F331874

General Info

Members Datasets Scaffolds Average Seq Length
220 79 440 359

Family's Representative Sequence

Representative Sequence 3300005340|Ga0070689_100083383|Ga0070689_1000833832
Length 398
Sequence LRLCVKNCGRKIQLLHLRRISSLRPIERQSWMKTYDIALIGGDGTGPEVAAEAVKVSEAAEKKFGIKINWHKYDFGGERYLKTGEVLPDSAVGELRKFKAIFLGAVGHPQVKPGILEKGILLRLRFELEQYINLRPVKLYRAQDCPLKDKGPEHVDFVVVRENNEGLYAGAGGNLFKGTPNEVAVQESINTRRGVDRCLKYAFELAKRQRGGKPWKGLKSEDTGAGKNAQLTLCGKTNVLTYAFDLWWRGFQEMAPAYPTVKTDYAHVDAICMWFVKNPEWFDVIVTDNMFGDIITDLAAMIQGGLGVAAGGNINPEGTSMFEPMGGSAPKYTGQNVINPIAAINAAALMLDSLGETKAAAAIESSVVKIINTKIQSLAAGKMGYGTREVGDLIAAAI

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
10 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
11 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
12 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
13 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
14 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
15 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
16 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
17 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
18 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
19 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
25 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
26 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
27 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
28 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
29 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
30 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
31 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
32 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
33 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
34 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
35 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
36 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
37 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
38 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
39 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
40 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
43 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
44 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
45 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
46 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
49 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
50 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
51 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
52 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
56 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
57 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
58 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
59 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
60 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
61 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
62 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
63 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
64 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
68 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
69 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
70 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
71 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
72 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
73 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
76 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
79 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.73
Metatranscriptomes 2.27
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.91
Rhizosphere 97.27
Stem 0
Stem Tuber 0
Unclassified 0.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100083383 3300005340 Bacteria 2512
2 Ga0070658_10074980 3300005327 Bacteria 2775
3 Ga0070666_10285155 3300005335 Bacteria 1174
4 Ga0070688_100149713 3300005365 Bacteria 1594
5 Ga0070714_100007332 3300005435 Bacteria 8575
6 Ga0070708_100053019 3300005445 Bacteria 3598
7 Ga0070707_100323069 3300005468 Bacteria 1500
8 Ga0068853_100101333 3300005539 Bacteria 2546
9 Ga0070695_100061518 3300005545 Bacteria 2436
10 Ga0068863_100051802 3300005841 Bacteria 3890
11 Ga0075431_100036398 3300006847 Bacteria 5069
12 Ga0075433_10015697 3300006852 Bacteria 6221
13 Ga0105240_10017324 3300009093 Bacteria 9712
14 Ga0114129_10048431 3300009147 Bacteria 5972
15 Ga0105242_10118825 3300009176 Bacteria 2265
16 Ga0105238_10122442 3300009551 Bacteria 2580
17 Ga0105249_10245310 3300009553 Bacteria 1773
18 Ga0157370_10045976 3300013104 Bacteria 4186
19 Ga0207652_10184407 3300025921 Bacteria 1876
20 Ga0207694_10081993 3300025924 Bacteria 2534
21 Ga0207664_10010687 3300025929 Bacteria 6492
22 Ga0207661_10203884 3300025944 Bacteria 1740
23 Ga0207641_10038564 3300026088 Bacteria 3995
24 Ga0207641_10518742 3300026088 Bacteria 1159
25 Ga0265337_1000266 3300028556 Bacteria 28423
26 Ga0265337_1005974 3300028556 Bacteria 4754
27 Ga0265319_1006613 3300028563 Bacteria 5346
28 Ga0265319_1014023 3300028563 Bacteria 3161
29 Ga0265334_10013000 3300028573 Bacteria 3491
30 Ga0265323_10000011 3300028653 Bacteria 109381
31 Ga0265323_10000640 3300028653 Bacteria 19075
32 Ga0265323_10001993 3300028653 Bacteria 9628
33 Ga0265323_10005843 3300028653 Bacteria 5204
34 Ga0265323_10006522 3300028653 Bacteria 4904
35 Ga0265323_10015978 3300028653 Bacteria 2939
36 Ga0265323_10026533 3300028653 Bacteria 2183
37 Ga0265323_10034995 3300028653 Bacteria 1853
38 Ga0265322_10000202 3300028654 Bacteria 26330
39 Ga0265322_10001895 3300028654 Bacteria 6622
40 Ga0265322_10011192 3300028654 Bacteria 2603
41 Ga0265336_10006070 3300028666 Bacteria 4390
42 Ga0265338_10000088 3300028800 Bacteria 174641
43 Ga0265338_10002335 3300028800 Bacteria 28668
44 Ga0265338_10002606 3300028800 Bacteria 26655
45 Ga0265338_10002750 3300028800 Bacteria 25793
46 Ga0265338_10003142 3300028800 Bacteria 23576
47 Ga0265338_10005724 3300028800 Bacteria 16073
48 Ga0265338_10008490 3300028800 Bacteria 12461
49 Ga0265338_10014697 3300028800 Bacteria 8674
50 Ga0265338_10023453 3300028800 Bacteria 6342
51 Ga0265338_10032361 3300028800 Bacteria 5102
52 Ga0265338_10039346 3300028800 Bacteria 4462
53 Ga0265338_10047735 3300028800 Bacteria 3906
54 Ga0265338_10049566 3300028800 Bacteria 3805
55 Ga0265338_10050880 3300028800 Bacteria 3739
56 Ga0265338_10065603 3300028800 Bacteria 3147
57 Ga0265324_10017034 3300029957 Bacteria 2645
58 Ga0265324_10045348 3300029957 Bacteria 1514
59 Ga0265330_10013707 3300031235 Bacteria 3772
60 Ga0265330_10038656 3300031235 Bacteria 2121
61 Ga0265332_10001495 3300031238 Bacteria 13010
62 Ga0265332_10004098 3300031238 Bacteria 6915
63 Ga0265332_10008555 3300031238 Bacteria 4599
64 Ga0265328_10028153 3300031239 Bacteria 2103
65 Ga0265320_10000590 3300031240 Bacteria 27907
66 Ga0265320_10006935 3300031240 Bacteria 7071
67 Ga0265320_10030338 3300031240 Bacteria 2789
68 Ga0265320_10038857 3300031240 Bacteria 2384
69 Ga0265329_10001327 3300031242 Bacteria 12021
70 Ga0265329_10001809 3300031242 Bacteria 10164
71 Ga0265329_10013342 3300031242 Bacteria 2932
72 Ga0265340_10000385 3300031247 Bacteria 23505
73 Ga0265340_10031508 3300031247 Bacteria 2651
74 Ga0265339_10053884 3300031249 Bacteria 2186
75 Ga0265339_10061016 3300031249 Bacteria 2030
76 Ga0265339_10145974 3300031249 Bacteria 1200
77 Ga0265331_10000209 3300031250 Bacteria 71099
78 Ga0265327_10004141 3300031251 Bacteria 13082
79 Ga0265316_10000278 3300031344 Bacteria 57605
80 Ga0265316_10000798 3300031344 Bacteria 34784
81 Ga0265316_10000909 3300031344 Bacteria 32283
82 Ga0265316_10002373 3300031344 Bacteria 19598
83 Ga0265316_10003395 3300031344 Bacteria 16123
84 Ga0265316_10008108 3300031344 Bacteria 9788
85 Ga0265316_10011056 3300031344 Bacteria 8178
86 Ga0265316_10013550 3300031344 Bacteria 7236
87 Ga0265316_10038000 3300031344 Bacteria 3882
88 Ga0265316_10049832 3300031344 Bacteria 3297
89 Ga0316575_10002785 3300031665 Bacteria 5917
90 Ga0316575_10007318 3300031665 Bacteria 3992
91 Ga0316575_10024495 3300031665 Bacteria 2337
92 Ga0316575_10025838 3300031665 Bacteria 2279
93 Ga0316579_10001245 3300031691 Bacteria 9159
94 Ga0316579_10002409 3300031691 Bacteria 7055
95 Ga0316579_10034789 3300031691 Bacteria 2319
96 Ga0316579_10039635 3300031691 Bacteria 2183
97 Ga0316579_10043960 3300031691 Bacteria 2079
98 Ga0316579_10044709 3300031691 Bacteria 2063
99 Ga0316579_10049772 3300031691 Bacteria 1959
100 Ga0265314_10000387 3300031711 Bacteria 59711
101 Ga0265314_10067190 3300031711 Bacteria 2416
102 Ga0265342_10000019 3300031712 Bacteria 177943
103 Ga0265342_10000415 3300031712 Bacteria 46757
104 Ga0265342_10001594 3300031712 Bacteria 20943
105 Ga0265342_10023221 3300031712 Bacteria 3929
106 Ga0265342_10056110 3300031712 Bacteria 2336
107 Ga0265342_10148071 3300031712 Bacteria 1306
108 Ga0316576_10002901 3300031727 Bacteria 9905
109 Ga0316576_10006997 3300031727 Bacteria 7058
110 Ga0316576_10019038 3300031727 Bacteria 4698
111 Ga0316576_10077608 3300031727 Bacteria 2460
112 Ga0316576_10149135 3300031727 Bacteria 1762
113 Ga0316576_10238047 3300031727 Bacteria 1368
114 Ga0316578_10004438 3300031728 Bacteria 6628
115 Ga0316578_10023009 3300031728 Bacteria 3483
116 Ga0316578_10031843 3300031728 Bacteria 3008
117 Ga0316578_10043127 3300031728 Bacteria 2619
118 Ga0316578_10044360 3300031728 Bacteria 2586
119 Ga0316578_10099742 3300031728 Bacteria 1740
120 Ga0316577_10000442 3300031733 Bacteria 16218
121 Ga0316577_10004431 3300031733 Bacteria 7245
122 Ga0316577_10015471 3300031733 Bacteria 4198
123 Ga0316577_10038996 3300031733 Bacteria 2658
124 Ga0316577_10039390 3300031733 Bacteria 2643
125 Ga0316583_10000756 3300032133 Bacteria 10123
126 Ga0316583_10004702 3300032133 Bacteria 4872
127 Ga0316583_10005838 3300032133 Bacteria 4426
128 Ga0316583_10008723 3300032133 Bacteria 3658
129 Ga0316585_10000811 3300032137 Bacteria 7897
130 Ga0316585_10003883 3300032137 Bacteria 4136
131 Ga0316585_10003993 3300032137 Bacteria 4086
132 Ga0316580_10000511 3300032139 Bacteria 8952
133 Ga0316580_10007862 3300032139 Bacteria 3184
134 Ga0316580_10011435 3300032139 Bacteria 2694
135 Ga0316593_10000231 3300032168 Bacteria 8966
136 Ga0316593_10024650 3300032168 Bacteria 1909
137 Ga0316593_10026718 3300032168 Bacteria 1847
138 Ga0316592_1004657 3300033524 Bacteria 2562
139 Ga0316596_1031089 3300033541 Bacteria 1386
140 Ga0373926_0041824 3300035083 Bacteria 1638
141 Ga0373956_0052913 3300035119 Bacteria 1827
142 Ga0373955_0066971 3300035172 Bacteria 1998
143 Ga0316574_0000749 3300035398 Bacteria 13966
144 Ga0316574_0004219 3300035398 Bacteria 7498
145 Ga0316574_0014434 3300035398 Bacteria 4565
146 Ga0316574_0024346 3300035398 Bacteria 3622
147 Ga0316574_0063295 3300035398 Bacteria 2326
148 Ga0316574_0073242 3300035398 Bacteria 2165
149 Ga0316574_0117717 3300035398 Bacteria 1704
150 Ga0373937_0022138 3300036401 Bacteria 5711
151 Ga0373937_0040638 3300036401 Bacteria 4240
152 Ga0316582_0004037 3300036647 Bacteria 7333
153 Ga0316582_0004557 3300036647 Bacteria 7018
154 Ga0316582_0006226 3300036647 Bacteria 6240
155 Ga0316582_0009194 3300036647 Bacteria 5351
156 Ga0316582_0011810 3300036647 Bacteria 4845
157 Ga0316582_0014798 3300036647 Bacteria 4441
158 Ga0316582_0019744 3300036647 Bacteria 3951
159 Ga0316582_0059983 3300036647 Bacteria 2438
160 Ga0316582_0062900 3300036647 Bacteria 2384
161 Ga0316582_0084837 3300036647 Bacteria 2074
162 Ga0316582_0128426 3300036647 Bacteria 1701
163 Ga0316582_0128542 3300036647 Bacteria 1700
164 Ga0316582_0158041 3300036647 Bacteria 1534
165 Ga0316582_0178638 3300036647 Bacteria 1443
166 Ga0316582_0216927 3300036647 Bacteria 1308
167 Ga0316584_0006731 3300036712 Bacteria 7795
168 Ga0316584_0013312 3300036712 Bacteria 5819
169 Ga0316584_0019676 3300036712 Bacteria 4882
170 Ga0316584_0019927 3300036712 Bacteria 4854
171 Ga0316584_0031817 3300036712 Bacteria 3901
172 Ga0316584_0035921 3300036712 Bacteria 3676
173 Ga0316584_0047856 3300036712 Bacteria 3195
174 Ga0316584_0049286 3300036712 Bacteria 3147
175 Ga0316584_0063034 3300036712 Bacteria 2775
176 Ga0316584_0097090 3300036712 Bacteria 2206
177 Ga0316584_0098256 3300036712 Bacteria 2192
178 Ga0316584_0098892 3300036712 Bacteria 2184
179 Ga0316584_0165452 3300036712 Bacteria 1642
180 Ga0316584_0166906 3300036712 Bacteria 1634
181 Ga0316584_0181627 3300036712 Bacteria 1557
182 Ga0316584_0306787 3300036712 Bacteria 1148
183 Ga0400483_097876 3300039062 Bacteria 25843
184 Ga0400483_174803 3300039062 Unclassified 2604
185 Ga0400483_212963 3300039062 Bacteria 30407
186 Ga0400489_06189 3300039093 Bacteria 1562
187 Ga0451577_0010469 3300042876 Bacteria 8861
188 Ga0451577_0022199 3300042876 Bacteria 5796
189 Ga0451577_0029373 3300042876 Bacteria 4968
190 Ga0451577_0039233 3300042876 Bacteria 4256
191 Ga0451577_0252956 3300042876 Bacteria 1595
192 Ga0451577_0269446 3300042876 Bacteria 1542
193 Ga0453684_0000072 3300044712 Bacteria 442457
194 Ga0453684_0001227 3300044712 Bacteria 78604
195 Ga0453684_0002355 3300044712 Bacteria 46219
196 Ga0453684_0005826 3300044712 Bacteria 23976
197 Ga0453684_0019483 3300044712 Bacteria 10328
198 Ga0453684_0044697 3300044712 Bacteria 5920
199 Ga0453684_0099119 3300044712 Bacteria 3570
200 Ga0453684_0141758 3300044712 Bacteria 2869
201 Ga0453684_0165783 3300044712 Bacteria 2608
202 Ga0453684_0246522 3300044712 Bacteria 2054
203 Ga0451576_0001008 3300045051 Bacteria 52050
204 Ga0451576_0007649 3300045051 Bacteria 12845
205 Ga0451576_0023119 3300045051 Bacteria 6735
206 Ga0451576_0066345 3300045051 Bacteria 3758
207 Ga0451576_0135402 3300045051 Bacteria 2569
208 Ga0495629_0055021 3300046459 Bacteria 2783
209 Ga0495582_0191450 3300046473 Bacteria 1167
210 Ga0495628_0305990 3300046516 Bacteria 1176
211 Ga0495586_0000893 3300046535 Bacteria 17020
212 Ga0495667_0133673 3300046559 Unclassified 1600
213 Ga0495634_0003623 3300046642 Bacteria 12338
214 Ga0495613_0023357 3300046689 Bacteria 4606
215 Ga0495674_0313369 3300047319 Bacteria 1280
216 Ga0495680_0007926 3300047322 Bacteria 9687
217 Ga0496107_0124769 3300048910 Bacteria 1898
218 Ga0496115_0016286 3300048918 Bacteria 5657
219 Ga0501033_0032475 3300049570 Bacteria 3921
220 nmdc:mga0a205_18758_c1 3300050515 Bacteria 6511
221 Ga0070689_100083383
222 Ga0070658_10074980
223 Ga0070666_10285155
224 Ga0070688_100149713
225 Ga0070714_100007332
226 Ga0070708_100053019
227 Ga0070707_100323069
228 Ga0068853_100101333
229 Ga0070695_100061518
230 Ga0068863_100051802
231 Ga0075431_100036398
232 Ga0075433_10015697
233 Ga0105240_10017324
234 Ga0114129_10048431
235 Ga0105242_10118825
236 Ga0105238_10122442
237 Ga0105249_10245310
238 Ga0157370_10045976
239 Ga0207652_10184407
240 Ga0207694_10081993
241 Ga0207664_10010687
242 Ga0207661_10203884
243 Ga0207641_10038564
244 Ga0207641_10518742
245 Ga0265337_1000266
246 Ga0265337_1005974
247 Ga0265319_1006613
248 Ga0265319_1014023
249 Ga0265334_10013000
250 Ga0265323_10000011
251 Ga0265323_10000640
252 Ga0265323_10001993
253 Ga0265323_10005843
254 Ga0265323_10006522
255 Ga0265323_10015978
256 Ga0265323_10026533
257 Ga0265323_10034995
258 Ga0265322_10000202
259 Ga0265322_10001895
260 Ga0265322_10011192
261 Ga0265336_10006070
262 Ga0265338_10000088
263 Ga0265338_10002335
264 Ga0265338_10002606
265 Ga0265338_10002750
266 Ga0265338_10003142
267 Ga0265338_10005724
268 Ga0265338_10008490
269 Ga0265338_10014697
270 Ga0265338_10023453
271 Ga0265338_10032361
272 Ga0265338_10039346
273 Ga0265338_10047735
274 Ga0265338_10049566
275 Ga0265338_10050880
276 Ga0265338_10065603
277 Ga0265324_10017034
278 Ga0265324_10045348
279 Ga0265330_10013707
280 Ga0265330_10038656
281 Ga0265332_10001495
282 Ga0265332_10004098
283 Ga0265332_10008555
284 Ga0265328_10028153
285 Ga0265320_10000590
286 Ga0265320_10006935
287 Ga0265320_10030338
288 Ga0265320_10038857
289 Ga0265329_10001327
290 Ga0265329_10001809
291 Ga0265329_10013342
292 Ga0265340_10000385
293 Ga0265340_10031508
294 Ga0265339_10053884
295 Ga0265339_10061016
296 Ga0265339_10145974
297 Ga0265331_10000209
298 Ga0265327_10004141
299 Ga0265316_10000278
300 Ga0265316_10000798
301 Ga0265316_10000909
302 Ga0265316_10002373
303 Ga0265316_10003395
304 Ga0265316_10008108
305 Ga0265316_10011056
306 Ga0265316_10013550
307 Ga0265316_10038000
308 Ga0265316_10049832
309 Ga0316575_10002785
310 Ga0316575_10007318
311 Ga0316575_10024495
312 Ga0316575_10025838
313 Ga0316579_10001245
314 Ga0316579_10002409
315 Ga0316579_10034789
316 Ga0316579_10039635
317 Ga0316579_10043960
318 Ga0316579_10044709
319 Ga0316579_10049772
320 Ga0265314_10000387
321 Ga0265314_10067190
322 Ga0265342_10000019
323 Ga0265342_10000415
324 Ga0265342_10001594
325 Ga0265342_10023221
326 Ga0265342_10056110
327 Ga0265342_10148071
328 Ga0316576_10002901
329 Ga0316576_10006997
330 Ga0316576_10019038
331 Ga0316576_10077608
332 Ga0316576_10149135
333 Ga0316576_10238047
334 Ga0316578_10004438
335 Ga0316578_10023009
336 Ga0316578_10031843
337 Ga0316578_10043127
338 Ga0316578_10044360
339 Ga0316578_10099742
340 Ga0316577_10000442
341 Ga0316577_10004431
342 Ga0316577_10015471
343 Ga0316577_10038996
344 Ga0316577_10039390
345 Ga0316583_10000756
346 Ga0316583_10004702
347 Ga0316583_10005838
348 Ga0316583_10008723
349 Ga0316585_10000811
350 Ga0316585_10003883
351 Ga0316585_10003993
352 Ga0316580_10000511
353 Ga0316580_10007862
354 Ga0316580_10011435
355 Ga0316593_10000231
356 Ga0316593_10024650
357 Ga0316593_10026718
358 Ga0316592_1004657
359 Ga0316596_1031089
360 Ga0373926_0041824
361 Ga0373956_0052913
362 Ga0373955_0066971
363 Ga0316574_0000749
364 Ga0316574_0004219
365 Ga0316574_0014434
366 Ga0316574_0024346
367 Ga0316574_0063295
368 Ga0316574_0073242
369 Ga0316574_0117717
370 Ga0373937_0022138
371 Ga0373937_0040638
372 Ga0316582_0004037
373 Ga0316582_0004557
374 Ga0316582_0006226
375 Ga0316582_0009194
376 Ga0316582_0011810
377 Ga0316582_0014798
378 Ga0316582_0019744
379 Ga0316582_0059983
380 Ga0316582_0062900
381 Ga0316582_0084837
382 Ga0316582_0128426
383 Ga0316582_0128542
384 Ga0316582_0158041
385 Ga0316582_0178638
386 Ga0316582_0216927
387 Ga0316584_0006731
388 Ga0316584_0013312
389 Ga0316584_0019676
390 Ga0316584_0019927
391 Ga0316584_0031817
392 Ga0316584_0035921
393 Ga0316584_0047856
394 Ga0316584_0049286
395 Ga0316584_0063034
396 Ga0316584_0097090
397 Ga0316584_0098256
398 Ga0316584_0098892
399 Ga0316584_0165452
400 Ga0316584_0166906
401 Ga0316584_0181627
402 Ga0316584_0306787
403 Ga0400483_097876
404 Ga0400483_174803
405 Ga0400483_212963
406 Ga0400489_06189
407 Ga0451577_0010469
408 Ga0451577_0022199
409 Ga0451577_0029373
410 Ga0451577_0039233
411 Ga0451577_0252956
412 Ga0451577_0269446
413 Ga0453684_0000072
414 Ga0453684_0001227
415 Ga0453684_0002355
416 Ga0453684_0005826
417 Ga0453684_0019483
418 Ga0453684_0044697
419 Ga0453684_0099119
420 Ga0453684_0141758
421 Ga0453684_0165783
422 Ga0453684_0246522
423 Ga0451576_0001008
424 Ga0451576_0007649
425 Ga0451576_0023119
426 Ga0451576_0066345
427 Ga0451576_0135402
428 Ga0495629_0055021
429 Ga0495582_0191450
430 Ga0495628_0305990
431 Ga0495586_0000893
432 Ga0495667_0133673
433 Ga0495634_0003623
434 Ga0495613_0023357
435 Ga0495674_0313369
436 Ga0495680_0007926
437 Ga0496107_0124769
438 Ga0496115_0016286
439 Ga0501033_0032475
440 nmdc:mga0a205_18758_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00180

Iso_dh

Isocitrate/isopropylmalate dehydrogenase

36

394

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2g4o-assembly1.cif.gz_A anomalous substructure of 3-isopropylmalate dehydrogenase 0.9424 1 367
2g4o-assembly1.cif.gz_A anomalous substructure of 3-isopropylmalate dehydrogenase 0.9397 1 367
5j34-assembly2.cif.gz_D isopropylmalate dehydrogenase k232m mutant 0.9094 2 366
3r8w-assembly2.cif.gz_D structure of 3-isopropylmalate dehydrogenase isoform 2 from arabidopsis thaliana at 2.2 angstrom resolution 0.9078 2 366
1dr8-assembly1.cif.gz_B structure of modified 3-isopropylmalate dehydrogenase at the c-terminus, hd177 0.906 5 367
ID Description Score Start End Superfamily
1w0dB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9501 1 367 3.40.718.10
1w0dB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9473 1 367 3.40.718.10
af_P76251_1_360_3.40.718.10 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9074 1 366 3.40.718.10
1x0lB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9042 4 366 3.40.718.10
5hn5A00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9031 4 366 3.40.718.10
ID Description Score Start End GO Terms
AF-A0A3D5FWU8-F1-model_v4 deleted 0.9637 1 100
AF-A0A4Q4CKH5-F1-model_v4 Tartrate dehydrogenase 0.9636 3 91
AF-A0A484HJS5-F1-model_v4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.9625 2 366 GO:0000287
GO:0003862
GO:0051287
AF-A0A7Z9UXS5-F1-model_v4 Tartrate dehydrogenase 0.9624 2 98
AF-A0A382X5Y5-F1-model_v4 Isopropylmalate dehydrogenase-like domain-containing protein 0.9593 1 100

Map