F333956

General Info

Members Datasets Scaffolds Average Seq Length
221 148 442 137

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2935409751|2935413326
Length 165
Sequence PGPGGSVDPSEVRRRDAAAGSGHDWEMISRELALTLRDAGLVWHPQSGDRFQLDLPSDVEAEAEADVFTVSEMTIEARRHPTGTVLAFNGTTEWALDSVALVDAVWLPREDQLRELLRATFRSLTRLDDAFEVEIELGGERVRFEHPDVAEAYGLALSELVGRSR

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
19 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
26 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
31 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
42 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
43 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
44 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
45 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
49 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
52 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
57 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
58 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
59 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
60 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
61 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
62 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
63 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
64 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
65 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
66 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
67 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
68 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
69 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
70 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
71 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
72 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
73 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
74 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
75 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
76 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
77 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
78 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
79 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
80 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
81 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
86 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
89 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
90 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
91 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
92 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
93 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
94 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
95 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
108 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
109 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
112 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
113 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
114 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
115 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
116 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
117 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
119 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
120 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
121 2643221549 Agromyces sp. Root1464 Isolate Unclassified
122 2643221566 Microbacterium sp. Root166 Isolate Unclassified
123 2643221575 Microbacterium sp. Root61 Isolate Unclassified
124 2643221597 Microbacterium sp. Root180 Isolate Unclassified
125 2643221619 Agromyces sp. Root81 Isolate Unclassified
126 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
127 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
128 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
129 2773857759 Microbacterium sp. 1294 Isolate Unclassified
130 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
131 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
132 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
133 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
134 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
135 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
136 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
137 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
138 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
139 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
140 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
141 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
142 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
143 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
144 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
145 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
146 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
147 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
148 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.97
Metatranscriptomes 0.9
Isolates 13.12

Biome Distribution

Category Percentage (%)
Aerial Root 0.45
Bulb 0
Endosphere 4.52
Nodule 0
Rhizoplane 13.12
Rhizosphere 56.11
Stem 0
Stem Tuber 0
Unclassified 0.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10342640 3300003323 Bacteria 1517
2 Ga0006562J51391_1017583 3300003578 Bacteria 6135
3 Ga0006562J51391_1017584 3300003578 Bacteria 5050
4 Ga0070683_101998817 3300005329 Bacteria 557
5 Ga0070668_100264978 3300005347 Bacteria 1430
6 Ga0070668_100276315 3300005347 Bacteria 1402
7 Ga0070671_101705554 3300005355 Bacteria 559
8 Ga0070659_100226220 3300005366 Bacteria 1545
9 Ga0070663_101021218 3300005455 Bacteria 720
10 Ga0068853_100024678 3300005539 Bacteria 5043
11 Ga0070672_100738365 3300005543 Bacteria 863
12 Ga0070665_101324242 3300005548 Bacteria 730
13 Ga0068855_101039096 3300005563 Bacteria 859
14 Ga0068861_100305123 3300005719 Bacteria 1380
15 Ga0068870_10399528 3300005840 Bacteria 894
16 Ga0075363_100039717 3300006048 Bacteria 2478
17 Ga0075364_10010838 3300006051 Bacteria 5520
18 Ga0075364_10117692 3300006051 Bacteria 1777
19 Ga0070715_10310173 3300006163 Bacteria 847
20 Ga0075367_10070853 3300006178 Bacteria 2096
21 Ga0075369_10115974 3300006186 Bacteria 1210
22 Ga0105244_10052515 3300009036 Bacteria 2075
23 Ga0105244_10053526 3300009036 Bacteria 2051
24 Ga0105244_10194123 3300009036 Bacteria 959
25 Ga0111539_11330119 3300009094 Bacteria 834
26 Ga0105243_10030739 3300009148 Bacteria 4137
27 Ga0105243_10035028 3300009148 Bacteria 3891
28 Ga0105243_10113736 3300009148 Bacteria 2270
29 Ga0105243_10425422 3300009148 Bacteria 1240
30 Ga0105238_10526133 3300009551 Bacteria 1185
31 Ga0105238_12375885 3300009551 Bacteria 565
32 Ga0157370_11406985 3300013104 Bacteria 628
33 Ga0157369_11160999 3300013105 Bacteria 789
34 Ga0163162_10300789 3300013306 Bacteria 1736
35 Ga0157372_10036098 3300013307 Bacteria 5447
36 Ga0157375_10684309 3300013308 Bacteria 1180
37 Ga0157375_11339760 3300013308 Bacteria 842
38 Ga0163163_11110035 3300014325 Bacteria 854
39 Ga0163163_11129020 3300014325 Bacteria 847
40 Ga0163163_11407797 3300014325 Bacteria 759
41 Ga0157380_10226730 3300014326 Bacteria 1675
42 Ga0157380_10888141 3300014326 Bacteria 916
43 Ga0163161_11132993 3300017792 Bacteria 674
44 Ga0207655_1014927 3300025728 Bacteria 4351
45 Ga0207655_1020536 3300025728 Bacteria 3389
46 Ga0207688_10210166 3300025901 Bacteria 1169
47 Ga0207647_10158573 3300025904 Bacteria 1320
48 Ga0207709_10014748 3300025935 Bacteria 4320
49 Ga0207709_10208761 3300025935 Bacteria 1400
50 Ga0207709_10243448 3300025935 Bacteria 1310
51 Ga0207709_10894591 3300025935 Bacteria 721
52 Ga0207669_10348771 3300025937 Bacteria 1143
53 Ga0207691_10385472 3300025940 Bacteria 1196
54 Ga0207691_10396520 3300025940 Bacteria 1177
55 Ga0207679_10628752 3300025945 Bacteria 970
56 Ga0207640_11837027 3300025981 Bacteria 548
57 Ga0207639_10491917 3300026041 Bacteria 1119
58 Ga0268266_10160138 3300028379 Bacteria 2036
59 Ga0307408_100415419 3300031548 Bacteria 1159
60 Ga0307413_10188659 3300031824 Bacteria 1478
61 Ga0307413_10320176 3300031824 Bacteria 1184
62 Ga0307413_10371676 3300031824 Bacteria 1111
63 Ga0307406_10000886 3300031901 Bacteria 16853
64 Ga0307406_10080868 3300031901 Bacteria 2159
65 Ga0307406_10176530 3300031901 Bacteria 1551
66 Ga0307406_10475977 3300031901 Bacteria 1007
67 Ga0307406_11522467 3300031901 Bacteria 589
68 Ga0307407_10079870 3300031903 Bacteria 1975
69 Ga0307407_10700052 3300031903 Bacteria 763
70 Ga0307412_10222148 3300031911 Bacteria 1449
71 Ga0307412_10297126 3300031911 Bacteria 1275
72 Ga0307412_11398299 3300031911 Bacteria 633
73 Ga0307409_100097930 3300031995 Bacteria 2424
74 Ga0307409_100886525 3300031995 Bacteria 905
75 Ga0307416_100076350 3300032002 Bacteria 2808
76 Ga0307416_100252410 3300032002 Bacteria 1718
77 Ga0307416_100787746 3300032002 Bacteria 1046
78 Ga0307414_10396685 3300032004 Bacteria 1197
79 Ga0307414_10563300 3300032004 Bacteria 1017
80 Ga0307411_10700762 3300032005 Bacteria 882
81 Ga0307415_100324204 3300032126 Bacteria 1286
82 Ga0307415_101733837 3300032126 Bacteria 603
83 Ga0395899_0060908 3300037312 Bacteria 2780
84 Ga0395900_0009241 3300037418 Bacteria 10106
85 Ga0395898_0040154 3300037466 Bacteria 4629
86 Ga0395905_0014426 3300037471 Bacteria 7544
87 Ga0395901_0003020 3300038443 Bacteria 16970
88 Ga0439465_0118895 3300041413 Bacteria 925
89 Ga0451787_209139 3300041441 Bacteria 520
90 Ga0451797_1316449 3300041453 Bacteria 757
91 Ga0451800_0426021 3300041459 Bacteria 526
92 Ga0451837_0744810 3300041494 Bacteria 794
93 Ga0451841_0285852 3300041498 Bacteria 627
94 Ga0451845_0324824 3300041501 Bacteria 957
95 Ga0451847_0628020 3300041503 Bacteria 583
96 Ga0451853_0523299 3300041512 Bacteria 813
97 Ga0451853_2500072 3300041512 Bacteria 553
98 Ga0451853_3029229 3300041512 Bacteria 586
99 Ga0450907_090471 3300042146 Bacteria 532
100 Ga0450908_056774 3300042184 Bacteria 684
101 Ga0450918_097063 3300042531 Bacteria 574
102 Ga0466965_0039579 3300044683 Bacteria 2318
103 Ga0466965_0418426 3300044683 Bacteria 742
104 Ga0466968_0024182 3300044735 Bacteria 2480
105 Ga0466960_0184053 3300044901 Bacteria 1134
106 Ga0495653_0425984 3300046463 Bacteria 839
107 Ga0495650_0153777 3300046471 Bacteria 824
108 Ga0495613_0698928 3300046689 Bacteria 668
109 Ga0495671_0224607 3300046692 Bacteria 909
110 Ga0495615_0013622 3300048090 Bacteria 1703
111 Ga0496101_0083283 3300048904 Bacteria 2367
112 Ga0496101_1347751 3300048904 Bacteria 557
113 Ga0496102_0122235 3300048905 Bacteria 2432
114 Ga0496103_0031795 3300048906 Bacteria 3219
115 Ga0496104_0089609 3300048907 Bacteria 2938
116 Ga0496104_0139427 3300048907 Bacteria 2330
117 Ga0496104_0305901 3300048907 Bacteria 1502
118 Ga0496105_0059716 3300048908 Bacteria 3146
119 Ga0496105_0117503 3300048908 Bacteria 2193
120 Ga0496107_0016064 3300048910 Bacteria 5254
121 Ga0496108_0031999 3300048911 Bacteria 4366
122 Ga0496108_0116763 3300048911 Bacteria 2286
123 Ga0496108_0159769 3300048911 Bacteria 1947
124 Ga0496109_0038217 3300048912 Bacteria 4339
125 Ga0496109_0052181 3300048912 Bacteria 3727
126 Ga0496109_0928836 3300048912 Unclassified 808
127 Ga0496110_0056882 3300048913 Bacteria 3442
128 Ga0496110_0512523 3300048913 Bacteria 1092
129 Ga0496111_0025934 3300048914 Bacteria 4136
130 Ga0496111_0060832 3300048914 Bacteria 2738
131 Ga0496113_0071905 3300048916 Bacteria 2631
132 Ga0496113_0098400 3300048916 Bacteria 2264
133 Ga0496114_0036348 3300048917 Bacteria 4071
134 Ga0496114_0079788 3300048917 Bacteria 2763
135 Ga0496115_0093518 3300048918 Bacteria 2458
136 Ga0496115_1044122 3300048918 Bacteria 622
137 Ga0496117_0000817 3300048920 Bacteria 48233
138 Ga0496117_0013211 3300048920 Bacteria 7219
139 Ga0496118_0236899 3300048921 Bacteria 1048
140 Ga0496118_0302677 3300048921 Bacteria 877
141 Ga0496119_0002757 3300048922 Bacteria 18904
142 Ga0496119_0003715 3300048922 Bacteria 15634
143 Ga0496119_0003720 3300048922 Bacteria 15622
144 Ga0496119_0004457 3300048922 Bacteria 13936
145 Ga0496119_0094188 3300048922 Bacteria 1695
146 Ga0496120_0003401 3300048923 Bacteria 14549
147 Ga0496120_0003809 3300048923 Bacteria 13282
148 Ga0496120_0015111 3300048923 Bacteria 5107
149 Ga0496122_0000986 3300048925 Bacteria 50817
150 Ga0496122_0070980 3300048925 Bacteria 2484
151 Ga0496122_0122266 3300048925 Bacteria 1675
152 Ga0496122_0349898 3300048925 Bacteria 772
153 Ga0496123_0000241 3300048926 Bacteria 110078
154 Ga0496123_0006123 3300048926 Bacteria 11796
155 Ga0496123_0119710 3300048926 Bacteria 1484
156 Ga0496124_0004989 3300048927 Bacteria 15180
157 Ga0496124_0042926 3300048927 Bacteria 3890
158 Ga0496124_0063949 3300048927 Bacteria 3072
159 Ga0496124_0584367 3300048927 Bacteria 730
160 Ga0496125_0001915 3300048928 Bacteria 28496
161 Ga0496125_0006917 3300048928 Bacteria 12141
162 Ga0496125_0016767 3300048928 Bacteria 7023
163 Ga0496126_0005523 3300048929 Bacteria 14400
164 Ga0496126_0222287 3300048929 Bacteria 1586
165 Ga0496126_0235595 3300048929 Bacteria 1531
166 Ga0501031_0171353 3300049568 Bacteria 1418
167 Ga0501032_0010838 3300049569 Bacteria 6560
168 Ga0501034_0049401 3300049571 Bacteria 4244
169 Ga0501037_0369426 3300049573 Bacteria 987
170 Ga0501037_0603137 3300049573 Bacteria 737
171 Ga0501038_0013254 3300049574 Bacteria 7518
172 Ga0501038_0023747 3300049574 Bacteria 5479
173 Ga0501038_0358992 3300049574 Bacteria 1133
174 Ga0501038_0455236 3300049574 Bacteria 983
175 Ga0501043_0046870 3300049579 Bacteria 3399
176 Ga0501046_0115637 3300049580 Bacteria 2045
177 Ga0501047_0003410 3300049581 Bacteria 15048
178 Ga0501048_0141180 3300049582 Bacteria 1703
179 Ga0501070_0004870 3300049586 Bacteria 11469
180 Ga0501083_0187907 3300049744 Bacteria 1348
181 Ga0501279_056711 3300049775 Bacteria 633
182 Ga0501035_0024155 3300049822 Bacteria 5576
183 Ga0501044_0130866 3300049823 Bacteria 2503
184 nmdc:mga00v17_128976_c1 3300050491 Bacteria 1615
185 nmdc:mga00v17_559316_c1 3300050491 Bacteria 739
186 nmdc:mga0yw44_6591_c1 3300050492 Bacteria 5624
187 nmdc:mga06z11_30374_c1 3300050494 Bacteria 2614
188 nmdc:mga07m45_306662_c1 3300050496 Bacteria 923
189 nmdc:mga08y16_1888627_c1 3300050511 Bacteria 548
190 Ga0501084_0322044 3300054114 Bacteria 1306
191 Ga0501082_0004516 3300060353 Bacteria 12151
192 Ga0530510_0509198 3300061734 Bacteria 913
193 2935413326 2935409751 Bacteria 4179611
194 2643769093 2643221549 Bacteria 4042819
195 2643849126 2643221566 Bacteria 3460379
196 2643886143 2643221575 Bacteria 4022601
197 2643995318 2643221597 Bacteria 3347721
198 2644112567 2643221619 Bacteria 4158469
199 2644183957 2643221632 Bacteria 3406696
200 2723643671 2721755702 Bacteria 4373124
201 2758226680 2757320536 Bacteria 3629334
202 2774383940 2773857759 Bacteria 2963774
203 2774398843 2773857763 Bacteria 4180068
204 2808630642 2808606306 Bacteria 3608896
205 2808886164 2808606368 Bacteria 3174172
206 2809227917 2808606447 Bacteria 3572005
207 2812323886 2811994872 Bacteria 4121241
208 2821270587 2821268502 Bacteria 3750023
209 2833711557 2833709550 Bacteria 4008291
210 2852635707 2852632344 Bacteria 3463163
211 2852648006 2852646457 Bacteria 3408613
212 2857722882 2857720070 Bacteria 3189373
213 2870630901 2870628048 Bacteria 3696012
214 2919445023 2919443155 Bacteria 4072969
215 2928091594 2928090899 Bacteria 3158267
216 2977254532 2977251589 Bacteria 2952848
217 2977267306 2977264416 Bacteria 3750737
218 2984581658 2984580707 Bacteria 3351387
219 8016257002 8016254467 Bacteria 3797036
220 8045830636 8045830549 Bacteria 4444727
221 8046354246 8046352972 Bacteria 3613806
222 rootH1_10342640
223 Ga0006562J51391_1017583
224 Ga0006562J51391_1017584
225 Ga0070683_101998817
226 Ga0070668_100264978
227 Ga0070668_100276315
228 Ga0070671_101705554
229 Ga0070659_100226220
230 Ga0070663_101021218
231 Ga0068853_100024678
232 Ga0070672_100738365
233 Ga0070665_101324242
234 Ga0068855_101039096
235 Ga0068861_100305123
236 Ga0068870_10399528
237 Ga0075363_100039717
238 Ga0075364_10010838
239 Ga0075364_10117692
240 Ga0070715_10310173
241 Ga0075367_10070853
242 Ga0075369_10115974
243 Ga0105244_10052515
244 Ga0105244_10053526
245 Ga0105244_10194123
246 Ga0111539_11330119
247 Ga0105243_10030739
248 Ga0105243_10035028
249 Ga0105243_10113736
250 Ga0105243_10425422
251 Ga0105238_10526133
252 Ga0105238_12375885
253 Ga0157370_11406985
254 Ga0157369_11160999
255 Ga0163162_10300789
256 Ga0157372_10036098
257 Ga0157375_10684309
258 Ga0157375_11339760
259 Ga0163163_11110035
260 Ga0163163_11129020
261 Ga0163163_11407797
262 Ga0157380_10226730
263 Ga0157380_10888141
264 Ga0163161_11132993
265 Ga0207655_1014927
266 Ga0207655_1020536
267 Ga0207688_10210166
268 Ga0207647_10158573
269 Ga0207709_10014748
270 Ga0207709_10208761
271 Ga0207709_10243448
272 Ga0207709_10894591
273 Ga0207669_10348771
274 Ga0207691_10385472
275 Ga0207691_10396520
276 Ga0207679_10628752
277 Ga0207640_11837027
278 Ga0207639_10491917
279 Ga0268266_10160138
280 Ga0307408_100415419
281 Ga0307413_10188659
282 Ga0307413_10320176
283 Ga0307413_10371676
284 Ga0307406_10000886
285 Ga0307406_10080868
286 Ga0307406_10176530
287 Ga0307406_10475977
288 Ga0307406_11522467
289 Ga0307407_10079870
290 Ga0307407_10700052
291 Ga0307412_10222148
292 Ga0307412_10297126
293 Ga0307412_11398299
294 Ga0307409_100097930
295 Ga0307409_100886525
296 Ga0307416_100076350
297 Ga0307416_100252410
298 Ga0307416_100787746
299 Ga0307414_10396685
300 Ga0307414_10563300
301 Ga0307411_10700762
302 Ga0307415_100324204
303 Ga0307415_101733837
304 Ga0395899_0060908
305 Ga0395900_0009241
306 Ga0395898_0040154
307 Ga0395905_0014426
308 Ga0395901_0003020
309 Ga0439465_0118895
310 Ga0451787_209139
311 Ga0451797_1316449
312 Ga0451800_0426021
313 Ga0451837_0744810
314 Ga0451841_0285852
315 Ga0451845_0324824
316 Ga0451847_0628020
317 Ga0451853_0523299
318 Ga0451853_2500072
319 Ga0451853_3029229
320 Ga0450907_090471
321 Ga0450908_056774
322 Ga0450918_097063
323 Ga0466965_0039579
324 Ga0466965_0418426
325 Ga0466968_0024182
326 Ga0466960_0184053
327 Ga0495653_0425984
328 Ga0495650_0153777
329 Ga0495613_0698928
330 Ga0495671_0224607
331 Ga0495615_0013622
332 Ga0496101_0083283
333 Ga0496101_1347751
334 Ga0496102_0122235
335 Ga0496103_0031795
336 Ga0496104_0089609
337 Ga0496104_0139427
338 Ga0496104_0305901
339 Ga0496105_0059716
340 Ga0496105_0117503
341 Ga0496107_0016064
342 Ga0496108_0031999
343 Ga0496108_0116763
344 Ga0496108_0159769
345 Ga0496109_0038217
346 Ga0496109_0052181
347 Ga0496109_0928836
348 Ga0496110_0056882
349 Ga0496110_0512523
350 Ga0496111_0025934
351 Ga0496111_0060832
352 Ga0496113_0071905
353 Ga0496113_0098400
354 Ga0496114_0036348
355 Ga0496114_0079788
356 Ga0496115_0093518
357 Ga0496115_1044122
358 Ga0496117_0000817
359 Ga0496117_0013211
360 Ga0496118_0236899
361 Ga0496118_0302677
362 Ga0496119_0002757
363 Ga0496119_0003715
364 Ga0496119_0003720
365 Ga0496119_0004457
366 Ga0496119_0094188
367 Ga0496120_0003401
368 Ga0496120_0003809
369 Ga0496120_0015111
370 Ga0496122_0000986
371 Ga0496122_0070980
372 Ga0496122_0122266
373 Ga0496122_0349898
374 Ga0496123_0000241
375 Ga0496123_0006123
376 Ga0496123_0119710
377 Ga0496124_0004989
378 Ga0496124_0042926
379 Ga0496124_0063949
380 Ga0496124_0584367
381 Ga0496125_0001915
382 Ga0496125_0006917
383 Ga0496125_0016767
384 Ga0496126_0005523
385 Ga0496126_0222287
386 Ga0496126_0235595
387 Ga0501031_0171353
388 Ga0501032_0010838
389 Ga0501034_0049401
390 Ga0501037_0369426
391 Ga0501037_0603137
392 Ga0501038_0013254
393 Ga0501038_0023747
394 Ga0501038_0358992
395 Ga0501038_0455236
396 Ga0501043_0046870
397 Ga0501046_0115637
398 Ga0501047_0003410
399 Ga0501048_0141180
400 Ga0501070_0004870
401 Ga0501083_0187907
402 Ga0501279_056711
403 Ga0501035_0024155
404 Ga0501044_0130866
405 nmdc:mga00v17_128976_c1
406 nmdc:mga00v17_559316_c1
407 nmdc:mga0yw44_6591_c1
408 nmdc:mga06z11_30374_c1
409 nmdc:mga07m45_306662_c1
410 nmdc:mga08y16_1888627_c1
411 Ga0501084_0322044
412 Ga0501082_0004516
413 Ga0530510_0509198
414 2935413326
415 2643769093
416 2643849126
417 2643886143
418 2643995318
419 2644112567
420 2644183957
421 2723643671
422 2758226680
423 2774383940
424 2774398843
425 2808630642
426 2808886164
427 2809227917
428 2812323886
429 2821270587
430 2833711557
431 2852635707
432 2852648006
433 2857722882
434 2870630901
435 2919445023
436 2928091594
437 2977254532
438 2977267306
439 2984581658
440 8016257002
441 8045830636
442 8046354246

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jae-assembly1.cif.gz_B the structure of l-amino acid oxidase from rhodococcus opacus in the unbound state 0.8967 89 116
2jb2-assembly1.cif.gz_A the structure of l-amino acid oxidase from rhodococcus opacus in complex with l-phenylalanine. 0.8813 89 116
7d9f-assembly2.cif.gz_B spdh spermidine dehydrogenase semet structure 0.8791 89 116
7d9i-assembly2.cif.gz_B spdh spermidine dehydrogenase d282a mutant 0.8782 89 116
7d9j-assembly1.cif.gz_A spdh spermidine dehydrogenase y443a mutant 0.8748 89 116
ID Description Score Start End Superfamily
1ebdB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.898 90 114 3.50.50.60
2jaeB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8967 89 116 3.50.50.60
af_Q19910_105_449_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8937 90 117 3.50.50.60
2a8xB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8937 89 117 3.50.50.60
af_O53762_6_249_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8663 89 116 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A174BXY2-F1-model_v4 Uncharacterized protein 0.9326 93 134
AF-A0A535HTJ4-F1-model_v4 Site-specific integrase 0.9286 88 134 GO:0003677
GO:0006310
GO:0015074
AF-A0A558KHT5-F1-model_v4 deleted 0.9174 89 117
AF-A0A2N5K8L2-F1-model_v4 Pilus assembly protein CpaE 0.9139 1 134
AF-A0A2M8NDV8-F1-model_v4 DEAD/DEAH box helicase 0.9083 87 115 GO:0004386
GO:0005524
GO:0006281
GO:0016787
GO:0031297

Map