F334315

General Info

Members Datasets Scaffolds Average Seq Length
222 128 444 522

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10003203|Ga0075364_100032032
Length 544
Sequence MAELTINTSDITAALQKNLSDFKPEVETKQVGRILEVGDGIARVSGLPDASVNELLEFEGGTLGLALNLDEESIGAVILGDGEHAAQVEEGQTVRATGRILDVPVGDGVLGRVINALGEPIDGKGPLVGTQLRRMEIQAPGLTGRKPVHEPLQTGIKSIDAMTPIGRGQRQLVIGDRKTGKTTVCIDTILAQKGQGVKCIYVAVGLKGSTVAQTVNTLTENGAMDYTVVVVAPASDPAPFKYLAPYAGCAMGQHWMDNGEHALVVYDDLSKQAEAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGAGSLTALPIIETKAGDVSAYIPTNVISITDGQVYLQDDLFKSGVRPAVDVGISVSRVGGAAQIKAMRKVSGTLKLDLAQFRELEAFASFGSELDKISAAQLERGYRLTELLKQPLNSPMPVEEQIISVFAGTNGYLDNLPVEDVKRYETELLDFVRARKPELLEQIRTTGELPDGVEAAVKAFSQEFSPSGHVASAPDATDEGDAELIAAGGRAEATLPEHEVDREEDE

Samples

Sample ID Description Type Environment
1 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
4 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
5 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
6 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
7 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
10 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
22 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
23 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
24 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
25 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
37 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
41 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
42 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
43 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
44 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
47 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
49 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
50 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
51 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
52 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
53 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
54 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
55 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
56 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
57 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
58 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
59 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
62 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
63 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
64 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
67 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
71 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
72 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
73 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
74 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
75 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
76 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
81 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
82 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
83 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
84 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
98 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
99 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
100 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
105 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
106 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
107 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
108 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
112 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
113 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
114 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
115 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
122 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
123 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
124 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
125 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
126 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
127 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
128 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.55
Metatranscriptomes 0.45
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.11
Nodule 0
Rhizoplane 7.21
Rhizosphere 79.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075364_10003203 3300006051 Bacteria 9276
2 Ga0070680_100004833 3300005336 Bacteria 10144
3 Ga0070671_100008617 3300005355 Bacteria 8177
4 Ga0070671_100013725 3300005355 Bacteria 6534
5 Ga0070679_100050213 3300005530 Bacteria 4155
6 Ga0070665_100053795 3300005548 Bacteria 4037
7 Ga0068863_100118960 3300005841 Bacteria 2518
8 Ga0068858_100013307 3300005842 Bacteria 7759
9 Ga0081455_10006564 3300005937 Bacteria 12449
10 Ga0081455_10008130 3300005937 Bacteria 10944
11 Ga0081455_10015425 3300005937 Bacteria 7423
12 Ga0081455_10032483 3300005937 Bacteria 4702
13 Ga0081538_10000319 3300005981 Bacteria 54989
14 Ga0081538_10004793 3300005981 Bacteria 12355
15 Ga0075363_100010410 3300006048 Bacteria 4417
16 Ga0075363_100018731 3300006048 Bacteria 3453
17 Ga0075363_100030836 3300006048 Bacteria 2777
18 Ga0075364_10053374 3300006051 Bacteria 2642
19 Ga0075367_10014007 3300006178 Bacteria 4331
20 Ga0075428_100008954 3300006844 Bacteria 11106
21 Ga0075428_100047044 3300006844 Bacteria 4739
22 Ga0075430_100010771 3300006846 Bacteria 7750
23 Ga0075430_100024024 3300006846 Bacteria 5190
24 Ga0075430_100025419 3300006846 Bacteria 5038
25 Ga0075431_100000612 3300006847 Bacteria 30144
26 Ga0075431_100006074 3300006847 Bacteria 11975
27 Ga0075431_100115314 3300006847 Bacteria 2773
28 Ga0075429_100006257 3300006880 Bacteria 10306
29 Ga0075429_100021738 3300006880 Bacteria 5563
30 Ga0075436_100011155 3300006914 Bacteria 6162
31 Ga0111539_10031462 3300009094 Bacteria 6445
32 Ga0114129_10016666 3300009147 Bacteria 10464
33 Ga0114129_10066710 3300009147 Bacteria 5019
34 Ga0114129_10092953 3300009147 Bacteria 4179
35 Ga0114129_10195368 3300009147 Bacteria 2744
36 Ga0105243_10129125 3300009148 Bacteria 2142
37 Ga0105248_10038854 3300009177 Bacteria 5328
38 Ga0157378_10049277 3300013297 Bacteria 3747
39 Ga0157380_10019173 3300014326 Bacteria 5095
40 Ga0163161_10009926 3300017792 Bacteria 6594
41 Ga0213876_10007087 3300021384 Bacteria 6107
42 Ga0207642_10015414 3300025899 Bacteria 2847
43 Ga0207688_10026410 3300025901 Bacteria 3192
44 Ga0207684_10049763 3300025910 Bacteria 3554
45 Ga0207660_10006186 3300025917 Bacteria 7777
46 Ga0207652_10020081 3300025921 Bacteria 5501
47 Ga0207646_10083860 3300025922 Bacteria 2850
48 Ga0207687_10051507 3300025927 Bacteria 2870
49 Ga0207644_10005852 3300025931 Bacteria 8012
50 Ga0207703_10004895 3300026035 Bacteria 10887
51 Ga0207708_10025856 3300026075 Bacteria 4442
52 Ga0207648_10018524 3300026089 Bacteria 6301
53 Ga0207428_10072655 3300027907 Bacteria 2700
54 Ga0268266_10096915 3300028379 Bacteria 2594
55 Ga0265338_10029479 3300028800 Bacteria 5439
56 Ga0265327_10000252 3300031251 Bacteria 106339
57 Ga0265327_10002803 3300031251 Bacteria 17598
58 Ga0265327_10006142 3300031251 Bacteria 9718
59 Ga0316575_10002303 3300031665 Bacteria 6392
60 Ga0316579_10010632 3300031691 Bacteria 3896
61 Ga0316576_10005282 3300031727 Bacteria 7866
62 Ga0316576_10006495 3300031727 Bacteria 7286
63 Ga0316576_10049548 3300031727 Bacteria 3051
64 Ga0316576_10052125 3300031727 Bacteria 2979
65 Ga0316578_10016592 3300031728 Bacteria 3989
66 Ga0316578_10065181 3300031728 Bacteria 2151
67 Ga0316577_10019818 3300031733 Bacteria 3726
68 Ga0307409_100003770 3300031995 Bacteria 8342
69 Ga0307409_100006795 3300031995 Bacteria 6769
70 Ga0316580_10010370 3300032139 Bacteria 2815
71 Ga0316593_10002317 3300032168 Bacteria 4476
72 Ga0373928_0000953 3300035084 Bacteria 5701
73 Ga0373929_0003671 3300035085 Bacteria 2755
74 Ga0373932_0001402 3300035112 Bacteria 6754
75 Ga0316574_0001070 3300035398 Bacteria 12492
76 Ga0316574_0005901 3300035398 Bacteria 6569
77 Ga0316574_0047221 3300035398 Bacteria 2672
78 Ga0316574_0068753 3300035398 Bacteria 2234
79 Ga0373931_0000010 3300035691 Bacteria 334069
80 Ga0373927_0041657 3300035695 Bacteria 2978
81 Ga0316582_0021579 3300036647 Bacteria 3809
82 Ga0316582_0024556 3300036647 Bacteria 3608
83 Ga0316584_0003705 3300036712 Bacteria 10000
84 Ga0316584_0015932 3300036712 Bacteria 5384
85 Ga0316584_0017235 3300036712 Bacteria 5188
86 Ga0436364_0204660 3300037853 Bacteria 3692
87 Ga0436364_1330176 3300037853 Bacteria 3025
88 Ga0400485_13617 3300038735 Bacteria 6975
89 Ga0400483_007036 3300039062 Bacteria 33110
90 Ga0400483_010748 3300039062 Bacteria 8501
91 Ga0400483_077252 3300039062 Bacteria 9879
92 Ga0400483_220481 3300039062 Bacteria 22518
93 Ga0400483_258026 3300039062 Bacteria 11670
94 Ga0400489_54171 3300039093 Bacteria 6769
95 Ga0436365_1190208 3300039437 Bacteria 9601
96 Ga0436360_0209666 3300039438 Bacteria 2265
97 Ga0439448_0004089 3300042005 Bacteria 4104
98 Ga0439450_001029 3300042008 Bacteria 3925
99 Ga0439463_002420 3300042016 Bacteria 4756
100 Ga0451577_0000003 3300042876 Bacteria 921850
101 Ga0451577_0001613 3300042876 Bacteria 29346
102 Ga0451577_0219504 3300042876 Bacteria 1718
103 Ga0439440_0001606 3300042993 Bacteria 4146
104 Ga0453683_0000006 3300044673 Bacteria 586638
105 Ga0453683_0109608 3300044673 Bacteria 1736
106 Ga0453684_0000018 3300044712 Bacteria 921850
107 Ga0453684_0000042 3300044712 Bacteria 682980
108 Ga0453684_0001477 3300044712 Bacteria 66338
109 Ga0453684_0006007 3300044712 Bacteria 23513
110 Ga0451576_0000370 3300045051 Bacteria 106737
111 Ga0451576_0001900 3300045051 Bacteria 33542
112 Ga0451576_0087493 3300045051 Bacteria 3240
113 Ga0451576_0124421 3300045051 Bacteria 2686
114 Ga0466958_0085265 3300045836 Bacteria 1949
115 Ga0495634_0001886 3300046642 Bacteria 18012
116 Ga0495658_0074322 3300046683 Bacteria 1980
117 Ga0495613_0000357 3300046689 Bacteria 40386
118 Ga0495676_0087612 3300047321 Bacteria 2339
119 Ga0495676_0116753 3300047321 Bacteria 1948
120 Ga0496101_0085790 3300048904 Bacteria 2334
121 Ga0496101_0125979 3300048904 Bacteria 1941
122 Ga0496102_0167286 3300048905 Bacteria 2069
123 Ga0496104_0017186 3300048907 Bacteria 6580
124 Ga0496104_0028799 3300048907 Bacteria 5148
125 Ga0496104_0136899 3300048907 Bacteria 2353
126 Ga0496104_0147709 3300048907 Bacteria 2258
127 Ga0496104_0245833 3300048907 Bacteria 1702
128 Ga0496105_0142307 3300048908 Bacteria 1974
129 Ga0496108_0021442 3300048911 Bacteria 5312
130 Ga0496108_0093363 3300048911 Bacteria 2560
131 Ga0496110_0050980 3300048913 Bacteria 3636
132 Ga0496111_0010185 3300048914 Bacteria 6296
133 Ga0496111_0017718 3300048914 Bacteria 4926
134 Ga0496112_0052132 3300048915 Bacteria 4015
135 Ga0496115_0033012 3300048918 Bacteria 4085
136 Ga0501031_0019833 3300049568 Bacteria 4382
137 Ga0501032_0002818 3300049569 Bacteria 13524
138 Ga0501033_0000342 3300049570 Bacteria 44372
139 Ga0501033_0008531 3300049570 Bacteria 7930
140 Ga0501034_0000986 3300049571 Bacteria 40824
141 Ga0501034_0004559 3300049571 Bacteria 15367
142 Ga0501034_0009820 3300049571 Bacteria 10007
143 Ga0501034_0062699 3300049571 Bacteria 3733
144 Ga0501036_0015521 3300049572 Bacteria 6363
145 Ga0501036_0072512 3300049572 Bacteria 2911
146 Ga0501037_0008590 3300049573 Bacteria 7492
147 Ga0501039_0019545 3300049575 Bacteria 5193
148 Ga0501039_0021428 3300049575 Bacteria 4958
149 Ga0501040_0000881 3300049576 Bacteria 18859
150 Ga0501040_0001151 3300049576 Bacteria 16823
151 Ga0501040_0053138 3300049576 Bacteria 2774
152 Ga0501040_0077073 3300049576 Bacteria 2306
153 Ga0501041_0047509 3300049577 Bacteria 2613
154 Ga0501042_0030445 3300049578 Bacteria 3811
155 Ga0501043_0040476 3300049579 Bacteria 3663
156 Ga0501046_0026315 3300049580 Bacteria 4751
157 Ga0501048_0021691 3300049582 Bacteria 4700
158 Ga0501048_0030208 3300049582 Bacteria 3921
159 Ga0501068_0000178 3300049584 Bacteria 29882
160 Ga0501071_0000883 3300049587 Bacteria 16220
161 Ga0501071_0027560 3300049587 Bacteria 3998
162 Ga0501071_0106099 3300049587 Bacteria 2074
163 Ga0501072_0003644 3300049588 Bacteria 11597
164 Ga0501072_0084406 3300049588 Bacteria 2518
165 Ga0501072_0135473 3300049588 Bacteria 1963
166 Ga0501073_0000128 3300049589 Bacteria 49589
167 Ga0501073_0000908 3300049589 Bacteria 21287
168 Ga0501074_0000373 3300049590 Bacteria 26438
169 Ga0501075_0014899 3300049591 Bacteria 5576
170 Ga0501075_0031718 3300049591 Bacteria 3924
171 Ga0501076_0013023 3300049592 Bacteria 6227
172 Ga0501076_0023190 3300049592 Bacteria 4781
173 Ga0501076_0026000 3300049592 Bacteria 4531
174 Ga0501077_0003498 3300049593 Bacteria 9430
175 Ga0501079_0004954 3300049741 Bacteria 9873
176 Ga0501079_0017116 3300049741 Bacteria 5536
177 Ga0501079_0023641 3300049741 Bacteria 4716
178 Ga0501079_0031371 3300049741 Bacteria 4084
179 Ga0501080_0034553 3300049742 Bacteria 4721
180 Ga0501080_0062427 3300049742 Bacteria 3468
181 Ga0501081_0010734 3300049743 Bacteria 5980
182 Ga0501083_0008307 3300049744 Bacteria 7341
183 Ga0501083_0065460 3300049744 Bacteria 2421
184 Ga0501035_0021338 3300049822 Bacteria 5954
185 Ga0501035_0056039 3300049822 Bacteria 3519
186 Ga0501044_0001330 3300049823 Bacteria 29044
187 Ga0501044_0005868 3300049823 Bacteria 13604
188 Ga0501045_0004618 3300049824 Bacteria 9510
189 Ga0501045_0021027 3300049824 Bacteria 4665
190 nmdc:mga03n38_15041_c1 3300050490 Bacteria 2981
191 nmdc:mga00v17_1302_c1 3300050491 Bacteria 13080
192 nmdc:mga00v17_22414_c1 3300050491 Bacteria 3644
193 nmdc:mga00v17_2865_c1 3300050491 Bacteria 8837
194 nmdc:mga00v17_54199_c1 3300050491 Bacteria 2446
195 nmdc:mga0yw44_20661_c1 3300050492 Bacteria 3659
196 nmdc:mga06z11_37100_c1 3300050494 Bacteria 2411
197 nmdc:mga06z11_55281_c1 3300050494 Bacteria 2049
198 nmdc:mga05p37_249042_c1 3300050507 Bacteria 2132
199 nmdc:mga05p37_58961_c1 3300050507 Bacteria 4728
200 nmdc:mga05p37_96755_c1 3300050507 Bacteria 3637
201 nmdc:mga09592_3419_c1 3300050508 Bacteria 12822
202 nmdc:mga09592_84467_c1 3300050508 Bacteria 2707
203 nmdc:mga0qj67_10560_c1 3300050509 Bacteria 6898
204 nmdc:mga06r32_144_c1 3300050510 Bacteria 53470
205 nmdc:mga06r32_60560_c1 3300050510 Bacteria 3644
206 nmdc:mga06r32_72152_c1 3300050510 Bacteria 3343
207 nmdc:mga08y16_30798_c1 3300050511 Bacteria 5643
208 nmdc:mga08y16_89074_c1 3300050511 Bacteria 3216
209 nmdc:mga08x19_15807_c1 3300050514 Bacteria 4595
210 Ga0500635_0002784 3300053080 Bacteria 4340
211 Ga0500566_0001020 3300053094 Bacteria 16145
212 Ga0500568_0042109 3300053139 Bacteria 1831
213 Ga0500616_0000457 3300053153 Bacteria 53510
214 Ga0501084_0003125 3300054114 Bacteria 13410
215 Ga0501084_0013669 3300054114 Bacteria 6719
216 Ga0501084_0018794 3300054114 Bacteria 5754
217 Ga0501084_0026754 3300054114 Bacteria 4817
218 Ga0501084_0056482 3300054114 Bacteria 3284
219 Ga0501082_0010060 3300060353 Bacteria 8151
220 Ga0501082_0061248 3300060353 Bacteria 3240
221 Ga0530510_0003423 3300061734 Bacteria 10912
222 Ga0530510_0028650 3300061734 Bacteria 3993
223 Ga0075364_10003203
224 Ga0070680_100004833
225 Ga0070671_100008617
226 Ga0070671_100013725
227 Ga0070679_100050213
228 Ga0070665_100053795
229 Ga0068863_100118960
230 Ga0068858_100013307
231 Ga0081455_10006564
232 Ga0081455_10008130
233 Ga0081455_10015425
234 Ga0081455_10032483
235 Ga0081538_10000319
236 Ga0081538_10004793
237 Ga0075363_100010410
238 Ga0075363_100018731
239 Ga0075363_100030836
240 Ga0075364_10053374
241 Ga0075367_10014007
242 Ga0075428_100008954
243 Ga0075428_100047044
244 Ga0075430_100010771
245 Ga0075430_100024024
246 Ga0075430_100025419
247 Ga0075431_100000612
248 Ga0075431_100006074
249 Ga0075431_100115314
250 Ga0075429_100006257
251 Ga0075429_100021738
252 Ga0075436_100011155
253 Ga0111539_10031462
254 Ga0114129_10016666
255 Ga0114129_10066710
256 Ga0114129_10092953
257 Ga0114129_10195368
258 Ga0105243_10129125
259 Ga0105248_10038854
260 Ga0157378_10049277
261 Ga0157380_10019173
262 Ga0163161_10009926
263 Ga0213876_10007087
264 Ga0207642_10015414
265 Ga0207688_10026410
266 Ga0207684_10049763
267 Ga0207660_10006186
268 Ga0207652_10020081
269 Ga0207646_10083860
270 Ga0207687_10051507
271 Ga0207644_10005852
272 Ga0207703_10004895
273 Ga0207708_10025856
274 Ga0207648_10018524
275 Ga0207428_10072655
276 Ga0268266_10096915
277 Ga0265338_10029479
278 Ga0265327_10000252
279 Ga0265327_10002803
280 Ga0265327_10006142
281 Ga0316575_10002303
282 Ga0316579_10010632
283 Ga0316576_10005282
284 Ga0316576_10006495
285 Ga0316576_10049548
286 Ga0316576_10052125
287 Ga0316578_10016592
288 Ga0316578_10065181
289 Ga0316577_10019818
290 Ga0307409_100003770
291 Ga0307409_100006795
292 Ga0316580_10010370
293 Ga0316593_10002317
294 Ga0373928_0000953
295 Ga0373929_0003671
296 Ga0373932_0001402
297 Ga0316574_0001070
298 Ga0316574_0005901
299 Ga0316574_0047221
300 Ga0316574_0068753
301 Ga0373931_0000010
302 Ga0373927_0041657
303 Ga0316582_0021579
304 Ga0316582_0024556
305 Ga0316584_0003705
306 Ga0316584_0015932
307 Ga0316584_0017235
308 Ga0436364_0204660
309 Ga0436364_1330176
310 Ga0400485_13617
311 Ga0400483_007036
312 Ga0400483_010748
313 Ga0400483_077252
314 Ga0400483_220481
315 Ga0400483_258026
316 Ga0400489_54171
317 Ga0436365_1190208
318 Ga0436360_0209666
319 Ga0439448_0004089
320 Ga0439450_001029
321 Ga0439463_002420
322 Ga0451577_0000003
323 Ga0451577_0001613
324 Ga0451577_0219504
325 Ga0439440_0001606
326 Ga0453683_0000006
327 Ga0453683_0109608
328 Ga0453684_0000018
329 Ga0453684_0000042
330 Ga0453684_0001477
331 Ga0453684_0006007
332 Ga0451576_0000370
333 Ga0451576_0001900
334 Ga0451576_0087493
335 Ga0451576_0124421
336 Ga0466958_0085265
337 Ga0495634_0001886
338 Ga0495658_0074322
339 Ga0495613_0000357
340 Ga0495676_0087612
341 Ga0495676_0116753
342 Ga0496101_0085790
343 Ga0496101_0125979
344 Ga0496102_0167286
345 Ga0496104_0017186
346 Ga0496104_0028799
347 Ga0496104_0136899
348 Ga0496104_0147709
349 Ga0496104_0245833
350 Ga0496105_0142307
351 Ga0496108_0021442
352 Ga0496108_0093363
353 Ga0496110_0050980
354 Ga0496111_0010185
355 Ga0496111_0017718
356 Ga0496112_0052132
357 Ga0496115_0033012
358 Ga0501031_0019833
359 Ga0501032_0002818
360 Ga0501033_0000342
361 Ga0501033_0008531
362 Ga0501034_0000986
363 Ga0501034_0004559
364 Ga0501034_0009820
365 Ga0501034_0062699
366 Ga0501036_0015521
367 Ga0501036_0072512
368 Ga0501037_0008590
369 Ga0501039_0019545
370 Ga0501039_0021428
371 Ga0501040_0000881
372 Ga0501040_0001151
373 Ga0501040_0053138
374 Ga0501040_0077073
375 Ga0501041_0047509
376 Ga0501042_0030445
377 Ga0501043_0040476
378 Ga0501046_0026315
379 Ga0501048_0021691
380 Ga0501048_0030208
381 Ga0501068_0000178
382 Ga0501071_0000883
383 Ga0501071_0027560
384 Ga0501071_0106099
385 Ga0501072_0003644
386 Ga0501072_0084406
387 Ga0501072_0135473
388 Ga0501073_0000128
389 Ga0501073_0000908
390 Ga0501074_0000373
391 Ga0501075_0014899
392 Ga0501075_0031718
393 Ga0501076_0013023
394 Ga0501076_0023190
395 Ga0501076_0026000
396 Ga0501077_0003498
397 Ga0501079_0004954
398 Ga0501079_0017116
399 Ga0501079_0023641
400 Ga0501079_0031371
401 Ga0501080_0034553
402 Ga0501080_0062427
403 Ga0501081_0010734
404 Ga0501083_0008307
405 Ga0501083_0065460
406 Ga0501035_0021338
407 Ga0501035_0056039
408 Ga0501044_0001330
409 Ga0501044_0005868
410 Ga0501045_0004618
411 Ga0501045_0021027
412 nmdc:mga03n38_15041_c1
413 nmdc:mga00v17_1302_c1
414 nmdc:mga00v17_22414_c1
415 nmdc:mga00v17_2865_c1
416 nmdc:mga00v17_54199_c1
417 nmdc:mga0yw44_20661_c1
418 nmdc:mga06z11_37100_c1
419 nmdc:mga06z11_55281_c1
420 nmdc:mga05p37_249042_c1
421 nmdc:mga05p37_58961_c1
422 nmdc:mga05p37_96755_c1
423 nmdc:mga09592_3419_c1
424 nmdc:mga09592_84467_c1
425 nmdc:mga0qj67_10560_c1
426 nmdc:mga06r32_144_c1
427 nmdc:mga06r32_60560_c1
428 nmdc:mga06r32_72152_c1
429 nmdc:mga08y16_30798_c1
430 nmdc:mga08y16_89074_c1
431 nmdc:mga08x19_15807_c1
432 Ga0500635_0002784
433 Ga0500566_0001020
434 Ga0500568_0042109
435 Ga0500616_0000457
436 Ga0501084_0003125
437 Ga0501084_0013669
438 Ga0501084_0018794
439 Ga0501084_0026754
440 Ga0501084_0056482
441 Ga0501082_0010060
442 Ga0501082_0061248
443 Ga0530510_0003423
444 Ga0530510_0028650

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00006

ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

155

370

0.99

PF00306

ATP-synt_ab_C

ATP synthase alpha/beta chain, C terminal domain

377

502

0.99

PF02874

ATP-synt_ab_N

ATP synthase alpha/beta family, beta-barrel domain

27

98

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hkk-assembly1.cif.gz_A caldalaklibacillus thermarum f1-atpase (wild type) 0.9728 24 496
8f2k-assembly1.cif.gz_A structure of yeast f1-atpase determined with 100 micromolar cruentaren a 0.9701 21 496
6q45-assembly1.cif.gz_C f1-atpase from fusobacterium nucleatum 0.9692 24 493
4xd7-assembly1.cif.gz_A structure of thermophilic f1-atpase inhibited by epsilon subunit 0.9681 21 478
6foc-assembly1.cif.gz_C f1-atpase from mycobacterium smegmatis 0.9681 25 496
ID Description Score Start End Superfamily
af_Q9XPJ9_41_108_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9791 24 88 2.40.30.20
af_A0A0G2K099_232_305_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9765 185 251 3.40.50.300
af_A0A2P2CLF9_96_382_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9756 91 368 3.40.50.300
4xd7B01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9645 25 91 2.40.30.20
af_P24487_408_536_1.20.150.20 Mainly Alpha;Up-down Bundle;Lysin;ATP synthase alpha/beta chain, C-terminal domain 0.9639 370 496 1.20.150.20
ID Description Score Start End GO Terms
AF-T1ACA0-F1-model_v4 ATP synthase F1 alpha subunit 1.004 176 272 GO:0005524
GO:0043531
GO:0045261
GO:0046933
AF-A0A349PS19-F1-model_v4 F0F1 ATP synthase subunit alpha 1.003 167 265 GO:0005524
GO:0043531
GO:0045261
GO:0046933
AF-U3RDH2-F1-model_v4 AtpA 1.001 136 242 GO:0005524
GO:0043531
GO:0045261
GO:0046933
AF-A0A090R0L5-F1-model_v4 ATP synthase alpha chain (EC 3.6.3.14) 0.9985 128 252 GO:0005524
GO:0016787
GO:0043531
GO:0045261
GO:0046933
AF-A0A699VLA5-F1-model_v4 F1-ATPase alpha subunit, mitochondrial 0.9946 105 267 GO:0005524
GO:0005743
GO:0043531
GO:0045261
GO:0046933

Map