F334770
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 222 | 164 | 444 | 200 |
Family's Representative Sequence
| Representative Sequence | 3300046452|Ga0495617_010502|Ga0495617_010502_1344_2024 |
| Length | 226 |
| Sequence | MPQRGPAGASLRRVWLPLWQQWTVEHMSEKQKKHKLVIIVGSVREGRFGPVVTSWVAEQARVHGGFDVEVVDLADIEIPLSLPAASPKFAGDSYPRPEAMAPLTSRLEGAEAFILVTPEYNHSYPASLKAAIDWHFTQWTAKPVAFVSYGGAAGGRHAVLHLENVLTELHAVTIRDGLAFPNYFTAWQDGQPLDPEAPGYAKTLLDQLAWWAAALSAARDASPYPA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 2 | 3300002075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 | Metagenome | Rhizosphere |
| 3 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 4 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 5 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 6 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 7 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 9 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 10 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 11 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 12 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 13 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 14 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 15 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 27 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 28 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 29 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 30 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 31 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 32 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 33 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 34 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 35 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 36 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 37 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 38 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 39 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 40 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 41 | 3300033545 | Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 | Metagenome | Unclassified |
| 42 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 43 | 3300041460 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG | Metagenome | Rhizoplane |
| 44 | 3300041498 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG | Metagenome | Unclassified |
| 45 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 46 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 47 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 48 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 49 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 50 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 51 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 52 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 53 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 54 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 55 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 56 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 57 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 58 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 59 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 60 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 102 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 103 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 104 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 105 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 106 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 107 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 108 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 109 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300053095 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere | Metagenome | Endosphere |
| 131 | 3300053101 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere | Metagenome | Endosphere |
| 132 | 3300053149 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere | Metagenome | Endosphere |
| 133 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 134 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 135 | 2527291627 | Frankia casuarinae Thr | Isolate | Nodule |
| 136 | 2527291629 | Frankia sp. BMG5.23 | Isolate | Nodule |
| 137 | 2546825537 | Frankia sp. CcI6 | Isolate | Rhizoplane |
| 138 | 2551306166 | Nocardia tenerifensis NBRC 101015 | Isolate | Rhizosphere |
| 139 | 2576861822 | Frankia sp. CeD | Isolate | Nodule |
| 140 | 2582581313 | Streptomyces mirabilis OV308 | Isolate | Rhizosphere |
| 141 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 142 | 2643221647 | Streptomyces sp. Root369 | Isolate | Unclassified |
| 143 | 2643221678 | Streptomyces sp. Root1310 | Isolate | Unclassified |
| 144 | 2643221692 | Nocardia sp. Root136 | Isolate | Unclassified |
| 145 | 2684623035 | Frankia sp. NRRL B-16219 | Isolate | Rhizosphere |
| 146 | 2684623036 | Frankia sp. CgIM4 | Isolate | Nodule |
| 147 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 148 | 2710264753 | Frankia sp. KB5 | Isolate | Nodule |
| 149 | 2773857924 | Frankia sp. CgIS1 | Isolate | Nodule |
| 150 | 2784746768 | Streptomyces griseorubiginosus SAI-142 | Isolate | Unclassified |
| 151 | 2795385470 | Labedaea rhizosphaerae DSM 45361 | Isolate | Rhizosphere |
| 152 | 2818991472 | Kitasatospora viridis DSM 44826 | Isolate | Rhizosphere |
| 153 | 2862574272 | Streptomyces sp. AcE210 | Isolate | Nodule |
| 154 | 2867302475 | Micromonospora globbae WPS1-2 | Isolate | Unclassified |
| 155 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 156 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 157 | 2919713450 | Nocardia kruczakiae 4272 | Isolate | Rhizosphere |
| 158 | 2929219909 | Micromonospora sp. R-75348 Hybrid assembly | Isolate | Unclassified |
| 159 | 2954380949 | Streptomyces ciscaucasicus W1I15 | Isolate | Rhizosphere |
| 160 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 161 | 637000116 | Frankia casuarinae CcI3 | Isolate | Nodule |
| 162 | 8002775197 | Frankia nepalensis CN7 | Isolate | Nodule |
| 163 | 8055066027 | Sphaerisporangium corydalis NEAU-YHS15 | Isolate | Unclassified |
| 164 | 8055172936 | Sphaerisporangium perillae NEAU-ZS1 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.49 |
| Metatranscriptomes | 0 |
| Isolates | 13.51 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.8 |
| Nodule | 4.5 |
| Rhizoplane | 2.25 |
| Rhizosphere | 71.62 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0495617_010502 | 3300046452 | Bacteria | 3172 |
| 2 | JGI24738J21930_10045871 | 3300002075 | Bacteria | 889 |
| 3 | rootH1_10111506 | 3300003323 | Bacteria | 2117 |
| 4 | Ga0068856_100128299 | 3300005614 | Bacteria | 2540 |
| 5 | Ga0068863_100006491 | 3300005841 | Bacteria | 11470 |
| 6 | Ga0081455_10219366 | 3300005937 | Bacteria | 1411 |
| 7 | Ga0070715_10240919 | 3300006163 | Bacteria | 940 |
| 8 | Ga0075428_100087996 | 3300006844 | Bacteria | 3388 |
| 9 | Ga0075430_100078444 | 3300006846 | Bacteria | 2768 |
| 10 | Ga0075431_100084785 | 3300006847 | Bacteria | 3271 |
| 11 | Ga0075431_100088161 | 3300006847 | Bacteria | 3202 |
| 12 | Ga0075431_100124789 | 3300006847 | Bacteria | 2657 |
| 13 | Ga0075429_100072435 | 3300006880 | Bacteria | 3001 |
| 14 | Ga0075429_100227794 | 3300006880 | Bacteria | 1632 |
| 15 | Ga0105244_10136129 | 3300009036 | Bacteria | 1183 |
| 16 | Ga0111539_10221327 | 3300009094 | Bacteria | 2204 |
| 17 | Ga0105247_10003354 | 3300009101 | Bacteria | 10479 |
| 18 | Ga0114129_10057656 | 3300009147 | Bacteria | 5433 |
| 19 | Ga0114129_10804276 | 3300009147 | Bacteria | 1199 |
| 20 | Ga0105243_10712820 | 3300009148 | Bacteria | 979 |
| 21 | Ga0105248_10020025 | 3300009177 | Bacteria | 7408 |
| 22 | Ga0105246_10023827 | 3300011119 | Bacteria | 3967 |
| 23 | Ga0157380_10171568 | 3300014326 | Bacteria | 1896 |
| 24 | Ga0157379_10007294 | 3300014968 | Bacteria | 9571 |
| 25 | Ga0207710_10000175 | 3300025900 | Bacteria | 65485 |
| 26 | Ga0207647_10020999 | 3300025904 | Bacteria | 4366 |
| 27 | Ga0207702_10580368 | 3300026078 | Bacteria | 1099 |
| 28 | Ga0207641_10003944 | 3300026088 | Bacteria | 12963 |
| 29 | Ga0209371_1031840 | 3300027312 | Bacteria | 1140 |
| 30 | Ga0307517_10079096 | 3300028786 | Bacteria | 2833 |
| 31 | Ga0307515_10000535 | 3300028794 | Bacteria | 89416 |
| 32 | Ga0307515_10220891 | 3300028794 | Bacteria | 1713 |
| 33 | Ga0307515_10342360 | 3300028794 | Bacteria | 1147 |
| 34 | Ga0265338_10031859 | 3300028800 | Bacteria | 5159 |
| 35 | Ga0268256_1043160 | 3300030500 | Bacteria | 997 |
| 36 | Ga0307511_10000940 | 3300030521 | Bacteria | 30847 |
| 37 | Ga0307511_10003983 | 3300030521 | Bacteria | 15103 |
| 38 | Ga0307512_10003507 | 3300030522 | Bacteria | 18139 |
| 39 | Ga0307512_10008633 | 3300030522 | Bacteria | 9902 |
| 40 | Ga0307512_10215009 | 3300030522 | Bacteria | 1015 |
| 41 | Ga0307509_10004747 | 3300031507 | Bacteria | 19386 |
| 42 | Ga0307509_10029322 | 3300031507 | Bacteria | 6109 |
| 43 | Ga0307509_10055069 | 3300031507 | Bacteria | 4229 |
| 44 | Ga0307508_10003278 | 3300031616 | Bacteria | 16503 |
| 45 | Ga0307508_10040246 | 3300031616 | Bacteria | 4197 |
| 46 | Ga0307514_10028302 | 3300031649 | Bacteria | 4522 |
| 47 | Ga0307514_10189290 | 3300031649 | Bacteria | 1313 |
| 48 | Ga0307516_10005066 | 3300031730 | Bacteria | 15946 |
| 49 | Ga0307518_10079839 | 3300031838 | Bacteria | 2362 |
| 50 | Ga0307518_10172614 | 3300031838 | Bacteria | 1472 |
| 51 | Ga0307407_10560266 | 3300031903 | Bacteria | 846 |
| 52 | Ga0307411_10056775 | 3300032005 | Bacteria | 2583 |
| 53 | Ga0307507_10025676 | 3300033179 | Bacteria | 6380 |
| 54 | Ga0307507_10057968 | 3300033179 | Bacteria | 3641 |
| 55 | Ga0307510_10031456 | 3300033180 | Bacteria | 5996 |
| 56 | Ga0307510_10264789 | 3300033180 | Bacteria | 1198 |
| 57 | Ga0316214_1001192 | 3300033545 | Bacteria | 2948 |
| 58 | Ga0395898_0031037 | 3300037466 | Bacteria | 5344 |
| 59 | Ga0451802_1088862 | 3300041460 | Bacteria | 796 |
| 60 | Ga0451841_0401401 | 3300041498 | Bacteria | 1237 |
| 61 | Ga0439449_0012372 | 3300042007 | Bacteria | 3209 |
| 62 | Ga0439458_0011740 | 3300042157 | Bacteria | 1961 |
| 63 | Ga0439458_0075024 | 3300042157 | Bacteria | 858 |
| 64 | Ga0466969_0065979 | 3300044656 | Bacteria | 1748 |
| 65 | Ga0466972_0066171 | 3300044658 | Bacteria | 1728 |
| 66 | Ga0466972_0094963 | 3300044658 | Bacteria | 1413 |
| 67 | Ga0466966_0076713 | 3300044684 | Bacteria | 2086 |
| 68 | Ga0466966_0123538 | 3300044684 | Bacteria | 1589 |
| 69 | Ga0466961_0030485 | 3300044693 | Bacteria | 3466 |
| 70 | Ga0466963_0054421 | 3300044694 | Bacteria | 2660 |
| 71 | Ga0466964_0122513 | 3300044706 | Bacteria | 1174 |
| 72 | Ga0466971_0003344 | 3300044719 | Bacteria | 6846 |
| 73 | Ga0466971_0040480 | 3300044719 | Bacteria | 2093 |
| 74 | Ga0466968_0001865 | 3300044735 | Bacteria | 7625 |
| 75 | Ga0466968_0192682 | 3300044735 | Bacteria | 952 |
| 76 | Ga0466970_0002888 | 3300044765 | Bacteria | 8318 |
| 77 | Ga0466970_0080155 | 3300044765 | Bacteria | 1764 |
| 78 | Ga0466960_0027163 | 3300044901 | Bacteria | 2608 |
| 79 | Ga0466959_0045620 | 3300045049 | Bacteria | 3227 |
| 80 | Ga0466959_0272633 | 3300045049 | Bacteria | 1163 |
| 81 | Ga0466958_0100800 | 3300045836 | Bacteria | 1795 |
| 82 | Ga0466967_0907609 | 3300045976 | Bacteria | 876 |
| 83 | Ga0495592_0067680 | 3300046454 | Bacteria | 2609 |
| 84 | Ga0495603_0051150 | 3300046455 | Bacteria | 2455 |
| 85 | Ga0495629_0013684 | 3300046459 | Bacteria | 5854 |
| 86 | Ga0495629_0135881 | 3300046459 | Bacteria | 1712 |
| 87 | Ga0495638_0117300 | 3300046460 | Bacteria | 1576 |
| 88 | Ga0495638_0136756 | 3300046460 | Bacteria | 1434 |
| 89 | Ga0495638_0178848 | 3300046460 | Bacteria | 1212 |
| 90 | Ga0495653_0480981 | 3300046463 | Bacteria | 777 |
| 91 | Ga0495662_0025461 | 3300046476 | Bacteria | 2857 |
| 92 | Ga0495585_0030676 | 3300046492 | Bacteria | 3057 |
| 93 | Ga0495594_0353431 | 3300046499 | Bacteria | 837 |
| 94 | Ga0495607_0048432 | 3300046501 | Bacteria | 2485 |
| 95 | Ga0495606_0001231 | 3300046507 | Bacteria | 35820 |
| 96 | Ga0495631_0168604 | 3300046518 | Bacteria | 939 |
| 97 | Ga0495666_0241728 | 3300046526 | Bacteria | 824 |
| 98 | Ga0495652_0045032 | 3300046529 | Bacteria | 3797 |
| 99 | Ga0495640_0056059 | 3300046533 | Bacteria | 2694 |
| 100 | Ga0495587_0032840 | 3300046536 | Bacteria | 3135 |
| 101 | Ga0495645_0077420 | 3300046543 | Bacteria | 2391 |
| 102 | Ga0495622_0017610 | 3300046557 | Bacteria | 3327 |
| 103 | Ga0495668_0000326 | 3300046616 | Bacteria | 65274 |
| 104 | Ga0495634_0004093 | 3300046642 | Bacteria | 11549 |
| 105 | Ga0495611_0154625 | 3300046648 | Bacteria | 1071 |
| 106 | Ga0495625_0005980 | 3300046660 | Bacteria | 10938 |
| 107 | Ga0495625_0021931 | 3300046660 | Bacteria | 4905 |
| 108 | Ga0495625_0053018 | 3300046660 | Bacteria | 2903 |
| 109 | Ga0495625_0067897 | 3300046660 | Bacteria | 2508 |
| 110 | Ga0495625_0080645 | 3300046660 | Bacteria | 2266 |
| 111 | Ga0495635_0080975 | 3300046663 | Bacteria | 2222 |
| 112 | Ga0495657_0005015 | 3300046675 | Bacteria | 10517 |
| 113 | Ga0495657_0014956 | 3300046675 | Bacteria | 5691 |
| 114 | Ga0495646_0231268 | 3300046680 | Bacteria | 996 |
| 115 | Ga0495613_0007586 | 3300046689 | Bacteria | 8066 |
| 116 | Ga0495613_0011271 | 3300046689 | Bacteria | 6640 |
| 117 | Ga0495613_0183150 | 3300046689 | Bacteria | 1483 |
| 118 | Ga0495671_0027482 | 3300046692 | Bacteria | 2939 |
| 119 | Ga0495589_0008702 | 3300046794 | Bacteria | 5286 |
| 120 | Ga0495660_0126573 | 3300046810 | Bacteria | 1286 |
| 121 | Ga0495581_0154111 | 3300047315 | Bacteria | 1343 |
| 122 | Ga0495604_0001665 | 3300047317 | Bacteria | 18291 |
| 123 | Ga0495636_0156722 | 3300047318 | Bacteria | 1024 |
| 124 | Ga0495674_0570057 | 3300047319 | Bacteria | 899 |
| 125 | Ga0495676_0002502 | 3300047321 | Bacteria | 16361 |
| 126 | Ga0495683_0001033 | 3300047323 | Bacteria | 19350 |
| 127 | Ga0495683_0001091 | 3300047323 | Bacteria | 18767 |
| 128 | Ga0495687_003685 | 3300047443 | Bacteria | 10907 |
| 129 | Ga0495687_042356 | 3300047443 | Bacteria | 1990 |
| 130 | Ga0495675_0053174 | 3300047444 | Bacteria | 2571 |
| 131 | Ga0495685_005090 | 3300047447 | Bacteria | 4281 |
| 132 | Ga0495685_016617 | 3300047447 | Bacteria | 2515 |
| 133 | Ga0495685_024127 | 3300047447 | Bacteria | 2093 |
| 134 | Ga0495685_038679 | 3300047447 | Bacteria | 1634 |
| 135 | Ga0495681_0003427 | 3300047470 | Bacteria | 11030 |
| 136 | Ga0495684_0088634 | 3300047471 | Bacteria | 2345 |
| 137 | Ga0495614_0010586 | 3300048089 | Bacteria | 4065 |
| 138 | Ga0495614_0202433 | 3300048089 | Bacteria | 898 |
| 139 | Ga0495614_0274266 | 3300048089 | Bacteria | 775 |
| 140 | Ga0495626_0000046 | 3300048091 | Bacteria | 162660 |
| 141 | Ga0496101_0026329 | 3300048904 | Bacteria | 4044 |
| 142 | Ga0496102_0000044 | 3300048905 | Bacteria | 187834 |
| 143 | Ga0496103_0000123 | 3300048906 | Bacteria | 83794 |
| 144 | Ga0496118_0025756 | 3300048921 | Bacteria | 5032 |
| 145 | Ga0496119_0002433 | 3300048922 | Bacteria | 20443 |
| 146 | Ga0496119_0023241 | 3300048922 | Bacteria | 4406 |
| 147 | Ga0496120_0001130 | 3300048923 | Bacteria | 34458 |
| 148 | Ga0496121_0007884 | 3300048924 | Bacteria | 12741 |
| 149 | Ga0496121_0012689 | 3300048924 | Bacteria | 9144 |
| 150 | Ga0496126_0483284 | 3300048929 | Bacteria | 992 |
| 151 | Ga0501031_0260440 | 3300049568 | Bacteria | 1127 |
| 152 | Ga0501032_0168241 | 3300049569 | Bacteria | 1438 |
| 153 | Ga0501033_0003662 | 3300049570 | Bacteria | 12529 |
| 154 | Ga0501033_0118774 | 3300049570 | Bacteria | 1920 |
| 155 | Ga0501034_1166991 | 3300049571 | Bacteria | 649 |
| 156 | Ga0501037_0097690 | 3300049573 | Bacteria | 2122 |
| 157 | Ga0501037_0105978 | 3300049573 | Bacteria | 2026 |
| 158 | Ga0501038_0000755 | 3300049574 | Bacteria | 28852 |
| 159 | Ga0501038_0053772 | 3300049574 | Bacteria | 3465 |
| 160 | Ga0501042_0261063 | 3300049578 | Bacteria | 1250 |
| 161 | Ga0501043_0079996 | 3300049579 | Bacteria | 2568 |
| 162 | Ga0501047_0000056 | 3300049581 | Bacteria | 143501 |
| 163 | Ga0501047_0028670 | 3300049581 | Bacteria | 5369 |
| 164 | Ga0501047_0051632 | 3300049581 | Bacteria | 3973 |
| 165 | Ga0501047_0104579 | 3300049581 | Bacteria | 2711 |
| 166 | Ga0501070_0630010 | 3300049586 | Bacteria | 853 |
| 167 | Ga0501072_0062661 | 3300049588 | Bacteria | 2933 |
| 168 | Ga0501072_0301522 | 3300049588 | Bacteria | 1274 |
| 169 | Ga0501075_0074218 | 3300049591 | Bacteria | 2573 |
| 170 | Ga0501076_0591481 | 3300049592 | Bacteria | 915 |
| 171 | Ga0501080_0097755 | 3300049742 | Bacteria | 2726 |
| 172 | Ga0501035_0034823 | 3300049822 | Bacteria | 4574 |
| 173 | Ga0501035_0055990 | 3300049822 | Bacteria | 3520 |
| 174 | Ga0501035_0142529 | 3300049822 | Bacteria | 2083 |
| 175 | Ga0501035_0190797 | 3300049822 | Bacteria | 1762 |
| 176 | Ga0501035_0293613 | 3300049822 | Bacteria | 1371 |
| 177 | Ga0501044_0009928 | 3300049823 | Bacteria | 10340 |
| 178 | Ga0501044_0220647 | 3300049823 | Bacteria | 1846 |
| 179 | nmdc:mga05p37_184106_c1 | 3300050507 | Bacteria | 2540 |
| 180 | nmdc:mga05p37_468664_c1 | 3300050507 | Bacteria | 1454 |
| 181 | nmdc:mga09592_45031_c1 | 3300050508 | Bacteria | 3716 |
| 182 | nmdc:mga0qj67_42157_c1 | 3300050509 | Bacteria | 3592 |
| 183 | nmdc:mga0qj67_862437_c1 | 3300050509 | Bacteria | 715 |
| 184 | nmdc:mga06r32_261650_c1 | 3300050510 | Bacteria | 1718 |
| 185 | nmdc:mga06r32_713709_c1 | 3300050510 | Bacteria | 968 |
| 186 | Ga0495619_0068253 | 3300053085 | Bacteria | 2375 |
| 187 | Ga0500640_038271 | 3300053095 | Bacteria | 2107 |
| 188 | Ga0500553_052473 | 3300053101 | Bacteria | 1949 |
| 189 | Ga0500600_0296871 | 3300053149 | Bacteria | 694 |
| 190 | Ga0500616_0000880 | 3300053153 | Bacteria | 33112 |
| 191 | Ga0466962_0011464 | 3300061719 | Bacteria | 4267 |
| 192 | Ga0466962_0044543 | 3300061719 | Bacteria | 2122 |
| 193 | 2528202822 | 2527291627 | Bacteria | 5309833 |
| 194 | 2528213198 | 2527291629 | Bacteria | 5267418 |
| 195 | 2546947664 | 2546825537 | Bacteria | 5389291 |
| 196 | 2552109998 | 2551306166 | Bacteria | 9731570 |
| 197 | 2579748351 | 2576861822 | Bacteria | 5004595 |
| 198 | 2585305561 | 2582581313 | Bacteria | 10042643 |
| 199 | 2623585604 | 2622736626 | Bacteria | 7181580 |
| 200 | 2644262657 | 2643221647 | Bacteria | 10741251 |
| 201 | 2644440697 | 2643221678 | Bacteria | 9540101 |
| 202 | 2644513359 | 2643221692 | Bacteria | 7282860 |
| 203 | 2686536188 | 2684623035 | Bacteria | 8032739 |
| 204 | 2686542131 | 2684623036 | Bacteria | 5199090 |
| 205 | 2689955850 | 2687453737 | Bacteria | 11203906 |
| 206 | 2710605097 | 2710264753 | Bacteria | 5455564 |
| 207 | 2774864205 | 2773857924 | Bacteria | 5256821 |
| 208 | 2785370224 | 2784746768 | Bacteria | 10036182 |
| 209 | 2795782433 | 2795385470 | Bacteria | 8317180 |
| 210 | 2819744364 | 2818991472 | Bacteria | 10089953 |
| 211 | 2862581381 | 2862574272 | Bacteria | 10567477 |
| 212 | 2867305518 | 2867302475 | Bacteria | 7087181 |
| 213 | 2867317933 | 2867312974 | Bacteria | 7058875 |
| 214 | 2867319629 | 2867319477 | Bacteria | 7069771 |
| 215 | 2919716267 | 2919713450 | Bacteria | 7431245 |
| 216 | 2929224118 | 2929219909 | Bacteria | 6984360 |
| 217 | 2954385561 | 2954380949 | Bacteria | 10050426 |
| 218 | 2996225374 | 2996221748 | Bacteria | 6799777 |
| 219 | 637877538 | 637000116 | Bacteria | 5433628 |
| 220 | 8002780402 | 8002775197 | Bacteria | 10728764 |
| 221 | 8055068151 | 8055066027 | Bacteria | 9479577 |
| 222 | 8055175108 | 8055172936 | Bacteria | 9305943 |
| 223 | Ga0495617_010502 | |||
| 224 | JGI24738J21930_10045871 | |||
| 225 | rootH1_10111506 | |||
| 226 | Ga0068856_100128299 | |||
| 227 | Ga0068863_100006491 | |||
| 228 | Ga0081455_10219366 | |||
| 229 | Ga0070715_10240919 | |||
| 230 | Ga0075428_100087996 | |||
| 231 | Ga0075430_100078444 | |||
| 232 | Ga0075431_100084785 | |||
| 233 | Ga0075431_100088161 | |||
| 234 | Ga0075431_100124789 | |||
| 235 | Ga0075429_100072435 | |||
| 236 | Ga0075429_100227794 | |||
| 237 | Ga0105244_10136129 | |||
| 238 | Ga0111539_10221327 | |||
| 239 | Ga0105247_10003354 | |||
| 240 | Ga0114129_10057656 | |||
| 241 | Ga0114129_10804276 | |||
| 242 | Ga0105243_10712820 | |||
| 243 | Ga0105248_10020025 | |||
| 244 | Ga0105246_10023827 | |||
| 245 | Ga0157380_10171568 | |||
| 246 | Ga0157379_10007294 | |||
| 247 | Ga0207710_10000175 | |||
| 248 | Ga0207647_10020999 | |||
| 249 | Ga0207702_10580368 | |||
| 250 | Ga0207641_10003944 | |||
| 251 | Ga0209371_1031840 | |||
| 252 | Ga0307517_10079096 | |||
| 253 | Ga0307515_10000535 | |||
| 254 | Ga0307515_10220891 | |||
| 255 | Ga0307515_10342360 | |||
| 256 | Ga0265338_10031859 | |||
| 257 | Ga0268256_1043160 | |||
| 258 | Ga0307511_10000940 | |||
| 259 | Ga0307511_10003983 | |||
| 260 | Ga0307512_10003507 | |||
| 261 | Ga0307512_10008633 | |||
| 262 | Ga0307512_10215009 | |||
| 263 | Ga0307509_10004747 | |||
| 264 | Ga0307509_10029322 | |||
| 265 | Ga0307509_10055069 | |||
| 266 | Ga0307508_10003278 | |||
| 267 | Ga0307508_10040246 | |||
| 268 | Ga0307514_10028302 | |||
| 269 | Ga0307514_10189290 | |||
| 270 | Ga0307516_10005066 | |||
| 271 | Ga0307518_10079839 | |||
| 272 | Ga0307518_10172614 | |||
| 273 | Ga0307407_10560266 | |||
| 274 | Ga0307411_10056775 | |||
| 275 | Ga0307507_10025676 | |||
| 276 | Ga0307507_10057968 | |||
| 277 | Ga0307510_10031456 | |||
| 278 | Ga0307510_10264789 | |||
| 279 | Ga0316214_1001192 | |||
| 280 | Ga0395898_0031037 | |||
| 281 | Ga0451802_1088862 | |||
| 282 | Ga0451841_0401401 | |||
| 283 | Ga0439449_0012372 | |||
| 284 | Ga0439458_0011740 | |||
| 285 | Ga0439458_0075024 | |||
| 286 | Ga0466969_0065979 | |||
| 287 | Ga0466972_0066171 | |||
| 288 | Ga0466972_0094963 | |||
| 289 | Ga0466966_0076713 | |||
| 290 | Ga0466966_0123538 | |||
| 291 | Ga0466961_0030485 | |||
| 292 | Ga0466963_0054421 | |||
| 293 | Ga0466964_0122513 | |||
| 294 | Ga0466971_0003344 | |||
| 295 | Ga0466971_0040480 | |||
| 296 | Ga0466968_0001865 | |||
| 297 | Ga0466968_0192682 | |||
| 298 | Ga0466970_0002888 | |||
| 299 | Ga0466970_0080155 | |||
| 300 | Ga0466960_0027163 | |||
| 301 | Ga0466959_0045620 | |||
| 302 | Ga0466959_0272633 | |||
| 303 | Ga0466958_0100800 | |||
| 304 | Ga0466967_0907609 | |||
| 305 | Ga0495592_0067680 | |||
| 306 | Ga0495603_0051150 | |||
| 307 | Ga0495629_0013684 | |||
| 308 | Ga0495629_0135881 | |||
| 309 | Ga0495638_0117300 | |||
| 310 | Ga0495638_0136756 | |||
| 311 | Ga0495638_0178848 | |||
| 312 | Ga0495653_0480981 | |||
| 313 | Ga0495662_0025461 | |||
| 314 | Ga0495585_0030676 | |||
| 315 | Ga0495594_0353431 | |||
| 316 | Ga0495607_0048432 | |||
| 317 | Ga0495606_0001231 | |||
| 318 | Ga0495631_0168604 | |||
| 319 | Ga0495666_0241728 | |||
| 320 | Ga0495652_0045032 | |||
| 321 | Ga0495640_0056059 | |||
| 322 | Ga0495587_0032840 | |||
| 323 | Ga0495645_0077420 | |||
| 324 | Ga0495622_0017610 | |||
| 325 | Ga0495668_0000326 | |||
| 326 | Ga0495634_0004093 | |||
| 327 | Ga0495611_0154625 | |||
| 328 | Ga0495625_0005980 | |||
| 329 | Ga0495625_0021931 | |||
| 330 | Ga0495625_0053018 | |||
| 331 | Ga0495625_0067897 | |||
| 332 | Ga0495625_0080645 | |||
| 333 | Ga0495635_0080975 | |||
| 334 | Ga0495657_0005015 | |||
| 335 | Ga0495657_0014956 | |||
| 336 | Ga0495646_0231268 | |||
| 337 | Ga0495613_0007586 | |||
| 338 | Ga0495613_0011271 | |||
| 339 | Ga0495613_0183150 | |||
| 340 | Ga0495671_0027482 | |||
| 341 | Ga0495589_0008702 | |||
| 342 | Ga0495660_0126573 | |||
| 343 | Ga0495581_0154111 | |||
| 344 | Ga0495604_0001665 | |||
| 345 | Ga0495636_0156722 | |||
| 346 | Ga0495674_0570057 | |||
| 347 | Ga0495676_0002502 | |||
| 348 | Ga0495683_0001033 | |||
| 349 | Ga0495683_0001091 | |||
| 350 | Ga0495687_003685 | |||
| 351 | Ga0495687_042356 | |||
| 352 | Ga0495675_0053174 | |||
| 353 | Ga0495685_005090 | |||
| 354 | Ga0495685_016617 | |||
| 355 | Ga0495685_024127 | |||
| 356 | Ga0495685_038679 | |||
| 357 | Ga0495681_0003427 | |||
| 358 | Ga0495684_0088634 | |||
| 359 | Ga0495614_0010586 | |||
| 360 | Ga0495614_0202433 | |||
| 361 | Ga0495614_0274266 | |||
| 362 | Ga0495626_0000046 | |||
| 363 | Ga0496101_0026329 | |||
| 364 | Ga0496102_0000044 | |||
| 365 | Ga0496103_0000123 | |||
| 366 | Ga0496118_0025756 | |||
| 367 | Ga0496119_0002433 | |||
| 368 | Ga0496119_0023241 | |||
| 369 | Ga0496120_0001130 | |||
| 370 | Ga0496121_0007884 | |||
| 371 | Ga0496121_0012689 | |||
| 372 | Ga0496126_0483284 | |||
| 373 | Ga0501031_0260440 | |||
| 374 | Ga0501032_0168241 | |||
| 375 | Ga0501033_0003662 | |||
| 376 | Ga0501033_0118774 | |||
| 377 | Ga0501034_1166991 | |||
| 378 | Ga0501037_0097690 | |||
| 379 | Ga0501037_0105978 | |||
| 380 | Ga0501038_0000755 | |||
| 381 | Ga0501038_0053772 | |||
| 382 | Ga0501042_0261063 | |||
| 383 | Ga0501043_0079996 | |||
| 384 | Ga0501047_0000056 | |||
| 385 | Ga0501047_0028670 | |||
| 386 | Ga0501047_0051632 | |||
| 387 | Ga0501047_0104579 | |||
| 388 | Ga0501070_0630010 | |||
| 389 | Ga0501072_0062661 | |||
| 390 | Ga0501072_0301522 | |||
| 391 | Ga0501075_0074218 | |||
| 392 | Ga0501076_0591481 | |||
| 393 | Ga0501080_0097755 | |||
| 394 | Ga0501035_0034823 | |||
| 395 | Ga0501035_0055990 | |||
| 396 | Ga0501035_0142529 | |||
| 397 | Ga0501035_0190797 | |||
| 398 | Ga0501035_0293613 | |||
| 399 | Ga0501044_0009928 | |||
| 400 | Ga0501044_0220647 | |||
| 401 | nmdc:mga05p37_184106_c1 | |||
| 402 | nmdc:mga05p37_468664_c1 | |||
| 403 | nmdc:mga09592_45031_c1 | |||
| 404 | nmdc:mga0qj67_42157_c1 | |||
| 405 | nmdc:mga0qj67_862437_c1 | |||
| 406 | nmdc:mga06r32_261650_c1 | |||
| 407 | nmdc:mga06r32_713709_c1 | |||
| 408 | Ga0495619_0068253 | |||
| 409 | Ga0500640_038271 | |||
| 410 | Ga0500553_052473 | |||
| 411 | Ga0500600_0296871 | |||
| 412 | Ga0500616_0000880 | |||
| 413 | Ga0466962_0011464 | |||
| 414 | Ga0466962_0044543 | |||
| 415 | 2528202822 | |||
| 416 | 2528213198 | |||
| 417 | 2546947664 | |||
| 418 | 2552109998 | |||
| 419 | 2579748351 | |||
| 420 | 2585305561 | |||
| 421 | 2623585604 | |||
| 422 | 2644262657 | |||
| 423 | 2644440697 | |||
| 424 | 2644513359 | |||
| 425 | 2686536188 | |||
| 426 | 2686542131 | |||
| 427 | 2689955850 | |||
| 428 | 2710605097 | |||
| 429 | 2774864205 | |||
| 430 | 2785370224 | |||
| 431 | 2795782433 | |||
| 432 | 2819744364 | |||
| 433 | 2862581381 | |||
| 434 | 2867305518 | |||
| 435 | 2867317933 | |||
| 436 | 2867319629 | |||
| 437 | 2919716267 | |||
| 438 | 2929224118 | |||
| 439 | 2954385561 | |||
| 440 | 2996225374 | |||
| 441 | 637877538 | |||
| 442 | 8002780402 | |||
| 443 | 8055068151 | |||
| 444 | 8055175108 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7bx9-assembly1.cif.gz_A | purification, characterization and x-ray structure of yhda-type azoreductase from bacillus velezensis | 0.8725 | 31 | 206 |
| 3gfr-assembly2.cif.gz_B | structure of yhda, d137l variant | 0.863 | 32 | 208 |
| 2fzv-assembly1.cif.gz_D | crystal structure of an apo form of a flavin-binding protein from shigella flexneri | 0.862 | 29 | 216 |
| 2gsw-assembly2.cif.gz_D | crystal structure of the putative nadph-dependent azobenzene fmn-reductase yhda from bacillus subtilis, northeast structural genomics target sr135 | 0.859 | 32 | 209 |
| 3gfq-assembly1.cif.gz_A | structure of yhda, k109l variant | 0.8572 | 32 | 209 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q9USJ6_13_177_3.40.50.360 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain | 0.9407 | 31 | 176 | 3.40.50.360 |
| af_Q2G135_1_177_3.40.50.360 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain | 0.8674 | 31 | 211 | 3.40.50.360 |
| 2fzvC00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain | 0.8538 | 29 | 216 | 3.40.50.360 |
| af_Q54QT4_9_187_3.40.50.360 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain | 0.8506 | 31 | 200 | 3.40.50.360 |
| af_Q2G135_1_177_3.40.50.360 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain | 0.8493 | 31 | 211 | 3.40.50.360 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A5N0UXA3-F1-model_v4 | NAD(P)H-dependent oxidoreductase | 0.9966 | 29 | 221 |
GO:0005829
GO:0010181 GO:0016491 |
| AF-A0A0N1FKG5-F1-model_v4 | NADPH-dependent FMN reductase | 0.9951 | 28 | 221 |
GO:0005829
GO:0010181 GO:0016491 |
| AF-A0A0K1JE68-F1-model_v4 | FMN reductase | 0.9868 | 28 | 221 |
GO:0005829
GO:0010181 GO:0016491 |
| AF-A0A5N0UXA3-F1-model_v4 | NAD(P)H-dependent oxidoreductase | 0.9864 | 29 | 221 |
GO:0005829
GO:0010181 GO:0016491 |
| AF-A0A419YAU6-F1-model_v4 | NAD(P)H-dependent FMN reductase | 0.9788 | 29 | 218 |
GO:0005829
GO:0010181 GO:0016491 |