F332229
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 220 | 162 | 440 | 296 |
Family's Representative Sequence
| Representative Sequence | 3300013100|Ga0157373_10020991|Ga0157373_100209914 |
| Length | 324 |
| Sequence | VPPSRRPRRPRSATCGAQRRRDDSAQRPKVSDEFRSGHVAIVGRPSVGKSTLLNRLVGHRISITSRKPQTTRHRIVGVLTEPGRQFAFVDTPGFQTRHRSRLNDRLNRTVTTSLADVDVVVLVVDAARLTDADRAVSALIPPTLPAIAAVNKVDALAAPRELLPRLAELATWRDFAAIVPVSAEKGVAFDALKDEIARHLPLSPALYDADTLTDRDERFLAAELIREKIFRLLGEELPYATTVTIERFVEEGRLRRIAAVVLVDKAGQRAILLGKGGATMKTIATRAREDMEALFGGKVCLEVFVRVRRNWAATDASLARLGYE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 4 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 7 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 15 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 16 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 17 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 18 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 19 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 20 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 21 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 22 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 23 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 24 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 25 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 26 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 41 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 42 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 43 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 44 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 45 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 58 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 59 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 60 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 61 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 62 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 63 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 64 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 65 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 66 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 67 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 68 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 69 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 70 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 71 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 72 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 73 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 74 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 75 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 76 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 77 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 78 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 79 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 80 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 81 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 82 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 83 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 84 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 85 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 86 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 87 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 88 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 89 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 90 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 91 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 92 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 93 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 94 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 95 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 96 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 98 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 99 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 100 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 101 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 102 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 103 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 104 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 105 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 106 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 107 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 108 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 130 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 131 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 134 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 135 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 136 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 137 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 138 | 3300053149 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere | Metagenome | Endosphere |
| 139 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 140 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 141 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 143 | 2599185292 | Achromobacter sp. NFACC18-2 | Isolate | Rhizoplane |
| 144 | 2643221569 | Achromobacter sp. Root565 | Isolate | Unclassified |
| 145 | 2643221594 | Achromobacter sp. Root170 | Isolate | Unclassified |
| 146 | 2643221621 | Achromobacter sp. Root83 | Isolate | Unclassified |
| 147 | 2739367655 | Pusillimonas sp. YR330 | Isolate | Unclassified |
| 148 | 2808606395 | Achromobacter sp. SLBN-14 | Isolate | Unclassified |
| 149 | 2855730933 | Achromobacter sp. HZ28 | Isolate | Nodule |
| 150 | 2855767633 | Achromobacter sp. HZ34 | Isolate | Nodule |
| 151 | 2857537821 | Achromobacter sp. R-71975 | Isolate | Unclassified |
| 152 | 2857542790 | Achromobacter sp. R-72367 | Isolate | Unclassified |
| 153 | 2857576091 | Pigmentiphaga sp. R-72090 | Isolate | Unclassified |
| 154 | 2858950400 | Achromobacter sp. K91 | Isolate | Unclassified |
| 155 | 2881412998 | Achromobacter aloeverae AVA-1 | Isolate | Unclassified |
| 156 | 2881927736 | Candidimonas sp. SYP-B2681 | Isolate | Rhizosphere |
| 157 | 2887375801 | Parapusillimonas sp. SGNA-6 | Isolate | Rhizosphere |
| 158 | 2895511927 | Pseudoxanthomonas sp. SGD-5-1 | Isolate | Rhizosphere |
| 159 | 2941479691 | |||
| 160 | 8002392321 | Alcaligenes faecalis Mc250 | Isolate | Rhizosphere |
| 161 | 8048746797 | Alcaligenes endophyticus DSM 100498 | Isolate | Unclassified |
| 162 | 8055225921 | Achromobacter panacis KCTC 42751 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.45 |
| Metatranscriptomes | 0.45 |
| Isolates | 9.09 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.82 |
| Nodule | 0.91 |
| Rhizoplane | 0.91 |
| Rhizosphere | 72.27 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.36 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0157373_10020991 | 3300013100 | Bacteria | 4741 |
| 2 | JGI25151J46595_10000203 | 3300003187 | Bacteria | 73276 |
| 3 | Ga0055529_1001384 | 3300003763 | Bacteria | 7808 |
| 4 | Ga0065704_10128466 | 3300005289 | Bacteria | 1649 |
| 5 | Ga0070658_10037135 | 3300005327 | Bacteria | 3926 |
| 6 | Ga0070658_10221570 | 3300005327 | Bacteria | 1600 |
| 7 | Ga0070680_100173541 | 3300005336 | Bacteria | 1815 |
| 8 | Ga0070661_100009677 | 3300005344 | Bacteria | 6682 |
| 9 | Ga0070668_100014595 | 3300005347 | Bacteria | 5872 |
| 10 | Ga0070659_100073492 | 3300005366 | Bacteria | 2722 |
| 11 | Ga0070667_100032112 | 3300005367 | Bacteria | 4378 |
| 12 | Ga0070681_10001167 | 3300005458 | Bacteria | 22682 |
| 13 | Ga0070681_10041352 | 3300005458 | Bacteria | 4620 |
| 14 | Ga0070698_100101118 | 3300005471 | Bacteria | 2855 |
| 15 | Ga0070679_100033573 | 3300005530 | Bacteria | 5081 |
| 16 | Ga0070679_100228410 | 3300005530 | Bacteria | 1821 |
| 17 | Ga0068853_100035586 | 3300005539 | Bacteria | 4230 |
| 18 | Ga0068853_100052395 | 3300005539 | Bacteria | 3516 |
| 19 | Ga0068855_100003881 | 3300005563 | Bacteria | 18269 |
| 20 | Ga0068855_100070308 | 3300005563 | Bacteria | 4072 |
| 21 | Ga0068854_100062340 | 3300005578 | Bacteria | 2703 |
| 22 | Ga0068856_100082032 | 3300005614 | Bacteria | 3200 |
| 23 | Ga0068852_100011796 | 3300005616 | Bacteria | 6600 |
| 24 | Ga0075365_10020253 | 3300006038 | Bacteria | 4121 |
| 25 | Ga0075364_10000144 | 3300006051 | Bacteria | 31200 |
| 26 | Ga0075364_10006346 | 3300006051 | Bacteria | 6947 |
| 27 | Ga0075364_10032781 | 3300006051 | Bacteria | 3340 |
| 28 | Ga0075364_10061688 | 3300006051 | Bacteria | 2460 |
| 29 | Ga0075364_10306028 | 3300006051 | Bacteria | 1082 |
| 30 | Ga0075369_10012849 | 3300006186 | Bacteria | 3312 |
| 31 | Ga0075366_10015220 | 3300006195 | Bacteria | 4404 |
| 32 | Ga0075428_100002620 | 3300006844 | Bacteria | 19578 |
| 33 | Ga0075434_100072667 | 3300006871 | Bacteria | 3431 |
| 34 | Ga0068865_100290838 | 3300006881 | Bacteria | 1304 |
| 35 | Ga0097620_100387183 | 3300006931 | Bacteria | 1494 |
| 36 | Ga0111539_10003080 | 3300009094 | Bacteria | 22102 |
| 37 | Ga0114129_10147284 | 3300009147 | Bacteria | 3224 |
| 38 | Ga0105248_10481229 | 3300009177 | Bacteria | 1399 |
| 39 | Ga0105238_10002047 | 3300009551 | Bacteria | 20346 |
| 40 | Ga0105238_10008612 | 3300009551 | Bacteria | 10207 |
| 41 | Ga0157370_10186928 | 3300013104 | Bacteria | 1923 |
| 42 | Ga0157369_10002386 | 3300013105 | Bacteria | 22557 |
| 43 | Ga0157369_10003403 | 3300013105 | Bacteria | 18870 |
| 44 | Ga0157374_10088550 | 3300013296 | Bacteria | 2948 |
| 45 | Ga0163162_10057164 | 3300013306 | Bacteria | 3929 |
| 46 | Ga0157372_10027720 | 3300013307 | Bacteria | 6173 |
| 47 | Ga0157375_10249389 | 3300013308 | Bacteria | 1936 |
| 48 | Ga0157380_10022368 | 3300014326 | Bacteria | 4758 |
| 49 | Ga0157376_10059497 | 3300014969 | Bacteria | 3203 |
| 50 | Ga0163161_10027629 | 3300017792 | Bacteria | 4026 |
| 51 | Ga0209672_103754 | 3300025228 | Bacteria | 3023 |
| 52 | Ga0209455_1001021 | 3300025272 | Bacteria | 14015 |
| 53 | Ga0209676_1009631 | 3300025292 | Bacteria | 4141 |
| 54 | Ga0209025_1000003 | 3300025294 | Bacteria | 1366495 |
| 55 | Ga0209051_1051809 | 3300025303 | Bacteria | 1362 |
| 56 | Ga0207707_10037878 | 3300025912 | Bacteria | 4213 |
| 57 | Ga0207695_10056075 | 3300025913 | Bacteria | 4102 |
| 58 | Ga0207695_10326074 | 3300025913 | Bacteria | 1425 |
| 59 | Ga0207657_10091420 | 3300025919 | Bacteria | 2538 |
| 60 | Ga0207649_10171893 | 3300025920 | Bacteria | 1510 |
| 61 | Ga0207652_10147169 | 3300025921 | Bacteria | 2108 |
| 62 | Ga0207669_10060235 | 3300025937 | Bacteria | 2326 |
| 63 | Ga0207667_10030499 | 3300025949 | Bacteria | 5833 |
| 64 | Ga0207667_10160032 | 3300025949 | Bacteria | 2316 |
| 65 | Ga0207668_10011243 | 3300025972 | Bacteria | 5433 |
| 66 | Ga0207658_10029552 | 3300025986 | Bacteria | 3872 |
| 67 | Ga0207639_10098805 | 3300026041 | Bacteria | 2353 |
| 68 | Ga0207639_10141370 | 3300026041 | Bacteria | 2006 |
| 69 | Ga0207639_10179166 | 3300026041 | Bacteria | 1801 |
| 70 | Ga0207702_10081066 | 3300026078 | Bacteria | 2817 |
| 71 | Ga0207698_10016718 | 3300026142 | Bacteria | 4956 |
| 72 | Ga0207428_10006673 | 3300027907 | Bacteria | 10599 |
| 73 | Ga0265318_10023414 | 3300028577 | Bacteria | 2462 |
| 74 | Ga0307511_10000040 | 3300030521 | Bacteria | 102640 |
| 75 | Ga0265330_10001653 | 3300031235 | Bacteria | 12678 |
| 76 | Ga0265332_10005360 | 3300031238 | Bacteria | 5922 |
| 77 | Ga0265325_10031036 | 3300031241 | Bacteria | 2863 |
| 78 | Ga0265329_10001391 | 3300031242 | Bacteria | 11706 |
| 79 | Ga0265339_10050414 | 3300031249 | Bacteria | 2277 |
| 80 | Ga0265331_10000350 | 3300031250 | Bacteria | 48905 |
| 81 | Ga0265327_10008574 | 3300031251 | Bacteria | 7584 |
| 82 | Ga0265327_10024690 | 3300031251 | Bacteria | 3522 |
| 83 | Ga0265327_10074339 | 3300031251 | Bacteria | 1693 |
| 84 | Ga0316579_10058007 | 3300031691 | Bacteria | 1819 |
| 85 | Ga0265314_10012867 | 3300031711 | Bacteria | 6799 |
| 86 | Ga0316576_10002005 | 3300031727 | Bacteria | 11400 |
| 87 | Ga0316576_10257535 | 3300031727 | Bacteria | 1309 |
| 88 | Ga0316578_10001361 | 3300031728 | Bacteria | 9848 |
| 89 | Ga0316577_10030000 | 3300031733 | Unclassified | 3035 |
| 90 | Ga0307413_10081427 | 3300031824 | Bacteria | 2076 |
| 91 | Ga0307413_10161182 | 3300031824 | Bacteria | 1576 |
| 92 | Ga0307410_10154491 | 3300031852 | Bacteria | 1712 |
| 93 | Ga0307412_10000845 | 3300031911 | Bacteria | 17634 |
| 94 | Ga0307416_100239339 | 3300032002 | Bacteria | 1757 |
| 95 | Ga0307414_10051608 | 3300032004 | Bacteria | 2856 |
| 96 | Ga0307411_10126121 | 3300032005 | Bacteria | 1862 |
| 97 | Ga0307415_100073331 | 3300032126 | Bacteria | 2415 |
| 98 | Ga0316585_10001543 | 3300032137 | Bacteria | 6106 |
| 99 | Ga0316580_10013743 | 3300032139 | Bacteria | 2467 |
| 100 | Ga0307507_10058694 | 3300033179 | Bacteria | 3609 |
| 101 | Ga0316596_1038634 | 3300033541 | Bacteria | 1251 |
| 102 | Ga0316574_0023482 | 3300035398 | Bacteria | 3681 |
| 103 | Ga0316574_0039617 | 3300035398 | Bacteria | 2898 |
| 104 | Ga0373924_0004887 | 3300035410 | Bacteria | 4710 |
| 105 | Ga0316584_0002114 | 3300036712 | Bacteria | 12430 |
| 106 | Ga0316584_0036293 | 3300036712 | Bacteria | 3657 |
| 107 | Ga0395899_0223278 | 3300037312 | Bacteria | 1304 |
| 108 | Ga0395900_0020660 | 3300037418 | Bacteria | 6729 |
| 109 | Ga0395900_0021232 | 3300037418 | Bacteria | 6639 |
| 110 | Ga0395900_0098611 | 3300037418 | Bacteria | 3002 |
| 111 | Ga0395898_0084282 | 3300037466 | Bacteria | 3064 |
| 112 | Ga0395905_0013444 | 3300037471 | Bacteria | 7844 |
| 113 | Ga0316581_0054380 | 3300037588 | Bacteria | 1227 |
| 114 | Ga0451577_0207198 | 3300042876 | Bacteria | 1771 |
| 115 | Ga0451577_0396043 | 3300042876 | Bacteria | 1253 |
| 116 | Ga0453683_0186686 | 3300044673 | Bacteria | 1315 |
| 117 | Ga0453683_0200757 | 3300044673 | Bacteria | 1266 |
| 118 | Ga0453684_0090686 | 3300044712 | Bacteria | 3776 |
| 119 | Ga0466970_0090362 | 3300044765 | Bacteria | 1662 |
| 120 | Ga0451576_0160354 | 3300045051 | Unclassified | 2347 |
| 121 | Ga0451576_0247091 | 3300045051 | Bacteria | 1865 |
| 122 | Ga0495607_0003102 | 3300046501 | Bacteria | 12897 |
| 123 | Ga0496101_0295377 | 3300048904 | Bacteria | 1268 |
| 124 | Ga0496116_0008422 | 3300048919 | Bacteria | 8951 |
| 125 | Ga0496117_0046984 | 3300048920 | Bacteria | 3100 |
| 126 | Ga0496119_0006130 | 3300048922 | Bacteria | 11252 |
| 127 | Ga0496120_0009984 | 3300048923 | Bacteria | 6669 |
| 128 | Ga0496121_0000306 | 3300048924 | Bacteria | 102245 |
| 129 | Ga0496121_0025395 | 3300048924 | Bacteria | 5622 |
| 130 | Ga0496121_0063664 | 3300048924 | Bacteria | 3011 |
| 131 | Ga0496122_0000644 | 3300048925 | Bacteria | 70937 |
| 132 | Ga0496122_0076744 | 3300048925 | Bacteria | 2350 |
| 133 | Ga0496123_0000203 | 3300048926 | Bacteria | 121361 |
| 134 | Ga0496123_0080358 | 3300048926 | Bacteria | 1987 |
| 135 | Ga0496124_0000046 | 3300048927 | Bacteria | 287043 |
| 136 | Ga0496124_0021656 | 3300048927 | Bacteria | 5920 |
| 137 | Ga0496124_0064549 | 3300048927 | Bacteria | 3055 |
| 138 | Ga0496125_0000011 | 3300048928 | Bacteria | 655895 |
| 139 | Ga0496126_0011662 | 3300048929 | Bacteria | 9068 |
| 140 | Ga0496126_0110122 | 3300048929 | Bacteria | 2399 |
| 141 | Ga0501031_0025619 | 3300049568 | Bacteria | 3846 |
| 142 | Ga0501031_0048495 | 3300049568 | Bacteria | 2767 |
| 143 | Ga0501031_0322884 | 3300049568 | Bacteria | 1000 |
| 144 | Ga0501033_0000491 | 3300049570 | Bacteria | 37247 |
| 145 | Ga0501033_0108402 | 3300049570 | Bacteria | 2023 |
| 146 | Ga0501034_0021204 | 3300049571 | Bacteria | 6626 |
| 147 | Ga0501034_0090620 | 3300049571 | Bacteria | 3055 |
| 148 | Ga0501034_0197693 | 3300049571 | Bacteria | 1970 |
| 149 | Ga0501034_0301902 | 3300049571 | Bacteria | 1538 |
| 150 | Ga0501034_0349725 | 3300049571 | Bacteria | 1407 |
| 151 | Ga0501036_0000389 | 3300049572 | Bacteria | 30927 |
| 152 | Ga0501037_0033701 | 3300049573 | Bacteria | 3782 |
| 153 | Ga0501037_0204967 | 3300049573 | Bacteria | 1392 |
| 154 | Ga0501038_0075029 | 3300049574 | Bacteria | 2859 |
| 155 | Ga0501038_0117539 | 3300049574 | Bacteria | 2196 |
| 156 | Ga0501039_0323852 | 3300049575 | Bacteria | 1211 |
| 157 | Ga0501043_0005030 | 3300049579 | Bacteria | 10700 |
| 158 | Ga0501043_0078574 | 3300049579 | Bacteria | 2593 |
| 159 | Ga0501043_0171572 | 3300049579 | Bacteria | 1692 |
| 160 | Ga0501046_0002040 | 3300049580 | Bacteria | 19198 |
| 161 | Ga0501047_0041221 | 3300049581 | Bacteria | 4461 |
| 162 | Ga0501047_0134853 | 3300049581 | Bacteria | 2349 |
| 163 | Ga0501067_0060716 | 3300049583 | Bacteria | 2092 |
| 164 | Ga0501068_0058350 | 3300049584 | Bacteria | 2342 |
| 165 | Ga0501070_0007253 | 3300049586 | Bacteria | 9411 |
| 166 | Ga0501070_0415743 | 3300049586 | Bacteria | 1086 |
| 167 | Ga0501071_0001985 | 3300049587 | Bacteria | 12236 |
| 168 | Ga0501072_0003633 | 3300049588 | Bacteria | 11606 |
| 169 | Ga0501072_0012223 | 3300049588 | Bacteria | 6561 |
| 170 | Ga0501073_0025326 | 3300049589 | Bacteria | 4256 |
| 171 | Ga0501074_0046282 | 3300049590 | Bacteria | 3146 |
| 172 | Ga0501074_0085090 | 3300049590 | Bacteria | 2266 |
| 173 | Ga0501080_0001393 | 3300049742 | Bacteria | 20224 |
| 174 | Ga0501080_0001862 | 3300049742 | Bacteria | 18118 |
| 175 | Ga0501083_0123052 | 3300049744 | Bacteria | 1701 |
| 176 | Ga0501035_0002186 | 3300049822 | Bacteria | 19407 |
| 177 | Ga0501035_0009130 | 3300049822 | Bacteria | 9219 |
| 178 | Ga0501035_0203557 | 3300049822 | Bacteria | 1696 |
| 179 | Ga0501044_0001421 | 3300049823 | Bacteria | 28085 |
| 180 | Ga0501044_0002640 | 3300049823 | Bacteria | 20395 |
| 181 | Ga0501044_0056228 | 3300049823 | Bacteria | 4039 |
| 182 | Ga0501044_0114693 | 3300049823 | Bacteria | 2700 |
| 183 | Ga0501044_0242520 | 3300049823 | Bacteria | 1745 |
| 184 | nmdc:mga00v17_112459_c1 | 3300050491 | Bacteria | 1728 |
| 185 | nmdc:mga00v17_1703_c1 | 3300050491 | Bacteria | 11450 |
| 186 | nmdc:mga00v17_174763_c1 | 3300050491 | Bacteria | 1385 |
| 187 | nmdc:mga00v17_49737_c1 | 3300050491 | Bacteria | 2544 |
| 188 | nmdc:mga0k408_7108_c1 | 3300050493 | Bacteria | 5981 |
| 189 | nmdc:mga05p37_232161_c1 | 3300050507 | Bacteria | 2222 |
| 190 | nmdc:mga08y16_5671_c1 | 3300050511 | Bacteria | 13081 |
| 191 | nmdc:mga0n895_290953_c1 | 3300050512 | Unclassified | 1656 |
| 192 | nmdc:mga0rr50_62039_c1 | 3300050513 | Bacteria | 2818 |
| 193 | nmdc:mga0sz30_55790_c1 | 3300050516 | Bacteria | 1682 |
| 194 | Ga0500583_0007043 | 3300053092 | Bacteria | 3922 |
| 195 | Ga0500568_0010707 | 3300053139 | Bacteria | 4284 |
| 196 | Ga0500600_0003179 | 3300053149 | Bacteria | 9416 |
| 197 | Ga0500604_0002190 | 3300053151 | Bacteria | 5378 |
| 198 | Ga0500634_0004024 | 3300053161 | Bacteria | 6699 |
| 199 | Ga0501082_0187602 | 3300060353 | Bacteria | 1799 |
| 200 | Ga0530510_0420008 | 3300061734 | Bacteria | 1009 |
| 201 | 2599903241 | 2599185292 | Bacteria | 6290804 |
| 202 | 2643862267 | 2643221569 | Bacteria | 6064337 |
| 203 | 2643980707 | 2643221594 | Bacteria | 5811388 |
| 204 | 2644122131 | 2643221621 | Bacteria | 6212786 |
| 205 | 2739612204 | 2739367655 | Bacteria | 4051151 |
| 206 | 2809031976 | 2808606395 | Bacteria | 6020352 |
| 207 | 2855734585 | 2855730933 | Bacteria | 7047938 |
| 208 | 2855770175 | 2855767633 | Bacteria | 7049357 |
| 209 | 2857538459 | 2857537821 | Bacteria | 5248181 |
| 210 | 2857546638 | 2857542790 | Bacteria | 5326616 |
| 211 | 2857579530 | 2857576091 | Bacteria | 5465855 |
| 212 | 2858955727 | 2858950400 | Bacteria | 6783797 |
| 213 | 2881414396 | 2881412998 | Bacteria | 6492157 |
| 214 | 2881930303 | 2881927736 | Bacteria | 3993927 |
| 215 | 2887377902 | 2887375801 | Bacteria | 5334027 |
| 216 | 2895515818 | 2895511927 | Bacteria | 6802080 |
| 217 | 2941481942 | |||
| 218 | 8002394996 | 8002392321 | Bacteria | 4159911 |
| 219 | 8048749779 | 8048746797 | Bacteria | 3557226 |
| 220 | 8055227934 | 8055225921 | Bacteria | 3341787 |
| 221 | Ga0157373_10020991 | |||
| 222 | JGI25151J46595_10000203 | |||
| 223 | Ga0055529_1001384 | |||
| 224 | Ga0065704_10128466 | |||
| 225 | Ga0070658_10037135 | |||
| 226 | Ga0070658_10221570 | |||
| 227 | Ga0070680_100173541 | |||
| 228 | Ga0070661_100009677 | |||
| 229 | Ga0070668_100014595 | |||
| 230 | Ga0070659_100073492 | |||
| 231 | Ga0070667_100032112 | |||
| 232 | Ga0070681_10001167 | |||
| 233 | Ga0070681_10041352 | |||
| 234 | Ga0070698_100101118 | |||
| 235 | Ga0070679_100033573 | |||
| 236 | Ga0070679_100228410 | |||
| 237 | Ga0068853_100035586 | |||
| 238 | Ga0068853_100052395 | |||
| 239 | Ga0068855_100003881 | |||
| 240 | Ga0068855_100070308 | |||
| 241 | Ga0068854_100062340 | |||
| 242 | Ga0068856_100082032 | |||
| 243 | Ga0068852_100011796 | |||
| 244 | Ga0075365_10020253 | |||
| 245 | Ga0075364_10000144 | |||
| 246 | Ga0075364_10006346 | |||
| 247 | Ga0075364_10032781 | |||
| 248 | Ga0075364_10061688 | |||
| 249 | Ga0075364_10306028 | |||
| 250 | Ga0075369_10012849 | |||
| 251 | Ga0075366_10015220 | |||
| 252 | Ga0075428_100002620 | |||
| 253 | Ga0075434_100072667 | |||
| 254 | Ga0068865_100290838 | |||
| 255 | Ga0097620_100387183 | |||
| 256 | Ga0111539_10003080 | |||
| 257 | Ga0114129_10147284 | |||
| 258 | Ga0105248_10481229 | |||
| 259 | Ga0105238_10002047 | |||
| 260 | Ga0105238_10008612 | |||
| 261 | Ga0157370_10186928 | |||
| 262 | Ga0157369_10002386 | |||
| 263 | Ga0157369_10003403 | |||
| 264 | Ga0157374_10088550 | |||
| 265 | Ga0163162_10057164 | |||
| 266 | Ga0157372_10027720 | |||
| 267 | Ga0157375_10249389 | |||
| 268 | Ga0157380_10022368 | |||
| 269 | Ga0157376_10059497 | |||
| 270 | Ga0163161_10027629 | |||
| 271 | Ga0209672_103754 | |||
| 272 | Ga0209455_1001021 | |||
| 273 | Ga0209676_1009631 | |||
| 274 | Ga0209025_1000003 | |||
| 275 | Ga0209051_1051809 | |||
| 276 | Ga0207707_10037878 | |||
| 277 | Ga0207695_10056075 | |||
| 278 | Ga0207695_10326074 | |||
| 279 | Ga0207657_10091420 | |||
| 280 | Ga0207649_10171893 | |||
| 281 | Ga0207652_10147169 | |||
| 282 | Ga0207669_10060235 | |||
| 283 | Ga0207667_10030499 | |||
| 284 | Ga0207667_10160032 | |||
| 285 | Ga0207668_10011243 | |||
| 286 | Ga0207658_10029552 | |||
| 287 | Ga0207639_10098805 | |||
| 288 | Ga0207639_10141370 | |||
| 289 | Ga0207639_10179166 | |||
| 290 | Ga0207702_10081066 | |||
| 291 | Ga0207698_10016718 | |||
| 292 | Ga0207428_10006673 | |||
| 293 | Ga0265318_10023414 | |||
| 294 | Ga0307511_10000040 | |||
| 295 | Ga0265330_10001653 | |||
| 296 | Ga0265332_10005360 | |||
| 297 | Ga0265325_10031036 | |||
| 298 | Ga0265329_10001391 | |||
| 299 | Ga0265339_10050414 | |||
| 300 | Ga0265331_10000350 | |||
| 301 | Ga0265327_10008574 | |||
| 302 | Ga0265327_10024690 | |||
| 303 | Ga0265327_10074339 | |||
| 304 | Ga0316579_10058007 | |||
| 305 | Ga0265314_10012867 | |||
| 306 | Ga0316576_10002005 | |||
| 307 | Ga0316576_10257535 | |||
| 308 | Ga0316578_10001361 | |||
| 309 | Ga0316577_10030000 | |||
| 310 | Ga0307413_10081427 | |||
| 311 | Ga0307413_10161182 | |||
| 312 | Ga0307410_10154491 | |||
| 313 | Ga0307412_10000845 | |||
| 314 | Ga0307416_100239339 | |||
| 315 | Ga0307414_10051608 | |||
| 316 | Ga0307411_10126121 | |||
| 317 | Ga0307415_100073331 | |||
| 318 | Ga0316585_10001543 | |||
| 319 | Ga0316580_10013743 | |||
| 320 | Ga0307507_10058694 | |||
| 321 | Ga0316596_1038634 | |||
| 322 | Ga0316574_0023482 | |||
| 323 | Ga0316574_0039617 | |||
| 324 | Ga0373924_0004887 | |||
| 325 | Ga0316584_0002114 | |||
| 326 | Ga0316584_0036293 | |||
| 327 | Ga0395899_0223278 | |||
| 328 | Ga0395900_0020660 | |||
| 329 | Ga0395900_0021232 | |||
| 330 | Ga0395900_0098611 | |||
| 331 | Ga0395898_0084282 | |||
| 332 | Ga0395905_0013444 | |||
| 333 | Ga0316581_0054380 | |||
| 334 | Ga0451577_0207198 | |||
| 335 | Ga0451577_0396043 | |||
| 336 | Ga0453683_0186686 | |||
| 337 | Ga0453683_0200757 | |||
| 338 | Ga0453684_0090686 | |||
| 339 | Ga0466970_0090362 | |||
| 340 | Ga0451576_0160354 | |||
| 341 | Ga0451576_0247091 | |||
| 342 | Ga0495607_0003102 | |||
| 343 | Ga0496101_0295377 | |||
| 344 | Ga0496116_0008422 | |||
| 345 | Ga0496117_0046984 | |||
| 346 | Ga0496119_0006130 | |||
| 347 | Ga0496120_0009984 | |||
| 348 | Ga0496121_0000306 | |||
| 349 | Ga0496121_0025395 | |||
| 350 | Ga0496121_0063664 | |||
| 351 | Ga0496122_0000644 | |||
| 352 | Ga0496122_0076744 | |||
| 353 | Ga0496123_0000203 | |||
| 354 | Ga0496123_0080358 | |||
| 355 | Ga0496124_0000046 | |||
| 356 | Ga0496124_0021656 | |||
| 357 | Ga0496124_0064549 | |||
| 358 | Ga0496125_0000011 | |||
| 359 | Ga0496126_0011662 | |||
| 360 | Ga0496126_0110122 | |||
| 361 | Ga0501031_0025619 | |||
| 362 | Ga0501031_0048495 | |||
| 363 | Ga0501031_0322884 | |||
| 364 | Ga0501033_0000491 | |||
| 365 | Ga0501033_0108402 | |||
| 366 | Ga0501034_0021204 | |||
| 367 | Ga0501034_0090620 | |||
| 368 | Ga0501034_0197693 | |||
| 369 | Ga0501034_0301902 | |||
| 370 | Ga0501034_0349725 | |||
| 371 | Ga0501036_0000389 | |||
| 372 | Ga0501037_0033701 | |||
| 373 | Ga0501037_0204967 | |||
| 374 | Ga0501038_0075029 | |||
| 375 | Ga0501038_0117539 | |||
| 376 | Ga0501039_0323852 | |||
| 377 | Ga0501043_0005030 | |||
| 378 | Ga0501043_0078574 | |||
| 379 | Ga0501043_0171572 | |||
| 380 | Ga0501046_0002040 | |||
| 381 | Ga0501047_0041221 | |||
| 382 | Ga0501047_0134853 | |||
| 383 | Ga0501067_0060716 | |||
| 384 | Ga0501068_0058350 | |||
| 385 | Ga0501070_0007253 | |||
| 386 | Ga0501070_0415743 | |||
| 387 | Ga0501071_0001985 | |||
| 388 | Ga0501072_0003633 | |||
| 389 | Ga0501072_0012223 | |||
| 390 | Ga0501073_0025326 | |||
| 391 | Ga0501074_0046282 | |||
| 392 | Ga0501074_0085090 | |||
| 393 | Ga0501080_0001393 | |||
| 394 | Ga0501080_0001862 | |||
| 395 | Ga0501083_0123052 | |||
| 396 | Ga0501035_0002186 | |||
| 397 | Ga0501035_0009130 | |||
| 398 | Ga0501035_0203557 | |||
| 399 | Ga0501044_0001421 | |||
| 400 | Ga0501044_0002640 | |||
| 401 | Ga0501044_0056228 | |||
| 402 | Ga0501044_0114693 | |||
| 403 | Ga0501044_0242520 | |||
| 404 | nmdc:mga00v17_112459_c1 | |||
| 405 | nmdc:mga00v17_1703_c1 | |||
| 406 | nmdc:mga00v17_174763_c1 | |||
| 407 | nmdc:mga00v17_49737_c1 | |||
| 408 | nmdc:mga0k408_7108_c1 | |||
| 409 | nmdc:mga05p37_232161_c1 | |||
| 410 | nmdc:mga08y16_5671_c1 | |||
| 411 | nmdc:mga0n895_290953_c1 | |||
| 412 | nmdc:mga0rr50_62039_c1 | |||
| 413 | nmdc:mga0sz30_55790_c1 | |||
| 414 | Ga0500583_0007043 | |||
| 415 | Ga0500568_0010707 | |||
| 416 | Ga0500600_0003179 | |||
| 417 | Ga0500604_0002190 | |||
| 418 | Ga0500634_0004024 | |||
| 419 | Ga0501082_0187602 | |||
| 420 | Ga0530510_0420008 | |||
| 421 | 2599903241 | |||
| 422 | 2643862267 | |||
| 423 | 2643980707 | |||
| 424 | 2644122131 | |||
| 425 | 2739612204 | |||
| 426 | 2809031976 | |||
| 427 | 2855734585 | |||
| 428 | 2855770175 | |||
| 429 | 2857538459 | |||
| 430 | 2857546638 | |||
| 431 | 2857579530 | |||
| 432 | 2858955727 | |||
| 433 | 2881414396 | |||
| 434 | 2881930303 | |||
| 435 | 2887377902 | |||
| 436 | 2895515818 | |||
| 437 | 2941481942 | |||
| 438 | 8002394996 | |||
| 439 | 8048749779 | |||
| 440 | 8055227934 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7c1o-assembly1.cif.gz_A | crystal structure of aquifex aeolicus era y63a bound to gdp.alf4- | 0.9137 | 6 | 295 |
| 3r9w-assembly1.cif.gz_A | crystal structure of era in complex with mggdpnp and nucleotides 1506-1542 of 16s ribosomal rna | 0.9117 | 6 | 295 |
| 7c1o-assembly1.cif.gz_A | crystal structure of aquifex aeolicus era y63a bound to gdp.alf4- | 0.8932 | 6 | 295 |
| 3r9w-assembly1.cif.gz_A | crystal structure of era in complex with mggdpnp and nucleotides 1506-1542 of 16s ribosomal rna | 0.8913 | 6 | 295 |
| 1wf3-assembly1.cif.gz_A | crystal structure of gtp-binding protein tt1341 from thermus thermophilus hb8 | 0.8766 | 5 | 296 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2FY06_184_297_3.30.300.20 | Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain | 0.9335 | 186 | 296 | 3.30.300.20 |
| af_P9WNK9_2_186_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9323 | 5 | 184 | 3.40.50.300 |
| af_B9FI63_305_419_3.30.300.20 | Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain | 0.9273 | 186 | 295 | 3.30.300.20 |
| af_Q9VG07_272_372_3.30.300.20 | Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain | 0.9226 | 186 | 282 | 3.30.300.20 |
| af_Q2FY06_2_183_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9214 | 5 | 184 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2N2T3B4-F1-model_v4 | GTPase Era | 0.9705 | 4 | 203 |
GO:0000028
GO:0005525 GO:0005829 GO:0019843 GO:0043024 |
| AF-A0A2M7MUF1-F1-model_v4 | GTPase Era | 0.9682 | 1 | 296 |
GO:0000028
GO:0003924 GO:0005525 GO:0005829 GO:0005886 GO:0043024 GO:0070181 |
| AF-A0A388S9E6-F1-model_v4 | GTPase Era | 0.9679 | 4 | 296 |
GO:0000028
GO:0003924 GO:0005525 GO:0005829 GO:0005886 GO:0043024 GO:0070181 |
| AF-A0A2M7MUF1-F1-model_v4 | GTPase Era | 0.965 | 1 | 296 |
GO:0000028
GO:0003924 GO:0005525 GO:0005829 GO:0005886 GO:0043024 GO:0070181 |
| AF-Q7WD33-F1-model_v4 | GTPase Era | 0.9612 | 1 | 296 |
GO:0000028
GO:0003924 GO:0005525 GO:0005829 GO:0005886 GO:0043024 GO:0070181 |