F335127

General Info

Members Datasets Scaffolds Average Seq Length
223 192 161 478

Family's Representative Sequence

Representative Sequence 3300002772|JGI25164J39214_1000715|JGI25164J39214_10007159
Length 528
Sequence MSVAVATLEPVTENTPPAPEALADPAFDDLAVAGSAADVSTGGTAGAGVAAAPDHTKRNNRVIWLLLSATFVVILNETIMSVAIPKLMDDLRIDALAAQWLSTAFMLTMAVVIPITGFLLQRFSTRSIFIAAMSLFSLGTLSAALAPGFGLLVVARVIQASGTAIMIPLLMTTLMTLVPPNKRGRTMGNVSIVISVAPAIGPTISGFILNYLDWRWIFLIVLPIAVVMLLIGIKFVENVTDPQKVKVDVLSVILSAFGFGGLLYGLSQTGASGPGSSPAVMWVSLAVGVVALTAFILRQLVLQRRDSALLDLRTFRSPIFTVSIALMAISTAAMFGVIIVLPLYLQHVLGLDTLATGLLLLPGGLVMGLLAPFVGRIYDRFGPRVLVVPGAILVSLALWGFTLITEHTSQYLVLAGHVTLSIGLALMFTPLFTAGLGAVPPNLYSHGSAIVGTVQQVAGAAGTALLIAIMSAHTASLVSAGTSIVPATAGGIRMAFLAAAIISLFAVVGAFFIRKPADVIAPEGHVAH

Samples

Sample ID Description Type Environment
1 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
2 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
3 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
4 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
5 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
6 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
7 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
8 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
9 2643221549 Agromyces sp. Root1464 Isolate Unclassified
10 2643221572 Leifsonia sp. Root60 Isolate Unclassified
11 2643221616 Leifsonia sp. Root227 Isolate Unclassified
12 2643221619 Agromyces sp. Root81 Isolate Unclassified
13 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
14 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
15 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
16 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
17 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
18 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
19 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
20 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
21 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
22 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
23 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
24 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
25 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
26 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
27 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
28 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
29 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
30 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
31 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
32 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
33 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
34 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
35 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
36 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
37 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
38 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
39 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
40 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
41 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
42 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
43 2928153084 Leifsonia sp. 563 Isolate Unclassified
44 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
45 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
46 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
47 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
48 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
49 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
50 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
51 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
52 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
53 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
54 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
55 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
56 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
57 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
58 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
59 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
60 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
61 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
62 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
63 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
64 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
65 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
66 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
67 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
68 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
69 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
70 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
71 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
72 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
73 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
74 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
75 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
76 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
77 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
78 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
79 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
80 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
81 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
82 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
87 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
93 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
97 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
98 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
101 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
102 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
104 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
106 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
116 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
123 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
124 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
125 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
126 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
129 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
130 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
131 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
132 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
133 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
134 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
135 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
136 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
137 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
138 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
144 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
145 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
148 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
151 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
152 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
153 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
154 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
158 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
159 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
160 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
161 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
164 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
175 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
176 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
177 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
178 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
179 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
180 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
181 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
182 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
183 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
186 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
187 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
188 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
189 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
190 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
191 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
192 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 72.2
Metatranscriptomes 0
Isolates 27.8

Biome Distribution

Category Percentage (%)
Aerial Root 1.35
Bulb 0
Endosphere 29.6
Nodule 3.14
Rhizoplane 3.59
Rhizosphere 46.19
Stem 0
Stem Tuber 0.45
Unclassified 15.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1000024 3300002739 Bacteria 35027
2 JGI25164J39214_1000715 3300002772 Bacteria 12633
3 JGI25152J39213_1000540 3300002773 Bacteria 20859
4 JGI25152J39213_1001107 3300002773 Bacteria 12599
5 JGI25152J39213_1002040 3300002773 Bacteria 7967
6 JGI25159J45721_1005790 3300002987 Bacteria 3819
7 JGI25151J46595_10014355 3300003187 Bacteria 3531
8 JGI25165J46597_1000004 3300003214 Bacteria 667510
9 JGI25153J46596_10000618 3300003215 Bacteria 21719
10 JGI25153J46596_10001833 3300003215 Bacteria 12607
11 JGI25153J46596_10004191 3300003215 Bacteria 7820
12 JGI25161J50226_1000207 3300003374 Bacteria 38350
13 Ga0055539_1000005 3300003752 Bacteria 609598
14 Ga0055533_1000001 3300003756 Bacteria 1863437
15 Ga0055525_1000448 3300003759 Bacteria 23663
16 Ga0055527_1000001 3300003760 Bacteria 850044
17 Ga0055529_1000019 3300003763 Bacteria 332786
18 Ga0055526_1000707 3300003771 Bacteria 25281
19 Ga0055528_1002170 3300003790 Bacteria 10760
20 Ga0055540_1001245 3300003792 Bacteria 15636
21 Ga0055541_1007556 3300003841 Bacteria 1777
22 Ga0055543_1000053 3300004625 Bacteria 104589
23 Ga0070658_10020558 3300005327 Bacteria 5292
24 Ga0070658_10073507 3300005327 Bacteria 2803
25 Ga0070660_100008335 3300005339 Bacteria 7245
26 Ga0070667_100044542 3300005367 Bacteria 3727
27 Ga0070663_100007448 3300005455 Bacteria 6659
28 Ga0070681_10078923 3300005458 Bacteria 3249
29 Ga0068855_100026285 3300005563 Bacteria 6964
30 Ga0081539_10000262 3300005985 Bacteria 121044
31 Ga0105243_10003110 3300009148 Bacteria 13646
32 Ga0157372_10076718 3300013307 Bacteria 3774
33 Ga0157380_10004308 3300014326 Bacteria 9867
34 Ga0163161_10122530 3300017792 Bacteria 1955
35 Ga0209436_100011 3300025208 Bacteria 139405
36 Ga0209566_100105 3300025225 Bacteria 125766
37 Ga0209674_100001 3300025226 Bacteria 4013750
38 Ga0209672_100006 3300025228 Bacteria 1004497
39 Ga0209672_103639 3300025228 Bacteria 3114
40 Ga0209563_100001 3300025230 Bacteria 4013775
41 Ga0209563_100404 3300025230 Bacteria 15438
42 Ga0207427_100010 3300025231 Bacteria 648610
43 Ga0209437_100433 3300025233 Bacteria 36518
44 Ga0209258_104336 3300025242 Bacteria 2720
45 Ga0209677_100001 3300025253 Bacteria 4013787
46 Ga0209677_101020 3300025253 Bacteria 13368
47 Ga0209148_1000015 3300025254 Bacteria 850103
48 Ga0209129_1000256 3300025258 Bacteria 55133
49 Ga0209129_1001429 3300025258 Bacteria 13345
50 Ga0209129_1002154 3300025258 Bacteria 9971
51 Ga0209233_1000001 3300025261 Bacteria 2992747
52 Ga0209455_1000013 3300025272 Bacteria 850103
53 Ga0209455_1000938 3300025272 Bacteria 14930
54 Ga0209673_1006082 3300025273 Bacteria 5921
55 Ga0209130_1000081 3300025284 Bacteria 166440
56 Ga0209025_1005874 3300025294 Bacteria 9811
57 Ga0209025_1007872 3300025294 Bacteria 7816
58 Ga0209564_1000260 3300025295 Bacteria 112444
59 Ga0209758_1001270 3300025297 Bacteria 31259
60 Ga0209758_1001487 3300025297 Bacteria 27386
61 Ga0209758_1006442 3300025297 Bacteria 8434
62 Ga0209256_1006142 3300025299 Bacteria 6501
63 Ga0207426_1000008 3300025302 Bacteria 848730
64 Ga0209051_1018996 3300025303 Bacteria 3018
65 Ga0207705_10000817 3300025909 Bacteria 25483
66 Ga0207705_10128637 3300025909 Bacteria 1883
67 Ga0207657_10001154 3300025919 Bacteria 28104
68 Ga0207709_10024705 3300025935 Bacteria 3434
69 Ga0207667_10005048 3300025949 Bacteria 16121
70 Ga0207658_10016577 3300025986 Bacteria 5071
71 Ga0207678_10016555 3300026067 Bacteria 6474
72 Ga0207702_10206089 3300026078 Bacteria 1826
73 Ga0307515_10059248 3300028794 Bacteria 5491
74 Ga0307513_10041238 3300031456 Bacteria 5098
75 Ga0307412_10014585 3300031911 Bacteria 4639
76 Ga0307411_10041746 3300032005 Bacteria 2922
77 Ga0395898_0000015 3300037466 Bacteria 439819
78 Ga0395905_0051740 3300037471 Bacteria 3847
79 Ga0451853_0797206 3300041512 Bacteria 1785
80 Ga0466972_0034857 3300044658 Bacteria 2464
81 Ga0466965_0054094 3300044683 Bacteria 1995
82 Ga0466966_0046562 3300044684 Bacteria 2768
83 Ga0466966_0053087 3300044684 Bacteria 2572
84 Ga0466963_0003210 3300044694 Bacteria 9299
85 Ga0466970_0009404 3300044765 Bacteria 4940
86 Ga0466957_0007776 3300044842 Bacteria 6069
87 Ga0466957_0025526 3300044842 Bacteria 3503
88 Ga0466959_0127034 3300045049 Bacteria 1809
89 Ga0495590_0032204 3300046457 Bacteria 1834
90 Ga0495653_0033953 3300046463 Bacteria 4038
91 Ga0495662_0001651 3300046476 Bacteria 11108
92 Ga0495662_0020922 3300046476 Bacteria 3164
93 Ga0495664_0005401 3300046477 Bacteria 7016
94 Ga0495594_0043958 3300046499 Bacteria 2450
95 Ga0495583_0013160 3300046506 Bacteria 4633
96 Ga0495630_0074433 3300046517 Bacteria 2558
97 Ga0495631_0001801 3300046518 Bacteria 12671
98 Ga0495632_0014588 3300046519 Bacteria 4439
99 Ga0495645_0002960 3300046543 Bacteria 11499
100 Ga0495667_0006884 3300046559 Bacteria 7721
101 Ga0495668_0002211 3300046616 Bacteria 16566
102 Ga0495625_0004374 3300046660 Bacteria 13401
103 Ga0495635_0078610 3300046663 Bacteria 2258
104 Ga0495623_0068828 3300046679 Bacteria 2207
105 Ga0495613_0119880 3300046689 Bacteria 1890
106 Ga0495670_0022488 3300046691 Bacteria 3113
107 Ga0495671_0009719 3300046692 Bacteria 5363
108 Ga0495600_0054713 3300046809 Bacteria 2606
109 Ga0495581_0023576 3300047315 Bacteria 3565
110 Ga0495604_0030564 3300047317 Bacteria 4277
111 Ga0495604_0088206 3300047317 Bacteria 2308
112 Ga0495680_0031857 3300047322 Bacteria 4286
113 Ga0495675_0061934 3300047444 Bacteria 2369
114 Ga0496100_0059177 3300048903 Bacteria 2516
115 Ga0496101_0037757 3300048904 Bacteria 3428
116 Ga0496102_0114518 3300048905 Bacteria 2516
117 Ga0496102_0161583 3300048905 Bacteria 2107
118 Ga0496105_0148906 3300048908 Bacteria 1924
119 Ga0496106_0000038 3300048909 Bacteria 111983
120 Ga0496115_0074346 3300048918 Bacteria 2759
121 Ga0496117_0001880 3300048920 Bacteria 28246
122 Ga0496117_0008977 3300048920 Bacteria 9409
123 Ga0496117_0027034 3300048920 Bacteria 4477
124 Ga0496118_0026379 3300048921 Bacteria 4952
125 Ga0496119_0019396 3300048922 Bacteria 5011
126 Ga0496121_0013224 3300048924 Bacteria 8893
127 Ga0496122_0000956 3300048925 Bacteria 52168
128 Ga0496122_0011020 3300048925 Bacteria 9237
129 Ga0496125_0000079 3300048928 Bacteria 230066
130 Ga0496125_0019988 3300048928 Bacteria 6296
131 Ga0495682_0008321 3300049460 Bacteria 4091
132 Ga0501032_0030161 3300049569 Bacteria 3720
133 Ga0501033_0036822 3300049570 Bacteria 3664
134 Ga0501036_0043717 3300049572 Bacteria 3794
135 Ga0501043_0029239 3300049579 Bacteria 4328
136 Ga0501043_0156375 3300049579 Bacteria 1783
137 Ga0501046_0194418 3300049580 Bacteria 1512
138 Ga0501047_0005023 3300049581 Bacteria 12422
139 Ga0501047_0063852 3300049581 Bacteria 3552
140 Ga0501047_0169198 3300049581 Bacteria 2054
141 Ga0501047_0252869 3300049581 Bacteria 1610
142 Ga0501048_0011693 3300049582 Bacteria 6548
143 Ga0501070_0030235 3300049586 Bacteria 4539
144 Ga0501070_0063650 3300049586 Bacteria 3055
145 Ga0501071_0000388 3300049587 Bacteria 21660
146 Ga0501044_0045162 3300049823 Bacteria 4567
147 Ga0500610_0002901 3300053079 Bacteria 6450
148 Ga0500635_0000039 3300053080 Bacteria 93004
149 Ga0500556_0000161 3300053104 Bacteria 55014
150 Ga0500557_000710 3300053105 Bacteria 4694
151 Ga0500594_0000765 3300053118 Bacteria 6849
152 Ga0500658_0005628 3300053134 Bacteria 4663
153 Ga0500559_0000151 3300053136 Bacteria 54813
154 Ga0500559_0020598 3300053136 Bacteria 2789
155 Ga0500568_0000113 3300053139 Bacteria 73458
156 Ga0500568_0000365 3300053139 Bacteria 35007
157 Ga0500573_0017687 3300053140 Bacteria 4060
158 Ga0500590_004817 3300053148 Bacteria 6434
159 Ga0500616_0000199 3300053153 Bacteria 97974
160 Ga0500622_0007586 3300053156 Bacteria 6145
161 Ga0466962_0014683 3300061719 Bacteria 3775

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048928 Ga0496125_0000079 Ga0496125_0000079_14686_16188 385
2 3300003760 Ga0055527_1000001 Ga0055527_1000001709 399
3 3300003763 Ga0055529_1000019 Ga0055529_1000019215 399
4 3300025228 Ga0209672_100006 Ga0209672_100006266 399
5 3300025242 Ga0209258_104336 Ga0209258_1043362 399
6 3300025254 Ga0209148_1000015 Ga0209148_1000015110 399
7 3300025272 Ga0209455_1000013 Ga0209455_1000013110 399
8 3300048903 Ga0496100_0059177 Ga0496100_0059177_125_1639 399
9 3300025909 Ga0207705_10128637 Ga0207705_101286372 400
10 3300048922 Ga0496119_0019396 Ga0496119_0019396_1847_3349 406
11 3300048925 Ga0496122_0000956 Ga0496122_0000956_6825_8327 406
12 3300046679 Ga0495623_0068828 Ga0495623_0068828_35_1420 407
13 3300046463 Ga0495653_0033953 Ga0495653_0033953_2630_4015 409
14 3300046476 Ga0495662_0001651 Ga0495662_0001651_7955_9340 409
15 3300046477 Ga0495664_0005401 Ga0495664_0005401_291_1676 409
16 3300046517 Ga0495630_0074433 Ga0495630_0074433_742_2127 409
17 3300046559 Ga0495667_0006884 Ga0495667_0006884_176_1561 409
18 3300046663 Ga0495635_0078610 Ga0495635_0078610_430_1815 409
19 3300046689 Ga0495613_0119880 Ga0495613_0119880_480_1865 409
20 3300046809 Ga0495600_0054713 Ga0495600_0054713_419_1804 409
21 3300047315 Ga0495581_0023576 Ga0495581_0023576_1501_2886 409
22 3300047317 Ga0495604_0088206 Ga0495604_0088206_685_2070 409
23 3300047322 Ga0495680_0031857 Ga0495680_0031857_2867_4252 409
24 3300047444 Ga0495675_0061934 Ga0495675_0061934_771_2156 409
25 3300017792 Ga0163161_10122530 Ga0163161_101225301 410
26 3300053080 Ga0500635_0000039 Ga0500635_0000039_5116_6633 419
27 3300013307 Ga0157372_10076718 Ga0157372_100767181 420
28 3300048904 Ga0496101_0037757 Ga0496101_0037757_705_2219 420
29 3300048905 Ga0496102_0114518 Ga0496102_0114518_16_1530 420
30 3300048908 Ga0496105_0148906 Ga0496105_0148906_180_1694 420
31 3300005985 Ga0081539_10000262 Ga0081539_10000262112 421
32 3300053136 Ga0500559_0020598 Ga0500559_0020598_1066_2559 421
33 3300026078 Ga0207702_10206089 Ga0207702_102060892 423
34 3300049581 Ga0501047_0252869 Ga0501047_0252869_181_1584 423
35 3300014326 Ga0157380_10004308 Ga0157380_1000430810 426
36 3300046499 Ga0495594_0043958 Ga0495594_0043958_785_2170 427
37 3300046543 Ga0495645_0002960 Ga0495645_0002960_9394_10779 427
38 3300049579 Ga0501043_0156375 Ga0501043_0156375_238_1719 427
39 3300049581 Ga0501047_0005023 Ga0501047_0005023_1345_2826 427
40 3300032005 Ga0307411_10041746 Ga0307411_100417462 428
41 3300049580 Ga0501046_0194418 Ga0501046_0194418_150_1499 432
42 3300005327 Ga0070658_10073507 Ga0070658_100735072 436
43 3300053140 Ga0500573_0017687 Ga0500573_0017687_1613_3001 438
44 3300048918 Ga0496115_0074346 Ga0496115_0074346_114_1622 439
45 3300053104 Ga0500556_0000161 Ga0500556_0000161_42014_43459 439
46 3300049586 Ga0501070_0063650 Ga0501070_0063650_1403_2938 442
47 3300037466 Ga0395898_0000015 Ga0395898_0000015_276095_277642 444
48 iso_pu_bacteria 8004021418 8004024516 446
49 iso_pu_bacteria 8004025490 8004025990 446
50 3300049570 Ga0501033_0036822 Ga0501033_0036822_1392_2873 448
51 3300025228 Ga0209672_103639 Ga0209672_1036392 449
52 3300044684 Ga0466966_0053087 Ga0466966_0053087_135_1610 449
53 3300044694 Ga0466963_0003210 Ga0466963_0003210_5841_7316 449
54 3300044842 Ga0466957_0007776 Ga0466957_0007776_1980_3455 449
55 3300048920 Ga0496117_0001880 Ga0496117_0001880_1139_2626 449
56 3300044658 Ga0466972_0034857 Ga0466972_0034857_162_1640 450
57 3300044765 Ga0466970_0009404 Ga0466970_0009404_904_2382 450
58 3300044842 Ga0466957_0025526 Ga0466957_0025526_452_1930 450
59 3300045049 Ga0466959_0127034 Ga0466959_0127034_67_1545 450
60 3300046457 Ga0495590_0032204 Ga0495590_0032204_403_1806 450
61 3300046692 Ga0495671_0009719 Ga0495671_0009719_2688_4133 450
62 3300003752 Ga0055539_1000005 Ga0055539_1000005154 452
63 3300003756 Ga0055533_1000001 Ga0055533_10000011223 452
64 3300003759 Ga0055525_1000448 Ga0055525_100044813 452
65 3300003841 Ga0055541_1007556 Ga0055541_10075562 452
66 3300005327 Ga0070658_10020558 Ga0070658_100205584 452
67 3300005339 Ga0070660_100008335 Ga0070660_1000083353 452
68 3300005455 Ga0070663_100007448 Ga0070663_1000074483 452
69 3300005458 Ga0070681_10078923 Ga0070681_100789233 452
70 3300005563 Ga0068855_100026285 Ga0068855_1000262856 452
71 3300025225 Ga0209566_100105 Ga0209566_100105114 452
72 3300025226 Ga0209674_100001 Ga0209674_1000011223 452
73 3300025230 Ga0209563_100001 Ga0209563_1000011223 452
74 3300025230 Ga0209563_100404 Ga0209563_1004049 452
75 3300025253 Ga0209677_100001 Ga0209677_1000011223 452
76 3300025253 Ga0209677_101020 Ga0209677_1010205 452
77 3300025909 Ga0207705_10000817 Ga0207705_1000081715 452
78 3300025919 Ga0207657_10001154 Ga0207657_1000115415 452
79 3300025949 Ga0207667_10005048 Ga0207667_100050487 452
80 3300026067 Ga0207678_10016555 Ga0207678_100165553 452
81 3300046476 Ga0495662_0020922 Ga0495662_0020922_230_1705 452
82 3300047317 Ga0495604_0030564 Ga0495604_0030564_1498_2973 452
83 3300048905 Ga0496102_0161583 Ga0496102_0161583_161_1645 455
84 3300048920 Ga0496117_0027034 Ga0496117_0027034_1528_3012 455
85 3300048921 Ga0496118_0026379 Ga0496118_0026379_2744_4228 455
86 3300025272 Ga0209455_1000938 Ga0209455_10009386 456
87 iso_pu_bacteria 2554235227 2555230235 456
88 iso_pu_bacteria 2654587600 2655031262 456
89 iso_pu_bacteria 2751185734 2753071672 456
90 iso_pu_bacteria 2870721527 2870722878 456
91 3300041512 Ga0451853_0797206 Ga0451853_0797206_155_1678 457
92 iso_pu_bacteria 2984592036 2984592761 457
93 3300005367 Ga0070667_100044542 Ga0070667_1000445423 458
94 3300025986 Ga0207658_10016577 Ga0207658_100165775 458
95 3300044683 Ga0466965_0054094 Ga0466965_0054094_160_1683 458
96 3300044684 Ga0466966_0046562 Ga0466966_0046562_744_2267 458
97 3300049572 Ga0501036_0043717 Ga0501036_0043717_518_1999 458
98 3300049579 Ga0501043_0029239 Ga0501043_0029239_888_2369 458
99 3300049581 Ga0501047_0169198 Ga0501047_0169198_368_1849 458
100 3300049582 Ga0501048_0011693 Ga0501048_0011693_522_2003 458
101 3300061719 Ga0466962_0014683 Ga0466962_0014683_1089_2612 458
102 iso_pu_bacteria 2643221697 2644539178 458
103 iso_pu_bacteria 2844852863 2844856329 458
104 iso_pu_bacteria 8056037122 8056037245 458
105 3300009148 Ga0105243_10003110 Ga0105243_100031103 459
106 iso_pu_bacteria 2974294766 2974297579 459
107 iso_pu_bacteria 2974324384 2974326185 459
108 3300053136 Ga0500559_0000151 Ga0500559_0000151_32208_33677 460
109 iso_pu_bacteria 2643221635 2644198262 461
110 iso_pu_bacteria 2844841374 2844842890 462
111 iso_pu_bacteria 2984576629 2984577834 462
112 iso_pu_bacteria 2990256926 2990260195 462
113 3300025935 Ga0207709_10024705 Ga0207709_100247052 463
114 3300049586 Ga0501070_0030235 Ga0501070_0030235_2391_3920 463
115 iso_pu_bacteria 2738543011 2739236146 463
116 iso_pu_bacteria 2889300758 2889304514 463
117 iso_pu_bacteria 2939743619 2939745088 463
118 iso_pu_bacteria 2643221690 2644506295 464
119 iso_pu_bacteria 2643221694 2644526290 464
120 iso_pu_bacteria 2643221722 2644670965 464
121 iso_pu_bacteria 2964326757 2964329221 464
122 3300049587 Ga0501071_0000388 Ga0501071_0000388_419_1933 465
123 iso_pu_bacteria 2928153084 2928156828 465
124 3300049823 Ga0501044_0045162 Ga0501044_0045162_1578_3050 466
125 iso_pu_bacteria 2816332139 2816508004 466
126 iso_pu_bacteria 2884994152 2884994214 466
127 iso_pu_bacteria 2919055335 2919058864 466
128 3300049569 Ga0501032_0030161 Ga0501032_0030161_353_1834 467
129 3300053148 Ga0500590_004817 Ga0500590_004817_470_1945 467
130 iso_pu_bacteria 2667528174 2671116640 467
131 iso_pu_bacteria 2939598168 2939600306 467
132 iso_pu_bacteria 2966921586 2966921750 467
133 3300028794 Ga0307515_10059248 Ga0307515_100592482 468
134 3300031456 Ga0307513_10041238 Ga0307513_100412384 468
135 iso_pu_bacteria 2515154113 2515634394 468
136 iso_pu_bacteria 2517287029 2517411883 468
137 iso_pu_bacteria 2643221572 2643875842 468
138 iso_pu_bacteria 2643221669 2644382897 468
139 iso_pu_bacteria 2862993130 2862995616 468
140 iso_pu_bacteria 2895660088 2895663645 468
141 iso_pu_bacteria 2919523602 2919524976 468
142 iso_pu_bacteria 8046352972 8046353369 468
143 3300031911 Ga0307412_10014585 Ga0307412_100145853 469
144 3300053156 Ga0500622_0007586 Ga0500622_0007586_3647_5110 469
145 iso_pu_bacteria 2870622029 2870624094 469
146 iso_pu_bacteria 2939657138 2939658581 469
147 iso_pu_bacteria 2939660829 2939661388 469
148 3300002773 JGI25152J39213_1002040 JGI25152J39213_10020402 470
149 3300003187 JGI25151J46595_10014355 JGI25151J46595_100143552 470
150 3300003215 JGI25153J46596_10004191 JGI25153J46596_100041912 470
151 iso_pu_bacteria 2643221632 2644182838 470
152 iso_pu_bacteria 2842357229 2842362142 470
153 iso_pu_bacteria 2842509118 2842512331 470
154 iso_pu_bacteria 2905926851 2905926863 470
155 3300025258 Ga0209129_1002154 Ga0209129_10021546 471
156 3300025294 Ga0209025_1007872 Ga0209025_10078722 471
157 3300025297 Ga0209758_1001487 Ga0209758_100148728 471
158 iso_pu_bacteria 2524023209 2524457002 471
159 iso_pu_bacteria 2582581315 2585328647 471
160 iso_pu_bacteria 2842298080 2842299447 471
161 iso_pu_bacteria 2852387548 2852394370 471
162 iso_pu_bacteria 8046767195 8046771240 471
163 iso_pu_bacteria 8057575449 8057578708 471
164 3300053134 Ga0500658_0005628 Ga0500658_0005628_1056_2540 472
165 iso_pu_bacteria 2946003308 2946004288 472
166 iso_pu_bacteria 3005445848 3005448232 472
167 3300002772 JGI25164J39214_1000715 JGI25164J39214_10007159 473
168 3300003214 JGI25165J46597_1000004 JGI25165J46597_1000004275 473
169 3300025231 Ga0207427_100010 Ga0207427_100010306 473
170 3300025233 Ga0209437_100433 Ga0209437_10043335 473
171 3300025261 Ga0209233_1000001 Ga0209233_10000011643 473
172 iso_pu_bacteria 2510917030 2511195998 473
173 iso_pu_bacteria 2582581298 2585222602 473
174 iso_pu_bacteria 2585427529 2585545185 473
175 iso_pu_bacteria 2643221549 2643769712 473
176 iso_pu_bacteria 2643221616 2644096934 473
177 iso_pu_bacteria 2643221619 2644114366 473
178 iso_pu_bacteria 2884763398 2884765868 473
179 iso_pu_bacteria 2919100787 2919106488 473
180 3300037471 Ga0395905_0051740 Ga0395905_0051740_1794_3272 474
181 iso_pu_bacteria 2808606700 2810365456 474
182 3300046518 Ga0495631_0001801 Ga0495631_0001801_6886_8370 476
183 3300046519 Ga0495632_0014588 Ga0495632_0014588_122_1606 476
184 3300046616 Ga0495668_0002211 Ga0495668_0002211_4548_6032 476
185 3300046660 Ga0495625_0004374 Ga0495625_0004374_1096_2580 476
186 3300046691 Ga0495670_0022488 Ga0495670_0022488_1170_2654 476
187 3300049460 Ga0495682_0008321 Ga0495682_0008321_2576_4060 476
188 3300049581 Ga0501047_0063852 Ga0501047_0063852_254_1738 476
189 3300053079 Ga0500610_0002901 Ga0500610_0002901_1758_3242 476
190 3300053105 Ga0500557_000710 Ga0500557_000710_2637_4121 476
191 3300053118 Ga0500594_0000765 Ga0500594_0000765_300_1784 476
192 3300053139 Ga0500568_0000113 Ga0500568_0000113_35843_37327 476
193 3300053153 Ga0500616_0000199 Ga0500616_0000199_84742_86226 476
194 3300002739 JGI25158J39367_1000024 JGI25158J39367_100002431 477
195 3300002773 JGI25152J39213_1000540 JGI25152J39213_100054015 477
196 3300002773 JGI25152J39213_1001107 JGI25152J39213_100110712 477
197 3300002987 JGI25159J45721_1005790 JGI25159J45721_10057904 477
198 3300003215 JGI25153J46596_10000618 JGI25153J46596_100006184 477
199 3300003215 JGI25153J46596_10001833 JGI25153J46596_100018332 477
200 3300003374 JGI25161J50226_1000207 JGI25161J50226_100020725 477
201 3300003771 Ga0055526_1000707 Ga0055526_100070710 477
202 3300003790 Ga0055528_1002170 Ga0055528_10021707 477
203 3300003792 Ga0055540_1001245 Ga0055540_10012452 477
204 3300004625 Ga0055543_1000053 Ga0055543_10000539 477
205 3300025208 Ga0209436_100011 Ga0209436_1000115 477
206 3300025258 Ga0209129_1000256 Ga0209129_100025652 477
207 3300025258 Ga0209129_1001429 Ga0209129_10014293 477
208 3300025273 Ga0209673_1006082 Ga0209673_10060823 477
209 3300025284 Ga0209130_1000081 Ga0209130_100008179 477
210 3300025294 Ga0209025_1005874 Ga0209025_10058742 477
211 3300025295 Ga0209564_1000260 Ga0209564_100026099 477
212 3300025297 Ga0209758_1001270 Ga0209758_100127030 477
213 3300025297 Ga0209758_1006442 Ga0209758_10064423 477
214 3300025299 Ga0209256_1006142 Ga0209256_10061422 477
215 3300025302 Ga0207426_1000008 Ga0207426_1000008559 477
216 3300025303 Ga0209051_1018996 Ga0209051_10189962 477
217 3300046506 Ga0495583_0013160 Ga0495583_0013160_3051_4535 477
218 3300048909 Ga0496106_0000038 Ga0496106_0000038_3486_4970 477
219 3300048920 Ga0496117_0008977 Ga0496117_0008977_113_1597 477
220 3300048924 Ga0496121_0013224 Ga0496121_0013224_1737_3221 477
221 3300048925 Ga0496122_0011020 Ga0496122_0011020_3144_4628 477
222 3300048928 Ga0496125_0019988 Ga0496125_0019988_4314_5798 477
223 3300053139 Ga0500568_0000365 Ga0500568_0000365_18872_20356 477

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

66

463

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.7868 25 462
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.7864 25 462
6kki-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward-occluded conformation 0.7797 25 462
8pnl-assembly1.cif.gz_A outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.7743 24 463
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.7724 25 462
ID Description Score Start End Superfamily
af_Q2FW85_259_476_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9585 262 467 1.20.1250.20
af_Q2FVL1_227_449_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9254 263 470 1.20.1250.20
af_A0A0R0FYN5_9_161_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9122 58 142 1.20.1250.20
af_Q2FW85_259_476_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9031 262 467 1.20.1250.20
af_P9WJY5_299_520_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8954 263 468 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A843G772-F1-model_v4 MFS transporter 0.9507 25 142 GO:0005886
GO:0015297
GO:0046677
GO:1902600
AF-A0A6C9QF22-F1-model_v4 MFS transporter 0.9056 25 161 GO:0005886
GO:0022857
AF-A0A497M167-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.901 26 167 GO:0005886
GO:0022857
AF-A0A843G772-F1-model_v4 MFS transporter 0.8926 25 142 GO:0005886
GO:0015297
GO:0046677
GO:1902600
AF-V4J606-F1-model_v4 Major Facilitator Superfamily 0.8924 263 470 GO:0016020
GO:0022857

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pLDDT pTM Quality
80.58 0.83 High
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Predicted Structure (AlphaFold2)

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