F332840

General Info

Members Datasets Scaffolds Average Seq Length
220 185 146 504

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2970510686|2970513912
Length 560
Sequence IMLIDLENLPSDPQLLQRLVRDMAAAVESRDGEIERLQSIIKKLQRAQFGRSSEQLAPDQLVLALEDLDADVARIQESRPFEVKPSAERSSHRRSLPDHLPREDVLLDVGGTVCTCCGGTLHAIGKNVSEMLDWVPAQLRVIRTTRPKYACRTCETVVQAPAPERLIGGGLATPALLAQVLVSKYCDHTPLYRQSQIFARNGVDLPRSTLAGWVGGACWWLEALHERLAKSVFASNHLFADDTPVPVLDPGRGRTKTGRLWVYAREQRAWAGPEPPAAIYMFAPDRKAERPASHLEHFKGVLHVDGYAGFEQLTGKGDIVLAACWAHTRRKFYDVAQATNGPIAVEALRRIGQLYAVEADVRGQSPPHRLASRRIRSKPIVDAMRVWLEAQLPLLPGRSTLAEAIRYALSRWEGLTRFLHDGRTELDTNPVERAIRPVSLGRKNHLFAGSDGGGHRWAVLCSLVETCKLNGVEPYAYLHDVLSRMVDGPPSTASTNCCRGTGKRQILSRAERRARTGRLPAPPDAPRPPMANAPAPSAARRPCRAARRDRRLRRREHRHG

Samples

Sample ID Description Type Environment
1 2510065059 Mesorhizobium ciceri WSM4083 Isolate Nodule
2 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
3 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
4 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
5 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
6 2775507074 Klebsiella sp. D5A Isolate Unclassified
7 2821118458 Enterobacter asburiae 609 Isolate Unclassified
8 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
9 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
10 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
11 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
12 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
13 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
14 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
15 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
16 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
17 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
18 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
19 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
20 2871451962 Mesorhizobium sp. M7A.F.Ca.US.006.01.1.1 Isolate Nodule
21 2874109183 Mesorhizobium sp. M7A.T.Ca.TU.009.02.1.1 Isolate Nodule
22 2878730984 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.1 Isolate Nodule
23 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
24 2903513507 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.2 Isolate Nodule
25 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
26 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
27 2906610324
28 2922368715
29 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
30 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
31 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
32 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
33 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
34 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
35 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
36 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
37 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
38 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
39 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
40 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
41 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
42 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
43 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
44 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
45 2936002035 Bradyrhizobium sp. I1.8.5 Isolate Nodule
46 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
47 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
48 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
49 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
50 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
51 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
52 2970510686 Mesorhizobium sp. M7A.F.Ca.MR.148.00.0.0 Isolate Nodule
53 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
54 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
55 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
56 3004232784 Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 Isolate Nodule
57 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
58 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
59 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
60 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
61 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
62 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
63 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
64 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
65 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
66 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
67 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
68 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
69 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
70 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
71 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
72 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
73 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
74 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
75 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
76 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
77 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
78 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
79 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
80 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
81 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
82 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
83 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
84 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
85 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
86 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
87 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
88 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
89 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
90 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
91 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
92 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
93 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
94 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
95 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
96 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
97 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
98 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
120 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
123 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
124 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
125 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
126 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
129 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
130 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
131 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
132 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
136 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
139 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
140 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
141 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
142 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
145 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
146 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
147 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
148 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
149 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
150 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
154 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
159 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
162 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
163 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
172 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
173 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
174 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
175 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
176 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
177 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
178 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
179 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
180 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
181 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
182 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
183 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
184 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
185 8054849141 Dryocola clanedunensis H11S18 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.43
Metatranscriptomes 0
Isolates 32.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.64
Nodule 25
Rhizoplane 3.18
Rhizosphere 51.36
Stem 0
Stem Tuber 0
Unclassified 11.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055536_1013566 3300003781 Bacteria 2926
2 Ga0055530_10012668 3300003791 Bacteria 2926
3 Ga0055531_10011923 3300003794 Bacteria 4137
4 Ga0058692_1009662 3300003856 Bacteria 2420
5 Ga0070658_10074697 3300005327 Bacteria 2780
6 Ga0070660_100076459 3300005339 Bacteria 2622
7 Ga0070689_100092912 3300005340 Bacteria 2380
8 Ga0070668_100035538 3300005347 Bacteria 3800
9 Ga0070713_100062945 3300005436 Bacteria 3108
10 Ga0070681_10013437 3300005458 Bacteria 8135
11 Ga0070707_100077921 3300005468 Bacteria 3198
12 Ga0070699_100152631 3300005518 Bacteria 2043
13 Ga0068853_100201368 3300005539 Bacteria 1812
14 Ga0070704_100127673 3300005549 Bacteria 1965
15 Ga0068855_100128099 3300005563 Bacteria 2901
16 Ga0068855_100291522 3300005563 Bacteria 1809
17 Ga0068861_100053429 3300005719 Bacteria 3073
18 Ga0068858_100117780 3300005842 Bacteria 2482
19 Ga0068860_100002435 3300005843 Bacteria 19548
20 Ga0068862_100074816 3300005844 Bacteria 2928
21 Ga0081455_10060561 3300005937 Bacteria 3191
22 Ga0081540_1028342 3300005983 Bacteria 3147
23 Ga0081539_10015282 3300005985 Bacteria 5589
24 Ga0070717_10083525 3300006028 Bacteria 2686
25 Ga0070716_100049988 3300006173 Bacteria 2371
26 Ga0075428_100144001 3300006844 Bacteria 2590
27 Ga0075428_100338932 3300006844 Bacteria 1615
28 Ga0075433_10091620 3300006852 Bacteria 2688
29 Ga0075434_100104673 3300006871 Bacteria 2840
30 Ga0075434_100115314 3300006871 Plasmid 2699
31 Ga0075435_100087760 3300007076 Bacteria 2563
32 Ga0099794_10012019 3300007265 Bacteria 3723
33 Ga0099794_10017911 3300007265 Bacteria 3166
34 Ga0099794_10020567 3300007265 Bacteria 2989
35 Ga0105251_10000223 3300009011 Bacteria 57260
36 Ga0105251_10036246 3300009011 Bacteria 2429
37 Ga0105244_10004706 3300009036 Bacteria 9292
38 Ga0105244_10032495 3300009036 Bacteria 2762
39 Ga0105240_10103811 3300009093 Bacteria 3452
40 Ga0105240_10252401 3300009093 Bacteria 2039
41 Ga0105249_10060276 3300009553 Bacteria 3481
42 Ga0105239_10087582 3300010375 Bacteria 3433
43 Ga0157371_10134557 3300013102 Bacteria 1760
44 Ga0157370_10014360 3300013104 Bacteria 8100
45 Ga0157369_10117488 3300013105 Bacteria 2823
46 Ga0157372_10171696 3300013307 Bacteria 2509
47 Ga0163163_10072241 3300014325 Bacteria 3439
48 Ga0157379_10062271 3300014968 Bacteria 3337
49 Ga0213872_10062445 3300021361 Bacteria 1683
50 Ga0209676_1000207 3300025292 Bacteria 130882
51 Ga0209758_1020218 3300025297 Bacteria 3163
52 Ga0209050_1000056 3300025298 Bacteria 338703
53 Ga0209050_1000088 3300025298 Bacteria 257442
54 Ga0209051_1002018 3300025303 Bacteria 15468
55 Ga0209257_1002342 3300025304 Bacteria 19063
56 Ga0207655_1001426 3300025728 Bacteria 22170
57 Ga0207655_1004607 3300025728 Bacteria 9698
58 Ga0207713_1000075 3300025735 Bacteria 179242
59 Ga0207713_1029948 3300025735 Bacteria 2429
60 Ga0207705_10138935 3300025909 Bacteria 1813
61 Ga0207707_10049595 3300025912 Bacteria 3658
62 Ga0207707_10118904 3300025912 Bacteria 2309
63 Ga0207695_10096688 3300025913 Bacteria 2955
64 Ga0207657_10145242 3300025919 Bacteria 1935
65 Ga0207657_10158635 3300025919 Bacteria 1838
66 Ga0207649_10124864 3300025920 Bacteria 1740
67 Ga0207700_10075610 3300025928 Bacteria 2610
68 Ga0207667_10085382 3300025949 Bacteria 3268
69 Ga0207667_10130445 3300025949 Bacteria 2589
70 Ga0207712_10030484 3300025961 Bacteria 3627
71 Ga0207639_10067283 3300026041 Bacteria 2787
72 Ga0207675_100080363 3300026118 Bacteria 3056
73 Ga0209371_1005770 3300027312 Bacteria 4799
74 Ga0209588_1000924 3300027671 Bacteria 7481
75 Ga0209588_1009125 3300027671 Bacteria 2957
76 Ga0207428_10083067 3300027907 Bacteria 2499
77 Ga0268264_10000038 3300028381 Bacteria 383623
78 Ga0268256_1005721 3300030500 Bacteria 4799
79 Ga0265340_10055110 3300031247 Bacteria 1916
80 Ga0265327_10003336 3300031251 Bacteria 15511
81 Ga0307509_10018296 3300031507 Bacteria 8037
82 Ga0307509_10018925 3300031507 Bacteria 7879
83 Ga0307408_100095821 3300031548 Bacteria 2250
84 Ga0307508_10061510 3300031616 Bacteria 3318
85 Ga0265314_10043330 3300031711 Bacteria 3201
86 Ga0316576_10086816 3300031727 Bacteria 2327
87 Ga0307414_10179833 3300032004 Bacteria 1700
88 Ga0307510_10058939 3300033180 Bacteria 3970
89 Ga0373943_0069899 3300035170 Bacteria 1775
90 Ga0373927_0145839 3300035695 Bacteria 1549
91 Ga0373947_0061080 3300035725 Bacteria 2290
92 Ga0373937_0163734 3300036401 Bacteria 2085
93 Ga0395899_0041753 3300037312 Bacteria 3426
94 Ga0395900_0075736 3300037418 Bacteria 3459
95 Ga0395898_0164144 3300037466 Bacteria 2124
96 Ga0395905_0160013 3300037471 Bacteria 2116
97 Ga0395901_0023665 3300038443 Bacteria 6297
98 Ga0395901_0057484 3300038443 Bacteria 4045
99 Ga0395901_0112270 3300038443 Bacteria 2862
100 Ga0436360_1133797 3300039438 Bacteria 3112
101 Ga0436361_0945545 3300039447 Bacteria 3071
102 Ga0436363_1312248 3300039450 Bacteria 3175
103 Ga0439432_018574 3300042006 Bacteria 2322
104 Ga0439452_000034 3300042010 Bacteria 167151
105 Ga0451576_0087480 3300045051 Bacteria 3241
106 Ga0495591_001267 3300046458 Bacteria 16169
107 Ga0495638_0079206 3300046460 Bacteria 1998
108 Ga0495630_0153652 3300046517 Bacteria 1751
109 Ga0495643_0027757 3300046522 Bacteria 3178
110 Ga0495643_0066380 3300046522 Bacteria 1903
111 Ga0495648_0061664 3300046524 Bacteria 2226
112 Ga0495611_0066376 3300046648 Bacteria 1645
113 Ga0495672_0024164 3300047320 Bacteria 3920
114 Ga0495672_0054706 3300047320 Bacteria 2331
115 Ga0495686_0022726 3300047472 Bacteria 4146
116 Ga0496102_0099408 3300048905 Bacteria 2700
117 Ga0496106_0034498 3300048909 Bacteria 3779
118 Ga0496108_0110012 3300048911 Bacteria 2355
119 Ga0496109_0081833 3300048912 Bacteria 2975
120 Ga0496110_0084411 3300048913 Bacteria 2834
121 Ga0496112_0087960 3300048915 Bacteria 3074
122 Ga0496113_0170100 3300048916 Bacteria 1725
123 Ga0496117_0045589 3300048920 Bacteria 3165
124 Ga0496118_0052427 3300048921 Bacteria 3111
125 Ga0496121_0105378 3300048924 Bacteria 2164
126 Ga0496126_0064930 3300048929 Bacteria 3268
127 Ga0495678_018408 3300049459 Bacteria 3141
128 Ga0501047_0058812 3300049581 Bacteria 3713
129 nmdc:mga0yw44_73614_c1 3300050492 Bacteria 2125
130 nmdc:mga05p37_185177_c1 3300050507 Bacteria 2532
131 nmdc:mga0n895_102730_c1 3300050512 Bacteria 2870
132 nmdc:mga0n895_113256_c1 3300050512 Plasmid 2730
133 nmdc:mga0rr50_82055_c1 3300050513 Bacteria 2490
134 nmdc:mga08x19_48768_c1 3300050514 Bacteria 2714
135 nmdc:mga0a205_120085_c1 3300050515 Bacteria 2528
136 Ga0495612_0034897 3300053078 Bacteria 2037
137 Ga0495619_0019288 3300053085 Bacteria 4334
138 Ga0500566_0000217 3300053094 Bacteria 30609
139 Ga0500556_0008295 3300053104 Bacteria 2994
140 Ga0500572_000254 3300053111 Bacteria 19130
141 Ga0500559_0000404 3300053136 Bacteria 31039
142 Ga0500559_0007237 3300053136 Bacteria 4932
143 Ga0500573_0044789 3300053140 Bacteria 2551
144 Ga0500603_000061 3300053150 Bacteria 25055
145 Ga0500630_004696 3300053159 Bacteria 6646
146 Ga0500639_000131 3300053163 Bacteria 36069

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2869234852 2869236405 441
2 3300009036 Ga0105244_10004706 Ga0105244_100047067 442
3 3300025728 Ga0207655_1004607 Ga0207655_10046071 442
4 3300046522 Ga0495643_0066380 Ga0495643_0066380_32_1375 442
5 3300006871 Ga0075434_100115314 Ga0075434_1001153142 450
6 3300025920 Ga0207649_10124864 Ga0207649_101248642 452
7 iso_pu_bacteria 8016511872 8016512199 457
8 3300038443 Ga0395901_0057484 Ga0395901_0057484_2163_3587 462
9 3300049459 Ga0495678_018408 Ga0495678_018408_1235_2782 462
10 iso_pu_bacteria 8016511872 8016512191 464
11 3300005340 Ga0070689_100092912 Ga0070689_1000929121 471
12 3300005549 Ga0070704_100127673 Ga0070704_1001276731 471
13 3300005842 Ga0068858_100117780 Ga0068858_1001177802 471
14 3300010375 Ga0105239_10087582 Ga0105239_100875824 471
15 3300014325 Ga0163163_10072241 Ga0163163_100722414 471
16 3300014968 Ga0157379_10062271 Ga0157379_100622711 471
17 3300048905 Ga0496102_0099408 Ga0496102_0099408_1023_2552 471
18 3300048909 Ga0496106_0034498 Ga0496106_0034498_1896_3425 471
19 3300048911 Ga0496108_0110012 Ga0496108_0110012_589_2118 471
20 3300048912 Ga0496109_0081833 Ga0496109_0081833_1254_2783 471
21 3300048913 Ga0496110_0084411 Ga0496110_0084411_1123_2652 471
22 3300048915 Ga0496112_0087960 Ga0496112_0087960_386_1915 471
23 3300048916 Ga0496113_0170100 Ga0496113_0170100_66_1595 471
24 3300053140 Ga0500573_0044789 Ga0500573_0044789_273_1706 476
25 3300031247 Ga0265340_10055110 Ga0265340_100551102 479
26 3300038443 Ga0395901_0112270 Ga0395901_0112270_218_1696 481
27 3300003856 Ga0058692_1009662 Ga0058692_10096621 482
28 3300027312 Ga0209371_1005770 Ga0209371_10057703 482
29 3300030500 Ga0268256_1005721 Ga0268256_10057213 482
30 3300046522 Ga0495643_0027757 Ga0495643_0027757_154_1689 483
31 3300046524 Ga0495648_0061664 Ga0495648_0061664_332_1867 483
32 iso_pu_bacteria 2937848649 2937852641 483
33 3300013102 Ga0157371_10134557 Ga0157371_101345572 485
34 3300042006 Ga0439432_018574 Ga0439432_018574_566_2104 485
35 3300042010 Ga0439452_000034 Ga0439452_000034_86389_87927 485
36 3300035695 Ga0373927_0145839 Ga0373927_0145839_56_1519 486
37 3300005518 Ga0070699_100152631 Ga0070699_1001526311 487
38 3300006173 Ga0070716_100049988 Ga0070716_1000499881 487
39 3300037466 Ga0395898_0164144 Ga0395898_0164144_552_2090 487
40 3300037471 Ga0395905_0160013 Ga0395905_0160013_542_2080 487
41 3300025297 Ga0209758_1020218 Ga0209758_10202183 488
42 3300006028 Ga0070717_10083525 Ga0070717_100835253 489
43 3300006844 Ga0075428_100144001 Ga0075428_1001440011 489
44 3300006852 Ga0075433_10091620 Ga0075433_100916202 489
45 3300006871 Ga0075434_100104673 Ga0075434_1001046732 489
46 3300007076 Ga0075435_100087760 Ga0075435_1000877601 489
47 3300027907 Ga0207428_10083067 Ga0207428_100830671 489
48 3300036401 Ga0373937_0163734 Ga0373937_0163734_82_1620 489
49 3300050492 nmdc:mga0yw44_73614_c1 nmdc:mga0yw44_73614_c1_414_1949 489
50 3300050507 nmdc:mga05p37_185177_c1 nmdc:mga05p37_185177_c1_55_1593 489
51 3300050512 nmdc:mga0n895_102730_c1 nmdc:mga0n895_102730_c1_1007_2545 489
52 3300050513 nmdc:mga0rr50_82055_c1 nmdc:mga0rr50_82055_c1_905_2443 489
53 3300050514 nmdc:mga08x19_48768_c1 nmdc:mga08x19_48768_c1_207_1745 489
54 3300050515 nmdc:mga0a205_120085_c1 nmdc:mga0a205_120085_c1_83_1621 489
55 3300053078 Ga0495612_0034897 Ga0495612_0034897_335_1873 489
56 3300053085 Ga0495619_0019288 Ga0495619_0019288_2282_3811 489
57 iso_pu_bacteria 2935883170 2935887858 493
58 iso_pu_bacteria 2775507074 2777024690 494
59 iso_pu_bacteria 2821118458 2821122159 494
60 iso_pu_bacteria 8054849141 8054853223 494
61 3300047320 Ga0495672_0054706 Ga0495672_0054706_220_1749 495
62 iso_pu_bacteria 2935616580 2935625125 495
63 iso_pu_bacteria 2935855204 2935863754 495
64 iso_pu_bacteria 2977942078 2977947988 495
65 3300031507 Ga0307509_10018925 Ga0307509_100189254 496
66 3300009011 Ga0105251_10000223 Ga0105251_1000022334 498
67 3300009011 Ga0105251_10036246 Ga0105251_100362461 498
68 3300009036 Ga0105244_10032495 Ga0105244_100324951 498
69 3300013104 Ga0157370_10014360 Ga0157370_100143605 498
70 3300013105 Ga0157369_10117488 Ga0157369_101174882 498
71 3300025728 Ga0207655_1001426 Ga0207655_100142618 498
72 3300025735 Ga0207713_1000075 Ga0207713_100007526 498
73 3300025735 Ga0207713_1029948 Ga0207713_10299481 498
74 3300032004 Ga0307414_10179833 Ga0307414_101798331 498
75 3300046458 Ga0495591_001267 Ga0495591_001267_12799_14337 498
76 3300048920 Ga0496117_0045589 Ga0496117_0045589_189_1718 499
77 3300048921 Ga0496118_0052427 Ga0496118_0052427_1501_3030 499
78 3300048924 Ga0496121_0105378 Ga0496121_0105378_491_2020 499
79 iso_pu_bacteria 8016583857 8016590359 499
80 3300005327 Ga0070658_10074697 Ga0070658_100746971 501
81 3300005339 Ga0070660_100076459 Ga0070660_1000764592 501
82 3300005539 Ga0068853_100201368 Ga0068853_1002013682 501
83 3300005563 Ga0068855_100128099 Ga0068855_1001280992 501
84 3300005563 Ga0068855_100291522 Ga0068855_1002915222 501
85 3300025909 Ga0207705_10138935 Ga0207705_101389352 501
86 3300025919 Ga0207657_10158635 Ga0207657_101586352 501
87 3300025949 Ga0207667_10085382 Ga0207667_100853821 501
88 3300025949 Ga0207667_10130445 Ga0207667_101304451 501
89 3300026041 Ga0207639_10067283 Ga0207639_100672831 501
90 3300037312 Ga0395899_0041753 Ga0395899_0041753_330_1874 502
91 3300037418 Ga0395900_0075736 Ga0395900_0075736_824_2368 502
92 3300038443 Ga0395901_0023665 Ga0395901_0023665_1339_2883 502
93 3300038443 Ga0395901_0023665 Ga0395901_0023665_4020_5564 502
94 iso_pu_bacteria 2757320392 2757572730 502
95 3300007265 Ga0099794_10020567 Ga0099794_100205673 503
96 3300013307 Ga0157372_10171696 Ga0157372_101716962 503
97 3300025912 Ga0207707_10118904 Ga0207707_101189041 503
98 3300031727 Ga0316576_10086816 Ga0316576_100868162 503
99 3300046517 Ga0495630_0153652 Ga0495630_0153652_157_1698 503
100 iso_pu_bacteria 2824704595 2824706329 503
101 3300031548 Ga0307408_100095821 Ga0307408_1000958212 504
102 3300045051 Ga0451576_0087480 Ga0451576_0087480_934_2478 504
103 iso_pu_bacteria 2513237098 2513677684 504
104 iso_pu_bacteria 2513237098 2513678016 504
105 iso_pu_bacteria 2513237098 2513678631 504
106 iso_pu_bacteria 2513237098 2513678663 504
107 iso_pu_bacteria 2643221623 2644129030 504
108 iso_pu_bacteria 2824617872 2824619945 504
109 iso_pu_bacteria 2824626560 2824628711 504
110 iso_pu_bacteria 2824635225 2824636503 504
111 iso_pu_bacteria 2824644064 2824645804 504
112 iso_pu_bacteria 2824714736 2824716116 504
113 iso_pu_bacteria 2824723954 2824725842 504
114 iso_pu_bacteria 2838122688 2838130566 504
115 iso_pu_bacteria 2841941048 2841947530 504
116 iso_pu_bacteria 2841983080 2841986742 504
117 iso_pu_bacteria 2847930680 2847932685 504
118 iso_pu_bacteria 2871451962 2871457622 504
119 iso_pu_bacteria 2874109183 2874111360 504
120 iso_pu_bacteria 2878730984 2878734786 504
121 iso_pu_bacteria 2885374607 2885382044 504
122 iso_pu_bacteria 2903513507 2903518536 504
123 iso_pu_bacteria 2903748898 2903755042 504
124 iso_pu_bacteria 2904690495 2904695290 504
125 iso_pu_bacteria 2906610324 2906611330 504
126 iso_pu_bacteria 2922368715 2922372011 504
127 iso_pu_bacteria 2922393267 2922397932 504
128 iso_pu_bacteria 2932801729 2932803917 504
129 iso_pu_bacteria 2932809354 2932815974 504
130 iso_pu_bacteria 2932809354 2932815980 504
131 iso_pu_bacteria 2932818245 2932825006 504
132 iso_pu_bacteria 2932818245 2932827870 504
133 iso_pu_bacteria 2932818245 2932828117 504
134 iso_pu_bacteria 2932828146 2932834917 504
135 iso_pu_bacteria 2932828146 2932834920 504
136 iso_pu_bacteria 2932828146 2932834923 504
137 iso_pu_bacteria 2935630451 2935637289 504
138 iso_pu_bacteria 2935638405 2935646643 504
139 iso_pu_bacteria 2935760218 2935767006 504
140 iso_pu_bacteria 2935760218 2935769157 504
141 iso_pu_bacteria 2935769743 2935770542 504
142 iso_pu_bacteria 2935801545 2935809639 504
143 iso_pu_bacteria 2935810662 2935818606 504
144 iso_pu_bacteria 2935827899 2935835909 504
145 iso_pu_bacteria 2935992306 2936000382 504
146 iso_pu_bacteria 2936002035 2936010720 504
147 iso_pu_bacteria 2936037263 2936045329 504
148 iso_pu_bacteria 2941507105 2941513978 504
149 iso_pu_bacteria 2941515067 2941521939 504
150 iso_pu_bacteria 2941523033 2941529608 504
151 iso_pu_bacteria 2941531003 2941538476 504
152 iso_pu_bacteria 8002285264 8002286980 504
153 iso_pu_bacteria 8017057580 8017066828 504
154 iso_pu_bacteria 8017057580 8017066831 504
155 iso_pu_bacteria 8017057580 8017066834 504
156 3300031711 Ga0265314_10043330 Ga0265314_100433302 505
157 3300005937 Ga0081455_10060561 Ga0081455_100605614 506
158 3300005436 Ga0070713_100062945 Ga0070713_1000629454 507
159 3300005468 Ga0070707_100077921 Ga0070707_1000779213 507
160 3300005843 Ga0068860_100002435 Ga0068860_1000024356 507
161 3300006844 Ga0075428_100338932 Ga0075428_1003389321 507
162 3300007265 Ga0099794_10017911 Ga0099794_100179113 507
163 3300009093 Ga0105240_10103811 Ga0105240_101038113 507
164 3300009093 Ga0105240_10252401 Ga0105240_102524012 507
165 3300025913 Ga0207695_10096688 Ga0207695_100966882 507
166 3300025928 Ga0207700_10075610 Ga0207700_100756103 507
167 3300027671 Ga0209588_1009125 Ga0209588_10091253 507
168 3300028381 Ga0268264_10000038 Ga0268264_1000003856 507
169 3300031251 Ga0265327_10003336 Ga0265327_100033364 507
170 3300035170 Ga0373943_0069899 Ga0373943_0069899_130_1659 507
171 3300035725 Ga0373947_0061080 Ga0373947_0061080_712_2241 507
172 3300047472 Ga0495686_0022726 Ga0495686_0022726_2034_3557 507
173 3300050512 nmdc:mga0n895_113256_c1 nmdc:mga0n895_113256_c1_66_1619 507
174 3300053136 Ga0500559_0007237 Ga0500559_0007237_410_1933 507
175 3300003781 Ga0055536_1013566 Ga0055536_10135663 508
176 3300003791 Ga0055530_10012668 Ga0055530_100126681 508
177 3300003794 Ga0055531_10011923 Ga0055531_100119232 508
178 3300005347 Ga0070668_100035538 Ga0070668_1000355382 508
179 3300005458 Ga0070681_10013437 Ga0070681_100134379 508
180 3300005719 Ga0068861_100053429 Ga0068861_1000534293 508
181 3300005844 Ga0068862_100074816 Ga0068862_1000748162 508
182 3300005983 Ga0081540_1028342 Ga0081540_10283421 508
183 3300005985 Ga0081539_10015282 Ga0081539_100152823 508
184 3300007265 Ga0099794_10012019 Ga0099794_100120194 508
185 3300009553 Ga0105249_10060276 Ga0105249_100602764 508
186 3300021361 Ga0213872_10062445 Ga0213872_100624451 508
187 3300025292 Ga0209676_1000207 Ga0209676_1000207137 508
188 3300025298 Ga0209050_1000056 Ga0209050_1000056137 508
189 3300025298 Ga0209050_1000088 Ga0209050_100008853 508
190 3300025303 Ga0209051_1002018 Ga0209051_100201811 508
191 3300025304 Ga0209257_1002342 Ga0209257_100234215 508
192 3300025912 Ga0207707_10049595 Ga0207707_100495953 508
193 3300025919 Ga0207657_10145242 Ga0207657_101452421 508
194 3300025961 Ga0207712_10030484 Ga0207712_100304841 508
195 3300026118 Ga0207675_100080363 Ga0207675_1000803633 508
196 3300027671 Ga0209588_1000924 Ga0209588_10009246 508
197 3300031507 Ga0307509_10018296 Ga0307509_100182961 508
198 3300031616 Ga0307508_10061510 Ga0307508_100615102 508
199 3300033180 Ga0307510_10058939 Ga0307510_100589392 508
200 3300039438 Ga0436360_1133797 Ga0436360_1133797_1328_2857 508
201 3300039447 Ga0436361_0945545 Ga0436361_0945545_179_1708 508
202 3300039450 Ga0436363_1312248 Ga0436363_1312248_90_1619 508
203 3300046460 Ga0495638_0079206 Ga0495638_0079206_381_1910 508
204 3300046648 Ga0495611_0066376 Ga0495611_0066376_83_1612 508
205 3300047320 Ga0495672_0024164 Ga0495672_0024164_1496_3025 508
206 3300048929 Ga0496126_0064930 Ga0496126_0064930_43_1569 508
207 3300049581 Ga0501047_0058812 Ga0501047_0058812_21_1559 508
208 3300053094 Ga0500566_0000217 Ga0500566_0000217_22648_24183 508
209 3300053104 Ga0500556_0008295 Ga0500556_0008295_29_1558 508
210 3300053111 Ga0500572_000254 Ga0500572_000254_2848_4383 508
211 3300053136 Ga0500559_0000404 Ga0500559_0000404_5261_6796 508
212 3300053150 Ga0500603_000061 Ga0500603_000061_7369_8904 508
213 3300053159 Ga0500630_004696 Ga0500630_004696_1643_3178 508
214 3300053163 Ga0500639_000131 Ga0500639_000131_12016_13551 508
215 iso_pu_bacteria 2510065059 2510316104 508
216 iso_pu_bacteria 2615840698 2616556389 508
217 iso_pu_bacteria 2970510686 2970513912 508
218 iso_pu_bacteria 3004211236 3004212463 508
219 iso_pu_bacteria 3004218560 3004224182 508
220 iso_pu_bacteria 3004232784 3004239948 508

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03050

DDE_Tnp_IS66

Transposase IS66 family

169

456

0.99

PF13005

zf-IS66

zinc-finger binding domain of transposase IS66

112

155

0.98

PF13007

LZ_Tnp_IS66

Transposase C of IS166 homeodomain

36

105

0.96

PF13817

DDE_Tnp_IS66_C

IS66 C-terminal element

462

494

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f9l-assembly1.cif.gz_A 3d structure of inactive human rab11b gtpase 0.6475 120 143
4d0g-assembly1.cif.gz_A structure of rab14 in complex with rab-coupling protein (rcp) 0.6443 120 143
2ocb-assembly1.cif.gz_A crystal structure of human rab9b in complex with a gtp analogue 0.6277 99 143
3nkv-assembly2.cif.gz_B crystal structure of rab1b covalently modified with amp at y77 0.6249 101 143
4c4p-assembly1.cif.gz_A crystal structure of wild-type rab11 complexed to fip2 0.6157 101 143
ID Description Score Start End Superfamily
af_A0A0G2KIN3_3_115_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6835 120 143 3.40.50.300
af_Q54YI4_2_175_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6563 120 143 3.40.50.300
af_Q58448_7_221_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6529 121 143 3.40.50.300
4d0gA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6443 120 143 3.40.50.300
af_Q4CWB6_584_691_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.6358 172 226 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A062US48-F1-model_v4 Transposase IS66 central domain-containing protein 0.9766 328 419
AF-A0A6A4UMA9-F1-model_v4 Transposase 0.9728 220 502
AF-A0A6L3AR65-F1-model_v4 IS66 family transposase 0.9715 235 469
AF-A0A2X1KUN6-F1-model_v4 Putative transposase 0.9705 323 426
AF-A0A3L2NW62-F1-model_v4 deleted 0.9679 176 425

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pLDDT pTM Quality
79.51 0.69 Medium
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Predicted Structure (AlphaFold2)

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