F334305

General Info

Members Datasets Scaffolds Average Seq Length
222 156 220 453

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10000311|Ga0081539_1000031192
Length 468
Sequence MEGNARRNGEAVTLSRELVRAARAAAGTPLPEGVATAARLHFLDAIGVGLAAAASPIGAAYRAYAAEIARGGPASVFGQATGASAADAAMINGGLIHSLEFDDTHTGSIAHGSAVLAAAALAVAEAHNASGAALLGAYARSWEVLIRFGLAAPNGFHAKGFMSTSVTGTLVSALLAAELMGLDEDRTVAAIGIALSQASGVMEFLTNGSSVKSLHPGWAAHGGVVAAMLARAGMTGPETSLDGKHGLFRQFTGDEAAAGRFRALIGDLGREWHLPKAAYKFYPCCHYLHPFIEAAGKLAERGVRASDVERILCRVPQGEAPVICEPWERKQAPDTGHAARWSLPITVAARLVEGRIDLATFESPASSAVRELARRIQWEPLPGARFPERFEAELICQRQGGASETVRIDDVFGNHTRPPGSDAVLAKFRGNAARSLKADAVGALERAAQQLIAACDLNALSAALRQTN

Samples

Sample ID Description Type Environment
1 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
91 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
92 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
93 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
94 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
95 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
96 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
97 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
114 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
140 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
149 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
156 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.1
Metatranscriptomes 0
Isolates 0.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.7
Nodule 0.45
Rhizoplane 0.9
Rhizosphere 95.5
Stem 0
Stem Tuber 0
Unclassified 0.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25405J52794_10001745 3300003911 Unclassified 3628
2 Ga0065712_10071367 3300005290 Bacteria 5300
3 Ga0065715_10001410 3300005293 Bacteria 7744
4 Ga0065715_10121678 3300005293 Bacteria 2223
5 Ga0070670_100048979 3300005331 Bacteria 3635
6 Ga0070677_10000469 3300005333 Bacteria 13828
7 Ga0068869_100238960 3300005334 Unclassified 1447
8 Ga0070680_100035617 3300005336 Bacteria 4019
9 Ga0070680_100048948 3300005336 Unclassified 3445
10 Ga0070689_100150002 3300005340 Bacteria 1880
11 Ga0070691_10004701 3300005341 Bacteria 6210
12 Ga0070668_100019994 3300005347 Bacteria 5048
13 Ga0070668_100035973 3300005347 Bacteria 3779
14 Ga0070669_100003041 3300005353 Bacteria 12067
15 Ga0070669_100041732 3300005353 Unclassified 3337
16 Ga0070669_100133439 3300005353 Bacteria 1908
17 Ga0070675_100017770 3300005354 Bacteria 5657
18 Ga0070675_100050781 3300005354 Bacteria 3406
19 Ga0070671_100017219 3300005355 Bacteria 5850
20 Ga0070674_100003170 3300005356 Bacteria 9165
21 Ga0070673_100026845 3300005364 Bacteria 4259
22 Ga0070667_100029288 3300005367 Bacteria 4587
23 Ga0070700_100001277 3300005441 Bacteria 12494
24 Ga0070694_100062363 3300005444 Bacteria 2547
25 Ga0070678_100013792 3300005456 Bacteria 5076
26 Ga0070681_10252314 3300005458 Unclassified 1676
27 Ga0068867_100001824 3300005459 Bacteria 14842
28 Ga0068867_100015005 3300005459 Bacteria 5493
29 Ga0068867_100159167 3300005459 Unclassified 1780
30 Ga0070707_100061325 3300005468 Unclassified 3607
31 Ga0070698_100046226 3300005471 Bacteria 4451
32 Ga0070679_100055114 3300005530 Bacteria 3959
33 Ga0070679_100190935 3300005530 Unclassified 2017
34 Ga0070672_100063495 3300005543 Bacteria 2916
35 Ga0070695_100001854 3300005545 Bacteria 11929
36 Ga0070696_100010513 3300005546 Bacteria 6203
37 Ga0070696_100026897 3300005546 Bacteria 3916
38 Ga0068859_100058525 3300005617 Unclassified 3882
39 Ga0068864_100019365 3300005618 Bacteria 5691
40 Ga0068861_100002205 3300005719 Bacteria 12632
41 Ga0068862_100037425 3300005844 Bacteria 4113
42 Ga0068862_100140294 3300005844 Bacteria 2145
43 Ga0081455_10000052 3300005937 Bacteria 123035
44 Ga0081455_10000380 3300005937 Bacteria 58685
45 Ga0081538_10046541 3300005981 Bacteria 2674
46 Ga0081540_1001108 3300005983 Bacteria 23889
47 Ga0081539_10000311 3300005985 Bacteria 108579
48 Ga0075365_10010032 3300006038 Bacteria 5490
49 Ga0075364_10025410 3300006051 Bacteria 3770
50 Ga0075364_10050412 3300006051 Bacteria 2717
51 Ga0068871_100208734 3300006358 Unclassified 1689
52 Ga0075428_100016095 3300006844 Bacteria 8269
53 Ga0075430_100021742 3300006846 Bacteria 5452
54 Ga0075430_100053258 3300006846 Bacteria 3407
55 Ga0075431_100023044 3300006847 Bacteria 6365
56 Ga0075431_100028123 3300006847 Bacteria 5772
57 Ga0075433_10000461 3300006852 Bacteria 26442
58 Ga0075433_10077338 3300006852 Unclassified 2931
59 Ga0075433_10082076 3300006852 Bacteria 2843
60 Ga0075434_100005178 3300006871 Bacteria 11839
61 Ga0075434_100019674 3300006871 Bacteria 6533
62 Ga0075434_100049150 3300006871 Unclassified 4187
63 Ga0075429_100128808 3300006880 Bacteria 2214
64 Ga0068865_100004873 3300006881 Bacteria 8119
65 Ga0097620_100058526 3300006931 Unclassified 3882
66 Ga0075435_100199233 3300007076 Bacteria 1696
67 Ga0111539_10011944 3300009094 Bacteria 10888
68 Ga0111539_10046679 3300009094 Bacteria 5181
69 Ga0111539_10091656 3300009094 Bacteria 3571
70 Ga0111539_10142534 3300009094 Bacteria 2805
71 Ga0111539_10214719 3300009094 Unclassified 2241
72 Ga0114129_10184192 3300009147 Unclassified 2839
73 Ga0105243_10002272 3300009148 Bacteria 16120
74 Ga0105249_10005452 3300009553 Bacteria 10981
75 Ga0105246_10016918 3300011119 Bacteria 4628
76 Ga0157373_10044852 3300013100 Bacteria 3156
77 Ga0157378_10048125 3300013297 Unclassified 3791
78 Ga0163162_10035259 3300013306 Bacteria 4982
79 Ga0157375_10093149 3300013308 Bacteria 3078
80 Ga0163163_10011270 3300014325 Bacteria 8102
81 Ga0157380_10001685 3300014326 Bacteria 14599
82 Ga0163161_10024640 3300017792 Bacteria 4252
83 Ga0163161_10065631 3300017792 Bacteria 2649
84 Ga0207682_10000141 3300025893 Bacteria 32326
85 Ga0207707_10014120 3300025912 Bacteria 6960
86 Ga0207662_10190181 3300025918 Unclassified 1324
87 Ga0207657_10102768 3300025919 Bacteria 2370
88 Ga0207652_10013423 3300025921 Bacteria 6630
89 Ga0207652_10159133 3300025921 Unclassified 2024
90 Ga0207706_10007890 3300025933 Bacteria 9824
91 Ga0207709_10001268 3300025935 Bacteria 18057
92 Ga0207670_10090851 3300025936 Bacteria 2158
93 Ga0207704_10001881 3300025938 Bacteria 9396
94 Ga0207691_10002570 3300025940 Bacteria 17732
95 Ga0207691_10005743 3300025940 Bacteria 12003
96 Ga0207691_10043388 3300025940 Bacteria 4145
97 Ga0207651_10083952 3300025960 Bacteria 2305
98 Ga0207651_10207503 3300025960 Bacteria 1575
99 Ga0207712_10007525 3300025961 Bacteria 6878
100 Ga0207658_10209419 3300025986 Bacteria 1633
101 Ga0207677_10028421 3300026023 Unclassified 3536
102 Ga0207708_10007639 3300026075 Bacteria 8001
103 Ga0207702_10100149 3300026078 Bacteria 2556
104 Ga0207648_10001605 3300026089 Bacteria 24758
105 Ga0207648_10002885 3300026089 Bacteria 18209
106 Ga0207676_10014841 3300026095 Bacteria 5612
107 Ga0207675_100002689 3300026118 Bacteria 17541
108 Ga0207683_10001178 3300026121 Bacteria 23644
109 Ga0207683_10006748 3300026121 Bacteria 9820
110 Ga0209971_1004374 3300027682 Bacteria 3357
111 Ga0209966_1007159 3300027695 Bacteria 1948
112 Ga0207428_10020973 3300027907 Bacteria 5539
113 Ga0207428_10145211 3300027907 Unclassified 1808
114 Ga0268265_10001523 3300028380 Bacteria 19332
115 Ga0307408_100026754 3300031548 Bacteria 3967
116 Ga0307410_10013538 3300031852 Bacteria 4763
117 Ga0307412_10093119 3300031911 Bacteria 2113
118 Ga0307414_10002471 3300032004 Bacteria 9688
119 Ga0307415_100034209 3300032126 Viruses 3306
120 Ga0373926_0001571 3300035083 Bacteria 7017
121 Ga0373940_0010440 3300035088 Unclassified 2183
122 Ga0373944_0005377 3300035089 Bacteria 3371
123 Ga0373949_0002129 3300035090 Bacteria 5206
124 Ga0373932_0008088 3300035112 Unclassified 2510
125 Ga0373936_0000086 3300035113 Bacteria 34644
126 Ga0373945_0001616 3300035116 Bacteria 6908
127 Ga0373946_0001101 3300035171 Bacteria 9326
128 Ga0373931_0113892 3300035691 Unclassified 1538
129 Ga0373947_0000763 3300035725 Bacteria 19282
130 Ga0373947_0023066 3300035725 Unclassified 3617
131 Ga0373937_0181339 3300036401 Bacteria 1977
132 Ga0373925_0004544 3300037068 Bacteria 10484
133 Ga0436361_0171090 3300039447 Bacteria 4043
134 Ga0451576_0002244 3300045051 Bacteria 29629
135 Ga0451576_0462337 3300045051 Unclassified 1332
136 Ga0495580_0003335 3300046472 Bacteria 13727
137 Ga0495639_0025931 3300046475 Unclassified 2587
138 Ga0495628_0015852 3300046516 Bacteria 6291
139 Ga0495630_0053208 3300046517 Unclassified 3031
140 Ga0495640_0073159 3300046533 Bacteria 2295
141 Ga0495586_0026708 3300046535 Unclassified 3090
142 Ga0495588_0029211 3300046674 Bacteria 2765
143 Ga0495657_0077065 3300046675 Unclassified 2164
144 Ga0495658_0026454 3300046683 Bacteria 3110
145 Ga0495624_0071418 3300046690 Unclassified 2160
146 Ga0495685_018225 3300047447 Unclassified 2408
147 Ga0496104_0287772 3300048907 Unclassified 1556
148 Ga0496113_0232794 3300048916 Bacteria 1469
149 Ga0501032_0015128 3300049569 Bacteria 5449
150 Ga0501037_0007166 3300049573 Bacteria 8152
151 Ga0501039_0101130 3300049575 Bacteria 2250
152 Ga0501040_0012638 3300049576 Bacteria 5537
153 Ga0501041_0023722 3300049577 Unclassified 3678
154 Ga0501041_0035405 3300049577 Bacteria 3024
155 Ga0501043_0117406 3300049579 Unclassified 2087
156 Ga0501046_0054395 3300049580 Bacteria 3149
157 Ga0501047_0213267 3300049581 Unclassified 1789
158 Ga0501070_0005805 3300049586 Bacteria 10532
159 Ga0501070_0033544 3300049586 Bacteria 4296
160 Ga0501070_0174710 3300049586 Bacteria 1769
161 Ga0501071_0037990 3300049587 Unclassified 3439
162 Ga0501072_0067055 3300049588 Bacteria 2831
163 Ga0501072_0179108 3300049588 Unclassified 1691
164 Ga0501073_0041993 3300049589 Unclassified 3229
165 Ga0501074_0028414 3300049590 Unclassified 4053
166 Ga0501074_0181611 3300049590 Unclassified 1501
167 Ga0501075_0008946 3300049591 Bacteria 6988
168 Ga0501075_0041706 3300049591 Unclassified 3439
169 Ga0501076_0018527 3300049592 Bacteria 5309
170 Ga0501076_0079646 3300049592 Unclassified 2628
171 Ga0501076_0164702 3300049592 Bacteria 1807
172 Ga0501077_0031335 3300049593 Unclassified 3383
173 Ga0501077_0039374 3300049593 Bacteria 3011
174 Ga0501077_0053308 3300049593 Unclassified 2567
175 Ga0501079_0033254 3300049741 Bacteria 3967
176 Ga0501079_0056504 3300049741 Bacteria 3028
177 Ga0501080_0012453 3300049742 Bacteria 7797
178 Ga0501083_0005809 3300049744 Bacteria 8741
179 Ga0501083_0051064 3300049744 Bacteria 2782
180 Ga0501035_0001408 3300049822 Bacteria 24677
181 Ga0501035_0062066 3300049822 Bacteria 3325
182 Ga0501044_0017524 3300049823 Bacteria 7686
183 Ga0501044_0056582 3300049823 Bacteria 4027
184 Ga0501044_0099457 3300049823 Bacteria 2927
185 Ga0501045_0057369 3300049824 Bacteria 2849
186 nmdc:mga03683_52906_c1 3300050489 Unclassified 1698
187 nmdc:mga00v17_7880_c1 3300050491 Bacteria 5713
188 nmdc:mga0yw44_412_c3 3300050492 Bacteria 7857
189 nmdc:mga05p37_19606_c1 3300050507 Bacteria 8179
190 nmdc:mga05p37_241158_c1 3300050507 Bacteria 2174
191 nmdc:mga05p37_56579_c2 3300050507 Unclassified 2337
192 nmdc:mga09592_194527_c1 3300050508 Bacteria 1755
193 nmdc:mga09592_280705_c1 3300050508 Unclassified 1445
194 nmdc:mga0qj67_49404_c1 3300050509 Bacteria 3325
195 nmdc:mga06r32_162610_c1 3300050510 Bacteria 2215
196 nmdc:mga06r32_30782_c1 3300050510 Bacteria 5036
197 nmdc:mga06r32_72194_c1 3300050510 Bacteria 3342
198 nmdc:mga08y16_168046_c1 3300050511 Unclassified 2279
199 nmdc:mga08y16_38314_c1 3300050511 Bacteria 5035
200 nmdc:mga0n895_117532_c1 3300050512 Bacteria 2679
201 nmdc:mga0n895_2742_c1 3300050512 Bacteria 13908
202 nmdc:mga0n895_44128_c1 3300050512 Bacteria 4348
203 nmdc:mga0n895_5346_c1 3300050512 Bacteria 10707
204 nmdc:mga0rr50_17582_c1 3300050513 Bacteria 4778
205 nmdc:mga0rr50_33808_c1 3300050513 Unclassified 3656
206 nmdc:mga08x19_8857_c1 3300050514 Bacteria 6002
207 nmdc:mga0a205_14637_c1 3300050515 Bacteria 7321
208 nmdc:mga0a205_146760_c1 3300050515 Bacteria 2259
209 nmdc:mga0a205_164722_c1 3300050515 Unclassified 2113
210 nmdc:mga0a205_1984_c1 3300050515 Bacteria 17833
211 nmdc:mga0a205_289617_c1 3300050515 Unclassified 1512
212 nmdc:mga0a205_59131_c1 3300050515 Unclassified 3703
213 Ga0495595_0025575 3300053084 Bacteria 2617
214 Ga0495619_0005155 3300053085 Bacteria 8294
215 Ga0501084_0188023 3300054114 Unclassified 1743
216 Ga0501084_0193932 3300054114 Unclassified 1714
217 Ga0501082_0083457 3300060353 Unclassified 2756
218 Ga0530510_0007420 3300061734 Bacteria 7633
219 Ga0530510_0072481 3300061734 Unclassified 2500
220 Ga0530510_0134737 3300061734 Unclassified 1818

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300036401 Ga0373937_0181339 Ga0373937_0181339_719_1960 374
2 3300045051 Ga0451576_0462337 Ga0451576_0462337_29_1183 384
3 3300048916 Ga0496113_0232794 Ga0496113_0232794_50_1204 384
4 3300054114 Ga0501084_0188023 Ga0501084_0188023_550_1731 393
5 3300025918 Ga0207662_10190181 Ga0207662_101901811 401
6 3300049573 Ga0501037_0007166 Ga0501037_0007166_6899_8137 412
7 3300049577 Ga0501041_0023722 Ga0501041_0023722_2425_3663 412
8 3300049579 Ga0501043_0117406 Ga0501043_0117406_834_2072 412
9 3300049587 Ga0501071_0037990 Ga0501071_0037990_2186_3424 412
10 3300049591 Ga0501075_0041706 Ga0501075_0041706_16_1254 412
11 3300049592 Ga0501076_0079646 Ga0501076_0079646_16_1254 412
12 3300060353 Ga0501082_0083457 Ga0501082_0083457_16_1254 412
13 3300046675 Ga0495657_0077065 Ga0495657_0077065_559_1917 413
14 3300053084 Ga0495595_0025575 Ga0495595_0025575_43_1398 413
15 3300053085 Ga0495619_0005155 Ga0495619_0005155_4800_6188 423
16 3300005293 Ga0065715_10121678 Ga0065715_101216782 426
17 3300009147 Ga0114129_10184192 Ga0114129_101841922 430
18 3300027695 Ga0209966_1007159 Ga0209966_10071592 430
19 3300050510 nmdc:mga06r32_162610_c1 nmdc:mga06r32_162610_c1_273_1670 430
20 3300050508 nmdc:mga09592_280705_c1 nmdc:mga09592_280705_c1_107_1417 431
21 3300005471 Ga0070698_100046226 Ga0070698_1000462262 432
22 3300050507 nmdc:mga05p37_56579_c2 nmdc:mga05p37_56579_c2_357_1673 433
23 3300050515 nmdc:mga0a205_146760_c1 nmdc:mga0a205_146760_c1_361_1677 438
24 3300049590 Ga0501074_0181611 Ga0501074_0181611_27_1349 440
25 3300054114 Ga0501084_0193932 Ga0501084_0193932_27_1349 440
26 3300005468 Ga0070707_100061325 Ga0070707_1000613252 442
27 3300050507 nmdc:mga05p37_241158_c1 nmdc:mga05p37_241158_c1_201_1553 443
28 3300050509 nmdc:mga0qj67_49404_c1 nmdc:mga0qj67_49404_c1_1138_2472 443
29 3300050510 nmdc:mga06r32_72194_c1 nmdc:mga06r32_72194_c1_1790_3142 443
30 3300050512 nmdc:mga0n895_117532_c1 nmdc:mga0n895_117532_c1_55_1407 443
31 3300050513 nmdc:mga0rr50_17582_c1 nmdc:mga0rr50_17582_c1_2151_3503 443
32 3300050514 nmdc:mga08x19_8857_c1 nmdc:mga08x19_8857_c1_3522_4874 443
33 3300050515 nmdc:mga0a205_59131_c1 nmdc:mga0a205_59131_c1_1230_2582 443
34 3300025936 Ga0207670_10090851 Ga0207670_100908512 445
35 3300025960 Ga0207651_10207503 Ga0207651_102075031 445
36 3300049741 Ga0501079_0033254 Ga0501079_0033254_182_1540 445
37 3300005340 Ga0070689_100150002 Ga0070689_1001500022 446
38 3300039447 Ga0436361_0171090 Ga0436361_0171090_1592_2995 446
39 3300049580 Ga0501046_0054395 Ga0501046_0054395_49_1392 447
40 3300049824 Ga0501045_0057369 Ga0501045_0057369_306_1676 447
41 3300005981 Ga0081538_10046541 Ga0081538_100465412 448
42 3300006038 Ga0075365_10010032 Ga0075365_100100325 448
43 3300006051 Ga0075364_10025410 Ga0075364_100254102 448
44 3300035090 Ga0373949_0002129 Ga0373949_0002129_470_1858 448
45 3300050489 nmdc:mga03683_52906_c1 nmdc:mga03683_52906_c1_16_1380 448
46 3300050491 nmdc:mga00v17_7880_c1 nmdc:mga00v17_7880_c1_1365_2729 448
47 3300050492 nmdc:mga0yw44_412_c3 nmdc:mga0yw44_412_c3_5040_6404 448
48 3300050512 nmdc:mga0n895_5346_c1 nmdc:mga0n895_5346_c1_7435_8823 448
49 3300050515 nmdc:mga0a205_1984_c1 nmdc:mga0a205_1984_c1_12287_13675 448
50 iso_pu_bacteria 3003665799 3003669242 448
51 3300005341 Ga0070691_10004701 Ga0070691_100047014 449
52 3300005347 Ga0070668_100035973 Ga0070668_1000359732 449
53 3300005353 Ga0070669_100003041 Ga0070669_1000030413 449
54 3300005441 Ga0070700_100001277 Ga0070700_1000012779 449
55 3300005459 Ga0068867_100001824 Ga0068867_10000182414 449
56 3300005543 Ga0070672_100063495 Ga0070672_1000634951 449
57 3300005545 Ga0070695_100001854 Ga0070695_1000018548 449
58 3300005719 Ga0068861_100002205 Ga0068861_10000220511 449
59 3300005844 Ga0068862_100037425 Ga0068862_1000374253 449
60 3300005844 Ga0068862_100140294 Ga0068862_1001402942 449
61 3300005983 Ga0081540_1001108 Ga0081540_10011082 449
62 3300006881 Ga0068865_100004873 Ga0068865_1000048736 449
63 3300009094 Ga0111539_10011944 Ga0111539_100119442 449
64 3300009148 Ga0105243_10002272 Ga0105243_100022728 449
65 3300009553 Ga0105249_10005452 Ga0105249_100054523 449
66 3300013297 Ga0157378_10048125 Ga0157378_100481252 449
67 3300014326 Ga0157380_10001685 Ga0157380_1000168513 449
68 3300017792 Ga0163161_10065631 Ga0163161_100656312 449
69 3300025935 Ga0207709_10001268 Ga0207709_1000126813 449
70 3300025938 Ga0207704_10001881 Ga0207704_100018815 449
71 3300025940 Ga0207691_10043388 Ga0207691_100433882 449
72 3300025961 Ga0207712_10007525 Ga0207712_100075255 449
73 3300026075 Ga0207708_10007639 Ga0207708_100076395 449
74 3300026089 Ga0207648_10002885 Ga0207648_1000288514 449
75 3300026118 Ga0207675_100002689 Ga0207675_10000268914 449
76 3300027907 Ga0207428_10020973 Ga0207428_100209732 449
77 3300028380 Ga0268265_10001523 Ga0268265_100015238 449
78 iso_pu_bacteria 643348564 643592484 449
79 3300005333 Ga0070677_10000469 Ga0070677_100004699 450
80 3300005336 Ga0070680_100035617 Ga0070680_1000356174 450
81 3300005353 Ga0070669_100133439 Ga0070669_1001334392 450
82 3300005354 Ga0070675_100050781 Ga0070675_1000507812 450
83 3300005356 Ga0070674_100003170 Ga0070674_1000031707 450
84 3300005444 Ga0070694_100062363 Ga0070694_1000623633 450
85 3300005456 Ga0070678_100013792 Ga0070678_1000137924 450
86 3300005459 Ga0068867_100015005 Ga0068867_1000150052 450
87 3300005937 Ga0081455_10000052 Ga0081455_1000005276 450
88 3300006051 Ga0075364_10050412 Ga0075364_100504122 450
89 3300006852 Ga0075433_10000461 Ga0075433_1000046119 450
90 3300006871 Ga0075434_100019674 Ga0075434_1000196744 450
91 3300009094 Ga0111539_10091656 Ga0111539_100916563 450
92 3300013308 Ga0157375_10093149 Ga0157375_100931492 450
93 3300017792 Ga0163161_10024640 Ga0163161_100246403 450
94 3300025893 Ga0207682_10000141 Ga0207682_100001415 450
95 3300025940 Ga0207691_10002570 Ga0207691_1000257013 450
96 3300025960 Ga0207651_10083952 Ga0207651_100839522 450
97 3300025986 Ga0207658_10209419 Ga0207658_102094191 450
98 3300026089 Ga0207648_10001605 Ga0207648_100016052 450
99 3300026121 Ga0207683_10006748 Ga0207683_100067487 450
100 3300031548 Ga0307408_100026754 Ga0307408_1000267542 450
101 3300031852 Ga0307410_10013538 Ga0307410_100135382 450
102 3300031911 Ga0307412_10093119 Ga0307412_100931191 450
103 3300032004 Ga0307414_10002471 Ga0307414_100024712 450
104 3300032126 Ga0307415_100034209 Ga0307415_1000342092 450
105 3300035083 Ga0373926_0001571 Ga0373926_0001571_490_1863 450
106 3300035088 Ga0373940_0010440 Ga0373940_0010440_354_1742 450
107 3300035089 Ga0373944_0005377 Ga0373944_0005377_1787_3160 450
108 3300035112 Ga0373932_0008088 Ga0373932_0008088_1049_2437 450
109 3300035113 Ga0373936_0000086 Ga0373936_0000086_4974_6347 450
110 3300035116 Ga0373945_0001616 Ga0373945_0001616_4663_6036 450
111 3300035171 Ga0373946_0001101 Ga0373946_0001101_1183_2556 450
112 3300035725 Ga0373947_0000763 Ga0373947_0000763_275_1648 450
113 3300037068 Ga0373925_0004544 Ga0373925_0004544_1225_2598 450
114 3300045051 Ga0451576_0002244 Ga0451576_0002244_22281_23684 450
115 3300046472 Ga0495580_0003335 Ga0495580_0003335_11917_13290 450
116 3300046475 Ga0495639_0025931 Ga0495639_0025931_1015_2388 450
117 3300046516 Ga0495628_0015852 Ga0495628_0015852_4630_6030 450
118 3300046517 Ga0495630_0053208 Ga0495630_0053208_1133_2506 450
119 3300046533 Ga0495640_0073159 Ga0495640_0073159_339_1739 450
120 3300046535 Ga0495586_0026708 Ga0495586_0026708_1578_2951 450
121 3300046674 Ga0495588_0029211 Ga0495588_0029211_1202_2575 450
122 3300046683 Ga0495658_0026454 Ga0495658_0026454_1173_2546 450
123 3300046690 Ga0495624_0071418 Ga0495624_0071418_193_1566 450
124 3300049586 Ga0501070_0174710 Ga0501070_0174710_264_1640 450
125 3300049822 Ga0501035_0062066 Ga0501035_0062066_1716_3092 450
126 3300049823 Ga0501044_0099457 Ga0501044_0099457_542_1918 450
127 3300005618 Ga0068864_100019365 Ga0068864_1000193654 451
128 3300005985 Ga0081539_10000311 Ga0081539_1000031192 451
129 3300014325 Ga0163163_10011270 Ga0163163_100112703 451
130 3300026095 Ga0207676_10014841 Ga0207676_100148411 451
131 3300006852 Ga0075433_10077338 Ga0075433_100773381 452
132 3300049575 Ga0501039_0101130 Ga0501039_0101130_594_1979 452
133 3300049576 Ga0501040_0012638 Ga0501040_0012638_3220_4605 452
134 3300049577 Ga0501041_0035405 Ga0501041_0035405_193_1578 452
135 3300049586 Ga0501070_0033544 Ga0501070_0033544_1027_2421 452
136 3300049588 Ga0501072_0067055 Ga0501072_0067055_461_1846 452
137 3300049592 Ga0501076_0018527 Ga0501076_0018527_3471_4856 452
138 3300049744 Ga0501083_0051064 Ga0501083_0051064_110_1495 452
139 3300049822 Ga0501035_0001408 Ga0501035_0001408_4263_5657 452
140 3300049823 Ga0501044_0056582 Ga0501044_0056582_2394_3788 452
141 3300050515 nmdc:mga0a205_164722_c1 nmdc:mga0a205_164722_c1_673_2046 452
142 3300061734 Ga0530510_0007420 Ga0530510_0007420_4995_6380 452
143 3300047447 Ga0495685_018225 Ga0495685_018225_1000_2382 453
144 3300050508 nmdc:mga09592_194527_c1 nmdc:mga09592_194527_c1_302_1693 454
145 3300005290 Ga0065712_10071367 Ga0065712_100713672 456
146 3300005293 Ga0065715_10001410 Ga0065715_100014104 456
147 3300005331 Ga0070670_100048979 Ga0070670_1000489792 456
148 3300005334 Ga0068869_100238960 Ga0068869_1002389601 456
149 3300005336 Ga0070680_100048948 Ga0070680_1000489483 456
150 3300005347 Ga0070668_100019994 Ga0070668_1000199942 456
151 3300005353 Ga0070669_100041732 Ga0070669_1000417322 456
152 3300005354 Ga0070675_100017770 Ga0070675_1000177704 456
153 3300005355 Ga0070671_100017219 Ga0070671_1000172192 456
154 3300005364 Ga0070673_100026845 Ga0070673_1000268452 456
155 3300005367 Ga0070667_100029288 Ga0070667_1000292882 456
156 3300005458 Ga0070681_10252314 Ga0070681_102523141 456
157 3300005459 Ga0068867_100159167 Ga0068867_1001591671 456
158 3300005530 Ga0070679_100055114 Ga0070679_1000551142 456
159 3300005530 Ga0070679_100190935 Ga0070679_1001909352 456
160 3300005546 Ga0070696_100026897 Ga0070696_1000268972 456
161 3300006358 Ga0068871_100208734 Ga0068871_1002087342 456
162 3300006852 Ga0075433_10082076 Ga0075433_100820763 456
163 3300006871 Ga0075434_100005178 Ga0075434_1000051783 456
164 3300006871 Ga0075434_100049150 Ga0075434_1000491502 456
165 3300009094 Ga0111539_10142534 Ga0111539_101425342 456
166 3300009094 Ga0111539_10214719 Ga0111539_102147192 456
167 3300011119 Ga0105246_10016918 Ga0105246_100169182 456
168 3300013100 Ga0157373_10044852 Ga0157373_100448522 456
169 3300013306 Ga0163162_10035259 Ga0163162_100352595 456
170 3300025912 Ga0207707_10014120 Ga0207707_100141202 456
171 3300025919 Ga0207657_10102768 Ga0207657_101027682 456
172 3300025921 Ga0207652_10013423 Ga0207652_100134233 456
173 3300025921 Ga0207652_10159133 Ga0207652_101591331 456
174 3300025933 Ga0207706_10007890 Ga0207706_1000789011 456
175 3300026023 Ga0207677_10028421 Ga0207677_100284211 456
176 3300026078 Ga0207702_10100149 Ga0207702_101001492 456
177 3300026121 Ga0207683_10001178 Ga0207683_1000117817 456
178 3300027907 Ga0207428_10145211 Ga0207428_101452112 456
179 3300048907 Ga0496104_0287772 Ga0496104_0287772_24_1394 456
180 3300049569 Ga0501032_0015128 Ga0501032_0015128_4042_5412 456
181 3300049581 Ga0501047_0213267 Ga0501047_0213267_377_1747 456
182 3300049586 Ga0501070_0005805 Ga0501070_0005805_2754_4124 456
183 3300049589 Ga0501073_0041993 Ga0501073_0041993_462_1832 456
184 3300049590 Ga0501074_0028414 Ga0501074_0028414_259_1629 456
185 3300049592 Ga0501076_0164702 Ga0501076_0164702_313_1713 456
186 3300049593 Ga0501077_0031335 Ga0501077_0031335_100_1470 456
187 3300049593 Ga0501077_0053308 Ga0501077_0053308_285_1655 456
188 3300049742 Ga0501080_0012453 Ga0501080_0012453_4003_5373 456
189 3300049744 Ga0501083_0005809 Ga0501083_0005809_213_1583 456
190 3300049823 Ga0501044_0017524 Ga0501044_0017524_5562_6932 456
191 3300050507 nmdc:mga05p37_19606_c1 nmdc:mga05p37_19606_c1_2351_3721 456
192 3300050511 nmdc:mga08y16_168046_c1 nmdc:mga08y16_168046_c1_260_1630 456
193 3300050512 nmdc:mga0n895_2742_c1 nmdc:mga0n895_2742_c1_1583_2953 456
194 3300050512 nmdc:mga0n895_44128_c1 nmdc:mga0n895_44128_c1_2394_3764 456
195 3300050513 nmdc:mga0rr50_33808_c1 nmdc:mga0rr50_33808_c1_658_2028 456
196 3300050515 nmdc:mga0a205_14637_c1 nmdc:mga0a205_14637_c1_5144_6514 456
197 3300050515 nmdc:mga0a205_289617_c1 nmdc:mga0a205_289617_c1_11_1381 456
198 3300061734 Ga0530510_0134737 Ga0530510_0134737_87_1487 456
199 3300003911 JGI25405J52794_10001745 JGI25405J52794_100017452 457
200 3300005546 Ga0070696_100010513 Ga0070696_1000105133 457
201 3300005617 Ga0068859_100058525 Ga0068859_1000585252 457
202 3300005937 Ga0081455_10000380 Ga0081455_1000038036 457
203 3300006844 Ga0075428_100016095 Ga0075428_1000160958 457
204 3300006846 Ga0075430_100021742 Ga0075430_1000217422 457
205 3300006846 Ga0075430_100053258 Ga0075430_1000532583 457
206 3300006847 Ga0075431_100023044 Ga0075431_1000230442 457
207 3300006847 Ga0075431_100028123 Ga0075431_1000281234 457
208 3300006880 Ga0075429_100128808 Ga0075429_1001288082 457
209 3300006931 Ga0097620_100058526 Ga0097620_1000585263 457
210 3300007076 Ga0075435_100199233 Ga0075435_1001992331 457
211 3300009094 Ga0111539_10046679 Ga0111539_100466792 457
212 3300025940 Ga0207691_10005743 Ga0207691_100057431 457
213 3300027682 Ga0209971_1004374 Ga0209971_10043741 457
214 3300035691 Ga0373931_0113892 Ga0373931_0113892_18_1391 457
215 3300035725 Ga0373947_0023066 Ga0373947_0023066_1748_3121 457
216 3300049588 Ga0501072_0179108 Ga0501072_0179108_29_1402 457
217 3300049591 Ga0501075_0008946 Ga0501075_0008946_5278_6651 457
218 3300049593 Ga0501077_0039374 Ga0501077_0039374_152_1525 457
219 3300049741 Ga0501079_0056504 Ga0501079_0056504_1490_2863 457
220 3300050510 nmdc:mga06r32_30782_c1 nmdc:mga06r32_30782_c1_2809_4203 457
221 3300050511 nmdc:mga08y16_38314_c1 nmdc:mga08y16_38314_c1_1966_3339 457
222 3300061734 Ga0530510_0072481 Ga0530510_0072481_67_1440 457

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03972

MmgE_PrpD_N

MmgE/PrpD N-terminal domain

16

259

0.95

PF19305

MmgE_PrpD_C

MmgE/PrpD C-terminal domain

282

452

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hp0-assembly1.cif.gz_A crystal structure of iminodisuccinate epimerase 0.9242 5 451
6r6t-assembly1.cif.gz_B crystal structure of mouse cis-aconitate decarboxylase 0.9192 3 454
7br9-assembly1.cif.gz_A crystal structure of mus musculus irg1 0.915 5 454
2hp0-assembly1.cif.gz_A crystal structure of iminodisuccinate epimerase 0.9142 5 451
6r6t-assembly1.cif.gz_B crystal structure of mouse cis-aconitate decarboxylase 0.9094 3 454
ID Description Score Start End Superfamily
2hp3B01 Mainly Alpha;Orthogonal Bundle;2-methylcitrate dehydratase PrpD;2-methylcitrate dehydratase PrpD 0.8961 5 451 1.10.4100.10
2hp3B01 Mainly Alpha;Orthogonal Bundle;2-methylcitrate dehydratase PrpD;2-methylcitrate dehydratase PrpD 0.8853 5 451 1.10.4100.10
af_O06582_36_312_1.10.4100.10 Mainly Alpha;Orthogonal Bundle;2-methylcitrate dehydratase PrpD;2-methylcitrate dehydratase PrpD 0.8846 5 271 1.10.4100.10
af_O06582_313_451_3.30.1330.120 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;2-methylcitrate dehydratase PrpD 0.8569 274 399 3.30.1330.120
af_A0A2R8RL39_271_404_1.10.4100.10 Mainly Alpha;Orthogonal Bundle;2-methylcitrate dehydratase PrpD;2-methylcitrate dehydratase PrpD 0.8476 269 403 1.10.4100.10
ID Description Score Start End GO Terms
AF-A0A846NKZ9-F1-model_v4 MmgE/PrpD family protein 0.9826 5 217 GO:0016829
AF-A0A3N5WHS4-F1-model_v4 MmgE/PrpD family protein 0.9822 3 272 GO:0016829
AF-A0A7C4B6C1-F1-model_v4 MmgE/PrpD N-terminal domain-containing protein 0.9752 1 143 GO:0016829
AF-A0A6G8PWB6-F1-model_v4 MmgE/PrpD family protein 0.9738 1 457 GO:0016829
AF-A0A523FAP6-F1-model_v4 MmgE/PrpD family protein 0.9729 1 455 GO:0016829

Feature Viewer

pLDDT pTM Quality
93.96 0.93 High
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Predicted Structure (AlphaFold2)

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