F335004

General Info

Members Datasets Scaffolds Average Seq Length
222 152 222 144

Family's Representative Sequence

Representative Sequence 3300053078|Ga0495612_0365386|Ga0495612_0365386_37_501
Length 154
Sequence MDGRAHAREVPMNVETILRNKGNWVATIRPDATVGDAVDTLKRERIGAIVVSEDGEGVDGILSERDIVAALANDGALLLSRPVAEVMTRGVMVCDPQDTVAELMSEMTNRRMRHFPVVADGKLCGIVSIGDLVKSRLDEIEFEASSMRSFIAGA

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
5 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
6 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
7 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
8 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
67 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
73 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
106 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
111 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
112 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
113 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
114 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
115 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
126 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
127 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
128 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
129 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
130 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
131 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
132 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
133 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
134 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
135 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
139 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
140 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
148 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
149 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300059512 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.64
Metatranscriptomes 10.36
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.45
Rhizosphere 88.29
Stem 0
Stem Tuber 0
Unclassified 11.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10001280 3300001989 Bacteria 9462
2 JGI24739J22299_10004807 3300001989 Bacteria 5151
3 JGI24737J22298_10000385 3300001990 Bacteria 15064
4 JGI24737J22298_10024104 3300001990 Bacteria 1927
5 JGI24735J21928_10000473 3300002067 Bacteria 14111
6 JGI24735J21928_10020873 3300002067 Unclassified 2004
7 JGI24738J21930_10000086 3300002075 Bacteria 20821
8 JGI24738J21930_10003593 3300002075 Bacteria 3889
9 Ga0007429J51699_1073835 3300003579 Bacteria 539
10 Ga0058863_10524740 3300004799 Bacteria 574
11 Ga0058861_11897876 3300004800 Bacteria 641
12 Ga0058862_11612342 3300004803 Bacteria 1675
13 Ga0065707_10099620 3300005295 Bacteria 2992
14 Ga0070658_11834460 3300005327 Unclassified 524
15 Ga0070670_100557039 3300005331 Unclassified 1023
16 Ga0070670_100569476 3300005331 Bacteria 1012
17 Ga0070666_10147983 3300005335 Bacteria 1638
18 Ga0070680_100735164 3300005336 Bacteria 849
19 Ga0070671_100040324 3300005355 Bacteria 3877
20 Ga0070671_100284372 3300005355 Bacteria 1407
21 Ga0070709_10030980 3300005434 Bacteria 3214
22 Ga0070714_100062695 3300005435 Unclassified 3195
23 Ga0070714_100125793 3300005435 Bacteria 2285
24 Ga0070710_10240953 3300005437 Bacteria 1158
25 Ga0070678_101466381 3300005456 Unclassified 638
26 Ga0070662_100007042 3300005457 Bacteria 7274
27 Ga0070662_100133399 3300005457 Bacteria 1918
28 Ga0070681_10133749 3300005458 Unclassified 2411
29 Ga0070706_100111809 3300005467 Bacteria 2542
30 Ga0070707_100002306 3300005468 Bacteria 18242
31 Ga0070698_100144974 3300005471 Bacteria 2325
32 Ga0070699_100209747 3300005518 Bacteria 1734
33 Ga0070679_100093840 3300005530 Bacteria 2988
34 Ga0070684_100694887 3300005535 Bacteria 948
35 Ga0070697_100095367 3300005536 Bacteria 2467
36 Ga0068853_100037212 3300005539 Bacteria 4140
37 Ga0068853_100536585 3300005539 Unclassified 1107
38 Ga0070672_101746764 3300005543 Bacteria 559
39 Ga0070686_100767045 3300005544 Unclassified 775
40 Ga0070695_100418391 3300005545 Bacteria 1020
41 Ga0070665_100685240 3300005548 Bacteria 1038
42 Ga0068855_100294532 3300005563 Unclassified 1798
43 Ga0068855_101508194 3300005563 Unclassified 690
44 Ga0070664_100112360 3300005564 Bacteria 2379
45 Ga0070664_102044115 3300005564 Bacteria 544
46 Ga0068857_100002287 3300005577 Bacteria 15571
47 Ga0068857_100131525 3300005577 Unclassified 2257
48 Ga0068857_100661124 3300005577 Unclassified 991
49 Ga0068856_100922286 3300005614 Bacteria 892
50 Ga0070702_100239034 3300005615 Bacteria 1225
51 Ga0068852_100070716 3300005616 Bacteria 3062
52 Ga0068859_100280721 3300005617 Bacteria 1758
53 Ga0068851_10489049 3300005834 Unclassified 736
54 Ga0068851_10925803 3300005834 Unclassified 547
55 Ga0068863_100282379 3300005841 Bacteria 1609
56 Ga0068858_101281824 3300005842 Unclassified 721
57 Ga0068860_100705263 3300005843 Bacteria 1019
58 Ga0070717_10740484 3300006028 Bacteria 894
59 Ga0070716_100311727 3300006173 Bacteria 1099
60 Ga0070716_100946969 3300006173 Bacteria 677
61 Ga0070712_100198776 3300006175 Bacteria 1573
62 Ga0068865_100201797 3300006881 Bacteria 1544
63 Ga0075436_100026703 3300006914 Unclassified 3975
64 Ga0097620_100280723 3300006931 Bacteria 1758
65 Ga0099795_10007330 3300007788 Bacteria 3070
66 Ga0105240_10122530 3300009093 Bacteria 3129
67 Ga0111539_11663573 3300009094 Bacteria 740
68 Ga0105248_10546891 3300009177 Bacteria 1306
69 Ga0105249_10097468 3300009553 Bacteria 2760
70 Ga0105249_10240906 3300009553 Bacteria 1788
71 Ga0099796_10113530 3300010159 Bacteria 1034
72 Ga0105239_10099202 3300010375 Bacteria 3220
73 Ga0157371_10015951 3300013102 Bacteria 5621
74 Ga0157371_10183960 3300013102 Unclassified 1495
75 Ga0157369_10011207 3300013105 Bacteria 10190
76 Ga0157372_10010810 3300013307 Bacteria 9717
77 Ga0157375_10179704 3300013308 Bacteria 2267
78 Ga0182008_10148454 3300014497 Bacteria 1175
79 Ga0157379_10685452 3300014968 Bacteria 961
80 Ga0157379_12268994 3300014968 Bacteria 540
81 Ga0163161_11934846 3300017792 Bacteria 525
82 Ga0197907_10125368 3300020069 Bacteria 694
83 Ga0197907_10386636 3300020069 Bacteria 526
84 Ga0197907_11253197 3300020069 Bacteria 973
85 Ga0206356_10613268 3300020070 Bacteria 619
86 Ga0206356_10626212 3300020070 Bacteria 638
87 Ga0206356_10700209 3300020070 Bacteria 642
88 Ga0206355_1105857 3300020076 Bacteria 1040
89 Ga0206355_1538787 3300020076 Bacteria 779
90 Ga0206355_1552320 3300020076 Bacteria 906
91 Ga0206352_10457487 3300020078 Bacteria 630
92 Ga0206352_10616702 3300020078 Bacteria 943
93 Ga0206352_10678463 3300020078 Bacteria 879
94 Ga0206350_11453624 3300020080 Bacteria 503
95 Ga0206353_11268034 3300020082 Bacteria 725
96 Ga0213874_10096408 3300021377 Bacteria 978
97 Ga0213874_10156594 3300021377 Bacteria 798
98 Ga0213874_10264233 3300021377 Unclassified 638
99 Ga0213876_10071278 3300021384 Bacteria 1835
100 Ga0213876_10209172 3300021384 Unclassified 1037
101 Ga0213876_10218407 3300021384 Bacteria 1014
102 Ga0213876_10251029 3300021384 Bacteria 940
103 Ga0213875_10000480 3300021388 Bacteria 34004
104 Ga0213875_10001639 3300021388 Bacteria 14135
105 Ga0213875_10114208 3300021388 Bacteria 1262
106 Ga0224712_10071402 3300022467 Unclassified 1410
107 Ga0224712_10302356 3300022467 Bacteria 748
108 Ga0224712_10433433 3300022467 Bacteria 629
109 Ga0207688_10365003 3300025901 Bacteria 891
110 Ga0207680_10081803 3300025903 Bacteria 2031
111 Ga0207705_11364094 3300025909 Unclassified 540
112 Ga0207684_10066205 3300025910 Bacteria 3068
113 Ga0207707_10171842 3300025912 Unclassified 1894
114 Ga0207695_11299242 3300025913 Unclassified 608
115 Ga0207693_10274182 3300025915 Bacteria 1322
116 Ga0207693_10599507 3300025915 Bacteria 858
117 Ga0207663_10103209 3300025916 Unclassified 1920
118 Ga0207649_11389158 3300025920 Unclassified 556
119 Ga0207652_10116254 3300025921 Unclassified 2376
120 Ga0207650_10677370 3300025925 Bacteria 870
121 Ga0207659_10730194 3300025926 Bacteria 849
122 Ga0207687_11514843 3300025927 Bacteria 576
123 Ga0207700_10002652 3300025928 Bacteria 10303
124 Ga0207700_10542985 3300025928 Bacteria 1031
125 Ga0207664_10009904 3300025929 Bacteria 6712
126 Ga0207664_10135314 3300025929 Unclassified 2079
127 Ga0207664_10941216 3300025929 Bacteria 775
128 Ga0207644_10040197 3300025931 Bacteria 3305
129 Ga0207706_10003651 3300025933 Bacteria 14704
130 Ga0207706_10245009 3300025933 Unclassified 1566
131 Ga0207704_10317672 3300025938 Bacteria 1200
132 Ga0207665_10033372 3300025939 Bacteria 3411
133 Ga0207691_10898730 3300025940 Bacteria 741
134 Ga0207711_10996995 3300025941 Bacteria 777
135 Ga0207661_10190514 3300025944 Bacteria 1798
136 Ga0207679_11012937 3300025945 Unclassified 761
137 Ga0207667_10028484 3300025949 Bacteria 6067
138 Ga0207667_12022411 3300025949 Bacteria 536
139 Ga0207640_10524471 3300025981 Unclassified 991
140 Ga0207640_12161449 3300025981 Bacteria 505
141 Ga0207677_10274404 3300026023 Bacteria 1381
142 Ga0207639_10124594 3300026041 Bacteria 2123
143 Ga0207639_10143593 3300026041 Unclassified 1992
144 Ga0207639_11132943 3300026041 Bacteria 734
145 Ga0207702_11026808 3300026078 Bacteria 818
146 Ga0207702_11700700 3300026078 Bacteria 624
147 Ga0207674_10005159 3300026116 Bacteria 15572
148 Ga0207674_10093955 3300026116 Unclassified 2986
149 Ga0207698_10002014 3300026142 Bacteria 11982
150 Ga0268264_10395120 3300028381 Bacteria 1327
151 Ga0265338_10194776 3300028800 Bacteria 1533
152 Ga0265325_10159882 3300031241 Bacteria 1060
153 Ga0265327_10000251 3300031251 Bacteria 106698
154 Ga0265327_10013333 3300031251 Bacteria 5465
155 Ga0265316_10387927 3300031344 Bacteria 1007
156 Ga0265314_10160931 3300031711 Bacteria 1366
157 Ga0307415_100939514 3300032126 Bacteria 800
158 Ga0373945_0357637 3300035116 Bacteria 634
159 Ga0373953_0007877 3300035117 Bacteria 3591
160 Ga0373953_0145171 3300035117 Bacteria 1016
161 Ga0373954_0115288 3300035118 Bacteria 1302
162 Ga0373957_0253840 3300035120 Bacteria 740
163 Ga0373943_0116190 3300035170 Bacteria 1417
164 Ga0373935_0057669 3300035692 Bacteria 2478
165 Ga0373935_0520518 3300035692 Unclassified 865
166 Ga0373927_0222021 3300035695 Bacteria 1241
167 Ga0373927_0754153 3300035695 Unclassified 643
168 Ga0373947_0170858 3300035725 Bacteria 1410
169 Ga0373937_0019323 3300036401 Bacteria 6097
170 Ga0373937_0036792 3300036401 Bacteria 4461
171 Ga0373925_0490894 3300037068 Bacteria 1008
172 Ga0373925_0881554 3300037068 Bacteria 737
173 Ga0436364_0010042 3300037853 Bacteria 102214
174 Ga0436364_0074250 3300037853 Bacteria 26320
175 Ga0436364_0746314 3300037853 Bacteria 1419
176 Ga0436364_1173492 3300037853 Bacteria 932
177 Ga0436365_0423936 3300039437 Bacteria 1325
178 Ga0436365_0600996 3300039437 Bacteria 10416
179 Ga0436365_0621136 3300039437 Bacteria 2720
180 Ga0436365_0625957 3300039437 Bacteria 1663
181 Ga0436365_0974189 3300039437 Bacteria 1268
182 Ga0436365_1428444 3300039437 Bacteria 1379
183 Ga0436365_1453042 3300039437 Bacteria 640
184 Ga0436365_1603253 3300039437 Bacteria 972
185 Ga0436360_0358149 3300039438 Bacteria 2521
186 Ga0436361_0438093 3300039447 Unclassified 695
187 Ga0436363_0026774 3300039450 Bacteria 989
188 Ga0436363_0368009 3300039450 Unclassified 792
189 Ga0436363_1211038 3300039450 Bacteria 975
190 Ga0436362_0063368 3300039453 Bacteria 898
191 Ga0436362_0162298 3300039453 Bacteria 718
192 Ga0436362_0468388 3300039453 Bacteria 3136
193 Ga0466963_0155768 3300044694 Bacteria 1588
194 Ga0466957_0981322 3300044842 Unclassified 606
195 Ga0466967_0193828 3300045976 Bacteria 1922
196 Ga0466967_0332982 3300045976 Bacteria 1466
197 Ga0495592_0022970 3300046454 Bacteria 4746
198 Ga0495664_0289544 3300046477 Bacteria 989
199 Ga0495618_0315310 3300046514 Bacteria 969
200 Ga0495628_0360228 3300046516 Bacteria 1068
201 Ga0495640_0124162 3300046533 Bacteria 1675
202 Ga0495586_0106001 3300046535 Bacteria 1563
203 Ga0495586_0318204 3300046535 Bacteria 892
204 Ga0495667_0023697 3300046559 Bacteria 4134
205 Ga0495635_0195061 3300046663 Bacteria 1374
206 Ga0495657_0289935 3300046675 Bacteria 978
207 Ga0495599_0156834 3300046678 Bacteria 1408
208 Ga0495600_0013539 3300046809 Bacteria 5129
209 Ga0495674_1139056 3300047319 Bacteria 592
210 Ga0496112_0444356 3300048915 Bacteria 1235
211 Ga0501047_0788483 3300049581 Bacteria 765
212 Ga0501235_000374 3300049669 Bacteria 8597
213 nmdc:mga0n895_2154784_c1 3300050512 Unclassified 513
214 nmdc:mga0n895_375355_c1 3300050512 Bacteria 1147
215 nmdc:mga0n895_548826_c1 3300050512 Bacteria 1161
216 nmdc:mga08x19_19650_c1 3300050514 Unclassified 4149
217 Ga0495601_0008424 3300053077 Bacteria 6092
218 Ga0495612_0365386 3300053078 Bacteria 653
219 Ga0495595_0017680 3300053084 Bacteria 3070
220 Ga0495619_0067229 3300053085 Bacteria 2392
221 Ga0587083_0199800 3300059505 Bacteria 570
222 Ga0587092_157239 3300059512 Unclassified 512

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039447 Ga0436361_0438093 Ga0436361_0438093_15_407 129
2 3300050512 nmdc:mga0n895_2154784_c1 nmdc:mga0n895_2154784_c1_106_498 129
3 3300049669 Ga0501235_000374 Ga0501235_000374_8155_8577 134
4 3300009553 Ga0105249_10097468 Ga0105249_100974683 140
5 3300010375 Ga0105239_10099202 Ga0105239_100992027 140
6 3300013102 Ga0157371_10015951 Ga0157371_100159518 140
7 3300013105 Ga0157369_10011207 Ga0157369_1001120712 140
8 3300021384 Ga0213876_10218407 Ga0213876_102184071 140
9 3300032126 Ga0307415_100939514 Ga0307415_1009395141 140
10 3300039437 Ga0436365_0423936 Ga0436365_0423936_812_1240 140
11 3300003579 Ga0007429J51699_1073835 Ga0007429J51699_10738351 141
12 3300004799 Ga0058863_10524740 Ga0058863_105247401 141
13 3300004800 Ga0058861_11897876 Ga0058861_118978762 141
14 3300004803 Ga0058862_11612342 Ga0058862_116123422 141
15 3300005331 Ga0070670_100557039 Ga0070670_1005570392 141
16 3300005335 Ga0070666_10147983 Ga0070666_101479833 141
17 3300005336 Ga0070680_100735164 Ga0070680_1007351642 141
18 3300005355 Ga0070671_100284372 Ga0070671_1002843721 141
19 3300005434 Ga0070709_10030980 Ga0070709_100309803 141
20 3300005435 Ga0070714_100062695 Ga0070714_1000626953 141
21 3300005435 Ga0070714_100125793 Ga0070714_1001257933 141
22 3300005437 Ga0070710_10240953 Ga0070710_102409532 141
23 3300005456 Ga0070678_101466381 Ga0070678_1014663811 141
24 3300005458 Ga0070681_10133749 Ga0070681_101337492 141
25 3300005467 Ga0070706_100111809 Ga0070706_1001118092 141
26 3300005468 Ga0070707_100002306 Ga0070707_10000230619 141
27 3300005471 Ga0070698_100144974 Ga0070698_1001449742 141
28 3300005518 Ga0070699_100209747 Ga0070699_1002097472 141
29 3300005530 Ga0070679_100093840 Ga0070679_1000938404 141
30 3300005536 Ga0070697_100095367 Ga0070697_1000953672 141
31 3300005543 Ga0070672_101746764 Ga0070672_1017467641 141
32 3300005544 Ga0070686_100767045 Ga0070686_1007670451 141
33 3300005545 Ga0070695_100418391 Ga0070695_1004183912 141
34 3300005548 Ga0070665_100685240 Ga0070665_1006852403 141
35 3300005564 Ga0070664_102044115 Ga0070664_1020441151 141
36 3300005577 Ga0068857_100661124 Ga0068857_1006611242 141
37 3300005614 Ga0068856_100922286 Ga0068856_1009222862 141
38 3300005615 Ga0070702_100239034 Ga0070702_1002390341 141
39 3300005834 Ga0068851_10925803 Ga0068851_109258031 141
40 3300005841 Ga0068863_100282379 Ga0068863_1002823791 141
41 3300005842 Ga0068858_101281824 Ga0068858_1012818242 141
42 3300005843 Ga0068860_100705263 Ga0068860_1007052632 141
43 3300006028 Ga0070717_10740484 Ga0070717_107404842 141
44 3300006173 Ga0070716_100311727 Ga0070716_1003117272 141
45 3300006173 Ga0070716_100946969 Ga0070716_1009469691 141
46 3300006175 Ga0070712_100198776 Ga0070712_1001987762 141
47 3300006881 Ga0068865_100201797 Ga0068865_1002017972 141
48 3300006914 Ga0075436_100026703 Ga0075436_1000267034 141
49 3300007788 Ga0099795_10007330 Ga0099795_100073301 141
50 3300009094 Ga0111539_11663573 Ga0111539_116635731 141
51 3300009177 Ga0105248_10546891 Ga0105248_105468912 141
52 3300009553 Ga0105249_10240906 Ga0105249_102409062 141
53 3300010159 Ga0099796_10113530 Ga0099796_101135302 141
54 3300013308 Ga0157375_10179704 Ga0157375_101797042 141
55 3300014497 Ga0182008_10148454 Ga0182008_101484542 141
56 3300014968 Ga0157379_12268994 Ga0157379_122689941 141
57 3300017792 Ga0163161_11934846 Ga0163161_119348461 141
58 3300020069 Ga0197907_10125368 Ga0197907_101253681 141
59 3300020069 Ga0197907_10386636 Ga0197907_103866361 141
60 3300020069 Ga0197907_11253197 Ga0197907_112531971 141
61 3300020070 Ga0206356_10613268 Ga0206356_106132682 141
62 3300020070 Ga0206356_10626212 Ga0206356_106262121 141
63 3300020070 Ga0206356_10700209 Ga0206356_107002091 141
64 3300020076 Ga0206355_1105857 Ga0206355_11058572 141
65 3300020076 Ga0206355_1538787 Ga0206355_15387871 141
66 3300020076 Ga0206355_1552320 Ga0206355_15523202 141
67 3300020078 Ga0206352_10457487 Ga0206352_104574872 141
68 3300020078 Ga0206352_10616702 Ga0206352_106167021 141
69 3300020078 Ga0206352_10678463 Ga0206352_106784631 141
70 3300020080 Ga0206350_11453624 Ga0206350_114536241 141
71 3300020082 Ga0206353_11268034 Ga0206353_112680342 141
72 3300021377 Ga0213874_10264233 Ga0213874_102642331 141
73 3300021384 Ga0213876_10251029 Ga0213876_102510292 141
74 3300021388 Ga0213875_10001639 Ga0213875_100016397 141
75 3300022467 Ga0224712_10071402 Ga0224712_100714021 141
76 3300022467 Ga0224712_10302356 Ga0224712_103023562 141
77 3300022467 Ga0224712_10433433 Ga0224712_104334331 141
78 3300025901 Ga0207688_10365003 Ga0207688_103650031 141
79 3300025903 Ga0207680_10081803 Ga0207680_100818032 141
80 3300025910 Ga0207684_10066205 Ga0207684_100662053 141
81 3300025912 Ga0207707_10171842 Ga0207707_101718422 141
82 3300025913 Ga0207695_11299242 Ga0207695_112992421 141
83 3300025915 Ga0207693_10274182 Ga0207693_102741823 141
84 3300025915 Ga0207693_10599507 Ga0207693_105995071 141
85 3300025916 Ga0207663_10103209 Ga0207663_101032093 141
86 3300025921 Ga0207652_10116254 Ga0207652_101162543 141
87 3300025925 Ga0207650_10677370 Ga0207650_106773701 141
88 3300025926 Ga0207659_10730194 Ga0207659_107301941 141
89 3300025927 Ga0207687_11514843 Ga0207687_115148431 141
90 3300025928 Ga0207700_10002652 Ga0207700_1000265211 141
91 3300025928 Ga0207700_10542985 Ga0207700_105429852 141
92 3300025929 Ga0207664_10009904 Ga0207664_100099046 141
93 3300025929 Ga0207664_10135314 Ga0207664_101353144 141
94 3300025929 Ga0207664_10941216 Ga0207664_109412162 141
95 3300025938 Ga0207704_10317672 Ga0207704_103176722 141
96 3300025939 Ga0207665_10033372 Ga0207665_100333723 141
97 3300025940 Ga0207691_10898730 Ga0207691_108987301 141
98 3300025941 Ga0207711_10996995 Ga0207711_109969952 141
99 3300025981 Ga0207640_10524471 Ga0207640_105244712 141
100 3300026023 Ga0207677_10274404 Ga0207677_102744042 141
101 3300026041 Ga0207639_11132943 Ga0207639_111329432 141
102 3300026078 Ga0207702_11026808 Ga0207702_110268081 141
103 3300026078 Ga0207702_11700700 Ga0207702_117007001 141
104 3300028381 Ga0268264_10395120 Ga0268264_103951202 141
105 3300031251 Ga0265327_10000251 Ga0265327_1000025165 141
106 3300035116 Ga0373945_0357637 Ga0373945_0357637_192_623 141
107 3300035117 Ga0373953_0007877 Ga0373953_0007877_1515_1946 141
108 3300035117 Ga0373953_0145171 Ga0373953_0145171_81_512 141
109 3300035118 Ga0373954_0115288 Ga0373954_0115288_629_1060 141
110 3300035120 Ga0373957_0253840 Ga0373957_0253840_205_636 141
111 3300035170 Ga0373943_0116190 Ga0373943_0116190_202_633 141
112 3300035692 Ga0373935_0057669 Ga0373935_0057669_347_778 141
113 3300035692 Ga0373935_0520518 Ga0373935_0520518_198_629 141
114 3300035695 Ga0373927_0222021 Ga0373927_0222021_565_996 141
115 3300035695 Ga0373927_0754153 Ga0373927_0754153_15_446 141
116 3300035725 Ga0373947_0170858 Ga0373947_0170858_785_1216 141
117 3300036401 Ga0373937_0019323 Ga0373937_0019323_1613_2044 141
118 3300036401 Ga0373937_0036792 Ga0373937_0036792_2656_3087 141
119 3300037068 Ga0373925_0490894 Ga0373925_0490894_332_763 141
120 3300037068 Ga0373925_0881554 Ga0373925_0881554_136_567 141
121 3300037853 Ga0436364_0074250 Ga0436364_0074250_16075_16506 141
122 3300039437 Ga0436365_1428444 Ga0436365_1428444_170_601 141
123 3300039437 Ga0436365_1453042 Ga0436365_1453042_35_466 141
124 3300039437 Ga0436365_1603253 Ga0436365_1603253_299_730 141
125 3300039438 Ga0436360_0358149 Ga0436360_0358149_1870_2445 141
126 3300039450 Ga0436363_0368009 Ga0436363_0368009_254_685 141
127 3300039453 Ga0436362_0063368 Ga0436362_0063368_139_570 141
128 3300039453 Ga0436362_0162298 Ga0436362_0162298_187_618 141
129 3300039453 Ga0436362_0468388 Ga0436362_0468388_296_727 141
130 3300045976 Ga0466967_0193828 Ga0466967_0193828_902_1351 141
131 3300046454 Ga0495592_0022970 Ga0495592_0022970_3641_4072 141
132 3300046477 Ga0495664_0289544 Ga0495664_0289544_361_792 141
133 3300046514 Ga0495618_0315310 Ga0495618_0315310_41_472 141
134 3300046516 Ga0495628_0360228 Ga0495628_0360228_149_580 141
135 3300046533 Ga0495640_0124162 Ga0495640_0124162_1032_1463 141
136 3300046535 Ga0495586_0106001 Ga0495586_0106001_973_1404 141
137 3300046535 Ga0495586_0318204 Ga0495586_0318204_346_777 141
138 3300046559 Ga0495667_0023697 Ga0495667_0023697_994_1425 141
139 3300046663 Ga0495635_0195061 Ga0495635_0195061_413_844 141
140 3300046675 Ga0495657_0289935 Ga0495657_0289935_411_842 141
141 3300046678 Ga0495599_0156834 Ga0495599_0156834_648_1079 141
142 3300046809 Ga0495600_0013539 Ga0495600_0013539_32_463 141
143 3300047319 Ga0495674_1139056 Ga0495674_1139056_18_449 141
144 3300050512 nmdc:mga0n895_375355_c1 nmdc:mga0n895_375355_c1_687_1118 141
145 3300050512 nmdc:mga0n895_548826_c1 nmdc:mga0n895_548826_c1_650_1081 141
146 3300050514 nmdc:mga08x19_19650_c1 nmdc:mga08x19_19650_c1_1245_1676 141
147 3300053077 Ga0495601_0008424 Ga0495601_0008424_4890_5321 141
148 3300053078 Ga0495612_0365386 Ga0495612_0365386_37_501 141
149 3300053084 Ga0495595_0017680 Ga0495595_0017680_629_1060 141
150 3300053085 Ga0495619_0067229 Ga0495619_0067229_1492_1923 141
151 3300059505 Ga0587083_0199800 Ga0587083_0199800_51_482 141
152 3300059512 Ga0587092_157239 Ga0587092_157239_27_458 141
153 3300005331 Ga0070670_100569476 Ga0070670_1005694761 142
154 3300005355 Ga0070671_100040324 Ga0070671_1000403241 142
155 3300005535 Ga0070684_100694887 Ga0070684_1006948871 142
156 3300009093 Ga0105240_10122530 Ga0105240_101225302 142
157 3300013102 Ga0157371_10183960 Ga0157371_101839602 142
158 3300013307 Ga0157372_10010810 Ga0157372_100108108 142
159 3300014968 Ga0157379_10685452 Ga0157379_106854521 142
160 3300021377 Ga0213874_10096408 Ga0213874_100964081 142
161 3300021377 Ga0213874_10156594 Ga0213874_101565942 142
162 3300021384 Ga0213876_10209172 Ga0213876_102091722 142
163 3300021388 Ga0213875_10000480 Ga0213875_1000048031 142
164 3300021388 Ga0213875_10114208 Ga0213875_101142082 142
165 3300025931 Ga0207644_10040197 Ga0207644_100401972 142
166 3300028800 Ga0265338_10194776 Ga0265338_101947761 142
167 3300031241 Ga0265325_10159882 Ga0265325_101598822 142
168 3300031251 Ga0265327_10013333 Ga0265327_100133332 142
169 3300031344 Ga0265316_10387927 Ga0265316_103879271 142
170 3300031711 Ga0265314_10160931 Ga0265314_101609312 142
171 3300037853 Ga0436364_0010042 Ga0436364_0010042_25651_26085 142
172 3300037853 Ga0436364_0746314 Ga0436364_0746314_168_602 142
173 3300037853 Ga0436364_1173492 Ga0436364_1173492_415_849 142
174 3300039437 Ga0436365_0621136 Ga0436365_0621136_1790_2224 142
175 3300039437 Ga0436365_0625957 Ga0436365_0625957_748_1182 142
176 3300039437 Ga0436365_0974189 Ga0436365_0974189_727_1161 142
177 3300039450 Ga0436363_0026774 Ga0436363_0026774_167_613 142
178 3300039450 Ga0436363_1211038 Ga0436363_1211038_67_501 142
179 3300044694 Ga0466963_0155768 Ga0466963_0155768_416_850 142
180 3300044842 Ga0466957_0981322 Ga0466957_0981322_71_505 142
181 3300045976 Ga0466967_0332982 Ga0466967_0332982_225_659 142
182 3300048915 Ga0496112_0444356 Ga0496112_0444356_143_577 142
183 3300049581 Ga0501047_0788483 Ga0501047_0788483_308_754 142
184 3300025944 Ga0207661_10190514 Ga0207661_101905143 143
185 3300021384 Ga0213876_10071278 Ga0213876_100712781 144
186 3300039437 Ga0436365_0600996 Ga0436365_0600996_4184_4639 144
187 3300001989 JGI24739J22299_10004807 JGI24739J22299_100048076 146
188 3300001990 JGI24737J22298_10000385 JGI24737J22298_100003859 146
189 3300002067 JGI24735J21928_10000473 JGI24735J21928_100004734 146
190 3300002075 JGI24738J21930_10003593 JGI24738J21930_100035933 146
191 3300005295 Ga0065707_10099620 Ga0065707_100996203 146
192 3300005327 Ga0070658_11834460 Ga0070658_118344601 146
193 3300005457 Ga0070662_100007042 Ga0070662_1000070429 146
194 3300005539 Ga0068853_100037212 Ga0068853_1000372122 146
195 3300005563 Ga0068855_100294532 Ga0068855_1002945322 146
196 3300005564 Ga0070664_100112360 Ga0070664_1001123605 146
197 3300005577 Ga0068857_100002287 Ga0068857_10000228711 146
198 3300005616 Ga0068852_100070716 Ga0068852_1000707167 146
199 3300005617 Ga0068859_100280721 Ga0068859_1002807213 146
200 3300005834 Ga0068851_10489049 Ga0068851_104890491 146
201 3300006931 Ga0097620_100280723 Ga0097620_1002807233 146
202 3300025909 Ga0207705_11364094 Ga0207705_113640941 146
203 3300025920 Ga0207649_11389158 Ga0207649_113891581 146
204 3300025933 Ga0207706_10003651 Ga0207706_1000365113 146
205 3300025945 Ga0207679_11012937 Ga0207679_110129371 146
206 3300025949 Ga0207667_10028484 Ga0207667_1002848411 146
207 3300026041 Ga0207639_10124594 Ga0207639_101245941 146
208 3300026116 Ga0207674_10005159 Ga0207674_1000515911 146
209 3300026142 Ga0207698_10002014 Ga0207698_100020143 146
210 3300001989 JGI24739J22299_10001280 JGI24739J22299_100012805 148
211 3300001990 JGI24737J22298_10024104 JGI24737J22298_100241043 148
212 3300002067 JGI24735J21928_10020873 JGI24735J21928_100208734 148
213 3300002075 JGI24738J21930_10000086 JGI24738J21930_1000008627 148
214 3300005457 Ga0070662_100133399 Ga0070662_1001333992 148
215 3300005539 Ga0068853_100536585 Ga0068853_1005365852 148
216 3300005563 Ga0068855_101508194 Ga0068855_1015081941 148
217 3300005577 Ga0068857_100131525 Ga0068857_1001315255 148
218 3300025933 Ga0207706_10245009 Ga0207706_102450092 148
219 3300025949 Ga0207667_12022411 Ga0207667_120224111 148
220 3300025981 Ga0207640_12161449 Ga0207640_121614491 148
221 3300026041 Ga0207639_10143593 Ga0207639_101435931 148
222 3300026116 Ga0207674_10093955 Ga0207674_100939554 148

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00571

CBS

CBS domain

83

138

0.95

PF00571

CBS

CBS domain

25

73

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fhm-assembly2.cif.gz_C crystal structure of the cbs-domain containing protein atu1752 from agrobacterium tumefaciens 0.9472 12 123
3fhm-assembly1.cif.gz_D crystal structure of the cbs-domain containing protein atu1752 from agrobacterium tumefaciens 0.9424 12 123
2rc3-assembly1.cif.gz_D crystal structure of cbs domain, ne2398 0.9364 13 124
4fry-assembly1.cif.gz_A the structure of a putative signal-transduction protein with cbs domains from burkholderia ambifaria mc40-6 0.9195 1 125
3fhm-assembly2.cif.gz_B crystal structure of the cbs-domain containing protein atu1752 from agrobacterium tumefaciens 0.9188 1 123
ID Description Score Start End Superfamily
af_P71737_1_141_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9481 1 139 3.10.580.10
3fhmD00 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9424 12 123 3.10.580.10
2rc3D00 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9364 13 124 3.10.580.10
af_P71737_1_141_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9287 1 139 3.10.580.10
af_A0A1D6Q1S7_52_188_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9212 2 121 3.10.580.10
ID Description Score Start End GO Terms
AF-A0A257EK86-F1-model_v4 CBS domain-containing protein 0.9803 13 138
AF-A7HWI6-F1-model_v4 Putative signal-transduction protein with CBS domains 0.973 12 140
AF-A5P9J9-F1-model_v4 CBS domain-containing protein 0.9681 1 138
AF-A0A1E4B575-F1-model_v4 Histidine kinase 0.9638 1 139 GO:0016301
AF-M3DMJ5-F1-model_v4 CBS domain protein 0.9611 1 141

Feature Viewer

pLDDT pTM Quality
92.05 0.8 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map