F334750

General Info

Members Datasets Scaffolds Average Seq Length
222 137 217 238

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0054838|Ga0453684_0054838_1925_2770
Length 281
Sequence VYKKRLLRRFPGGKILVCLPGLLCHSPRTNFIMSTWNAYGAEFAGTALLILLGDGVVANVVLNKTKGNQGGWIVIALGWAMGVFAGVLCAKDASGAHLNPAVSIALAVAGKFSWTLVPGYVAAQMLGAFAGAMLVYAHYRQHFAVSDNPDAKLGVFCTGPAIRGLGNNFFCETLGCFVLLFAVLYITEPQFASQGDNVMIGLGTIGALPVALMVLAIGLSLGGTTGYAINPARDLSPRLAHALLPIPGKRDSDWGYSWVPVLGPIVGGLIAVGVWRGLSAL

Samples

Sample ID Description Type Environment
1 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
2 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
3 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
4 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
5 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
6 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
55 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
56 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
78 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
79 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
80 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
81 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
89 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
90 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
99 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
102 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
107 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
110 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
111 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
114 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
115 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
118 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
119 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
120 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
127 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
128 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.85
Metatranscriptomes 0.45
Isolates 2.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.45
Nodule 0
Rhizoplane 1.35
Rhizosphere 93.24
Stem 0
Stem Tuber 0
Unclassified 4.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10002866 3300002459 Bacteria 3477
2 rootH1_10009129 3300003316 Bacteria 4691
3 rootH1_10009129 3300003323 Bacteria 74318
4 rootL2_10069315 3300003322 Bacteria 3601
5 rootH1_10066607 3300003323 Bacteria 1117
6 rootH1_10342433 3300003323 Bacteria 1135
7 Ga0065714_10074509 3300005288 Bacteria 3028
8 Ga0070658_10383807 3300005327 Bacteria 1206
9 Ga0070676_10062280 3300005328 Bacteria 2219
10 Ga0070666_10143246 3300005335 Bacteria 1665
11 Ga0070680_100035310 3300005336 Bacteria 4035
12 Ga0070668_100440024 3300005347 Bacteria 1119
13 Ga0070671_100296877 3300005355 Bacteria 1375
14 Ga0070659_100065878 3300005366 Unclassified 2869
15 Ga0070703_10025272 3300005406 Bacteria 1761
16 Ga0070711_100222429 3300005439 Bacteria 1468
17 Ga0070663_100096332 3300005455 Unclassified 2201
18 Ga0070698_100002332 3300005471 Bacteria 20989
19 Ga0070699_100159728 3300005518 Bacteria 1995
20 Ga0070672_100078079 3300005543 Bacteria 2648
21 Ga0070696_100016731 3300005546 Bacteria 4945
22 Ga0070704_100058458 3300005549 Bacteria 2746
23 Ga0070664_100080808 3300005564 Bacteria 2800
24 Ga0068857_100067167 3300005577 Bacteria 3191
25 Ga0068857_100122698 3300005577 Bacteria 2340
26 Ga0068864_100127459 3300005618 Bacteria 2282
27 Ga0068863_100003034 3300005841 Bacteria 16603
28 Ga0068863_100162398 3300005841 Bacteria 2141
29 Ga0068860_100281555 3300005843 Bacteria 1625
30 Ga0081540_1016743 3300005983 Bacteria 4571
31 Ga0097621_100423258 3300006237 Unclassified 1196
32 Ga0068871_100164326 3300006358 Bacteria 1899
33 Ga0075428_100023973 3300006844 Bacteria 6753
34 Ga0075428_100214385 3300006844 Bacteria 2080
35 Ga0075431_100078522 3300006847 Bacteria 3407
36 Ga0075433_10067838 3300006852 Bacteria 3130
37 Ga0075433_10154036 3300006852 Bacteria 2045
38 Ga0075434_100023679 3300006871 Bacteria 5989
39 Ga0075434_100037480 3300006871 Bacteria 4799
40 Ga0075434_100078894 3300006871 Bacteria 3289
41 Ga0075434_100097099 3300006871 Bacteria 2951
42 Ga0075429_100011799 3300006880 Bacteria 7575
43 Ga0068865_100111969 3300006881 Unclassified 2015
44 Ga0075436_100022026 3300006914 Bacteria 4376
45 Ga0075436_100025430 3300006914 Bacteria 4075
46 Ga0075435_100009048 3300007076 Bacteria 7184
47 Ga0075435_100092831 3300007076 Bacteria 2493
48 Ga0111539_10138974 3300009094 Bacteria 2845
49 Ga0111539_10334506 3300009094 Bacteria 1763
50 Ga0111539_10899797 3300009094 Bacteria 1029
51 Ga0105245_10092961 3300009098 Bacteria 2779
52 Ga0105242_11002665 3300009176 Bacteria 843
53 Ga0105238_10000956 3300009551 Bacteria 29649
54 Ga0105239_10024812 3300010375 Bacteria 6605
55 Ga0157373_10230305 3300013100 Bacteria 1308
56 Ga0157371_10328432 3300013102 Bacteria 1111
57 Ga0157370_10368117 3300013104 Bacteria 1324
58 Ga0157369_10092223 3300013105 Bacteria 3232
59 Ga0157378_10057343 3300013297 Bacteria 3471
60 Ga0157378_10205490 3300013297 Unclassified 1865
61 Ga0163162_10000244 3300013306 Bacteria 49260
62 Ga0163162_10025970 3300013306 Bacteria 5788
63 Ga0163162_10147292 3300013306 Bacteria 2471
64 Ga0163162_10450185 3300013306 Bacteria 1419
65 Ga0163163_11013372 3300014325 Bacteria 894
66 Ga0182005_1000198 3300015265 Bacteria 40901
67 Ga0207426_1018870 3300025302 Bacteria 2422
68 Ga0207653_10046522 3300025885 Bacteria 1435
69 Ga0207645_10413793 3300025907 Bacteria 908
70 Ga0207663_10192080 3300025916 Bacteria 1467
71 Ga0207694_10000626 3300025924 Bacteria 32133
72 Ga0207706_10244403 3300025933 Bacteria 1569
73 Ga0207704_10071628 3300025938 Bacteria 2200
74 Ga0207691_10215770 3300025940 Bacteria 1665
75 Ga0207661_10003848 3300025944 Bacteria 10466
76 Ga0207678_10055442 3300026067 Bacteria 3414
77 Ga0207641_10012152 3300026088 Bacteria 7066
78 Ga0207648_10417113 3300026089 Bacteria 1218
79 Ga0207676_10004380 3300026095 Bacteria 9984
80 Ga0207674_10113559 3300026116 Bacteria 2682
81 Ga0207683_10210259 3300026121 Bacteria 1771
82 Ga0268265_10449933 3300028380 Bacteria 1203
83 Ga0265338_10044589 3300028800 Bacteria 4092
84 Ga0265332_10019364 3300031238 Bacteria 3004
85 Ga0265327_10024830 3300031251 Bacteria 3509
86 Ga0265327_10107609 3300031251 Unclassified 1337
87 Ga0265327_10205846 3300031251 Bacteria 890
88 Ga0265316_10003313 3300031344 Bacteria 16327
89 Ga0265316_10135829 3300031344 Bacteria 1850
90 Ga0307408_100003471 3300031548 Bacteria 10776
91 Ga0265313_10059671 3300031595 Bacteria 1793
92 Ga0307508_10001839 3300031616 Bacteria 23472
93 Ga0316575_10033161 3300031665 Bacteria 2025
94 Ga0316576_10270201 3300031727 Bacteria 1274
95 Ga0316578_10083123 3300031728 Bacteria 1907
96 Ga0316577_10003648 3300031733 Bacteria 7818
97 Ga0307410_10260649 3300031852 Bacteria 1352
98 Ga0307406_10014946 3300031901 Bacteria 4479
99 Ga0307409_100175121 3300031995 Bacteria 1893
100 Ga0307416_100930878 3300032002 Bacteria 970
101 Ga0307414_10257458 3300032004 Bacteria 1454
102 Ga0307415_100722936 3300032126 Bacteria 901
103 Ga0373939_0061356 3300035114 Bacteria 1198
104 Ga0373943_0147010 3300035170 Bacteria 1274
105 Ga0316574_0112105 3300035398 Bacteria 1749
106 Ga0373935_0048196 3300035692 Bacteria 2697
107 Ga0373927_0219294 3300035695 Bacteria 1249
108 Ga0373947_0006508 3300035725 Bacteria 6779
109 Ga0316582_0001406 3300036647 Bacteria 10503
110 Ga0316582_0020878 3300036647 Bacteria 3860
111 Ga0316584_0001257 3300036712 Bacteria 14986
112 Ga0373925_0119411 3300037068 Bacteria 2045
113 Ga0451577_0000010 3300042876 Bacteria 616686
114 Ga0451577_0001472 3300042876 Bacteria 31282
115 Ga0451577_0013750 3300042876 Bacteria 7563
116 Ga0451577_0028319 3300042876 Bacteria 5067
117 Ga0451577_0039152 3300042876 Bacteria 4261
118 Ga0451577_0045242 3300042876 Bacteria 3940
119 Ga0451577_0110398 3300042876 Bacteria 2460
120 Ga0451577_0218186 3300042876 Bacteria 1724
121 Ga0451577_0334575 3300042876 Bacteria 1373
122 Ga0451577_0477751 3300042876 Unclassified 1131
123 Ga0466969_0040043 3300044656 Bacteria 2350
124 Ga0453683_0000031 3300044673 Bacteria 241998
125 Ga0453683_0000186 3300044673 Bacteria 86082
126 Ga0453683_0021668 3300044673 Bacteria 4100
127 Ga0453683_0059574 3300044673 Bacteria 2387
128 Ga0453683_0105872 3300044673 Bacteria 1767
129 Ga0453683_0112495 3300044673 Bacteria 1712
130 Ga0453683_0113450 3300044673 Bacteria 1705
131 Ga0453683_0178407 3300044673 Bacteria 1347
132 Ga0453683_0382604 3300044673 Bacteria 906
133 Ga0466961_0270553 3300044693 Bacteria 1041
134 Ga0466964_0400792 3300044706 Bacteria 717
135 Ga0453684_0000191 3300044712 Bacteria 267816
136 Ga0453684_0000333 3300044712 Bacteria 196669
137 Ga0453684_0000598 3300044712 Bacteria 133485
138 Ga0453684_0001278 3300044712 Bacteria 75250
139 Ga0453684_0001454 3300044712 Bacteria 67293
140 Ga0453684_0014180 3300044712 Bacteria 12802
141 Ga0453684_0029220 3300044712 Bacteria 7839
142 Ga0453684_0035565 3300044712 Bacteria 6881
143 Ga0453684_0040902 3300044712 Bacteria 6282
144 Ga0453684_0054370 3300044712 Bacteria 5215
145 Ga0453684_0054838 3300044712 Bacteria 5188
146 Ga0453684_0076291 3300044712 Bacteria 4209
147 Ga0453684_0078576 3300044712 Bacteria 4128
148 Ga0453684_0130588 3300044712 Bacteria 3014
149 Ga0453684_0144559 3300044712 Bacteria 2835
150 Ga0453684_0196678 3300044712 Bacteria 2354
151 Ga0453684_0301085 3300044712 Unclassified 1822
152 Ga0453684_0346394 3300044712 Bacteria 1676
153 Ga0453684_0430830 3300044712 Unclassified 1471
154 Ga0453684_0498097 3300044712 Unclassified 1349
155 Ga0453684_0548524 3300044712 Bacteria 1274
156 Ga0453684_0664558 3300044712 Bacteria 1136
157 Ga0466970_0223009 3300044765 Bacteria 1052
158 Ga0451576_0000088 3300045051 Bacteria 234139
159 Ga0451576_0000613 3300045051 Bacteria 74967
160 Ga0451576_0003537 3300045051 Bacteria 21306
161 Ga0451576_0013513 3300045051 Bacteria 9133
162 Ga0451576_0015989 3300045051 Bacteria 8294
163 Ga0451576_0037321 3300045051 Bacteria 5147
164 Ga0451576_0052544 3300045051 Bacteria 4270
165 Ga0451576_0056204 3300045051 Bacteria 4117
166 Ga0451576_0062909 3300045051 Bacteria 3868
167 Ga0451576_0095990 3300045051 Bacteria 3084
168 Ga0451576_0122029 3300045051 Bacteria 2713
169 Ga0451576_0175697 3300045051 Bacteria 2236
170 Ga0451576_0204955 3300045051 Bacteria 2059
171 Ga0451576_0297256 3300045051 Bacteria 1688
172 Ga0451576_0304131 3300045051 Bacteria 1668
173 Ga0451576_0460877 3300045051 Bacteria 1335
174 Ga0451576_0602626 3300045051 Bacteria 1154
175 Ga0451576_0991852 3300045051 Unclassified 880
176 Ga0495580_0104072 3300046472 Bacteria 1973
177 Ga0495580_0139297 3300046472 Bacteria 1682
178 Ga0495639_0112134 3300046475 Bacteria 1295
179 Ga0495608_0002397 3300046511 Bacteria 13490
180 Ga0495630_0000190 3300046517 Bacteria 48119
181 Ga0495630_0024830 3300046517 Bacteria 4431
182 Ga0495666_0024835 3300046526 Bacteria 2960
183 Ga0495666_0104764 3300046526 Bacteria 1331
184 Ga0495586_0000060 3300046535 Bacteria 65891
185 Ga0495634_0002225 3300046642 Bacteria 16256
186 Ga0495658_0042406 3300046683 Bacteria 2541
187 Ga0495613_0039921 3300046689 Bacteria 3478
188 Ga0495624_0188171 3300046690 Bacteria 1256
189 Ga0495581_0145317 3300047315 Bacteria 1384
190 Ga0495604_0027237 3300047317 Bacteria 4547
191 Ga0495674_0001755 3300047319 Bacteria 21345
192 Ga0495676_0007075 3300047321 Bacteria 10294
193 Ga0495675_0088089 3300047444 Bacteria 1950
194 Ga0495593_0097749 3300047673 Bacteria 1508
195 Ga0496104_0237412 3300048907 Unclassified 1735
196 Ga0496109_1151039 3300048912 Bacteria 713
197 Ga0496115_0283674 3300048918 Bacteria 1359
198 Ga0496121_0000007 3300048924 Bacteria 942516
199 Ga0501047_0185975 3300049581 Bacteria 1943
200 Ga0501257_066385 3300049686 Bacteria 917
201 Ga0501219_000501 3300049703 Bacteria 6024
202 Ga0501284_00039 3300050005 Bacteria 53400
203 nmdc:mga05p37_372422_c1 3300050507 Bacteria 1676
204 nmdc:mga05p37_718093_c1 3300050507 Bacteria 1107
205 nmdc:mga09592_6994_c1 3300050508 Bacteria 9172
206 nmdc:mga06r32_230480_c1 3300050510 Bacteria 1840
207 nmdc:mga0n895_113070_c1 3300050512 Bacteria 2732
208 nmdc:mga0n895_11842_c1 3300050512 Bacteria 7799
209 nmdc:mga0n895_375204_c1 3300050512 Bacteria 1440
210 nmdc:mga0rr50_122404_c1 3300050513 Bacteria 2073
211 nmdc:mga0rr50_238870_c1 3300050513 Bacteria 1506
212 nmdc:mga08x19_19186_c1 3300050514 Bacteria 4194
213 nmdc:mga08x19_385154_c1 3300050514 Bacteria 982
214 nmdc:mga08x19_41306_c1 3300050514 Bacteria 2937
215 nmdc:mga0a205_2208_c1 3300050515 Bacteria 17108
216 nmdc:mga0a205_468677_c1 3300050515 Bacteria 1118
217 Ga0587071_059895 3300060344 Bacteria 807

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048912 Ga0496109_1151039 Ga0496109_1151039_16_582 188
2 3300013102 Ga0157371_10328432 Ga0157371_103284321 190
3 3300026089 Ga0207648_10417113 Ga0207648_104171133 190
4 3300035695 Ga0373927_0219294 Ga0373927_0219294_92_736 198
5 3300037068 Ga0373925_0119411 Ga0373925_0119411_1337_1981 198
6 3300048918 Ga0496115_0283674 Ga0496115_0283674_729_1346 198
7 3300025907 Ga0207645_10413793 Ga0207645_104137932 208
8 3300032002 Ga0307416_100930878 Ga0307416_1009308781 209
9 3300044706 Ga0466964_0400792 Ga0466964_0400792_15_671 210
10 3300006852 Ga0075433_10067838 Ga0075433_100678383 216
11 3300006871 Ga0075434_100097099 Ga0075434_1000970992 216
12 3300006914 Ga0075436_100025430 Ga0075436_1000254303 216
13 3300007076 Ga0075435_100092831 Ga0075435_1000928312 216
14 3300042876 Ga0451577_0045242 Ga0451577_0045242_2858_3595 216
15 3300044712 Ga0453684_0001278 Ga0453684_0001278_65177_65980 216
16 3300050513 nmdc:mga0rr50_238870_c1 nmdc:mga0rr50_238870_c1_708_1442 216
17 3300050514 nmdc:mga08x19_41306_c1 nmdc:mga08x19_41306_c1_112_846 216
18 3300005546 Ga0070696_100016731 Ga0070696_1000167314 217
19 3300005549 Ga0070704_100058458 Ga0070704_1000584582 217
20 3300045051 Ga0451576_0304131 Ga0451576_0304131_236_967 219
21 3300005564 Ga0070664_100080808 Ga0070664_1000808082 221
22 3300009551 Ga0105238_10000956 Ga0105238_1000095620 221
23 3300025924 Ga0207694_10000626 Ga0207694_1000062621 221
24 3300031995 Ga0307409_100175121 Ga0307409_1001751212 221
25 3300042876 Ga0451577_0110398 Ga0451577_0110398_38_703 221
26 3300044673 Ga0453683_0382604 Ga0453683_0382604_14_679 221
27 3300005327 Ga0070658_10383807 Ga0070658_103838071 222
28 3300005406 Ga0070703_10025272 Ga0070703_100252722 222
29 3300005471 Ga0070698_100002332 Ga0070698_10000233214 222
30 3300005518 Ga0070699_100159728 Ga0070699_1001597282 222
31 3300006844 Ga0075428_100214385 Ga0075428_1002143852 222
32 3300006847 Ga0075431_100078522 Ga0075431_1000785222 222
33 3300006880 Ga0075429_100011799 Ga0075429_1000117995 222
34 3300025885 Ga0207653_10046522 Ga0207653_100465222 222
35 3300031852 Ga0307410_10260649 Ga0307410_102606492 222
36 3300050507 nmdc:mga05p37_718093_c1 nmdc:mga05p37_718093_c1_348_1046 222
37 3300060344 Ga0587071_059895 Ga0587071_059895_23_745 222
38 3300014325 Ga0163163_11013372 Ga0163163_110133721 223
39 3300005335 Ga0070666_10143246 Ga0070666_101432462 224
40 3300005577 Ga0068857_100067167 Ga0068857_1000671671 224
41 3300005841 Ga0068863_100162398 Ga0068863_1001623982 224
42 3300005843 Ga0068860_100281555 Ga0068860_1002815552 224
43 3300026116 Ga0207674_10113559 Ga0207674_101135593 224
44 3300035114 Ga0373939_0061356 Ga0373939_0061356_284_1066 224
45 3300044712 Ga0453684_0000598 Ga0453684_0000598_121261_121977 224
46 3300009094 Ga0111539_10138974 Ga0111539_101389742 225
47 3300010375 Ga0105239_10024812 Ga0105239_100248124 225
48 3300028800 Ga0265338_10044589 Ga0265338_100445893 225
49 iso_pu_bacteria 8007375930 8007379428 228
50 3300006871 Ga0075434_100078894 Ga0075434_1000788942 229
51 3300009098 Ga0105245_10092961 Ga0105245_100929612 229
52 3300044712 Ga0453684_0498097 Ga0453684_0498097_553_1290 229
53 3300046511 Ga0495608_0002397 Ga0495608_0002397_8412_9140 229
54 3300047317 Ga0495604_0027237 Ga0495604_0027237_678_1406 229
55 3300047444 Ga0495675_0088089 Ga0495675_0088089_390_1118 229
56 3300050512 nmdc:mga0n895_113070_c1 nmdc:mga0n895_113070_c1_1563_2276 229
57 3300046642 Ga0495634_0002225 Ga0495634_0002225_7841_8572 230
58 3300005983 Ga0081540_1016743 Ga0081540_10167433 231
59 iso_pu_bacteria 2818991442 2819574353 231
60 iso_pu_bacteria 2821136567 2821137675 231
61 iso_pu_bacteria 2883068021 2883072515 231
62 iso_pu_bacteria 2884791551 2884793315 231
63 iso_pu_bacteria 2904467357 2904467584 231
64 3300009094 Ga0111539_10334506 Ga0111539_103345061 232
65 3300049581 Ga0501047_0185975 Ga0501047_0185975_599_1303 232
66 3300005336 Ga0070680_100035310 Ga0070680_1000353102 233
67 3300005355 Ga0070671_100296877 Ga0070671_1002968771 233
68 3300006237 Ga0097621_100423258 Ga0097621_1004232582 233
69 3300006358 Ga0068871_100164326 Ga0068871_1001643262 233
70 3300006844 Ga0075428_100023973 Ga0075428_1000239735 233
71 3300006852 Ga0075433_10154036 Ga0075433_101540362 233
72 3300006871 Ga0075434_100023679 Ga0075434_1000236794 233
73 3300006871 Ga0075434_100037480 Ga0075434_1000374802 233
74 3300006914 Ga0075436_100022026 Ga0075436_1000220263 233
75 3300007076 Ga0075435_100009048 Ga0075435_1000090488 233
76 3300013297 Ga0157378_10057343 Ga0157378_100573432 233
77 3300013306 Ga0163162_10025970 Ga0163162_100259702 233
78 3300026121 Ga0207683_10210259 Ga0207683_102102593 233
79 3300031238 Ga0265332_10019364 Ga0265332_100193643 233
80 3300031548 Ga0307408_100003471 Ga0307408_1000034718 233
81 3300031665 Ga0316575_10033161 Ga0316575_100331612 233
82 3300031733 Ga0316577_10003648 Ga0316577_100036484 233
83 3300031901 Ga0307406_10014946 Ga0307406_100149464 233
84 3300035398 Ga0316574_0112105 Ga0316574_0112105_768_1514 233
85 3300036647 Ga0316582_0001406 Ga0316582_0001406_5091_5837 233
86 3300036712 Ga0316584_0001257 Ga0316584_0001257_2583_3329 233
87 3300044673 Ga0453683_0178407 Ga0453683_0178407_415_1146 233
88 3300045051 Ga0451576_0037321 Ga0451576_0037321_363_1094 233
89 3300045051 Ga0451576_0204955 Ga0451576_0204955_58_789 233
90 3300046472 Ga0495580_0104072 Ga0495580_0104072_592_1323 233
91 3300047673 Ga0495593_0097749 Ga0495593_0097749_337_1068 233
92 3300050507 nmdc:mga05p37_372422_c1 nmdc:mga05p37_372422_c1_538_1269 233
93 3300050508 nmdc:mga09592_6994_c1 nmdc:mga09592_6994_c1_713_1444 233
94 3300050510 nmdc:mga06r32_230480_c1 nmdc:mga06r32_230480_c1_118_849 233
95 3300050512 nmdc:mga0n895_11842_c1 nmdc:mga0n895_11842_c1_3249_3980 233
96 3300050512 nmdc:mga0n895_375204_c1 nmdc:mga0n895_375204_c1_652_1383 233
97 3300050513 nmdc:mga0rr50_122404_c1 nmdc:mga0rr50_122404_c1_1100_1831 233
98 3300050514 nmdc:mga08x19_19186_c1 nmdc:mga08x19_19186_c1_3251_3982 233
99 3300050514 nmdc:mga08x19_385154_c1 nmdc:mga08x19_385154_c1_61_792 233
100 3300050515 nmdc:mga0a205_2208_c1 nmdc:mga0a205_2208_c1_8105_8836 233
101 3300050515 nmdc:mga0a205_468677_c1 nmdc:mga0a205_468677_c1_375_1106 233
102 3300009094 Ga0111539_10899797 Ga0111539_108997971 234
103 3300013306 Ga0163162_10147292 Ga0163162_101472922 234
104 3300046472 Ga0495580_0139297 Ga0495580_0139297_34_765 234
105 3300048907 Ga0496104_0237412 Ga0496104_0237412_563_1294 234
106 3300049686 Ga0501257_066385 Ga0501257_066385_187_891 234
107 3300003323 rootH1_10066607 rootH1_100666072 235
108 3300003323 rootH1_10342433 rootH1_103424332 235
109 3300005288 Ga0065714_10074509 Ga0065714_100745093 235
110 3300005328 Ga0070676_10062280 Ga0070676_100622802 235
111 3300005347 Ga0070668_100440024 Ga0070668_1004400241 235
112 3300005366 Ga0070659_100065878 Ga0070659_1000658783 235
113 3300005455 Ga0070663_100096332 Ga0070663_1000963322 235
114 3300005543 Ga0070672_100078079 Ga0070672_1000780792 235
115 3300005577 Ga0068857_100122698 Ga0068857_1001226982 235
116 3300005618 Ga0068864_100127459 Ga0068864_1001274592 235
117 3300005841 Ga0068863_100003034 Ga0068863_10000303416 235
118 3300006881 Ga0068865_100111969 Ga0068865_1001119691 235
119 3300009176 Ga0105242_11002665 Ga0105242_110026651 235
120 3300013100 Ga0157373_10230305 Ga0157373_102303051 235
121 3300013104 Ga0157370_10368117 Ga0157370_103681171 235
122 3300013297 Ga0157378_10205490 Ga0157378_102054902 235
123 3300013306 Ga0163162_10000244 Ga0163162_1000024443 235
124 3300013306 Ga0163162_10450185 Ga0163162_104501852 235
125 3300015265 Ga0182005_1000198 Ga0182005_10001987 235
126 3300025302 Ga0207426_1018870 Ga0207426_10188702 235
127 3300025933 Ga0207706_10244403 Ga0207706_102444032 235
128 3300025938 Ga0207704_10071628 Ga0207704_100716282 235
129 3300025940 Ga0207691_10215770 Ga0207691_102157702 235
130 3300025944 Ga0207661_10003848 Ga0207661_100038483 235
131 3300026067 Ga0207678_10055442 Ga0207678_100554423 235
132 3300026088 Ga0207641_10012152 Ga0207641_100121524 235
133 3300026095 Ga0207676_10004380 Ga0207676_100043808 235
134 3300028380 Ga0268265_10449933 Ga0268265_104499332 235
135 3300031251 Ga0265327_10024830 Ga0265327_100248302 235
136 3300031251 Ga0265327_10205846 Ga0265327_102058461 235
137 3300032004 Ga0307414_10257458 Ga0307414_102574582 235
138 3300042876 Ga0451577_0001472 Ga0451577_0001472_13874_14581 235
139 3300042876 Ga0451577_0334575 Ga0451577_0334575_527_1234 235
140 3300042876 Ga0451577_0477751 Ga0451577_0477751_166_873 235
141 3300044656 Ga0466969_0040043 Ga0466969_0040043_437_1165 235
142 3300044673 Ga0453683_0000186 Ga0453683_0000186_78538_79245 235
143 3300044673 Ga0453683_0113450 Ga0453683_0113450_318_1025 235
144 3300044693 Ga0466961_0270553 Ga0466961_0270553_125_853 235
145 3300044712 Ga0453684_0000333 Ga0453684_0000333_176458_177165 235
146 3300044712 Ga0453684_0001454 Ga0453684_0001454_18022_18729 235
147 3300044712 Ga0453684_0035565 Ga0453684_0035565_346_1131 235
148 3300044712 Ga0453684_0040902 Ga0453684_0040902_5324_6031 235
149 3300044712 Ga0453684_0078576 Ga0453684_0078576_1937_2674 235
150 3300044712 Ga0453684_0196678 Ga0453684_0196678_1607_2314 235
151 3300044712 Ga0453684_0346394 Ga0453684_0346394_564_1271 235
152 3300044712 Ga0453684_0430830 Ga0453684_0430830_562_1269 235
153 3300044765 Ga0466970_0223009 Ga0466970_0223009_241_969 235
154 3300045051 Ga0451576_0000613 Ga0451576_0000613_18022_18729 235
155 3300045051 Ga0451576_0003537 Ga0451576_0003537_8144_8881 235
156 3300045051 Ga0451576_0015989 Ga0451576_0015989_6865_7572 235
157 3300045051 Ga0451576_0052544 Ga0451576_0052544_1427_2134 235
158 3300045051 Ga0451576_0056204 Ga0451576_0056204_3024_3773 235
159 3300045051 Ga0451576_0095990 Ga0451576_0095990_282_1019 235
160 3300045051 Ga0451576_0175697 Ga0451576_0175697_706_1443 235
161 3300045051 Ga0451576_0460877 Ga0451576_0460877_99_806 235
162 3300048924 Ga0496121_0000007 Ga0496121_0000007_39816_40553 235
163 3300003316 rootH1_10009129 rootH1_100091292 236
164 3300003322 rootL2_10069315 rootL2_100693152 236
165 3300005439 Ga0070711_100222429 Ga0070711_1002224291 236
166 3300013105 Ga0157369_10092223 Ga0157369_100922233 236
167 3300025916 Ga0207663_10192080 Ga0207663_101920802 236
168 3300031251 Ga0265327_10107609 Ga0265327_101076092 236
169 3300031344 Ga0265316_10003313 Ga0265316_1000331311 236
170 3300031344 Ga0265316_10135829 Ga0265316_101358292 236
171 3300031595 Ga0265313_10059671 Ga0265313_100596712 236
172 3300031616 Ga0307508_10001839 Ga0307508_1000183920 236
173 3300031727 Ga0316576_10270201 Ga0316576_102702012 236
174 3300031728 Ga0316578_10083123 Ga0316578_100831232 236
175 3300032126 Ga0307415_100722936 Ga0307415_1007229361 236
176 3300035170 Ga0373943_0147010 Ga0373943_0147010_38_796 236
177 3300035692 Ga0373935_0048196 Ga0373935_0048196_1062_1820 236
178 3300035725 Ga0373947_0006508 Ga0373947_0006508_5193_5951 236
179 3300036647 Ga0316582_0020878 Ga0316582_0020878_2253_2963 236
180 3300042876 Ga0451577_0000010 Ga0451577_0000010_543652_544365 236
181 3300042876 Ga0451577_0013750 Ga0451577_0013750_2393_3106 236
182 3300042876 Ga0451577_0028319 Ga0451577_0028319_3741_4454 236
183 3300042876 Ga0451577_0039152 Ga0451577_0039152_3448_4161 236
184 3300042876 Ga0451577_0218186 Ga0451577_0218186_541_1254 236
185 3300044673 Ga0453683_0000031 Ga0453683_0000031_151175_151888 236
186 3300044673 Ga0453683_0021668 Ga0453683_0021668_25_738 236
187 3300044673 Ga0453683_0059574 Ga0453683_0059574_92_850 236
188 3300044673 Ga0453683_0105872 Ga0453683_0105872_110_823 236
189 3300044673 Ga0453683_0112495 Ga0453683_0112495_915_1628 236
190 3300044712 Ga0453684_0000191 Ga0453684_0000191_72322_73035 236
191 3300044712 Ga0453684_0014180 Ga0453684_0014180_10079_10792 236
192 3300044712 Ga0453684_0029220 Ga0453684_0029220_1173_1883 236
193 3300044712 Ga0453684_0054370 Ga0453684_0054370_222_944 236
194 3300044712 Ga0453684_0054838 Ga0453684_0054838_1925_2770 236
195 3300044712 Ga0453684_0076291 Ga0453684_0076291_1078_1821 236
196 3300044712 Ga0453684_0130588 Ga0453684_0130588_1388_2101 236
197 3300044712 Ga0453684_0144559 Ga0453684_0144559_1834_2547 236
198 3300044712 Ga0453684_0301085 Ga0453684_0301085_384_1097 236
199 3300044712 Ga0453684_0548524 Ga0453684_0548524_547_1257 236
200 3300044712 Ga0453684_0664558 Ga0453684_0664558_211_924 236
201 3300045051 Ga0451576_0000088 Ga0451576_0000088_183182_183895 236
202 3300045051 Ga0451576_0013513 Ga0451576_0013513_688_1398 236
203 3300045051 Ga0451576_0062909 Ga0451576_0062909_1887_2600 236
204 3300045051 Ga0451576_0122029 Ga0451576_0122029_36_749 236
205 3300045051 Ga0451576_0297256 Ga0451576_0297256_649_1362 236
206 3300045051 Ga0451576_0602626 Ga0451576_0602626_156_869 236
207 3300045051 Ga0451576_0991852 Ga0451576_0991852_135_848 236
208 3300046475 Ga0495639_0112134 Ga0495639_0112134_154_903 236
209 3300046517 Ga0495630_0000190 Ga0495630_0000190_7690_8439 236
210 3300046517 Ga0495630_0024830 Ga0495630_0024830_2809_3567 236
211 3300046526 Ga0495666_0024835 Ga0495666_0024835_1716_2465 236
212 3300046526 Ga0495666_0104764 Ga0495666_0104764_120_878 236
213 3300046535 Ga0495586_0000060 Ga0495586_0000060_17056_17805 236
214 3300046683 Ga0495658_0042406 Ga0495658_0042406_702_1451 236
215 3300046689 Ga0495613_0039921 Ga0495613_0039921_2714_3463 236
216 3300046690 Ga0495624_0188171 Ga0495624_0188171_324_1073 236
217 3300047315 Ga0495581_0145317 Ga0495581_0145317_349_1098 236
218 3300047319 Ga0495674_0001755 Ga0495674_0001755_3935_4684 236
219 3300047321 Ga0495676_0007075 Ga0495676_0007075_573_1322 236
220 3300049703 Ga0501219_000501 Ga0501219_000501_3538_4281 236
221 3300050005 Ga0501284_00039 Ga0501284_00039_46886_47629 236
222 3300002459 JGI24751J29686_10002866 JGI24751J29686_100028664 237

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00230

MIP

Major intrinsic protein

30

275

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2b5f-assembly1.cif.gz_B crystal structure of the spinach aquaporin sopip2;1 in an open conformation to 3.9 resolution 0.8926 3 234
3c02-assembly1.cif.gz_A x-ray structure of the aquaglyceroporin from plasmodium falciparum 0.8842 3 236
6n1g-assembly1.cif.gz_A crystal structure of aquaglyceroporin aqp7 0.8802 3 236
4oj2-assembly1.cif.gz_X the structure of aquaporin 0.8772 3 237
2b5f-assembly1.cif.gz_D crystal structure of the spinach aquaporin sopip2;1 in an open conformation to 3.9 resolution 0.873 3 234
ID Description Score Start End Superfamily
af_Q2FYZ6_1_239_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.9638 1 234 1.20.1080.10
af_Q2FYZ6_1_239_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.9399 1 234 1.20.1080.10
2b5fB00 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.8926 3 234 1.20.1080.10
af_D3TI80_19_269_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.8921 3 236 1.20.1080.10
af_Q17571_14_259_1.20.1080.10 Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. 0.8864 3 236 1.20.1080.10
ID Description Score Start End GO Terms
AF-A0A3C1CA18-F1-model_v4 Aquaporin 0.9816 4 108 GO:0005886
GO:0015254
AF-A0A7X2MHB1-F1-model_v4 Aquaporin 0.98 1 112 GO:0005886
GO:0015254
AF-A0AIY8-F1-model_v4 Glycerol uptake facilitator protein 0.978 3 236 GO:0005886
GO:0015254
AF-A0A099W339-F1-model_v4 Aquaporin family protein (Glycerol transporter) 0.9769 3 236 GO:0005886
GO:0015254
AF-K4MKR6-F1-model_v4 Glycerol uptake transporter 0.9764 1 234 GO:0005886
GO:0015254

Feature Viewer

pLDDT pTM Quality
93.61 0.91 High
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Predicted Structure (AlphaFold2)

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