F335984

General Info

Members Datasets Scaffolds Average Seq Length
223 154 203 290

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0060211|Ga0496108_0060211_1758_2759
Length 333
Sequence VTGLDRAEHAAVNVFFAFAPSRTYQCLVHLSLQGTELPNHMAEAARSNSSSLADLRGEIDRIDEAMHRLLMQRGDIIDRLIKVKKTQESGSAFRPAREAAMMRSLVQRHRGMLPLDTVEGIWRVIIATFTYVQAPFSVHADLSEGDARMRDSERFHFGFTVPFVAHAGAASVVAAVSGSKGDLGLVPAFATAGAGAWWSTLEFDAAPKIIARLPFVERPHHPAALPVFVISRAAPDALAKEVALWSVRLSGWNARVAQQAATLGEVIAVPDTAFDGVALLISMPEGKRIEEATSALVQCGASLRSATLVGSHARQYRIPADAGEPAAEARSRA

Samples

Sample ID Description Type Environment
1 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
2 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
3 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
4 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
5 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
6 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
7 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
8 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
9 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
10 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
11 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
12 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
13 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
79 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
80 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
81 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
82 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
83 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
89 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
90 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 641522639 Methylobacterium sp. 4-46 Isolate Nodule
149 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
150 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
151 8019619141 Bradyrhizobium sp. GM7.3 Isolate Nodule
152 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
153 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
154 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.03
Metatranscriptomes 0
Isolates 8.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.69
Nodule 7.17
Rhizoplane 16.14
Rhizosphere 66.37
Stem 0
Stem Tuber 0
Unclassified 7.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100032771 3300005329 Bacteria 4734
2 Ga0070670_100227614 3300005331 Bacteria 1622
3 Ga0070680_100096111 3300005336 Bacteria 2457
4 Ga0070689_100177882 3300005340 Bacteria 1726
5 Ga0070687_100033636 3300005343 Bacteria 2532
6 Ga0070671_100234174 3300005355 Bacteria 1558
7 Ga0070673_100175993 3300005364 Bacteria 1829
8 Ga0070667_100291089 3300005367 Bacteria 1469
9 Ga0070714_100059337 3300005435 Bacteria 3280
10 Ga0070710_10053148 3300005437 Bacteria 2281
11 Ga0070681_10231241 3300005458 Bacteria 1763
12 Ga0070681_10263887 3300005458 Bacteria 1634
13 Ga0070679_100026568 3300005530 Bacteria 5690
14 Ga0068853_100089343 3300005539 Bacteria 2706
15 Ga0068855_100094887 3300005563 Bacteria 3439
16 Ga0068854_100036832 3300005578 Bacteria 3431
17 Ga0068863_100117254 3300005841 Bacteria 2537
18 Ga0068863_100317531 3300005841 Bacteria 1513
19 Ga0068862_100247772 3300005844 Bacteria 1622
20 Ga0081455_10005356 3300005937 Bacteria 14084
21 Ga0081455_10008306 3300005937 Bacteria 10814
22 Ga0081540_1002834 3300005983 Bacteria 14044
23 Ga0081539_10011677 3300005985 Bacteria 6905
24 Ga0075365_10035613 3300006038 Bacteria 3221
25 Ga0075363_100035704 3300006048 Bacteria 2603
26 Ga0075367_10030194 3300006178 Bacteria 3106
27 Ga0075369_10023149 3300006186 Bacteria 2566
28 Ga0075366_10113584 3300006195 Bacteria 1630
29 Ga0075370_10018975 3300006353 Bacteria 3736
30 Ga0075431_100006206 3300006847 Bacteria 11866
31 Ga0075431_100035842 3300006847 Bacteria 5107
32 Ga0075429_100004721 3300006880 Bacteria 11729
33 Ga0075429_100216034 3300006880 Bacteria 1680
34 Ga0075429_100227618 3300006880 Bacteria 1633
35 Ga0105240_10094443 3300009093 Bacteria 3648
36 Ga0105240_10128061 3300009093 Bacteria 3048
37 Ga0111539_10000115 3300009094 Bacteria 88645
38 Ga0105245_10562965 3300009098 Bacteria 1163
39 Ga0114129_10001209 3300009147 Bacteria 34278
40 Ga0114129_10276703 3300009147 Bacteria 2244
41 Ga0105241_10358218 3300009174 Bacteria 1269
42 Ga0105248_10069005 3300009177 Bacteria 3969
43 Ga0105238_10015798 3300009551 Bacteria 7641
44 Ga0099796_10001206 3300010159 Bacteria 5037
45 Ga0105239_10492926 3300010375 Bacteria 1393
46 Ga0105246_10034364 3300011119 Bacteria 3377
47 Ga0157373_10076086 3300013100 Bacteria 2369
48 Ga0157370_10248719 3300013104 Bacteria 1645
49 Ga0157369_10130340 3300013105 Bacteria 2665
50 Ga0157378_10140602 3300013297 Bacteria 2241
51 Ga0157372_10236625 3300013307 Bacteria 2118
52 Ga0213874_10008970 3300021377 Bacteria 2457
53 Ga0213874_10035485 3300021377 Bacteria 1465
54 Ga0213876_10036155 3300021384 Bacteria 2605
55 Ga0213876_10062521 3300021384 Bacteria 1965
56 Ga0207692_10022583 3300025898 Bacteria 2897
57 Ga0207647_10096766 3300025904 Bacteria 1756
58 Ga0207699_10156233 3300025906 Bacteria 1514
59 Ga0207707_10276134 3300025912 Bacteria 1456
60 Ga0207695_10325411 3300025913 Bacteria 1426
61 Ga0207660_10181945 3300025917 Bacteria 1633
62 Ga0207662_10037929 3300025918 Bacteria 2823
63 Ga0207652_10052592 3300025921 Bacteria 3496
64 Ga0207681_10064182 3300025923 Bacteria 2535
65 Ga0207694_10275611 3300025924 Bacteria 1381
66 Ga0207650_10212018 3300025925 Bacteria 1556
67 Ga0207670_10008226 3300025936 Bacteria 5872
68 Ga0207670_10093465 3300025936 Bacteria 2131
69 Ga0207665_10099559 3300025939 Bacteria 2028
70 Ga0207711_10030704 3300025941 Bacteria 4533
71 Ga0207640_10150544 3300025981 Bacteria 1709
72 Ga0207641_10329128 3300026088 Bacteria 1451
73 Ga0209179_1020112 3300027512 Bacteria 1293
74 Ga0207428_10002405 3300027907 Bacteria 18695
75 Ga0268266_10138369 3300028379 Bacteria 2183
76 Ga0265330_10020426 3300031235 Bacteria 3026
77 Ga0265328_10000668 3300031239 Bacteria 15940
78 Ga0265328_10000748 3300031239 Bacteria 15070
79 Ga0265329_10012011 3300031242 Bacteria 3129
80 Ga0265329_10069893 3300031242 Bacteria 1110
81 Ga0265340_10012463 3300031247 Bacteria 4490
82 Ga0265331_10001693 3300031250 Bacteria 15906
83 Ga0265331_10005664 3300031250 Bacteria 7502
84 Ga0265331_10005916 3300031250 Bacteria 7314
85 Ga0265327_10042445 3300031251 Bacteria 2441
86 Ga0265316_10004443 3300031344 Bacteria 13964
87 Ga0265316_10023103 3300031344 Bacteria 5228
88 Ga0265316_10130629 3300031344 Bacteria 1892
89 Ga0307508_10204001 3300031616 Bacteria 1577
90 Ga0265314_10011879 3300031711 Bacteria 7153
91 Ga0265342_10000963 3300031712 Bacteria 28564
92 Ga0373943_0100785 3300035170 Bacteria 1510
93 Ga0373943_0171042 3300035170 Bacteria 1189
94 Ga0373961_0015321 3300035241 Bacteria 1958
95 Ga0373931_0034400 3300035691 Bacteria 2630
96 Ga0373935_0005926 3300035692 Bacteria 7243
97 Ga0373935_0085162 3300035692 Bacteria 2060
98 Ga0373927_0015144 3300035695 Bacteria 5098
99 Ga0373927_0058072 3300035695 Bacteria 2502
100 Ga0373947_0062175 3300035725 Bacteria 2271
101 Ga0373947_0433458 3300035725 Bacteria 889
102 Ga0373925_0028589 3300037068 Bacteria 4085
103 Ga0373925_0043417 3300037068 Bacteria 3337
104 Ga0373925_0319528 3300037068 Bacteria 1256
105 Ga0395899_0083513 3300037312 Bacteria 2322
106 Ga0395900_0003102 3300037418 Bacteria 18039
107 Ga0395900_0008452 3300037418 Bacteria 10584
108 Ga0395900_0199919 3300037418 Bacteria 2023
109 Ga0395900_0248977 3300037418 Bacteria 1779
110 Ga0395898_0017292 3300037466 Bacteria 7366
111 Ga0395898_0021942 3300037466 Bacteria 6467
112 Ga0395898_0066433 3300037466 Bacteria 3494
113 Ga0395898_0507087 3300037466 Bacteria 1147
114 Ga0436364_0392825 3300037853 Bacteria 3130
115 Ga0395901_0006170 3300038443 Bacteria 12147
116 Ga0395901_0029783 3300038443 Bacteria 5622
117 Ga0395901_0081069 3300038443 Bacteria 3389
118 Ga0436365_0199567 3300039437 Bacteria 1133
119 Ga0436365_0396709 3300039437 Bacteria 84982
120 Ga0436365_0697984 3300039437 Bacteria 4499
121 Ga0436365_1363267 3300039437 Bacteria 2121
122 Ga0436363_0740852 3300039450 Bacteria 8725
123 Ga0436363_1223973 3300039450 Bacteria 25443
124 Ga0466961_0126389 3300044693 Bacteria 1604
125 Ga0466963_0065933 3300044694 Bacteria 2428
126 Ga0466963_0125551 3300044694 Bacteria 1769
127 Ga0466971_0110646 3300044719 Bacteria 1267
128 Ga0466957_0087755 3300044842 Bacteria 1945
129 Ga0466959_0032787 3300045049 Bacteria 3845
130 Ga0466959_0104742 3300045049 Bacteria 2023
131 Ga0466967_0600003 3300045976 Bacteria 1087
132 Ga0495629_0276373 3300046459 Bacteria 1153
133 Ga0495586_0284242 3300046535 Bacteria 947
134 Ga0495674_0190129 3300047319 Bacteria 1707
135 Ga0496100_0003625 3300048903 Bacteria 8065
136 Ga0496100_0178791 3300048903 Bacteria 1533
137 Ga0496102_0001696 3300048905 Bacteria 19325
138 Ga0496102_0300419 3300048905 Bacteria 1513
139 Ga0496104_0006407 3300048907 Bacteria 10352
140 Ga0496104_0031740 3300048907 Bacteria 4914
141 Ga0496104_0047550 3300048907 Bacteria 4043
142 Ga0496105_0002278 3300048908 Bacteria 13922
143 Ga0496105_0093413 3300048908 Bacteria 2484
144 Ga0496105_0164104 3300048908 Bacteria 1823
145 Ga0496106_0004480 3300048909 Bacteria 10359
146 Ga0496107_0003453 3300048910 Bacteria 10559
147 Ga0496108_0000479 3300048911 Bacteria 32030
148 Ga0496108_0060211 3300048911 Bacteria 3194
149 Ga0496108_0173935 3300048911 Bacteria 1863
150 Ga0496108_0322087 3300048911 Bacteria 1348
151 Ga0496109_0003408 3300048912 Bacteria 13299
152 Ga0496109_0003909 3300048912 Bacteria 12447
153 Ga0496109_0195527 3300048912 Bacteria 1901
154 Ga0496110_0006673 3300048913 Bacteria 9169
155 Ga0496110_0008732 3300048913 Bacteria 8160
156 Ga0496110_0065041 3300048913 Bacteria 3224
157 Ga0496110_0166174 3300048913 Bacteria 2001
158 Ga0496111_0003748 3300048914 Bacteria 9469
159 Ga0496111_0044377 3300048914 Bacteria 3195
160 Ga0496111_0142614 3300048914 Bacteria 1775
161 Ga0496112_0007154 3300048915 Bacteria 9880
162 Ga0496112_0012653 3300048915 Bacteria 7757
163 Ga0496112_0044093 3300048915 Bacteria 4369
164 Ga0496113_0058903 3300048916 Bacteria 2891
165 Ga0496113_0065498 3300048916 Bacteria 2750
166 Ga0496114_0170980 3300048917 Bacteria 1894
167 Ga0496114_0208777 3300048917 Bacteria 1712
168 Ga0496115_0009683 3300048918 Bacteria 7171
169 Ga0496115_0013248 3300048918 Bacteria 6231
170 Ga0496115_0118543 3300048918 Bacteria 2177
171 Ga0496117_0068709 3300048920 Bacteria 2390
172 Ga0496121_0237540 3300048924 Bacteria 1272
173 Ga0501033_0015364 3300049570 Bacteria 5809
174 Ga0501033_0097848 3300049570 Bacteria 2143
175 Ga0501034_0061344 3300049571 Bacteria 3776
176 Ga0501034_0066957 3300049571 Bacteria 3605
177 Ga0501034_0112918 3300049571 Bacteria 2707
178 Ga0501038_0377075 3300049574 Bacteria 1101
179 Ga0501043_0034449 3300049579 Bacteria 3982
180 Ga0501047_0042961 3300049581 Bacteria 4367
181 Ga0501069_0031497 3300049585 Bacteria 2917
182 Ga0501070_0229957 3300049586 Bacteria 1519
183 Ga0501071_0231163 3300049587 Bacteria 1393
184 Ga0501072_0037043 3300049588 Bacteria 3826
185 Ga0501074_0094696 3300049590 Bacteria 2138
186 Ga0501075_0226867 3300049591 Bacteria 1425
187 Ga0501080_0076829 3300049742 Bacteria 3105
188 Ga0501080_0106104 3300049742 Bacteria 2604
189 Ga0501083_0071722 3300049744 Bacteria 2303
190 Ga0501035_0106106 3300049822 Bacteria 2463
191 Ga0501044_0058030 3300049823 Bacteria 3970
192 Ga0501044_0150493 3300049823 Bacteria 2310
193 Ga0501044_0213051 3300049823 Bacteria 1885
194 nmdc:mga05p37_2462_c1 3300050507 Bacteria 21532
195 nmdc:mga09592_1563_c1 3300050508 Bacteria 18432
196 nmdc:mga0qj67_45292_c1 3300050509 Bacteria 3471
197 nmdc:mga0qj67_467487_c1 3300050509 Bacteria 1015
198 nmdc:mga0qj67_57796_c1 3300050509 Bacteria 3075
199 nmdc:mga06r32_266042_c1 3300050510 Bacteria 1702
200 nmdc:mga06r32_415930_c1 3300050510 Bacteria 1326
201 nmdc:mga06r32_770_c1 3300050510 Bacteria 28278
202 nmdc:mga08y16_72_c1 3300050511 Bacteria 84439
203 Ga0501082_0294020 3300060353 Bacteria 1414

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009098 Ga0105245_10562965 Ga0105245_105629652 254
2 3300005340 Ga0070689_100177882 Ga0070689_1001778821 258
3 3300005343 Ga0070687_100033636 Ga0070687_1000336362 258
4 3300025918 Ga0207662_10037929 Ga0207662_100379292 258
5 3300025936 Ga0207670_10008226 Ga0207670_100082263 258
6 3300005985 Ga0081539_10011677 Ga0081539_100116777 259
7 3300031250 Ga0265331_10005664 Ga0265331_100056644 264
8 3300031251 Ga0265327_10042445 Ga0265327_100424453 264
9 3300031344 Ga0265316_10023103 Ga0265316_100231034 266
10 3300035692 Ga0373935_0085162 Ga0373935_0085162_666_1511 266
11 3300035725 Ga0373947_0062175 Ga0373947_0062175_1096_1941 266
12 3300037068 Ga0373925_0028589 Ga0373925_0028589_1378_2223 266
13 3300009093 Ga0105240_10128061 Ga0105240_101280613 267
14 3300010375 Ga0105239_10492926 Ga0105239_104929261 267
15 3300048911 Ga0496108_0322087 Ga0496108_0322087_436_1248 267
16 3300048913 Ga0496110_0166174 Ga0496110_0166174_693_1505 267
17 3300048918 Ga0496115_0013248 Ga0496115_0013248_2075_2887 267
18 3300013297 Ga0157378_10140602 Ga0157378_101406022 270
19 3300037853 Ga0436364_0392825 Ga0436364_0392825_2127_3029 270
20 3300048912 Ga0496109_0195527 Ga0496109_0195527_518_1369 270
21 3300048920 Ga0496117_0068709 Ga0496117_0068709_940_1758 270
22 3300049570 Ga0501033_0097848 Ga0501033_0097848_992_1813 270
23 3300049574 Ga0501038_0377075 Ga0501038_0377075_166_987 270
24 3300049579 Ga0501043_0034449 Ga0501043_0034449_925_1746 270
25 3300049581 Ga0501047_0042961 Ga0501047_0042961_2188_3009 270
26 3300049822 Ga0501035_0106106 Ga0501035_0106106_42_863 270
27 3300049823 Ga0501044_0058030 Ga0501044_0058030_1276_2097 270
28 3300048903 Ga0496100_0178791 Ga0496100_0178791_443_1315 272
29 3300048905 Ga0496102_0300419 Ga0496102_0300419_219_1091 272
30 3300048907 Ga0496104_0047550 Ga0496104_0047550_820_1692 272
31 3300048908 Ga0496105_0002278 Ga0496105_0002278_9392_10264 272
32 3300048911 Ga0496108_0000479 Ga0496108_0000479_27003_27875 272
33 3300048912 Ga0496109_0003408 Ga0496109_0003408_3279_4151 272
34 3300048914 Ga0496111_0142614 Ga0496111_0142614_422_1294 272
35 3300048915 Ga0496112_0012653 Ga0496112_0012653_5912_6784 272
36 3300048916 Ga0496113_0058903 Ga0496113_0058903_1481_2353 272
37 3300048917 Ga0496114_0208777 Ga0496114_0208777_706_1578 272
38 3300048918 Ga0496115_0009683 Ga0496115_0009683_2748_3620 272
39 3300037068 Ga0373925_0319528 Ga0373925_0319528_394_1230 273
40 3300039437 Ga0436365_1363267 Ga0436365_1363267_1152_1997 273
41 iso_pu_bacteria 2891088606 2891089513 273
42 3300025913 Ga0207695_10325411 Ga0207695_103254112 274
43 3300025924 Ga0207694_10275611 Ga0207694_102756112 274
44 3300045049 Ga0466959_0032787 Ga0466959_0032787_72_920 274
45 iso_pu_bacteria 2513237087 2513590633 274
46 iso_pu_bacteria 2545555834 2545676416 274
47 iso_pu_bacteria 2728368998 2728748306 274
48 iso_pu_bacteria 2828305725 2828306447 274
49 iso_pu_bacteria 641522639 641641397 274
50 iso_pu_bacteria 643348564 643598498 274
51 3300048907 Ga0496104_0031740 Ga0496104_0031740_3930_4847 275
52 3300048908 Ga0496105_0164104 Ga0496105_0164104_508_1425 275
53 3300048918 Ga0496115_0118543 Ga0496115_0118543_1144_2061 275
54 iso_pu_bacteria 2888378607 2888387260 275
55 iso_pu_bacteria 2935608549 2935613167 275
56 iso_pu_bacteria 2935819856 2935824981 275
57 iso_pu_bacteria 2935847175 2935852200 275
58 iso_pu_bacteria 3005710791 3005717520 275
59 3300005841 Ga0068863_100117254 Ga0068863_1001172541 276
60 3300005983 Ga0081540_1002834 Ga0081540_100283410 276
61 3300031239 Ga0265328_10000668 Ga0265328_1000066818 276
62 3300031242 Ga0265329_10012011 Ga0265329_100120114 276
63 3300031250 Ga0265331_10001693 Ga0265331_100016934 276
64 3300031344 Ga0265316_10004443 Ga0265316_100044434 276
65 3300035170 Ga0373943_0100785 Ga0373943_0100785_15_929 276
66 3300035170 Ga0373943_0171042 Ga0373943_0171042_67_930 276
67 3300035692 Ga0373935_0005926 Ga0373935_0005926_4893_5807 276
68 3300035695 Ga0373927_0015144 Ga0373927_0015144_2033_2896 276
69 3300035695 Ga0373927_0058072 Ga0373927_0058072_132_1046 276
70 3300035725 Ga0373947_0433458 Ga0373947_0433458_16_879 276
71 3300037068 Ga0373925_0043417 Ga0373925_0043417_1104_1976 276
72 3300045976 Ga0466967_0600003 Ga0466967_0600003_212_1042 276
73 3300046535 Ga0495586_0284242 Ga0495586_0284242_43_906 276
74 3300047319 Ga0495674_0190129 Ga0495674_0190129_686_1600 276
75 3300049591 Ga0501075_0226867 Ga0501075_0226867_370_1233 276
76 3300035691 Ga0373931_0034400 Ga0373931_0034400_146_1003 277
77 3300049744 Ga0501083_0071722 Ga0501083_0071722_1259_2146 277
78 3300005937 Ga0081455_10005356 Ga0081455_100053561 278
79 3300010159 Ga0099796_10001206 Ga0099796_100012065 278
80 3300027512 Ga0209179_1020112 Ga0209179_10201121 278
81 3300028379 Ga0268266_10138369 Ga0268266_101383692 278
82 3300031616 Ga0307508_10204001 Ga0307508_102040011 278
83 3300005331 Ga0070670_100227614 Ga0070670_1002276142 279
84 3300005355 Ga0070671_100234174 Ga0070671_1002341742 279
85 3300005364 Ga0070673_100175993 Ga0070673_1001759932 279
86 3300005367 Ga0070667_100291089 Ga0070667_1002910892 279
87 3300005844 Ga0068862_100247772 Ga0068862_1002477722 279
88 3300006038 Ga0075365_10035613 Ga0075365_100356132 279
89 3300006048 Ga0075363_100035704 Ga0075363_1000357042 279
90 3300006178 Ga0075367_10030194 Ga0075367_100301942 279
91 3300006186 Ga0075369_10023149 Ga0075369_100231492 279
92 3300006195 Ga0075366_10113584 Ga0075366_101135842 279
93 3300006353 Ga0075370_10018975 Ga0075370_100189753 279
94 3300009174 Ga0105241_10358218 Ga0105241_103582181 279
95 3300009177 Ga0105248_10069005 Ga0105248_100690054 279
96 3300011119 Ga0105246_10034364 Ga0105246_100343642 279
97 3300021384 Ga0213876_10062521 Ga0213876_100625212 279
98 3300025904 Ga0207647_10096766 Ga0207647_100967662 279
99 3300025923 Ga0207681_10064182 Ga0207681_100641822 279
100 3300025925 Ga0207650_10212018 Ga0207650_102120182 279
101 3300025941 Ga0207711_10030704 Ga0207711_100307042 279
102 3300025981 Ga0207640_10150544 Ga0207640_101505442 279
103 3300031235 Ga0265330_10020426 Ga0265330_100204263 279
104 3300031250 Ga0265331_10005916 Ga0265331_100059164 279
105 3300031711 Ga0265314_10011879 Ga0265314_100118796 279
106 3300037312 Ga0395899_0083513 Ga0395899_0083513_88_927 279
107 3300037418 Ga0395900_0008452 Ga0395900_0008452_8074_8913 279
108 3300037466 Ga0395898_0021942 Ga0395898_0021942_2023_2862 279
109 3300038443 Ga0395901_0006170 Ga0395901_0006170_7932_8771 279
110 3300039437 Ga0436365_0697984 Ga0436365_0697984_1358_2263 279
111 3300044694 Ga0466963_0125551 Ga0466963_0125551_176_1015 279
112 3300044719 Ga0466971_0110646 Ga0466971_0110646_326_1225 279
113 3300046459 Ga0495629_0276373 Ga0495629_0276373_22_1062 279
114 3300048911 Ga0496108_0173935 Ga0496108_0173935_75_923 279
115 3300048924 Ga0496121_0237540 Ga0496121_0237540_290_1138 279
116 3300049570 Ga0501033_0015364 Ga0501033_0015364_2126_3067 279
117 3300049587 Ga0501071_0231163 Ga0501071_0231163_367_1368 279
118 3300049823 Ga0501044_0150493 Ga0501044_0150493_413_1354 279
119 iso_pu_bacteria 2513237095 2513649194 279
120 iso_pu_bacteria 2816332527 2818240581 279
121 iso_pu_bacteria 2936055302 2936055392 279
122 iso_pu_bacteria 8016630954 8016636825 279
123 iso_pu_bacteria 8019619141 8019623790 279
124 iso_pu_bacteria 8019629233 8019638248 279
125 iso_pu_bacteria 8019638758 8019641391 279
126 iso_pu_bacteria 8019687851 8019695394 279
127 3300006880 Ga0075429_100216034 Ga0075429_1002160342 280
128 3300025936 Ga0207670_10093465 Ga0207670_100934652 280
129 3300031239 Ga0265328_10000748 Ga0265328_100007487 280
130 3300035241 Ga0373961_0015321 Ga0373961_0015321_926_1792 280
131 3300044693 Ga0466961_0126389 Ga0466961_0126389_653_1495 280
132 3300044694 Ga0466963_0065933 Ga0466963_0065933_119_961 280
133 3300044842 Ga0466957_0087755 Ga0466957_0087755_857_1699 280
134 3300045049 Ga0466959_0104742 Ga0466959_0104742_35_877 280
135 3300048903 Ga0496100_0003625 Ga0496100_0003625_599_1468 280
136 3300048905 Ga0496102_0001696 Ga0496102_0001696_13336_14205 280
137 3300048907 Ga0496104_0006407 Ga0496104_0006407_8161_9030 280
138 3300048908 Ga0496105_0093413 Ga0496105_0093413_629_1498 280
139 3300048910 Ga0496107_0003453 Ga0496107_0003453_4340_5209 280
140 3300048913 Ga0496110_0008732 Ga0496110_0008732_2479_3348 280
141 3300048913 Ga0496110_0065041 Ga0496110_0065041_1031_1882 280
142 3300048914 Ga0496111_0003748 Ga0496111_0003748_1550_2419 280
143 3300048915 Ga0496112_0007154 Ga0496112_0007154_7270_8139 280
144 3300048916 Ga0496113_0065498 Ga0496113_0065498_1457_2326 280
145 3300048917 Ga0496114_0170980 Ga0496114_0170980_472_1341 280
146 3300049571 Ga0501034_0066957 Ga0501034_0066957_1302_2168 280
147 3300049823 Ga0501044_0213051 Ga0501044_0213051_515_1381 280
148 3300050509 nmdc:mga0qj67_57796_c1 nmdc:mga0qj67_57796_c1_868_1863 280
149 3300050510 nmdc:mga06r32_266042_c1 nmdc:mga06r32_266042_c1_452_1447 280
150 3300005329 Ga0070683_100032771 Ga0070683_1000327712 281
151 3300005336 Ga0070680_100096111 Ga0070680_1000961112 281
152 3300005435 Ga0070714_100059337 Ga0070714_1000593374 281
153 3300005437 Ga0070710_10053148 Ga0070710_100531482 281
154 3300005458 Ga0070681_10231241 Ga0070681_102312412 281
155 3300005458 Ga0070681_10263887 Ga0070681_102638871 281
156 3300005530 Ga0070679_100026568 Ga0070679_1000265686 281
157 3300005539 Ga0068853_100089343 Ga0068853_1000893433 281
158 3300005563 Ga0068855_100094887 Ga0068855_1000948873 281
159 3300005578 Ga0068854_100036832 Ga0068854_1000368322 281
160 3300005841 Ga0068863_100317531 Ga0068863_1003175312 281
161 3300005937 Ga0081455_10008306 Ga0081455_100083063 281
162 3300006847 Ga0075431_100006206 Ga0075431_1000062069 281
163 3300006847 Ga0075431_100035842 Ga0075431_1000358422 281
164 3300006880 Ga0075429_100004721 Ga0075429_1000047219 281
165 3300006880 Ga0075429_100227618 Ga0075429_1002276182 281
166 3300009093 Ga0105240_10094443 Ga0105240_100944433 281
167 3300009094 Ga0111539_10000115 Ga0111539_1000011583 281
168 3300009147 Ga0114129_10001209 Ga0114129_1000120926 281
169 3300009147 Ga0114129_10276703 Ga0114129_102767032 281
170 3300009551 Ga0105238_10015798 Ga0105238_100157986 281
171 3300013100 Ga0157373_10076086 Ga0157373_100760861 281
172 3300013104 Ga0157370_10248719 Ga0157370_102487191 281
173 3300013105 Ga0157369_10130340 Ga0157369_101303402 281
174 3300013307 Ga0157372_10236625 Ga0157372_102366252 281
175 3300021377 Ga0213874_10008970 Ga0213874_100089701 281
176 3300021377 Ga0213874_10035485 Ga0213874_100354852 281
177 3300021384 Ga0213876_10036155 Ga0213876_100361551 281
178 3300025898 Ga0207692_10022583 Ga0207692_100225832 281
179 3300025906 Ga0207699_10156233 Ga0207699_101562332 281
180 3300025912 Ga0207707_10276134 Ga0207707_102761342 281
181 3300025917 Ga0207660_10181945 Ga0207660_101819452 281
182 3300025921 Ga0207652_10052592 Ga0207652_100525921 281
183 3300025939 Ga0207665_10099559 Ga0207665_100995592 281
184 3300026088 Ga0207641_10329128 Ga0207641_103291282 281
185 3300027907 Ga0207428_10002405 Ga0207428_1000240519 281
186 3300031242 Ga0265329_10069893 Ga0265329_100698931 281
187 3300031247 Ga0265340_10012463 Ga0265340_100124632 281
188 3300031344 Ga0265316_10130629 Ga0265316_101306292 281
189 3300031712 Ga0265342_10000963 Ga0265342_100009632 281
190 3300037418 Ga0395900_0003102 Ga0395900_0003102_4639_5484 281
191 3300037418 Ga0395900_0199919 Ga0395900_0199919_410_1336 281
192 3300037418 Ga0395900_0248977 Ga0395900_0248977_737_1582 281
193 3300037466 Ga0395898_0017292 Ga0395898_0017292_2572_3417 281
194 3300037466 Ga0395898_0066433 Ga0395898_0066433_1053_1979 281
195 3300037466 Ga0395898_0507087 Ga0395898_0507087_14_859 281
196 3300038443 Ga0395901_0029783 Ga0395901_0029783_318_1244 281
197 3300038443 Ga0395901_0081069 Ga0395901_0081069_243_1088 281
198 3300039437 Ga0436365_0199567 Ga0436365_0199567_124_1023 281
199 3300039437 Ga0436365_0396709 Ga0436365_0396709_2466_3365 281
200 3300039450 Ga0436363_0740852 Ga0436363_0740852_4399_5298 281
201 3300039450 Ga0436363_1223973 Ga0436363_1223973_2989_3888 281
202 3300048909 Ga0496106_0004480 Ga0496106_0004480_5683_6561 281
203 3300048911 Ga0496108_0060211 Ga0496108_0060211_1758_2759 281
204 3300048912 Ga0496109_0003909 Ga0496109_0003909_4753_5631 281
205 3300048913 Ga0496110_0006673 Ga0496110_0006673_680_1681 281
206 3300048914 Ga0496111_0044377 Ga0496111_0044377_1698_2699 281
207 3300048915 Ga0496112_0044093 Ga0496112_0044093_2450_3451 281
208 3300049571 Ga0501034_0061344 Ga0501034_0061344_952_1800 281
209 3300049571 Ga0501034_0112918 Ga0501034_0112918_1214_2059 281
210 3300049585 Ga0501069_0031497 Ga0501069_0031497_1999_2844 281
211 3300049586 Ga0501070_0229957 Ga0501070_0229957_494_1339 281
212 3300049588 Ga0501072_0037043 Ga0501072_0037043_2393_3238 281
213 3300049590 Ga0501074_0094696 Ga0501074_0094696_1211_2056 281
214 3300049742 Ga0501080_0076829 Ga0501080_0076829_652_1497 281
215 3300049742 Ga0501080_0106104 Ga0501080_0106104_930_1790 281
216 3300050507 nmdc:mga05p37_2462_c1 nmdc:mga05p37_2462_c1_7483_8355 281
217 3300050508 nmdc:mga09592_1563_c1 nmdc:mga09592_1563_c1_10010_10882 281
218 3300050509 nmdc:mga0qj67_45292_c1 nmdc:mga0qj67_45292_c1_680_1552 281
219 3300050509 nmdc:mga0qj67_467487_c1 nmdc:mga0qj67_467487_c1_44_916 281
220 3300050510 nmdc:mga06r32_415930_c1 nmdc:mga06r32_415930_c1_185_1057 281
221 3300050510 nmdc:mga06r32_770_c1 nmdc:mga06r32_770_c1_13621_14493 281
222 3300050511 nmdc:mga08y16_72_c1 nmdc:mga08y16_72_c1_10430_11302 281
223 3300060353 Ga0501082_0294020 Ga0501082_0294020_180_1040 281

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01817

CM_2

Chorismate mutase type II

55

134

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7b90-assembly1.cif.gz_E circular permutant of ribosomal protein s6, p54-55 truncated, i8a mutant 0.7218 198 268
3ctr-assembly1.cif.gz_A crystal structure of the rrm-domain of the poly(a)-specific ribonuclease parn bound to m7gtp 0.7161 199 242
7f2r-assembly2.cif.gz_C crystal structure of vink-vinl covalent complex formed with a pantetheineamide cross-linking probe 0.7117 202 264
8h6s-assembly2.cif.gz_B structure of acyltransferase vink in complex with the loading acyl carrier protein of vicenistatin pks 0.7045 202 264
7bfg-assembly1.cif.gz_I circular permutant of ribosomal protein s6, p54-55 truncated, v37a mutant. 0.7016 198 268
ID Description Score Start End Superfamily
3ctrA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain 0.7161 199 242 3.30.70.330
af_Q58011_167_239_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.6982 199 269 3.30.70.240
2wbmB03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.6973 199 263 3.30.70.240
af_I1KX21_169_303_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.6862 196 257 2.60.120.260
af_Q2FY78_132_218_3.30.70.1560 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Alpha-L RNA-binding motif 0.6845 200 266 3.30.70.1560
ID Description Score Start End GO Terms
AF-A0A537TUC4-F1-model_v4 Uncharacterized protein 0.9816 107 281
AF-A0A537N625-F1-model_v4 Uncharacterized protein 0.9666 85 276
AF-A0A259IU04-F1-model_v4 Uncharacterized protein 0.9535 59 281
AF-A0A537TUC4-F1-model_v4 Uncharacterized protein 0.9494 107 281
AF-A0A537N625-F1-model_v4 Uncharacterized protein 0.9471 85 276

Feature Viewer

pLDDT pTM Quality
86.72 0.85 High
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Predicted Structure (AlphaFold2)

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