F332359
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 220 | 121 | 220 | 469 |
Family's Representative Sequence
| Representative Sequence | 3300026078|Ga0207702_10063068|Ga0207702_100630683 |
| Length | 492 |
| Sequence | MPGHTFDFGPWALDFRRWTMKLPPVLVVDDEKNMRLSLKTMLSDDGYLVQTAESAEEAQVMLTRETFFMVITDARLGGMNGYEFLANLHKLWPEIPALMITAFATPKLAVEAIRAGAIDYLPKPFAPEELLHAVSRCAERYRLLQENADLRARAGGASQLEDIVGEAAKMRAVRELIQTIAPTDARVLILGESGTGKELVAGAVHSLSNRRKARYVRINCAAIPENLLESELFGYEKGAFTGAVKQKPGLVEEANGGTIFLDEIADMSRPLQAKLLRFLEDGSFTRVGGTQEMKVNVRLIAATNRDIVQAIRDGNFREDLFHRLNVVQFRLPPLREREDDVPLLAEHFLAHFSMTMNKRVKALSPAAARMLQSHHWPGNVRELKNVIERALILERADEIQASSLPDFQVEAQLHKSATPKMTGSESLDELVTSFERQLIADILERNGFNLGKTAEQLKISRHALRYRMQRLNLTLPGESDDEKSGGGKEGLQ |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 3 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 4 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 11 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 12 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 13 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 14 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 15 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 16 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 17 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 39 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 40 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 41 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 42 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 43 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 44 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 45 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 46 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 47 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 48 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 49 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 50 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 51 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 52 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 53 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 54 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 55 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 56 | 3300034816 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 | Metagenome | Rhizosphere |
| 57 | 3300035084 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 | Metagenome | Rhizosphere |
| 58 | 3300035085 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 | Metagenome | Rhizosphere |
| 59 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 60 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 61 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 62 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 63 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 64 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 65 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 66 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 67 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 68 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 69 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 70 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 71 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 72 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 73 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 74 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 75 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 76 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 77 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 78 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 79 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 108 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0.45 |
| Rhizosphere | 99.55 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070666_10016886 | 3300005335 | Unclassified | 4674 |
| 2 | Ga0070689_100009225 | 3300005340 | Bacteria | 6986 |
| 3 | Ga0070689_100096872 | 3300005340 | Bacteria | 2332 |
| 4 | Ga0070692_10034664 | 3300005345 | Bacteria | 2551 |
| 5 | Ga0070714_100001234 | 3300005435 | Bacteria | 18443 |
| 6 | Ga0070711_100025944 | 3300005439 | Bacteria | 3837 |
| 7 | Ga0070694_100004607 | 3300005444 | Bacteria | 8294 |
| 8 | Ga0070708_100110787 | 3300005445 | Bacteria | 2523 |
| 9 | Ga0070686_100061182 | 3300005544 | Bacteria | 2432 |
| 10 | Ga0070704_100006285 | 3300005549 | Bacteria | 6993 |
| 11 | Ga0068855_100020678 | 3300005563 | Bacteria | 7893 |
| 12 | Ga0068857_100229961 | 3300005577 | Bacteria | 1696 |
| 13 | Ga0068856_100000079 | 3300005614 | Bacteria | 92486 |
| 14 | Ga0068856_100018914 | 3300005614 | Bacteria | 6681 |
| 15 | Ga0068856_100146925 | 3300005614 | Bacteria | 2365 |
| 16 | Ga0068864_100081627 | 3300005618 | Bacteria | 2835 |
| 17 | Ga0081455_10146112 | 3300005937 | Bacteria | 1829 |
| 18 | Ga0075428_100083029 | 3300006844 | Bacteria | 3496 |
| 19 | Ga0075431_100017693 | 3300006847 | Bacteria | 7247 |
| 20 | Ga0075431_100085268 | 3300006847 | Bacteria | 3260 |
| 21 | Ga0105240_10018563 | 3300009093 | Bacteria | 9335 |
| 22 | Ga0105240_10060245 | 3300009093 | Bacteria | 4732 |
| 23 | Ga0105240_10095009 | 3300009093 | Bacteria | 3636 |
| 24 | Ga0105240_10185194 | 3300009093 | Bacteria | 2453 |
| 25 | Ga0111539_10010528 | 3300009094 | Bacteria | 11643 |
| 26 | Ga0111539_10052923 | 3300009094 | Bacteria | 4832 |
| 27 | Ga0111539_10377737 | 3300009094 | Bacteria | 1650 |
| 28 | Ga0105248_10200729 | 3300009177 | Bacteria | 2247 |
| 29 | Ga0105238_10008351 | 3300009551 | Bacteria | 10361 |
| 30 | Ga0105238_10060170 | 3300009551 | Bacteria | 3804 |
| 31 | Ga0105249_10113341 | 3300009553 | Bacteria | 2566 |
| 32 | Ga0157378_10131007 | 3300013297 | Bacteria | 2321 |
| 33 | Ga0157375_10000041 | 3300013308 | Bacteria | 162765 |
| 34 | Ga0157375_10206469 | 3300013308 | Bacteria | 2121 |
| 35 | Ga0163163_10000027 | 3300014325 | Bacteria | 176970 |
| 36 | Ga0207705_10154834 | 3300025909 | Bacteria | 1719 |
| 37 | Ga0207707_10032057 | 3300025912 | Bacteria | 4600 |
| 38 | Ga0207695_10172968 | 3300025913 | Bacteria | 2084 |
| 39 | Ga0207663_10013277 | 3300025916 | Bacteria | 4474 |
| 40 | Ga0207646_10104467 | 3300025922 | Bacteria | 2541 |
| 41 | Ga0207694_10016516 | 3300025924 | Bacteria | 5574 |
| 42 | Ga0207694_10044471 | 3300025924 | Bacteria | 3429 |
| 43 | Ga0207694_10214955 | 3300025924 | Bacteria | 1567 |
| 44 | Ga0207664_10100893 | 3300025929 | Bacteria | 2384 |
| 45 | Ga0207670_10008210 | 3300025936 | Bacteria | 5877 |
| 46 | Ga0207670_10024612 | 3300025936 | Bacteria | 3765 |
| 47 | Ga0207667_10021924 | 3300025949 | Bacteria | 7070 |
| 48 | Ga0207667_10110886 | 3300025949 | Bacteria | 2830 |
| 49 | Ga0207712_10022621 | 3300025961 | Bacteria | 4141 |
| 50 | Ga0207702_10003055 | 3300026078 | Bacteria | 15552 |
| 51 | Ga0207702_10063068 | 3300026078 | Bacteria | 3168 |
| 52 | Ga0207676_10089614 | 3300026095 | Bacteria | 2522 |
| 53 | Ga0207674_10070796 | 3300026116 | Bacteria | 3506 |
| 54 | Ga0207428_10056620 | 3300027907 | Bacteria | 3114 |
| 55 | Ga0265337_1000067 | 3300028556 | Bacteria | 48544 |
| 56 | Ga0265337_1000102 | 3300028556 | Bacteria | 42139 |
| 57 | Ga0265337_1000754 | 3300028556 | Bacteria | 17075 |
| 58 | Ga0265337_1004515 | 3300028556 | Bacteria | 5758 |
| 59 | Ga0265337_1005310 | 3300028556 | Bacteria | 5144 |
| 60 | Ga0265337_1023781 | 3300028556 | Bacteria | 1881 |
| 61 | Ga0265319_1000001 | 3300028563 | Bacteria | 549513 |
| 62 | Ga0265334_10003555 | 3300028573 | Bacteria | 7066 |
| 63 | Ga0265334_10010313 | 3300028573 | Bacteria | 3945 |
| 64 | Ga0265323_10000212 | 3300028653 | Bacteria | 34562 |
| 65 | Ga0265323_10016297 | 3300028653 | Bacteria | 2904 |
| 66 | Ga0265323_10019533 | 3300028653 | Bacteria | 2612 |
| 67 | Ga0265323_10043144 | 3300028653 | Bacteria | 1629 |
| 68 | Ga0265336_10000913 | 3300028666 | Bacteria | 14984 |
| 69 | Ga0265338_10000105 | 3300028800 | Bacteria | 156108 |
| 70 | Ga0265338_10000135 | 3300028800 | Bacteria | 135743 |
| 71 | Ga0265338_10000242 | 3300028800 | Bacteria | 101378 |
| 72 | Ga0265338_10000483 | 3300028800 | Bacteria | 71199 |
| 73 | Ga0265338_10001348 | 3300028800 | Bacteria | 39992 |
| 74 | Ga0265338_10002530 | 3300028800 | Bacteria | 27106 |
| 75 | Ga0265338_10002676 | 3300028800 | Bacteria | 26200 |
| 76 | Ga0265338_10002770 | 3300028800 | Bacteria | 25657 |
| 77 | Ga0265338_10003273 | 3300028800 | Bacteria | 23015 |
| 78 | Ga0265338_10005718 | 3300028800 | Bacteria | 16079 |
| 79 | Ga0265338_10006002 | 3300028800 | Bacteria | 15610 |
| 80 | Ga0265338_10006094 | 3300028800 | Bacteria | 15481 |
| 81 | Ga0265338_10006567 | 3300028800 | Bacteria | 14760 |
| 82 | Ga0265338_10010747 | 3300028800 | Bacteria | 10683 |
| 83 | Ga0265338_10012239 | 3300028800 | Bacteria | 9798 |
| 84 | Ga0265338_10015708 | 3300028800 | Bacteria | 8297 |
| 85 | Ga0265338_10016476 | 3300028800 | Bacteria | 8039 |
| 86 | Ga0265338_10017186 | 3300028800 | Bacteria | 7814 |
| 87 | Ga0265338_10032684 | 3300028800 | Bacteria | 5066 |
| 88 | Ga0265338_10033888 | 3300028800 | Bacteria | 4947 |
| 89 | Ga0265338_10056476 | 3300028800 | Bacteria | 3481 |
| 90 | Ga0265338_10084310 | 3300028800 | Bacteria | 2654 |
| 91 | Ga0265338_10116175 | 3300028800 | Bacteria | 2144 |
| 92 | Ga0265338_10134549 | 3300028800 | Bacteria | 1946 |
| 93 | Ga0265338_10166587 | 3300028800 | Bacteria | 1695 |
| 94 | Ga0265324_10006134 | 3300029957 | Bacteria | 5069 |
| 95 | Ga0265324_10006652 | 3300029957 | Bacteria | 4780 |
| 96 | Ga0265324_10041082 | 3300029957 | Bacteria | 1601 |
| 97 | Ga0265332_10035882 | 3300031238 | Bacteria | 2153 |
| 98 | Ga0265320_10000711 | 3300031240 | Bacteria | 25479 |
| 99 | Ga0265320_10000870 | 3300031240 | Bacteria | 22823 |
| 100 | Ga0265320_10021977 | 3300031240 | Bacteria | 3421 |
| 101 | Ga0265325_10023806 | 3300031241 | Bacteria | 3338 |
| 102 | Ga0265329_10001970 | 3300031242 | Bacteria | 9631 |
| 103 | Ga0265340_10000287 | 3300031247 | Bacteria | 26530 |
| 104 | Ga0265339_10059040 | 3300031249 | Bacteria | 2069 |
| 105 | Ga0265327_10002080 | 3300031251 | Bacteria | 22363 |
| 106 | Ga0265327_10007800 | 3300031251 | Bacteria | 8155 |
| 107 | Ga0265316_10000659 | 3300031344 | Bacteria | 38376 |
| 108 | Ga0265316_10003620 | 3300031344 | Bacteria | 15574 |
| 109 | Ga0265316_10012416 | 3300031344 | Bacteria | 7640 |
| 110 | Ga0265316_10097102 | 3300031344 | Bacteria | 2243 |
| 111 | Ga0265314_10000079 | 3300031711 | Bacteria | 144215 |
| 112 | Ga0265314_10005739 | 3300031711 | Bacteria | 11136 |
| 113 | Ga0265314_10018076 | 3300031711 | Bacteria | 5510 |
| 114 | Ga0307410_10191154 | 3300031852 | Bacteria | 1557 |
| 115 | Ga0373930_0001267 | 3300034816 | Bacteria | 3734 |
| 116 | Ga0373928_0000011 | 3300035084 | Bacteria | 31163 |
| 117 | Ga0373929_0013853 | 3300035085 | Bacteria | 1551 |
| 118 | Ga0373944_0000019 | 3300035089 | Bacteria | 29600 |
| 119 | Ga0373951_0000712 | 3300035091 | Bacteria | 9135 |
| 120 | Ga0373932_0000001 | 3300035112 | Bacteria | 1459067 |
| 121 | Ga0373945_0025456 | 3300035116 | Bacteria | 2055 |
| 122 | Ga0373954_0000157 | 3300035118 | Bacteria | 24231 |
| 123 | Ga0373956_0012213 | 3300035119 | Bacteria | 3554 |
| 124 | Ga0373943_0050603 | 3300035170 | Bacteria | 2042 |
| 125 | Ga0373946_0015482 | 3300035171 | Bacteria | 2893 |
| 126 | Ga0373962_0000055 | 3300035242 | Bacteria | 25343 |
| 127 | Ga0373931_0000004 | 3300035691 | Bacteria | 535140 |
| 128 | Ga0373935_0022673 | 3300035692 | Bacteria | 3853 |
| 129 | Ga0373927_0016466 | 3300035695 | Bacteria | 4875 |
| 130 | Ga0373927_0021820 | 3300035695 | Bacteria | 4196 |
| 131 | Ga0373947_0012154 | 3300035725 | Bacteria | 4929 |
| 132 | Ga0373947_0013998 | 3300035725 | Bacteria | 4598 |
| 133 | Ga0373937_0018629 | 3300036401 | Bacteria | 6202 |
| 134 | Ga0373925_0000046 | 3300037068 | Bacteria | 131256 |
| 135 | Ga0373925_0004773 | 3300037068 | Bacteria | 10207 |
| 136 | Ga0373925_0005368 | 3300037068 | Bacteria | 9556 |
| 137 | Ga0373925_0250679 | 3300037068 | Bacteria | 1420 |
| 138 | Ga0395900_0128493 | 3300037418 | Bacteria | 2598 |
| 139 | Ga0395905_0027903 | 3300037471 | Bacteria | 5322 |
| 140 | Ga0451577_0001593 | 3300042876 | Bacteria | 29571 |
| 141 | Ga0451577_0007610 | 3300042876 | Bacteria | 10625 |
| 142 | Ga0451577_0076361 | 3300042876 | Bacteria | 2987 |
| 143 | Ga0453684_0001125 | 3300044712 | Bacteria | 83786 |
| 144 | Ga0453684_0018070 | 3300044712 | Bacteria | 10854 |
| 145 | Ga0453684_0018587 | 3300044712 | Bacteria | 10655 |
| 146 | Ga0453684_0031086 | 3300044712 | Bacteria | 7518 |
| 147 | Ga0451576_0025805 | 3300045051 | Bacteria | 6330 |
| 148 | Ga0451576_0045167 | 3300045051 | Bacteria | 4641 |
| 149 | Ga0451576_0125084 | 3300045051 | Bacteria | 2679 |
| 150 | Ga0451576_0182000 | 3300045051 | Bacteria | 2194 |
| 151 | Ga0495592_0000008 | 3300046454 | Bacteria | 175382 |
| 152 | Ga0495629_0019403 | 3300046459 | Bacteria | 4857 |
| 153 | Ga0495641_0012423 | 3300046461 | Bacteria | 4765 |
| 154 | Ga0495651_0044517 | 3300046462 | Bacteria | 3440 |
| 155 | Ga0495582_0029976 | 3300046473 | Bacteria | 2986 |
| 156 | Ga0495639_0025457 | 3300046475 | Bacteria | 2610 |
| 157 | Ga0495639_0056836 | 3300046475 | Bacteria | 1787 |
| 158 | Ga0495662_0011099 | 3300046476 | Bacteria | 4402 |
| 159 | Ga0495664_0004421 | 3300046477 | Bacteria | 7697 |
| 160 | Ga0495664_0078812 | 3300046477 | Bacteria | 1974 |
| 161 | Ga0495618_0001265 | 3300046514 | Bacteria | 17122 |
| 162 | Ga0495618_0007461 | 3300046514 | Bacteria | 6614 |
| 163 | Ga0495628_0000046 | 3300046516 | Bacteria | 97902 |
| 164 | Ga0495630_0000006 | 3300046517 | Bacteria | 400463 |
| 165 | Ga0495630_0000031 | 3300046517 | Bacteria | 135085 |
| 166 | Ga0495666_0008249 | 3300046526 | Bacteria | 5220 |
| 167 | Ga0495666_0074063 | 3300046526 | Bacteria | 1615 |
| 168 | Ga0495652_0009622 | 3300046529 | Bacteria | 8777 |
| 169 | Ga0495652_0067474 | 3300046529 | Bacteria | 2999 |
| 170 | Ga0495640_0010170 | 3300046533 | Bacteria | 7286 |
| 171 | Ga0495640_0017252 | 3300046533 | Bacteria | 5384 |
| 172 | Ga0495640_0028464 | 3300046533 | Bacteria | 4023 |
| 173 | Ga0495586_0000016 | 3300046535 | Bacteria | 126380 |
| 174 | Ga0495586_0000121 | 3300046535 | Bacteria | 47320 |
| 175 | Ga0495586_0001531 | 3300046535 | Bacteria | 12753 |
| 176 | Ga0495586_0008304 | 3300046535 | Bacteria | 5528 |
| 177 | Ga0495586_0008950 | 3300046535 | Bacteria | 5328 |
| 178 | Ga0495645_0014455 | 3300046543 | Bacteria | 5600 |
| 179 | Ga0495645_0114100 | 3300046543 | Bacteria | 1909 |
| 180 | Ga0495645_0121344 | 3300046543 | Bacteria | 1840 |
| 181 | Ga0495667_0053668 | 3300046559 | Bacteria | 2654 |
| 182 | Ga0495634_0000333 | 3300046642 | Bacteria | 45524 |
| 183 | Ga0495634_0007791 | 3300046642 | Bacteria | 8007 |
| 184 | Ga0495634_0103432 | 3300046642 | Bacteria | 1838 |
| 185 | Ga0495657_0081665 | 3300046675 | Bacteria | 2090 |
| 186 | Ga0495599_0044620 | 3300046678 | Bacteria | 2780 |
| 187 | Ga0495647_0008861 | 3300046681 | Bacteria | 3390 |
| 188 | Ga0495658_0008697 | 3300046683 | Bacteria | 5041 |
| 189 | Ga0495658_0087725 | 3300046683 | Bacteria | 1838 |
| 190 | Ga0495613_0000939 | 3300046689 | Bacteria | 22337 |
| 191 | Ga0495613_0034829 | 3300046689 | Bacteria | 3738 |
| 192 | Ga0495624_0047601 | 3300046690 | Bacteria | 2725 |
| 193 | Ga0495674_0004035 | 3300047319 | Bacteria | 14210 |
| 194 | Ga0495674_0025978 | 3300047319 | Bacteria | 5360 |
| 195 | Ga0495676_0003921 | 3300047321 | Bacteria | 13529 |
| 196 | Ga0495676_0198824 | 3300047321 | Bacteria | 1394 |
| 197 | Ga0495680_0002012 | 3300047322 | Bacteria | 21331 |
| 198 | Ga0495677_0041225 | 3300047445 | Bacteria | 1689 |
| 199 | Ga0496115_0002604 | 3300048918 | Bacteria | 12946 |
| 200 | Ga0501031_0000475 | 3300049568 | Bacteria | 23374 |
| 201 | Ga0501031_0052957 | 3300049568 | Bacteria | 2644 |
| 202 | Ga0501033_0000930 | 3300049570 | Bacteria | 26737 |
| 203 | Ga0501033_0056707 | 3300049570 | Bacteria | 2895 |
| 204 | Ga0501033_0093312 | 3300049570 | Bacteria | 2201 |
| 205 | Ga0501034_0169236 | 3300049571 | Bacteria | 2153 |
| 206 | Ga0501037_0093515 | 3300049573 | Bacteria | 2174 |
| 207 | Ga0501039_0050719 | 3300049575 | Bacteria | 3211 |
| 208 | Ga0501046_0164070 | 3300049580 | Bacteria | 1670 |
| 209 | Ga0501047_0047047 | 3300049581 | Bacteria | 4169 |
| 210 | Ga0501035_0003667 | 3300049822 | Bacteria | 14637 |
| 211 | Ga0501044_0000686 | 3300049823 | Bacteria | 40958 |
| 212 | Ga0501044_0008932 | 3300049823 | Bacteria | 10955 |
| 213 | Ga0501044_0109118 | 3300049823 | Bacteria | 2777 |
| 214 | nmdc:mga09592_18328_c1 | 3300050508 | Bacteria | 5740 |
| 215 | nmdc:mga06r32_132156_c1 | 3300050510 | Bacteria | 2469 |
| 216 | nmdc:mga06r32_15291_c1 | 3300050510 | Bacteria | 6971 |
| 217 | nmdc:mga08y16_1393_c1 | 3300050511 | Bacteria | 12808 |
| 218 | nmdc:mga08y16_54902_c1 | 3300050511 | Bacteria | 4163 |
| 219 | nmdc:mga0a205_183567_c1 | 3300050515 | Bacteria | 1985 |
| 220 | Ga0495601_0031584 | 3300053077 | Bacteria | 3292 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049581 | Ga0501047_0047047 | Ga0501047_0047047_552_1877 | 411 |
| 2 | 3300037068 | Ga0373925_0250679 | Ga0373925_0250679_37_1284 | 413 |
| 3 | 3300035116 | Ga0373945_0025456 | Ga0373945_0025456_15_1289 | 423 |
| 4 | 3300047321 | Ga0495676_0198824 | Ga0495676_0198824_15_1313 | 430 |
| 5 | 3300037068 | Ga0373925_0005368 | Ga0373925_0005368_3073_4461 | 440 |
| 6 | 3300035170 | Ga0373943_0050603 | Ga0373943_0050603_643_2025 | 441 |
| 7 | 3300049573 | Ga0501037_0093515 | Ga0501037_0093515_727_2070 | 444 |
| 8 | 3300045051 | Ga0451576_0025805 | Ga0451576_0025805_3268_4701 | 445 |
| 9 | 3300046476 | Ga0495662_0011099 | Ga0495662_0011099_2752_4191 | 445 |
| 10 | 3300037471 | Ga0395905_0027903 | Ga0395905_0027903_12_1361 | 449 |
| 11 | 3300031711 | Ga0265314_10018076 | Ga0265314_100180762 | 450 |
| 12 | 3300047445 | Ga0495677_0041225 | Ga0495677_0041225_306_1679 | 450 |
| 13 | 3300034816 | Ga0373930_0001267 | Ga0373930_0001267_2202_3566 | 453 |
| 14 | 3300035084 | Ga0373928_0000011 | Ga0373928_0000011_5417_6781 | 453 |
| 15 | 3300035085 | Ga0373929_0013853 | Ga0373929_0013853_85_1449 | 453 |
| 16 | 3300035089 | Ga0373944_0000019 | Ga0373944_0000019_15889_17253 | 453 |
| 17 | 3300035091 | Ga0373951_0000712 | Ga0373951_0000712_3321_4685 | 453 |
| 18 | 3300035112 | Ga0373932_0000001 | Ga0373932_0000001_309178_310542 | 453 |
| 19 | 3300035171 | Ga0373946_0015482 | Ga0373946_0015482_1188_2552 | 453 |
| 20 | 3300035242 | Ga0373962_0000055 | Ga0373962_0000055_2215_3579 | 453 |
| 21 | 3300035691 | Ga0373931_0000004 | Ga0373931_0000004_309187_310551 | 453 |
| 22 | 3300035695 | Ga0373927_0016466 | Ga0373927_0016466_2330_3694 | 453 |
| 23 | 3300035725 | Ga0373947_0012154 | Ga0373947_0012154_3252_4616 | 453 |
| 24 | 3300037068 | Ga0373925_0000046 | Ga0373925_0000046_124926_126290 | 453 |
| 25 | 3300009551 | Ga0105238_10060170 | Ga0105238_100601703 | 454 |
| 26 | 3300025924 | Ga0207694_10044471 | Ga0207694_100444713 | 454 |
| 27 | 3300046543 | Ga0495645_0014455 | Ga0495645_0014455_3174_4559 | 454 |
| 28 | 3300053077 | Ga0495601_0031584 | Ga0495601_0031584_1686_3071 | 454 |
| 29 | 3300049568 | Ga0501031_0052957 | Ga0501031_0052957_1258_2628 | 456 |
| 30 | 3300009093 | Ga0105240_10185194 | Ga0105240_101851942 | 457 |
| 31 | 3300025912 | Ga0207707_10032057 | Ga0207707_100320573 | 457 |
| 32 | 3300035692 | Ga0373935_0022673 | Ga0373935_0022673_397_1827 | 457 |
| 33 | 3300035695 | Ga0373927_0021820 | Ga0373927_0021820_25_1455 | 457 |
| 34 | 3300035725 | Ga0373947_0013998 | Ga0373947_0013998_2095_3525 | 457 |
| 35 | 3300037068 | Ga0373925_0004773 | Ga0373925_0004773_336_1766 | 457 |
| 36 | 3300045051 | Ga0451576_0045167 | Ga0451576_0045167_1346_2788 | 457 |
| 37 | 3300046517 | Ga0495630_0000006 | Ga0495630_0000006_301344_302783 | 457 |
| 38 | 3300046477 | Ga0495664_0078812 | Ga0495664_0078812_472_1899 | 458 |
| 39 | 3300046529 | Ga0495652_0009622 | Ga0495652_0009622_1653_3080 | 458 |
| 40 | 3300046642 | Ga0495634_0103432 | Ga0495634_0103432_48_1475 | 459 |
| 41 | 3300046678 | Ga0495599_0044620 | Ga0495599_0044620_118_1545 | 459 |
| 42 | 3300047319 | Ga0495674_0025978 | Ga0495674_0025978_1552_2979 | 459 |
| 43 | 3300031852 | Ga0307410_10191154 | Ga0307410_101911542 | 462 |
| 44 | 3300042876 | Ga0451577_0007610 | Ga0451577_0007610_4151_5548 | 462 |
| 45 | 3300044712 | Ga0453684_0001125 | Ga0453684_0001125_61121_62518 | 462 |
| 46 | 3300005439 | Ga0070711_100025944 | Ga0070711_1000259442 | 463 |
| 47 | 3300005563 | Ga0068855_100020678 | Ga0068855_1000206785 | 463 |
| 48 | 3300005577 | Ga0068857_100229961 | Ga0068857_1002299612 | 463 |
| 49 | 3300005614 | Ga0068856_100000079 | Ga0068856_10000007911 | 463 |
| 50 | 3300013297 | Ga0157378_10131007 | Ga0157378_101310072 | 463 |
| 51 | 3300013308 | Ga0157375_10206469 | Ga0157375_102064692 | 463 |
| 52 | 3300025916 | Ga0207663_10013277 | Ga0207663_100132775 | 463 |
| 53 | 3300025949 | Ga0207667_10021924 | Ga0207667_100219244 | 463 |
| 54 | 3300026078 | Ga0207702_10003055 | Ga0207702_100030554 | 463 |
| 55 | 3300026116 | Ga0207674_10070796 | Ga0207674_100707963 | 463 |
| 56 | 3300031241 | Ga0265325_10023806 | Ga0265325_100238063 | 463 |
| 57 | 3300049568 | Ga0501031_0000475 | Ga0501031_0000475_9646_11040 | 463 |
| 58 | 3300049570 | Ga0501033_0000930 | Ga0501033_0000930_13187_14581 | 463 |
| 59 | 3300049570 | Ga0501033_0056707 | Ga0501033_0056707_1125_2516 | 463 |
| 60 | 3300049580 | Ga0501046_0164070 | Ga0501046_0164070_206_1597 | 463 |
| 61 | 3300049822 | Ga0501035_0003667 | Ga0501035_0003667_8001_9395 | 463 |
| 62 | 3300049823 | Ga0501044_0000686 | Ga0501044_0000686_21656_23050 | 463 |
| 63 | 3300049823 | Ga0501044_0008932 | Ga0501044_0008932_6838_8229 | 463 |
| 64 | 3300028556 | Ga0265337_1000067 | Ga0265337_100006739 | 464 |
| 65 | 3300028556 | Ga0265337_1005310 | Ga0265337_10053107 | 464 |
| 66 | 3300028800 | Ga0265338_10010747 | Ga0265338_100107478 | 464 |
| 67 | 3300028800 | Ga0265338_10012239 | Ga0265338_100122399 | 464 |
| 68 | 3300028800 | Ga0265338_10017186 | Ga0265338_100171869 | 464 |
| 69 | 3300046535 | Ga0495586_0008950 | Ga0495586_0008950_2712_4112 | 464 |
| 70 | 3300013308 | Ga0157375_10000041 | Ga0157375_1000004174 | 465 |
| 71 | 3300025949 | Ga0207667_10110886 | Ga0207667_101108863 | 465 |
| 72 | 3300028556 | Ga0265337_1000102 | Ga0265337_100010224 | 465 |
| 73 | 3300028556 | Ga0265337_1000754 | Ga0265337_100075419 | 465 |
| 74 | 3300028653 | Ga0265323_10000212 | Ga0265323_1000021214 | 465 |
| 75 | 3300028653 | Ga0265323_10016297 | Ga0265323_100162973 | 465 |
| 76 | 3300028653 | Ga0265323_10019533 | Ga0265323_100195333 | 465 |
| 77 | 3300028653 | Ga0265323_10043144 | Ga0265323_100431441 | 465 |
| 78 | 3300028666 | Ga0265336_10000913 | Ga0265336_1000091312 | 465 |
| 79 | 3300028800 | Ga0265338_10000242 | Ga0265338_1000024240 | 465 |
| 80 | 3300028800 | Ga0265338_10000483 | Ga0265338_1000048333 | 465 |
| 81 | 3300028800 | Ga0265338_10001348 | Ga0265338_1000134822 | 465 |
| 82 | 3300028800 | Ga0265338_10002676 | Ga0265338_100026769 | 465 |
| 83 | 3300028800 | Ga0265338_10003273 | Ga0265338_1000327311 | 465 |
| 84 | 3300028800 | Ga0265338_10005718 | Ga0265338_1000571814 | 465 |
| 85 | 3300028800 | Ga0265338_10006094 | Ga0265338_1000609410 | 465 |
| 86 | 3300028800 | Ga0265338_10084310 | Ga0265338_100843103 | 465 |
| 87 | 3300028800 | Ga0265338_10134549 | Ga0265338_101345493 | 465 |
| 88 | 3300029957 | Ga0265324_10006134 | Ga0265324_100061345 | 465 |
| 89 | 3300031238 | Ga0265332_10035882 | Ga0265332_100358823 | 465 |
| 90 | 3300031240 | Ga0265320_10000711 | Ga0265320_1000071121 | 465 |
| 91 | 3300031240 | Ga0265320_10000870 | Ga0265320_1000087015 | 465 |
| 92 | 3300031247 | Ga0265340_10000287 | Ga0265340_1000028710 | 465 |
| 93 | 3300031249 | Ga0265339_10059040 | Ga0265339_100590403 | 465 |
| 94 | 3300031344 | Ga0265316_10000659 | Ga0265316_1000065921 | 465 |
| 95 | 3300031344 | Ga0265316_10012416 | Ga0265316_100124164 | 465 |
| 96 | 3300028800 | Ga0265338_10000135 | Ga0265338_1000013574 | 466 |
| 97 | 3300005614 | Ga0068856_100146925 | Ga0068856_1001469252 | 467 |
| 98 | 3300028800 | Ga0265338_10032684 | Ga0265338_100326842 | 467 |
| 99 | 3300031251 | Ga0265327_10002080 | Ga0265327_1000208019 | 467 |
| 100 | 3300031251 | Ga0265327_10007800 | Ga0265327_100078005 | 467 |
| 101 | 3300028800 | Ga0265338_10116175 | Ga0265338_101161753 | 468 |
| 102 | 3300048918 | Ga0496115_0002604 | Ga0496115_0002604_4454_5866 | 468 |
| 103 | 3300028800 | Ga0265338_10000105 | Ga0265338_1000010578 | 469 |
| 104 | 3300029957 | Ga0265324_10006652 | Ga0265324_100066524 | 469 |
| 105 | 3300045051 | Ga0451576_0182000 | Ga0451576_0182000_725_2146 | 469 |
| 106 | 3300028800 | Ga0265338_10006567 | Ga0265338_100065678 | 470 |
| 107 | 3300029957 | Ga0265324_10041082 | Ga0265324_100410821 | 470 |
| 108 | 3300046690 | Ga0495624_0047601 | Ga0495624_0047601_279_1712 | 470 |
| 109 | 3300005340 | Ga0070689_100096872 | Ga0070689_1000968722 | 471 |
| 110 | 3300005614 | Ga0068856_100018914 | Ga0068856_1000189144 | 471 |
| 111 | 3300009093 | Ga0105240_10095009 | Ga0105240_100950092 | 471 |
| 112 | 3300009551 | Ga0105238_10008351 | Ga0105238_100083513 | 471 |
| 113 | 3300025909 | Ga0207705_10154834 | Ga0207705_101548341 | 471 |
| 114 | 3300025913 | Ga0207695_10172968 | Ga0207695_101729681 | 471 |
| 115 | 3300025924 | Ga0207694_10016516 | Ga0207694_100165163 | 471 |
| 116 | 3300025924 | Ga0207694_10214955 | Ga0207694_102149551 | 471 |
| 117 | 3300028563 | Ga0265319_1000001 | Ga0265319_1000001249 | 471 |
| 118 | 3300028800 | Ga0265338_10016476 | Ga0265338_100164769 | 471 |
| 119 | 3300031240 | Ga0265320_10021977 | Ga0265320_100219772 | 471 |
| 120 | 3300044712 | Ga0453684_0018070 | Ga0453684_0018070_8045_9466 | 471 |
| 121 | 3300046462 | Ga0495651_0044517 | Ga0495651_0044517_1438_2859 | 471 |
| 122 | 3300046543 | Ga0495645_0114100 | Ga0495645_0114100_279_1709 | 471 |
| 123 | 3300005435 | Ga0070714_100001234 | Ga0070714_1000012346 | 472 |
| 124 | 3300009093 | Ga0105240_10060245 | Ga0105240_100602454 | 472 |
| 125 | 3300025929 | Ga0207664_10100893 | Ga0207664_101008932 | 472 |
| 126 | 3300028573 | Ga0265334_10003555 | Ga0265334_100035552 | 472 |
| 127 | 3300028800 | Ga0265338_10006002 | Ga0265338_1000600211 | 472 |
| 128 | 3300042876 | Ga0451577_0001593 | Ga0451577_0001593_11453_12877 | 472 |
| 129 | 3300044712 | Ga0453684_0018587 | Ga0453684_0018587_6825_8249 | 472 |
| 130 | 3300046461 | Ga0495641_0012423 | Ga0495641_0012423_373_1797 | 472 |
| 131 | 3300046473 | Ga0495582_0029976 | Ga0495582_0029976_118_1542 | 472 |
| 132 | 3300046475 | Ga0495639_0056836 | Ga0495639_0056836_134_1558 | 472 |
| 133 | 3300046526 | Ga0495666_0074063 | Ga0495666_0074063_45_1469 | 472 |
| 134 | 3300046533 | Ga0495640_0017252 | Ga0495640_0017252_2962_4386 | 472 |
| 135 | 3300046535 | Ga0495586_0008304 | Ga0495586_0008304_2427_3851 | 472 |
| 136 | 3300046543 | Ga0495645_0121344 | Ga0495645_0121344_323_1747 | 472 |
| 137 | 3300046642 | Ga0495634_0007791 | Ga0495634_0007791_2261_3685 | 472 |
| 138 | 3300046675 | Ga0495657_0081665 | Ga0495657_0081665_164_1588 | 472 |
| 139 | 3300046681 | Ga0495647_0008861 | Ga0495647_0008861_1046_2470 | 472 |
| 140 | 3300046689 | Ga0495613_0034829 | Ga0495613_0034829_1678_3102 | 472 |
| 141 | 3300049571 | Ga0501034_0169236 | Ga0501034_0169236_686_2107 | 472 |
| 142 | 3300049575 | Ga0501039_0050719 | Ga0501039_0050719_508_1929 | 472 |
| 143 | 3300005937 | Ga0081455_10146112 | Ga0081455_101461122 | 473 |
| 144 | 3300006847 | Ga0075431_100085268 | Ga0075431_1000852682 | 473 |
| 145 | 3300009094 | Ga0111539_10052923 | Ga0111539_100529236 | 473 |
| 146 | 3300026078 | Ga0207702_10063068 | Ga0207702_100630683 | 473 |
| 147 | 3300031242 | Ga0265329_10001970 | Ga0265329_100019708 | 473 |
| 148 | 3300031344 | Ga0265316_10097102 | Ga0265316_100971022 | 473 |
| 149 | 3300031711 | Ga0265314_10000079 | Ga0265314_10000079103 | 473 |
| 150 | 3300037418 | Ga0395900_0128493 | Ga0395900_0128493_169_1590 | 473 |
| 151 | 3300042876 | Ga0451577_0076361 | Ga0451577_0076361_262_1689 | 473 |
| 152 | 3300044712 | Ga0453684_0031086 | Ga0453684_0031086_4603_6030 | 473 |
| 153 | 3300045051 | Ga0451576_0125084 | Ga0451576_0125084_554_1996 | 473 |
| 154 | 3300049570 | Ga0501033_0093312 | Ga0501033_0093312_575_1996 | 473 |
| 155 | 3300049823 | Ga0501044_0109118 | Ga0501044_0109118_1041_2462 | 473 |
| 156 | 3300050508 | nmdc:mga09592_18328_c1 | nmdc:mga09592_18328_c1_2812_4233 | 473 |
| 157 | 3300050510 | nmdc:mga06r32_132156_c1 | nmdc:mga06r32_132156_c1_302_1750 | 473 |
| 158 | 3300005335 | Ga0070666_10016886 | Ga0070666_100168862 | 474 |
| 159 | 3300005340 | Ga0070689_100009225 | Ga0070689_1000092253 | 474 |
| 160 | 3300005345 | Ga0070692_10034664 | Ga0070692_100346641 | 474 |
| 161 | 3300005444 | Ga0070694_100004607 | Ga0070694_1000046074 | 474 |
| 162 | 3300005445 | Ga0070708_100110787 | Ga0070708_1001107873 | 474 |
| 163 | 3300005544 | Ga0070686_100061182 | Ga0070686_1000611823 | 474 |
| 164 | 3300005549 | Ga0070704_100006285 | Ga0070704_1000062858 | 474 |
| 165 | 3300005618 | Ga0068864_100081627 | Ga0068864_1000816272 | 474 |
| 166 | 3300006844 | Ga0075428_100083029 | Ga0075428_1000830293 | 474 |
| 167 | 3300006847 | Ga0075431_100017693 | Ga0075431_1000176936 | 474 |
| 168 | 3300009093 | Ga0105240_10018563 | Ga0105240_100185633 | 474 |
| 169 | 3300009094 | Ga0111539_10010528 | Ga0111539_100105284 | 474 |
| 170 | 3300009094 | Ga0111539_10377737 | Ga0111539_103777372 | 474 |
| 171 | 3300009177 | Ga0105248_10200729 | Ga0105248_102007293 | 474 |
| 172 | 3300009553 | Ga0105249_10113341 | Ga0105249_101133412 | 474 |
| 173 | 3300014325 | Ga0163163_10000027 | Ga0163163_10000027138 | 474 |
| 174 | 3300025922 | Ga0207646_10104467 | Ga0207646_101044672 | 474 |
| 175 | 3300025936 | Ga0207670_10008210 | Ga0207670_100082102 | 474 |
| 176 | 3300025936 | Ga0207670_10024612 | Ga0207670_100246123 | 474 |
| 177 | 3300025961 | Ga0207712_10022621 | Ga0207712_100226215 | 474 |
| 178 | 3300026095 | Ga0207676_10089614 | Ga0207676_100896142 | 474 |
| 179 | 3300027907 | Ga0207428_10056620 | Ga0207428_100566202 | 474 |
| 180 | 3300028556 | Ga0265337_1004515 | Ga0265337_10045155 | 474 |
| 181 | 3300028556 | Ga0265337_1023781 | Ga0265337_10237811 | 474 |
| 182 | 3300028573 | Ga0265334_10010313 | Ga0265334_100103132 | 474 |
| 183 | 3300028800 | Ga0265338_10002530 | Ga0265338_1000253011 | 474 |
| 184 | 3300028800 | Ga0265338_10002770 | Ga0265338_1000277025 | 474 |
| 185 | 3300028800 | Ga0265338_10015708 | Ga0265338_100157084 | 474 |
| 186 | 3300028800 | Ga0265338_10033888 | Ga0265338_100338882 | 474 |
| 187 | 3300028800 | Ga0265338_10056476 | Ga0265338_100564762 | 474 |
| 188 | 3300028800 | Ga0265338_10166587 | Ga0265338_101665871 | 474 |
| 189 | 3300031344 | Ga0265316_10003620 | Ga0265316_1000362015 | 474 |
| 190 | 3300031711 | Ga0265314_10005739 | Ga0265314_100057393 | 474 |
| 191 | 3300035118 | Ga0373954_0000157 | Ga0373954_0000157_12188_13621 | 474 |
| 192 | 3300035119 | Ga0373956_0012213 | Ga0373956_0012213_2076_3509 | 474 |
| 193 | 3300036401 | Ga0373937_0018629 | Ga0373937_0018629_3405_4838 | 474 |
| 194 | 3300046454 | Ga0495592_0000008 | Ga0495592_0000008_155122_156558 | 474 |
| 195 | 3300046459 | Ga0495629_0019403 | Ga0495629_0019403_3330_4763 | 474 |
| 196 | 3300046475 | Ga0495639_0025457 | Ga0495639_0025457_784_2214 | 474 |
| 197 | 3300046477 | Ga0495664_0004421 | Ga0495664_0004421_2336_3772 | 474 |
| 198 | 3300046514 | Ga0495618_0001265 | Ga0495618_0001265_15313_16746 | 474 |
| 199 | 3300046514 | Ga0495618_0007461 | Ga0495618_0007461_4171_5607 | 474 |
| 200 | 3300046516 | Ga0495628_0000046 | Ga0495628_0000046_66718_68154 | 474 |
| 201 | 3300046517 | Ga0495630_0000031 | Ga0495630_0000031_114834_116264 | 474 |
| 202 | 3300046526 | Ga0495666_0008249 | Ga0495666_0008249_1340_2770 | 474 |
| 203 | 3300046529 | Ga0495652_0067474 | Ga0495652_0067474_1161_2597 | 474 |
| 204 | 3300046533 | Ga0495640_0010170 | Ga0495640_0010170_2431_3861 | 474 |
| 205 | 3300046533 | Ga0495640_0028464 | Ga0495640_0028464_117_1553 | 474 |
| 206 | 3300046535 | Ga0495586_0000016 | Ga0495586_0000016_18821_20251 | 474 |
| 207 | 3300046535 | Ga0495586_0000121 | Ga0495586_0000121_19202_20635 | 474 |
| 208 | 3300046535 | Ga0495586_0001531 | Ga0495586_0001531_10067_11503 | 474 |
| 209 | 3300046559 | Ga0495667_0053668 | Ga0495667_0053668_459_1892 | 474 |
| 210 | 3300046642 | Ga0495634_0000333 | Ga0495634_0000333_19172_20605 | 474 |
| 211 | 3300046683 | Ga0495658_0008697 | Ga0495658_0008697_2580_4007 | 474 |
| 212 | 3300046683 | Ga0495658_0087725 | Ga0495658_0087725_337_1767 | 474 |
| 213 | 3300046689 | Ga0495613_0000939 | Ga0495613_0000939_13582_15015 | 474 |
| 214 | 3300047319 | Ga0495674_0004035 | Ga0495674_0004035_8033_9463 | 474 |
| 215 | 3300047321 | Ga0495676_0003921 | Ga0495676_0003921_5691_7121 | 474 |
| 216 | 3300047322 | Ga0495680_0002012 | Ga0495680_0002012_17834_19267 | 474 |
| 217 | 3300050510 | nmdc:mga06r32_15291_c1 | nmdc:mga06r32_15291_c1_2137_3567 | 474 |
| 218 | 3300050511 | nmdc:mga08y16_1393_c1 | nmdc:mga08y16_1393_c1_7296_8729 | 474 |
| 219 | 3300050511 | nmdc:mga08y16_54902_c1 | nmdc:mga08y16_54902_c1_1138_2568 | 474 |
| 220 | 3300050515 | nmdc:mga0a205_183567_c1 | nmdc:mga0a205_183567_c1_150_1583 | 474 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1xhf-assembly1.cif.gz_A | crystal structure of the bef3-activated receiver domain of redox response regulator arca | 0.9679 | 4 | 123 |
| 1nxx-assembly1.cif.gz_A-2 | micarec ph 5.5 | 0.9666 | 7 | 123 |
| 4bs1-assembly1.cif.gz_B-1 | mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition | 0.966 | 147 | 316 |
| 1nxt-assembly1.cif.gz_A-2 | micarec ph 4.0 | 0.9635 | 7 | 123 |
| 2a9r-assembly1.cif.gz_A-2 | rr02-rec phosphate in the active site | 0.963 | 7 | 123 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5m7nA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9858 | 147 | 313 | 3.40.50.300 |
| af_P30843_1_80_3.40.50.2300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator | 0.974 | 7 | 85 | 3.40.50.2300 |
| 4d6yA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator | 0.971 | 8 | 122 | 3.40.50.2300 |
| 1xhfB00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator | 0.9648 | 4 | 123 | 3.40.50.2300 |
| 4nicD00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator | 0.9617 | 7 | 121 | 3.40.50.2300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7V7ZKX6-F1-model_v4 | Response regulator transcription factor | 0.9662 | 7 | 124 |
GO:0000156
GO:0000976 GO:0005829 GO:0006355 GO:0032993 |
| AF-A0A7W0F9C6-F1-model_v4 | Response regulator transcription factor | 0.9657 | 6 | 123 |
GO:0000156
GO:0000976 GO:0005829 GO:0006355 GO:0032993 |
| AF-A0A0P8DH58-F1-model_v4 | histidine kinase (EC 2.7.13.3) | 0.9645 | 6 | 122 |
GO:0000155
|
| AF-A0A6N6KX87-F1-model_v4 | Response regulator | 0.9642 | 6 | 122 |
GO:0000160
GO:0003677 |
| AF-A0A7G9YH64-F1-model_v4 | Sensor histidine kinase RcsC (EC 2.7.13.3) | 0.9639 | 5 | 123 |
GO:0000155
GO:0000156 GO:0000976 GO:0005829 GO:0006355 GO:0032993 |
Predicted Structure (AlphaFold2)
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