_10171877 3300013307 Bacteria 2507
69 Ga0157372_10210107 3300013307 Bacteria 2255
70 Ga0157372_10644090 3300013307 Bacteria 1234
71 Ga0163163_10152624 3300014325 Bacteria 2353
72 Ga0157377_10021283 3300014745 Bacteria 3410
73 Ga0183367_1007 3300015688 Bacteria 498079
74 Ga0163161_10228806 3300017792 Bacteria 1442
75 Ga0224712_10053972 3300022467 Bacteria 1576
76 Ga0207653_10007495 3300025885 Bacteria 3400
77 Ga0207688_10149285 3300025901 Bacteria 1380
78 Ga0207647_10013710 3300025904 Bacteria 5612
79 Ga0207671_10032724 3300025914 Bacteria 3868
80 Ga0207646_10209200 3300025922 Unclassified 1762
81 Ga0207646_10324009 3300025922 Bacteria 1392
82 Ga0207694_10262693 3300025924 Bacteria 1414
83 Ga0207687_10006879 3300025927 Bacteria 7492
84 Ga0207687_10297898 3300025927 Bacteria 1298
85 Ga0207706_10004515 3300025933 Bacteria 13072
86 Ga0207709_10028767 3300025935 Bacteria 3216
87 Ga0207689_10149530 3300025942 Bacteria 1925
88 Ga0207661_10162109 3300025944 Bacteria 1941
89 Ga0207661_10378924 3300025944 Bacteria 1280
90 Ga0207679_10366637 3300025945 Bacteria 1259
91 Ga0207667_10029828 3300025949 Bacteria 5909
92 Ga0207712_10010213 3300025961 Bacteria 5953
93 Ga0207668_10000989 3300025972 Bacteria 17085
94 Ga0207703_10161944 3300026035 Bacteria 1960
95 Ga0207708_10016694 3300026075 Bacteria 5525
96 Ga0207675_100006850 3300026118 Bacteria 10792
97 Ga0207698_10264995 3300026142 Bacteria 1580
98 Ga0268265_10160827 3300028380 Bacteria 1907
99 Ga0307517_10092883 3300028786 Bacteria 2451
100 Ga0307515_10069676 3300028794 Bacteria 4801
101 Ga0307511_10011026 3300030521 Bacteria 8923
102 Ga0307511_10114292 3300030521 Bacteria 1702
103 Ga0307512_10002645 3300030522 Bacteria 22132
104 Ga0307512_10109711 3300030522 Bacteria 1825
105 Ga0316177_1169278 3300030731 Bacteria 6244
106 Ga0314311_1008286 3300030733 Bacteria 5383
107 Ga0307513_10002709 3300031456 Bacteria 24380
108 Ga0307513_10002942 3300031456 Bacteria 23296
109 Ga0307513_10013224 3300031456 Bacteria 10130
110 Ga0307513_10104642 3300031456 Bacteria 2843
111 Ga0307509_10008977 3300031507 Bacteria 12602
112 Ga0307509_10273562 3300031507 Bacteria 1455
113 Ga0307508_10002737 3300031616 Bacteria 18396
114 Ga0307508_10214794 3300031616 Bacteria 1523
115 Ga0307516_10065598 3300031730 Bacteria 3505
116 Ga0307413_10015228 3300031824 Bacteria 3935
117 Ga0307518_10144985 3300031838 Bacteria 1650
118 Ga0307410_10283716 3300031852 Bacteria 1300
119 Ga0307407_10005522 3300031903 Bacteria 5498
120 Ga0307412_10086826 3300031911 Bacteria 2178
121 Ga0307409_100041685 3300031995 Bacteria 3431
122 Ga0307409_100098259 3300031995 Bacteria 2420
123 Ga0307416_100018284 3300032002 Bacteria 4933
124 Ga0307415_100016903 3300032126 Bacteria 4362
125 Ga0307507_10163481 3300033179 Bacteria 1638
126 Ga0373955_0116830 3300035172 Bacteria 1547
127 Ga0373942_0000198 3300035207 Bacteria 15469
128 Ga0395900_0061343 3300037418 Bacteria 3866
129 Ga0395905_0065241 3300037471 Bacteria 3409
130 Ga0395901_0100086 3300038443 Bacteria 3040
131 Ga0395901_0108300 3300038443 Bacteria 2917
132 Ga0451841_0056504 3300041498 Bacteria 1854
133 Ga0451853_1558946 3300041512 Bacteria 1957
134 Ga0466970_0002157 3300044765 Bacteria 9500
135 Ga0466960_0004405 3300044901 Bacteria 5502
136 Ga0466960_0086490 3300044901 Bacteria 1589
137 Ga0495592_0099615 3300046454 Bacteria 2072
138 Ga0495603_0009305 3300046455 Bacteria 5940
139 Ga0495629_0014871 3300046459 Bacteria 5598
140 Ga0495638_0014748 3300046460 Bacteria 5272
141 Ga0495594_0028507 3300046499 Bacteria 3013
142 Ga0495594_0033160 3300046499 Bacteria 2806
143 Ga0495618_0005268 3300046514 Bacteria 7906
144 Ga0495628_0018509 3300046516 Bacteria 5768
145 Ga0495643_0004657 3300046522 Bacteria 9527
146 Ga0495652_0077172 3300046529 Bacteria 2762
147 Ga0495622_0008485 3300046557 Bacteria 4757
148 Ga0495634_0251489 3300046642 Bacteria 1081
149 Ga0495625_0076028 3300046660 Bacteria 2349
150 Ga0495657_0003527 3300046675 Bacteria 12758
151 Ga0495658_0014939 3300046683 Bacteria 3978
152 Ga0495613_0002412 3300046689 Bacteria 14134
153 Ga0495613_0083340 3300046689 Bacteria 2322
154 Ga0495589_0020153 3300046794 Bacteria 3412
155 Ga0495604_0221851 3300047317 Bacteria 1301
156 Ga0495676_0029497 3300047321 Bacteria 4669
157 Ga0495680_0005205 3300047322 Bacteria 12274
158 Ga0495683_0070263 3300047323 Bacteria 1719
159 Ga0495685_049486 3300047447 Bacteria 1427
160 Ga0496100_0004044 3300048903 Bacteria 7729
161 Ga0496101_0081126 3300048904 Bacteria 2398
162 Ga0496102_0030174 3300048905 Bacteria 4852
163 Ga0496103_0038440 3300048906 Bacteria 2936
164 Ga0496106_0005644 3300048909 Bacteria 9258
165 Ga0496107_0025197 3300048910 Bacteria 4209
166 Ga0496108_0002178 3300048911 Bacteria 15718
167 Ga0496110_0656740 3300048913 Bacteria 949
168 Ga0496112_0033244 3300048915 Bacteria 5012
169 Ga0496114_0034761 3300048917 Bacteria 4160
170 Ga0501067_0108603 3300049583 Bacteria 1542
171 Ga0501068_0037645 3300049584 Bacteria 2896
172 Ga0501070_0237062 3300049586 Bacteria 1494
173 nmdc:mga0yw44_104287_c1 3300050492 Bacteria 1810
174 nmdc:mga06z11_2699_c1 3300050494 Bacteria 6795
175 nmdc:mga05p37_172566_c1 3300050507 Bacteria 2636
176 nmdc:mga05p37_618993_c1 3300050507 Bacteria 1219
177 nmdc:mga09592_81136_c1 3300050508 Bacteria 2764
178 nmdc:mga0qj67_103265_c1 3300050509 Bacteria 2299
179 nmdc:mga0qj67_175824_c1 3300050509 Bacteria 1738
180 nmdc:mga08y16_352702_c1 3300050511 Bacteria 1511
181 Ga0495655_0006051 3300053083 Bacteria 2176
182 Ga0495655_0045988 3300053083 Bacteria 1136
183 Ga0500578_0185438 3300053086 Bacteria 1280
184 Ga0500553_099997 3300053101 Bacteria 1250
185 Ga0500614_008675 3300053123 Bacteria 2158
186 Ga0500573_0057897 3300053140 Bacteria 2223
187 Ga0500600_0035675 3300053149 Bacteria 2897
188 Ga0500616_0000095 3300053153 Bacteria 180630
189 Ga0500616_0008880 3300053153 Bacteria 6175
190 Ga0590075_025579 3300059424 Bacteria 1484
191 Ga0530510_0068972 3300061734 Bacteria 2566
192 2585313379 2582581314 Bacteria 11452267
193 2623589139 2622736626 Bacteria 7181580
194 2643760547 2643221548 Bacteria 8053412
195 2643901038 2643221578 Bacteria 9213798
196 2644407182 2643221673 Bacteria 9196637
197 2644435514 2643221678 Bacteria 9540101
198 2644459630 2643221682 Bacteria 6743283
199 2729907728 2728369276 Bacteria 5610032
200 2731909117 2731639228 Bacteria 4187555
201 2739606571 2739367654 Bacteria 6049412
202 2753269472 2751185782 Bacteria 11227053
203 2808844581 2808606359 Bacteria 9866990
204 2808848136 2808606359 Bacteria 9866990
205 2808914425 2808606375 Bacteria 9466072
206 2808916728 2808606375 Bacteria 9466072
207 2808917154 2808606375 Bacteria 9466072
208 2811843262 2808606982 Bacteria 7791042
209 2811843809 2808606982 Bacteria 7791042
210 2812358676 2811994879 Bacteria 9313447
211 2819699254 2818991463 Bacteria 7948711
212 2831940562 2831935698 Bacteria 5963223
213 2832005108 2832004796 Bacteria 6538017
214 2837269854 2837268691 Bacteria 7850704
215 2862515275 2862507626 Bacteria 9425308
216 2866068413 2866065130 Bacteria 6518152
217 2867314457 2867312974 Bacteria 7058875
218 2867323285 2867319477 Bacteria 7069771
219 2868093337 2868088558 Bacteria 7609351
220 2887444400 2887443736 Bacteria 4426037
221 2919470155 2919468124 Bacteria 9133025
222 2946045945 2946045630 Bacteria 8527308
223 2947232576 2947224130 Bacteria 9938529
224 2966604951 2966598605 Bacteria 7676064
225 Ga0070668_100264541
226 JGI25406J46586_10003901
227 JGI25407J50210_10001388
228 JGI25407J50210_10002848
229 JGI25407J50210_10003627
230 Ga0070683_100011982
231 Ga0068869_100120723
232 Ga0068868_100148171
233 Ga0068868_100370917
234 Ga0070668_100000286
235 Ga0070668_100022689
236 Ga0070700_100100822
237 Ga0070708_100234502
238 Ga0070662_100034391
239 Ga0070696_100037228
240 Ga0070696_100100214
241 Ga0070665_100569215
242 Ga0068855_100033613
243 Ga0068854_100274415
244 Ga0068856_100098344
245 Ga0068856_100103598
246 Ga0070702_100001904
247 Ga0068859_100344467
248 Ga0068861_100000238
249 Ga0068863_100255091
250 Ga0068858_100190044
251 Ga0068860_100122175
252 Ga0081455_10280508
253 Ga0081538_10000603
254 Ga0081538_10000610
255 Ga0081538_10001683
256 Ga0081538_10002250
257 Ga0081538_10002603
258 Ga0081538_10006775
259 Ga0081538_10018492
260 Ga0081538_10022980
261 Ga0081540_1018970
262 Ga0081539_10000659
263 Ga0081539_10000664
264 Ga0081539_10003496
265 Ga0081539_10007487
266 Ga0081539_10010056
267 Ga0081539_10010804
268 Ga0075367_10000960
269 Ga0068871_100489064
270 Ga0075428_100220389
271 Ga0075428_100705511
272 Ga0075430_100160721
273 Ga0075430_100223557
274 Ga0075431_100086991
275 Ga0075431_100402581
276 Ga0068865_100073281
277 Ga0097620_100344490
278 Ga0111539_10358065
279 Ga0105245_10005848
280 Ga0114129_10012656
281 Ga0114129_10665647
282 Ga0105242_10231123
283 Ga0105237_10098116
284 Ga0105238_10292324
285 Ga0105238_10370470
286 Ga0105249_10001216
287 Ga0105239_10176123
288 Ga0105239_10433252
289 Ga0157371_10360295
290 Ga0157378_10044906
291 Ga0163162_10012297
292 Ga0157372_10171877
293 Ga0157372_10210107
294 Ga0157372_10644090
295 Ga0163163_10152624
296 Ga0157377_10021283
297 Ga0183367_1007
298 Ga0163161_10228806
299 Ga0224712_10053972
300 Ga0207653_10007495
301 Ga0207688_10149285
302 Ga0207647_10013710
303 Ga0207671_10032724
304 Ga0207646_10209200
305 Ga0207646_10324009
306 Ga0207694_10262693
307 Ga0207687_10006879
308 Ga0207687_10297898
309 Ga0207706_10004515
310 Ga0207709_10028767
311 Ga0207689_10149530
312 Ga0207661_10162109
313 Ga0207661_10378924
314 Ga0207679_10366637
315 Ga0207667_10029828
316 Ga0207712_10010213
317 Ga0207668_10000989
318 Ga0207703_10161944
319 Ga0207708_10016694
320 Ga0207675_100006850
321 Ga0207698_10264995
322 Ga0268265_10160827
323 Ga0307517_10092883
324 Ga0307515_10069676
325 Ga0307511_10011026
326 Ga0307511_10114292
327 Ga0307512_10002645
328 Ga0307512_10109711
329 Ga0316177_1169278
330 Ga0314311_1008286
331 Ga0307513_10002709
332 Ga0307513_10002942
333 Ga0307513_10013224
334 Ga0307513_10104642
335 Ga0307509_10008977
336 Ga0307509_10273562
337 Ga0307508_10002737
338 Ga0307508_10214794
339 Ga0307516_10065598
340 Ga0307413_10015228
341 Ga0307518_10144985
342 Ga0307410_10283716
343 Ga0307407_10005522
344 Ga0307412_10086826
345 Ga0307409_100041685
346 Ga0307409_100098259
347 Ga0307416_100018284
348 Ga0307415_100016903
349 Ga0307507_10163481
350 Ga0373955_0116830
351 Ga0373942_0000198
352 Ga0395900_0061343
353 Ga0395905_0065241
354 Ga0395901_0100086
355 Ga0395901_0108300
356 Ga0451841_0056504
357 Ga0451853_1558946
358 Ga0466970_0002157
359 Ga0466960_0004405
360 Ga0466960_0086490
361 Ga0495592_0099615
362 Ga0495603_0009305
363 Ga0495629_0014871
364 Ga0495638_0014748
365 Ga0495594_0028507
366 Ga0495594_0033160
367 Ga0495618_0005268
368 Ga0495628_0018509
369 Ga0495643_0004657
370 Ga0495652_0077172
371 Ga0495622_0008485
372 Ga0495634_0251489
373 Ga0495625_0076028
374 Ga0495657_0003527
375 Ga0495658_0014939
376 Ga0495613_0002412
377 Ga0495613_0083340
378 Ga0495589_0020153
379 Ga0495604_0221851
380 Ga0495676_0029497
381 Ga0495680_0005205
382 Ga0495683_0070263
383 Ga0495685_049486
384 Ga0496100_0004044
385 Ga0496101_0081126
386 Ga0496102_0030174
387 Ga0496103_0038440
388 Ga0496106_0005644
389 Ga0496107_0025197
390 Ga0496108_0002178
391 Ga0496110_0656740
392 Ga0496112_0033244
393 Ga0496114_0034761
394 Ga0501067_0108603
395 Ga0501068_0037645
396 Ga0501070_0237062
397 nmdc:mga0yw44_104287_c1
398 nmdc:mga06z11_2699_c1
399 nmdc:mga05p37_172566_c1
400 nmdc:mga05p37_618993_c1
401 nmdc:mga09592_81136_c1
402 nmdc:mga0qj67_103265_c1
403 nmdc:mga0qj67_175824_c1
404 nmdc:mga08y16_352702_c1
405 Ga0495655_0006051
406 Ga0495655_0045988
407 Ga0500578_0185438
408 Ga0500553_099997
409 Ga0500614_008675
410 Ga0500573_0057897
411 Ga0500600_0035675
412 Ga0500616_0000095
413 Ga0500616_0008880
414 Ga0590075_025579
415 Ga0530510_0068972
416 2585313379
417 2623589139
418 2643760547
419 2643901038
420 2644407182
421 2644435514
422 2644459630
423 2729907728
424 2731909117
425 2739606571
426 2753269472
427 2808844581
428 2808848136
429 2808914425
430 2808916728
431 2808917154
432 2811843262
433 2811843809
434 2812358676
435 2819699254
436 2831940562
437 2832005108
438 2837269854
439 2862515275
440 2866068413
441 2867314457
442 2867323285
443 2868093337
444 2887444400
445 2919470155
446 2946045945
447 2947232576
448 2966604951

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

111

325

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hps-assembly1.cif.gz_A lpqy-sugabc in state 5 0.9089 25 301
8ja7-assembly1.cif.gz_A cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.9016 25 300
7cad-assembly1.cif.gz_A mycobacterium smegmatis sugabc complex 0.8928 23 299
7cad-assembly1.cif.gz_A mycobacterium smegmatis sugabc complex 0.8868 23 299
8hpl-assembly1.cif.gz_A lpqy-sugabc in state 1 0.884 23 299
ID Description Score Start End Superfamily
af_O53484_49_294_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9362 69 301 1.10.3720.10
af_P9WG03_18_293_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9159 25 297 1.10.3720.10
af_I6XFF3_60_302_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9138 69 301 1.10.3720.10
af_P71896_49_286_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9097 69 307 1.10.3720.10
af_P9WG03_18_293_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9003 25 297 1.10.3720.10
ID Description Score Start End GO Terms
AF-X1UY65-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9395 48 298 GO:0005886
GO:0055085
AF-A0A7C7HKL4-F1-model_v4 deleted 0.9394 46 302
AF-A0A660RCX8-F1-model_v4 Sugar ABC transporter permease 0.9388 43 302 GO:0005886
GO:0055085
AF-A0A4Q3J674-F1-model_v4 Sugar ABC transporter permease 0.9379 91 297 GO:0005886
GO:0055085
AF-G9BGQ4-F1-model_v4 Palatinose permease 0.9361 58 290 GO:0005886
GO:0055085

Map