F334692

General Info

Members Datasets Scaffolds Average Seq Length
222 128 444 269

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0277058|Ga0395901_0277058_700_1539
Length 279
Sequence MYGLYNAGQKSPVGSKKLRKFDDLIPAAIVIFLSIMVAGCHRNAEVAPAAVDTGDEKAATNSIAEADRLYVQREDLAKARLAVTLLRQARTADYGNFDAAWKLARANYYLGSHTDGNEADDAFREGIEAAKAAVKLHAERPEGHFWLGANYGGSAERSTLAGLSSVEDIRSEMDTVIKIDEKFQNGSAYLGLGQLYLRAPRVLGGDTAKAIQYLQKGEQIAPENALIKLYLAEAYHMAGRDAESRKQIDVLLAMTPSPDYVPEHKDAVEQAKELQKKLK

Samples

Sample ID Description Type Environment
1 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
103 3300038699 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot26 Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
109 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
110 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
114 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
115 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
116 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
117 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
118 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
119 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
124 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
127 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
128 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.8
Rhizosphere 97.75
Stem 0
Stem Tuber 0
Unclassified 27.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395901_0277058 3300038443 Unclassified 1744
2 SwRhRL2b_contig_3750633 2162886007 Unclassified 1185
3 MBSR1b_contig_11008244 2162886012 Unclassified 944
4 rootL2_10059827 3300003322 Bacteria 5093
5 Ga0065714_10064448 3300005288 Bacteria 81247
6 Ga0065704_10072822 3300005289 Bacteria 7960
7 Ga0065712_10000125 3300005290 Bacteria 81248
8 Ga0065715_10090650 3300005293 Bacteria 6666
9 Ga0065715_10092184 3300005293 Bacteria 5264
10 Ga0065715_10453452 3300005293 Unclassified 823
11 Ga0065707_10148301 3300005295 Unclassified 1687
12 Ga0070670_100000176 3300005331 Bacteria 57932
13 Ga0070670_100028090 3300005331 Unclassified 4841
14 Ga0068869_100084054 3300005334 Bacteria 2382
15 Ga0068869_100472619 3300005334 Unclassified 1043
16 Ga0070682_100011314 3300005337 Bacteria 5097
17 Ga0070692_10026261 3300005345 Unclassified 2877
18 Ga0070692_10034088 3300005345 Unclassified 2569
19 Ga0070692_10091064 3300005345 Bacteria 1658
20 Ga0070705_100205886 3300005440 Unclassified 1352
21 Ga0070700_100218170 3300005441 Bacteria 1350
22 Ga0070694_100011620 3300005444 Bacteria 5451
23 Ga0070694_100173358 3300005444 Bacteria 1591
24 Ga0070681_10055104 3300005458 Bacteria 3960
25 Ga0068867_100106631 3300005459 Bacteria 2147
26 Ga0068867_100152020 3300005459 Bacteria 1819
27 Ga0068867_100368711 3300005459 Bacteria 1203
28 Ga0070706_100000032 3300005467 Bacteria 152892
29 Ga0070697_100100513 3300005536 Bacteria 2402
30 Ga0070697_100104105 3300005536 Archaea 2360
31 Ga0068853_100048243 3300005539 Bacteria 3657
32 Ga0070672_100273816 3300005543 Bacteria 1426
33 Ga0070695_100069633 3300005545 Bacteria 2300
34 Ga0070695_100105567 3300005545 Bacteria 1904
35 Ga0070696_100418082 3300005546 Bacteria 1052
36 Ga0070696_100514672 3300005546 Unclassified 954
37 Ga0070693_100009853 3300005547 Bacteria 4766
38 Ga0070693_100025545 3300005547 Bacteria 3181
39 Ga0068855_100234834 3300005563 Bacteria 2051
40 Ga0068855_100521084 3300005563 Unclassified 1290
41 Ga0068857_100139357 3300005577 Unclassified 2192
42 Ga0068857_100495730 3300005577 Unclassified 1146
43 Ga0068854_100173816 3300005578 Unclassified 1678
44 Ga0070702_100011798 3300005615 Bacteria 4358
45 Ga0070702_100105026 3300005615 Bacteria 1740
46 Ga0068859_100120300 3300005617 Bacteria 2692
47 Ga0068859_100357318 3300005617 Bacteria 1556
48 Ga0068859_100619467 3300005617 Bacteria 1175
49 Ga0068864_100013599 3300005618 Bacteria 6747
50 Ga0068864_100014050 3300005618 Bacteria 6641
51 Ga0068864_100016146 3300005618 Bacteria 6214
52 Ga0068864_100113017 3300005618 Unclassified 2421
53 Ga0068864_100335884 3300005618 Bacteria 1423
54 Ga0068861_100038072 3300005719 Unclassified 3578
55 Ga0068861_100062398 3300005719 Bacteria 2863
56 Ga0068861_100137655 3300005719 Bacteria 1989
57 Ga0068851_10002829 3300005834 Bacteria 7650
58 Ga0068870_10108784 3300005840 Bacteria 1579
59 Ga0068870_10157608 3300005840 Bacteria 1343
60 Ga0068863_100030002 3300005841 Bacteria 5194
61 Ga0068863_100253922 3300005841 Bacteria 1699
62 Ga0068863_100277076 3300005841 Bacteria 1624
63 Ga0068858_100024313 3300005842 Bacteria 5645
64 Ga0068858_100208396 3300005842 Bacteria 1850
65 Ga0068858_100247249 3300005842 Bacteria 1694
66 Ga0068860_100005822 3300005843 Bacteria 12409
67 Ga0068860_100042425 3300005843 Bacteria 4344
68 Ga0068860_100065357 3300005843 Bacteria 3455
69 Ga0068860_100112199 3300005843 Bacteria 2607
70 Ga0068860_100426812 3300005843 Unclassified 1315
71 Ga0068862_100027326 3300005844 Bacteria 4803
72 Ga0081539_10001119 3300005985 Bacteria 48656
73 Ga0070716_100054935 3300006173 Bacteria 2277
74 Ga0070716_100208956 3300006173 Unclassified 1303
75 Ga0097621_100003512 3300006237 Bacteria 10823
76 Ga0097621_100166345 3300006237 Bacteria 1899
77 Ga0068871_100021002 3300006358 Bacteria 5011
78 Ga0068871_100107822 3300006358 Unclassified 2340
79 Ga0075428_100025157 3300006844 Bacteria 6587
80 Ga0075430_100022491 3300006846 Bacteria 5365
81 Ga0075430_100152326 3300006846 Unclassified 1925
82 Ga0075431_100051667 3300006847 Unclassified 4238
83 Ga0075433_10007988 3300006852 Bacteria 8422
84 Ga0075433_10037796 3300006852 Bacteria 4166
85 Ga0075433_10366965 3300006852 Bacteria 1271
86 Ga0075434_100031412 3300006871 Bacteria 5236
87 Ga0075434_100037950 3300006871 Bacteria 4770
88 Ga0075434_100067094 3300006871 Unclassified 3575
89 Ga0075436_100003440 3300006914 Bacteria 10852
90 Ga0097620_100120300 3300006931 Bacteria 2692
91 Ga0097620_100357308 3300006931 Bacteria 1556
92 Ga0097620_100619545 3300006931 Bacteria 1175
93 Ga0111539_10029824 3300009094 Bacteria 6638
94 Ga0111539_10185747 3300009094 Unclassified 2428
95 Ga0111539_10639304 3300009094 Unclassified 1239
96 Ga0114129_10039360 3300009147 Bacteria 6665
97 Ga0114129_10434334 3300009147 Bacteria 1725
98 Ga0114129_10574913 3300009147 Bacteria 1463
99 Ga0105243_10014401 3300009148 Bacteria 5987
100 Ga0105243_10276881 3300009148 Bacteria 1509
101 Ga0105243_10295631 3300009148 Bacteria 1465
102 Ga0105243_10829785 3300009148 Unclassified 914
103 Ga0105241_10042367 3300009174 Unclassified 3443
104 Ga0105241_10168107 3300009174 Bacteria 1809
105 Ga0105241_10201886 3300009174 Bacteria 1661
106 Ga0105241_10297957 3300009174 Unclassified 1383
107 Ga0105241_10334987 3300009174 Bacteria 1309
108 Ga0105242_10128596 3300009176 Bacteria 2183
109 Ga0105242_10140146 3300009176 Bacteria 2098
110 Ga0105248_10025916 3300009177 Bacteria 6521
111 Ga0105248_10162196 3300009177 Bacteria 2521
112 Ga0105237_10001297 3300009545 Bacteria 33271
113 Ga0105238_10005166 3300009551 Bacteria 12904
114 Ga0105238_10041447 3300009551 Bacteria 4663
115 Ga0105246_10115623 3300011119 Bacteria 1979
116 Ga0105246_10252485 3300011119 Bacteria 1400
117 Ga0157373_10010863 3300013100 Bacteria 6701
118 Ga0157378_10294744 3300013297 Unclassified 1568
119 Ga0157378_10550011 3300013297 Bacteria 1159
120 Ga0163162_10022912 3300013306 Bacteria 6158
121 Ga0163162_10030049 3300013306 Bacteria 5381
122 Ga0163162_10070457 3300013306 Unclassified 3547
123 Ga0157372_10051026 3300013307 Bacteria 4603
124 Ga0163163_10000511 3300014325 Bacteria 34726
125 Ga0163163_10013574 3300014325 Bacteria 7461
126 Ga0157380_10167190 3300014326 Bacteria 1918
127 Ga0157379_10097200 3300014968 Bacteria 2643
128 Ga0207653_10014142 3300025885 Unclassified 2503
129 Ga0207647_10003798 3300025904 Bacteria 11286
130 Ga0207645_10302188 3300025907 Bacteria 1066
131 Ga0207643_10004009 3300025908 Bacteria 7922
132 Ga0207643_10006857 3300025908 Bacteria 6111
133 Ga0207643_10089273 3300025908 Bacteria 1795
134 Ga0207684_10000065 3300025910 Bacteria 194463
135 Ga0207654_10067290 3300025911 Bacteria 2116
136 Ga0207654_10252156 3300025911 Unclassified 1183
137 Ga0207707_10076771 3300025912 Bacteria 2915
138 Ga0207671_10007869 3300025914 Bacteria 9150
139 Ga0207660_10082331 3300025917 Unclassified 2367
140 Ga0207694_10005051 3300025924 Bacteria 10208
141 Ga0207694_10057333 3300025924 Bacteria 3028
142 Ga0207650_10000080 3300025925 Bacteria 129319
143 Ga0207650_10047191 3300025925 Bacteria 3174
144 Ga0207686_10077178 3300025934 Bacteria 2162
145 Ga0207709_10003405 3300025935 Bacteria 9497
146 Ga0207709_10111477 3300025935 Bacteria 1830
147 Ga0207670_10010283 3300025936 Bacteria 5381
148 Ga0207665_10354815 3300025939 Unclassified 1107
149 Ga0207711_10031337 3300025941 Bacteria 4488
150 Ga0207711_10565644 3300025941 Bacteria 1060
151 Ga0207689_10045986 3300025942 Unclassified 3609
152 Ga0207689_10098323 3300025942 Bacteria 2404
153 Ga0207651_10183885 3300025960 Unclassified 1661
154 Ga0207712_10003439 3300025961 Bacteria 10005
155 Ga0207640_10050389 3300025981 Bacteria 2701
156 Ga0207703_10213128 3300026035 Bacteria 1723
157 Ga0207639_10032882 3300026041 Bacteria 3822
158 Ga0207708_10033630 3300026075 Unclassified 3896
159 Ga0207708_10055950 3300026075 Unclassified 3008
160 Ga0207708_10063446 3300026075 Bacteria 2822
161 Ga0207641_10076509 3300026088 Unclassified 2893
162 Ga0207648_10130885 3300026089 Bacteria 2208
163 Ga0207648_10140366 3300026089 Bacteria 2129
164 Ga0207648_10253717 3300026089 Bacteria 1568
165 Ga0207676_10006417 3300026095 Bacteria 8311
166 Ga0207676_10125237 3300026095 Archaea 2175
167 Ga0207676_10421762 3300026095 Unclassified 1251
168 Ga0207676_10456172 3300026095 Bacteria 1206
169 Ga0207676_10503510 3300026095 Bacteria 1150
170 Ga0207674_10060838 3300026116 Unclassified 3818
171 Ga0207674_10225920 3300026116 Bacteria 1820
172 Ga0207674_10425418 3300026116 Bacteria 1283
173 Ga0207675_100056373 3300026118 Unclassified 3665
174 Ga0207675_100441499 3300026118 Bacteria 1288
175 Ga0207675_100484287 3300026118 Bacteria 1230
176 Ga0207428_10013727 3300027907 Bacteria 7061
177 Ga0207428_10445969 3300027907 Unclassified 944
178 Ga0268265_10073093 3300028380 Unclassified 2677
179 Ga0268265_10607138 3300028380 Bacteria 1046
180 Ga0268264_10043043 3300028381 Unclassified 3740
181 Ga0268264_10071704 3300028381 Bacteria 2936
182 Ga0268264_10118865 3300028381 Bacteria 2326
183 Ga0268264_10294720 3300028381 Bacteria 1525
184 Ga0307412_10033772 3300031911 Bacteria 3254
185 Ga0307416_100034673 3300032002 Unclassified 3844
186 Ga0307414_10060677 3300032004 Bacteria 2676
187 Ga0307411_10099066 3300032005 Unclassified 2056
188 Ga0307415_100144686 3300032126 Bacteria 1820
189 Ga0373951_0002348 3300035091 Bacteria 4799
190 Ga0242422_00434 3300038699 Unclassified 2625
191 Ga0451576_1263355 3300045051 Unclassified 770
192 Ga0496104_0094588 3300048907 Unclassified 2859
193 Ga0496106_0122725 3300048909 Unclassified 2032
194 Ga0496112_0145079 3300048915 Bacteria 2342
195 Ga0496112_0553284 3300048915 Bacteria 1084
196 Ga0501296_001866 3300049519 Unclassified 2150
197 Ga0501298_021430 3300049521 Unclassified 1210
198 Ga0501299_004100 3300049522 Bacteria 2156
199 Ga0501038_0006479 3300049574 Bacteria 10835
200 Ga0501048_0166458 3300049582 Unclassified 1561
201 Ga0501072_0359030 3300049588 Bacteria 1157
202 Ga0501217_014114 3300049661 Bacteria 1801
203 Ga0501233_046304 3300049668 Bacteria 1040
204 Ga0501235_013890 3300049669 Bacteria 1774
205 Ga0501249_004206 3300049679 Bacteria 2919
206 Ga0501261_041601 3300049690 Bacteria 727
207 Ga0501268_006670 3300049765 Bacteria 1702
208 nmdc:mga05p37_180901_c1 3300050507 Unclassified 2565
209 nmdc:mga0qj67_35018_c1 3300050509 Unclassified 3924
210 nmdc:mga08y16_195931_c1 3300050511 Bacteria 2094
211 nmdc:mga08y16_245421_c1 3300050511 Unclassified 1850
212 nmdc:mga08y16_28495_c1 3300050511 Bacteria 5888
213 nmdc:mga0n895_24224_c1 3300050512 Bacteria 5718
214 nmdc:mga0n895_68861_c1 3300050512 Bacteria 3506
215 nmdc:mga08x19_2638_c1 3300050514 Bacteria 10844
216 nmdc:mga0a205_123699_c1 3300050515 Bacteria 2487
217 nmdc:mga0a205_133936_c1 3300050515 Unclassified 2378
218 nmdc:mga0a205_49775_c1 3300050515 Unclassified 4046
219 nmdc:mga0a205_64785_c1 3300050515 Bacteria 3530
220 Ga0501084_0077221 3300054114 Bacteria 2792
221 Ga0501082_0241409 3300060353 Bacteria 1572
222 Ga0530510_0042358 3300061734 Unclassified 3289
223 Ga0395901_0277058
224 SwRhRL2b_contig_3750633
225 MBSR1b_contig_11008244
226 rootL2_10059827
227 Ga0065714_10064448
228 Ga0065704_10072822
229 Ga0065712_10000125
230 Ga0065715_10090650
231 Ga0065715_10092184
232 Ga0065715_10453452
233 Ga0065707_10148301
234 Ga0070670_100000176
235 Ga0070670_100028090
236 Ga0068869_100084054
237 Ga0068869_100472619
238 Ga0070682_100011314
239 Ga0070692_10026261
240 Ga0070692_10034088
241 Ga0070692_10091064
242 Ga0070705_100205886
243 Ga0070700_100218170
244 Ga0070694_100011620
245 Ga0070694_100173358
246 Ga0070681_10055104
247 Ga0068867_100106631
248 Ga0068867_100152020
249 Ga0068867_100368711
250 Ga0070706_100000032
251 Ga0070697_100100513
252 Ga0070697_100104105
253 Ga0068853_100048243
254 Ga0070672_100273816
255 Ga0070695_100069633
256 Ga0070695_100105567
257 Ga0070696_100418082
258 Ga0070696_100514672
259 Ga0070693_100009853
260 Ga0070693_100025545
261 Ga0068855_100234834
262 Ga0068855_100521084
263 Ga0068857_100139357
264 Ga0068857_100495730
265 Ga0068854_100173816
266 Ga0070702_100011798
267 Ga0070702_100105026
268 Ga0068859_100120300
269 Ga0068859_100357318
270 Ga0068859_100619467
271 Ga0068864_100013599
272 Ga0068864_100014050
273 Ga0068864_100016146
274 Ga0068864_100113017
275 Ga0068864_100335884
276 Ga0068861_100038072
277 Ga0068861_100062398
278 Ga0068861_100137655
279 Ga0068851_10002829
280 Ga0068870_10108784
281 Ga0068870_10157608
282 Ga0068863_100030002
283 Ga0068863_100253922
284 Ga0068863_100277076
285 Ga0068858_100024313
286 Ga0068858_100208396
287 Ga0068858_100247249
288 Ga0068860_100005822
289 Ga0068860_100042425
290 Ga0068860_100065357
291 Ga0068860_100112199
292 Ga0068860_100426812
293 Ga0068862_100027326
294 Ga0081539_10001119
295 Ga0070716_100054935
296 Ga0070716_100208956
297 Ga0097621_100003512
298 Ga0097621_100166345
299 Ga0068871_100021002
300 Ga0068871_100107822
301 Ga0075428_100025157
302 Ga0075430_100022491
303 Ga0075430_100152326
304 Ga0075431_100051667
305 Ga0075433_10007988
306 Ga0075433_10037796
307 Ga0075433_10366965
308 Ga0075434_100031412
309 Ga0075434_100037950
310 Ga0075434_100067094
311 Ga0075436_100003440
312 Ga0097620_100120300
313 Ga0097620_100357308
314 Ga0097620_100619545
315 Ga0111539_10029824
316 Ga0111539_10185747
317 Ga0111539_10639304
318 Ga0114129_10039360
319 Ga0114129_10434334
320 Ga0114129_10574913
321 Ga0105243_10014401
322 Ga0105243_10276881
323 Ga0105243_10295631
324 Ga0105243_10829785
325 Ga0105241_10042367
326 Ga0105241_10168107
327 Ga0105241_10201886
328 Ga0105241_10297957
329 Ga0105241_10334987
330 Ga0105242_10128596
331 Ga0105242_10140146
332 Ga0105248_10025916
333 Ga0105248_10162196
334 Ga0105237_10001297
335 Ga0105238_10005166
336 Ga0105238_10041447
337 Ga0105246_10115623
338 Ga0105246_10252485
339 Ga0157373_10010863
340 Ga0157378_10294744
341 Ga0157378_10550011
342 Ga0163162_10022912
343 Ga0163162_10030049
344 Ga0163162_10070457
345 Ga0157372_10051026
346 Ga0163163_10000511
347 Ga0163163_10013574
348 Ga0157380_10167190
349 Ga0157379_10097200
350 Ga0207653_10014142
351 Ga0207647_10003798
352 Ga0207645_10302188
353 Ga0207643_10004009
354 Ga0207643_10006857
355 Ga0207643_10089273
356 Ga0207684_10000065
357 Ga0207654_10067290
358 Ga0207654_10252156
359 Ga0207707_10076771
360 Ga0207671_10007869
361 Ga0207660_10082331
362 Ga0207694_10005051
363 Ga0207694_10057333
364 Ga0207650_10000080
365 Ga0207650_10047191
366 Ga0207686_10077178
367 Ga0207709_10003405
368 Ga0207709_10111477
369 Ga0207670_10010283
370 Ga0207665_10354815
371 Ga0207711_10031337
372 Ga0207711_10565644
373 Ga0207689_10045986
374 Ga0207689_10098323
375 Ga0207651_10183885
376 Ga0207712_10003439
377 Ga0207640_10050389
378 Ga0207703_10213128
379 Ga0207639_10032882
380 Ga0207708_10033630
381 Ga0207708_10055950
382 Ga0207708_10063446
383 Ga0207641_10076509
384 Ga0207648_10130885
385 Ga0207648_10140366
386 Ga0207648_10253717
387 Ga0207676_10006417
388 Ga0207676_10125237
389 Ga0207676_10421762
390 Ga0207676_10456172
391 Ga0207676_10503510
392 Ga0207674_10060838
393 Ga0207674_10225920
394 Ga0207674_10425418
395 Ga0207675_100056373
396 Ga0207675_100441499
397 Ga0207675_100484287
398 Ga0207428_10013727
399 Ga0207428_10445969
400 Ga0268265_10073093
401 Ga0268265_10607138
402 Ga0268264_10043043
403 Ga0268264_10071704
404 Ga0268264_10118865
405 Ga0268264_10294720
406 Ga0307412_10033772
407 Ga0307416_100034673
408 Ga0307414_10060677
409 Ga0307411_10099066
410 Ga0307415_100144686
411 Ga0373951_0002348
412 Ga0242422_00434
413 Ga0451576_1263355
414 Ga0496104_0094588
415 Ga0496106_0122725
416 Ga0496112_0145079
417 Ga0496112_0553284
418 Ga0501296_001866
419 Ga0501298_021430
420 Ga0501299_004100
421 Ga0501038_0006479
422 Ga0501048_0166458
423 Ga0501072_0359030
424 Ga0501217_014114
425 Ga0501233_046304
426 Ga0501235_013890
427 Ga0501249_004206
428 Ga0501261_041601
429 Ga0501268_006670
430 nmdc:mga05p37_180901_c1
431 nmdc:mga0qj67_35018_c1
432 nmdc:mga08y16_195931_c1
433 nmdc:mga08y16_245421_c1
434 nmdc:mga08y16_28495_c1
435 nmdc:mga0n895_24224_c1
436 nmdc:mga0n895_68861_c1
437 nmdc:mga08x19_2638_c1
438 nmdc:mga0a205_123699_c1
439 nmdc:mga0a205_133936_c1
440 nmdc:mga0a205_49775_c1
441 nmdc:mga0a205_64785_c1
442 Ga0501084_0077221
443 Ga0501082_0241409
444 Ga0530510_0042358

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14559

TPR_19

Tetratricopeptide repeat

203

261

0.96

PF16811

TAtT

TRAP transporter T-component

88

279

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.9297 178 241
4cgw-assembly1.cif.gz_A second tpr of spaghetti (rpap3) bound to hsp90 peptide srmeevd 0.8756 41 171
7bev-assembly1.cif.gz_A nmr structure of an optimized version of the first tpr domain of the human spag1 protein 0.8749 45 186
4cgw-assembly2.cif.gz_B second tpr of spaghetti (rpap3) bound to hsp90 peptide srmeevd 0.8722 44 171
4cgv-assembly3.cif.gz_C first tpr of spaghetti (rpap3) bound to hsp90 peptide srmeevd 0.8685 46 186
ID Description Score Start End Superfamily
af_Q58350_225_318_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9183 155 241 1.25.40.10
af_Q55FY1_358_430_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9115 197 241 1.25.40.10
af_K7LJ63_308_399_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9007 48 146 1.25.40.10
af_Q8S8L9_303_392_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9006 48 146 1.25.40.10
af_Q4DYD9_367_479_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8987 49 182 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A0D2J0Q2-F1-model_v4 Uncharacterized protein 0.941 44 268
AF-A0A7C3EEW3-F1-model_v4 Tetratricopeptide repeat protein 0.9407 87 272
AF-A0A2V8E0D5-F1-model_v4 Uncharacterized protein 0.9344 124 244
AF-A0A7V5K631-F1-model_v4 Tetratricopeptide repeat protein 0.9338 54 268
AF-A0A1F9IKP5-F1-model_v4 Tetratricopeptide repeat protein 0.9307 86 271

Map