F331516

General Info

Members Datasets Scaffolds Average Seq Length
219 150 438 362

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0070944|Ga0501031_0070944_494_1735
Length 402
Sequence MPSETDEGVASGEVAHAYRSPFLDLPGAVEAMGQDAGVAAHYGSPLVEQRTLVAGDAIVDLSSRAVLSVAGPDRLTWLNSLTSQRLDRLSPGESSETLLLDVTGHLEYAARVIDDGSTTWLLIERDEADGLRTWLESMRFMLRVEVVDRTAEFATVGALGEPFTGSERTDPAAATSNGIALVWRDPWHSVVPGGHQYARTEKHPGSGWTWSETLLPRAMLGRLAQEVAEGRRRAAGTLALEALRIAAWRPRLATEKDDRTIPHELDWLRTAVHLDKGCYRGQETVAKVHNLGHPPRRLVMLHLDGSEGVLPGPGSPVLAPRAGEYAEVGTVTSSALHFELGPIALAVLKRQTDPEATLQVEAADGTVVSAAQEIVVPPDAGAEAHVPRLPRLGQVTRPGRSS

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
20 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
68 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
69 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
70 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
77 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
78 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
79 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
80 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
81 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
82 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
83 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
84 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
85 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
86 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
92 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
93 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
94 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
95 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
96 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
97 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
98 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
99 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
100 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
101 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
102 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
103 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
115 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
121 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
122 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
123 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
124 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
125 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
126 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
127 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
128 2643221566 Microbacterium sp. Root166 Isolate Unclassified
129 2643221572 Leifsonia sp. Root60 Isolate Unclassified
130 2643221575 Microbacterium sp. Root61 Isolate Unclassified
131 2643221597 Microbacterium sp. Root180 Isolate Unclassified
132 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
133 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
134 2773857759 Microbacterium sp. 1294 Isolate Unclassified
135 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
136 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
137 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
138 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
139 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
140 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
141 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
142 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
143 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
144 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
145 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
146 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
147 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
148 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
149 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
150 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.67
Metatranscriptomes 1.37
Isolates 10.96

Biome Distribution

Category Percentage (%)
Aerial Root 0.46
Bulb 0
Endosphere 5.48
Nodule 0
Rhizoplane 5.94
Rhizosphere 68.49
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0070944 3300049568 Bacteria 2269
2 Ga0070658_10000242 3300005327 Bacteria 48504
3 Ga0070658_10009630 3300005327 Bacteria 7757
4 Ga0070658_10066751 3300005327 Bacteria 2939
5 Ga0070658_10180273 3300005327 Bacteria 1777
6 Ga0068868_100016511 3300005338 Bacteria 5484
7 Ga0068868_100170213 3300005338 Bacteria 1803
8 Ga0070660_100009493 3300005339 Bacteria 6846
9 Ga0070660_100168043 3300005339 Bacteria 1770
10 Ga0070675_100312875 3300005354 Bacteria 1386
11 Ga0070659_100003188 3300005366 Bacteria 11679
12 Ga0070667_100103504 3300005367 Bacteria 2461
13 Ga0070710_10019792 3300005437 Bacteria 3484
14 Ga0070705_100011958 3300005440 Bacteria 4396
15 Ga0070685_10002096 3300005466 Bacteria 10301
16 Ga0070707_100003232 3300005468 Bacteria 15432
17 Ga0068853_100054092 3300005539 Bacteria 3459
18 Ga0070672_100283288 3300005543 Bacteria 1402
19 Ga0070693_100090926 3300005547 Bacteria 1840
20 Ga0068855_100001410 3300005563 Bacteria 29846
21 Ga0070702_100066695 3300005615 Bacteria 2112
22 Ga0068852_100033847 3300005616 Bacteria 4247
23 Ga0068852_100152043 3300005616 Bacteria 2153
24 Ga0068864_100039667 3300005618 Bacteria 4024
25 Ga0068866_10014094 3300005718 Bacteria 3521
26 Ga0068851_10000015 3300005834 Bacteria 145191
27 Ga0068863_100186271 3300005841 Bacteria 1994
28 Ga0068858_100000023 3300005842 Bacteria 167824
29 Ga0075369_10043044 3300006186 Bacteria 1936
30 Ga0105240_10003008 3300009093 Bacteria 26523
31 Ga0105240_10156128 3300009093 Bacteria 2713
32 Ga0105245_10004311 3300009098 Bacteria 12593
33 Ga0105243_10001650 3300009148 Bacteria 19335
34 Ga0105241_10006040 3300009174 Bacteria 8932
35 Ga0105242_10114785 3300009176 Bacteria 2302
36 Ga0105248_10000424 3300009177 Bacteria 48349
37 Ga0105248_10077758 3300009177 Bacteria 3730
38 Ga0105237_10014492 3300009545 Bacteria 8241
39 Ga0105237_10057134 3300009545 Bacteria 3905
40 Ga0105237_10074674 3300009545 Bacteria 3382
41 Ga0105238_10003710 3300009551 Bacteria 15197
42 Ga0105238_10052439 3300009551 Bacteria 4100
43 Ga0105246_10193477 3300011119 Bacteria 1576
44 Ga0157371_10001468 3300013102 Bacteria 24466
45 Ga0157370_10035185 3300013104 Bacteria 4871
46 Ga0157369_10001655 3300013105 Bacteria 27181
47 Ga0157369_10204734 3300013105 Bacteria 2070
48 Ga0157369_10248904 3300013105 Bacteria 1855
49 Ga0171462_1004 3300013250 Bacteria 678877
50 Ga0157378_10060881 3300013297 Bacteria 3368
51 Ga0157372_10322308 3300013307 Bacteria 1799
52 Ga0206353_10210415 3300020082 Bacteria 3451
53 Ga0224712_10027913 3300022467 Bacteria 2012
54 Ga0209148_1000804 3300025254 Bacteria 22935
55 Ga0207656_10000001 3300025321 Bacteria 1323684
56 Ga0207655_1017153 3300025728 Bacteria 3918
57 Ga0207642_10075245 3300025899 Bacteria 1621
58 Ga0207705_10000001 3300025909 Bacteria 2061880
59 Ga0207705_10047961 3300025909 Bacteria 3072
60 Ga0207705_10249966 3300025909 Bacteria 1352
61 Ga0207684_10083202 3300025910 Bacteria 2726
62 Ga0207654_10000001 3300025911 Bacteria 1816198
63 Ga0207695_10000921 3300025913 Bacteria 52654
64 Ga0207695_10017263 3300025913 Bacteria 8403
65 Ga0207671_10000001 3300025914 Bacteria 1318881
66 Ga0207671_10041954 3300025914 Bacteria 3386
67 Ga0207671_10124956 3300025914 Bacteria 1969
68 Ga0207657_10021035 3300025919 Bacteria 6151
69 Ga0207657_10054893 3300025919 Bacteria 3443
70 Ga0207649_10135072 3300025920 Bacteria 1681
71 Ga0207646_10014344 3300025922 Bacteria 7530
72 Ga0207694_10000052 3300025924 Bacteria 157700
73 Ga0207687_10020338 3300025927 Bacteria 4403
74 Ga0207690_10000618 3300025932 Bacteria 22985
75 Ga0207690_10015258 3300025932 Bacteria 4652
76 Ga0207709_10005233 3300025935 Bacteria 7381
77 Ga0207709_10044868 3300025935 Bacteria 2674
78 Ga0207711_10000299 3300025941 Bacteria 53150
79 Ga0207711_10008167 3300025941 Bacteria 8762
80 Ga0207667_10004099 3300025949 Bacteria 17907
81 Ga0207667_10007622 3300025949 Bacteria 12968
82 Ga0207658_10021098 3300025986 Bacteria 4517
83 Ga0207658_10080269 3300025986 Bacteria 2498
84 Ga0207677_10106068 3300026023 Bacteria 2081
85 Ga0207703_10000137 3300026035 Bacteria 89265
86 Ga0207702_10383326 3300026078 Bacteria 1352
87 Ga0207641_10243209 3300026088 Bacteria 1678
88 Ga0207676_10167661 3300026095 Bacteria 1910
89 Ga0207674_10004733 3300026116 Bacteria 16313
90 Ga0207674_10214819 3300026116 Bacteria 1872
91 Ga0207698_10000666 3300026142 Bacteria 19948
92 Ga0207698_10005060 3300026142 Bacteria 8089
93 Ga0307514_10010986 3300031649 Bacteria 7558
94 Ga0316575_10000157 3300031665 Bacteria 17194
95 Ga0307406_10000031 3300031901 Bacteria 87391
96 Ga0316587_1012688 3300033529 Bacteria 1372
97 Ga0395899_0020166 3300037312 Bacteria 5058
98 Ga0395900_0085677 3300037418 Bacteria 3238
99 Ga0395900_0107769 3300037418 Bacteria 2862
100 Ga0395900_0211896 3300037418 Bacteria 1956
101 Ga0395898_0089989 3300037466 Bacteria 2953
102 Ga0395898_0166174 3300037466 Bacteria 2110
103 Ga0395898_0308351 3300037466 Bacteria 1510
104 Ga0395905_0027186 3300037471 Bacteria 5396
105 Ga0395901_0000906 3300038443 Bacteria 32585
106 Ga0395901_0036431 3300038443 Bacteria 5085
107 Ga0395901_0121670 3300038443 Bacteria 2743
108 Ga0451797_0718472 3300041453 Bacteria 2643
109 Ga0466965_0054563 3300044683 Bacteria 1988
110 Ga0466966_0090243 3300044684 Bacteria 1903
111 Ga0466968_0026597 3300044735 Bacteria 2376
112 Ga0466960_0085790 3300044901 Bacteria 1595
113 Ga0495590_0000119 3300046457 Bacteria 47435
114 Ga0495643_0111333 3300046522 Bacteria 1392
115 Ga0495589_0091422 3300046794 Bacteria 1478
116 Ga0495672_0008186 3300047320 Bacteria 7754
117 Ga0496101_0065460 3300048904 Bacteria 2649
118 Ga0496103_0006028 3300048906 Bacteria 7245
119 Ga0496104_0057495 3300048907 Bacteria 3680
120 Ga0496105_0042043 3300048908 Bacteria 3768
121 Ga0496105_0145360 3300048908 Bacteria 1950
122 Ga0496109_0033704 3300048912 Bacteria 4608
123 Ga0496110_0062558 3300048913 Bacteria 3287
124 Ga0496113_0345387 3300048916 Bacteria 1193
125 Ga0496114_0024963 3300048917 Bacteria 4881
126 Ga0496114_0041838 3300048917 Bacteria 3797
127 Ga0496114_0198004 3300048917 Bacteria 1759
128 Ga0496114_0525726 3300048917 Bacteria 1046
129 Ga0496117_0001389 3300048920 Bacteria 35115
130 Ga0496117_0001882 3300048920 Bacteria 28223
131 Ga0496117_0140675 3300048920 Bacteria 1446
132 Ga0496118_0021610 3300048921 Bacteria 5657
133 Ga0496118_0209113 3300048921 Bacteria 1147
134 Ga0496119_0002996 3300048922 Bacteria 17913
135 Ga0496119_0004403 3300048922 Bacteria 14041
136 Ga0496119_0008862 3300048922 Bacteria 8750
137 Ga0496119_0021893 3300048922 Bacteria 4598
138 Ga0496119_0041137 3300048922 Bacteria 2948
139 Ga0496120_0000878 3300048923 Bacteria 42397
140 Ga0496120_0001833 3300048923 Bacteria 23715
141 Ga0496120_0003203 3300048923 Bacteria 15219
142 Ga0496120_0008376 3300048923 Bacteria 7515
143 Ga0496120_0025369 3300048923 Bacteria 3680
144 Ga0496120_0031991 3300048923 Bacteria 3178
145 Ga0496121_0000015 3300048924 Bacteria 571958
146 Ga0496121_0123970 3300048924 Bacteria 1946
147 Ga0496122_0000420 3300048925 Bacteria 89921
148 Ga0496122_0006853 3300048925 Bacteria 12910
149 Ga0496123_0000354 3300048926 Bacteria 86153
150 Ga0496123_0008491 3300048926 Bacteria 9424
151 Ga0496124_0002763 3300048927 Bacteria 22327
152 Ga0496124_0002851 3300048927 Bacteria 21850
153 Ga0496125_0001344 3300048928 Bacteria 36236
154 Ga0496125_0005189 3300048928 Bacteria 14634
155 Ga0496125_0010731 3300048928 Bacteria 9230
156 Ga0496126_0001649 3300048929 Bacteria 33603
157 Ga0496126_0135523 3300048929 Bacteria 2124
158 Ga0501032_0006872 3300049569 Bacteria 8340
159 Ga0501033_0145451 3300049570 Bacteria 1712
160 Ga0501034_0018926 3300049571 Bacteria 7054
161 Ga0501034_0037674 3300049571 Bacteria 4897
162 Ga0501034_0043883 3300049571 Bacteria 4522
163 Ga0501034_0057911 3300049571 Bacteria 3895
164 Ga0501034_0062538 3300049571 Bacteria 3738
165 Ga0501034_0146091 3300049571 Bacteria 2342
166 Ga0501036_0008682 3300049572 Bacteria 8337
167 Ga0501037_0012832 3300049573 Bacteria 6175
168 Ga0501038_0006592 3300049574 Bacteria 10736
169 Ga0501039_0024930 3300049575 Bacteria 4595
170 Ga0501042_0213437 3300049578 Bacteria 1392
171 Ga0501043_0058075 3300049579 Bacteria 3037
172 Ga0501046_0014566 3300049580 Bacteria 6628
173 Ga0501046_0031887 3300049580 Bacteria 4269
174 Ga0501047_0008648 3300049581 Bacteria 9617
175 Ga0501047_0009443 3300049581 Bacteria 9214
176 Ga0501067_0203094 3300049583 Bacteria 1104
177 Ga0501069_0095267 3300049585 Bacteria 1686
178 Ga0501070_0001725 3300049586 Bacteria 19327
179 Ga0501070_0028716 3300049586 Bacteria 4663
180 Ga0501071_0000023 3300049587 Bacteria 51151
181 Ga0501073_0000020 3300049589 Bacteria 139560
182 Ga0501073_0023123 3300049589 Bacteria 4468
183 Ga0501044_0015730 3300049823 Bacteria 8148
184 Ga0501044_0027761 3300049823 Bacteria 5976
185 Ga0501044_0062953 3300049823 Bacteria 3791
186 Ga0500643_000224 3300053087 Bacteria 52829
187 Ga0500651_0001153 3300053093 Bacteria 13102
188 Ga0500556_0000100 3300053104 Bacteria 78417
189 Ga0500568_0000100 3300053139 Bacteria 78717
190 Ga0500568_0006520 3300053139 Bacteria 5847
191 Ga0500568_0011745 3300053139 Bacteria 4047
192 Ga0500573_0000757 3300053140 Bacteria 14484
193 Ga0500573_0122007 3300053140 Bacteria 1450
194 Ga0500590_006171 3300053148 Bacteria 5824
195 Ga0500616_0000089 3300053153 Bacteria 191075
196 2588109271 2585428157 Bacteria 3018951
197 2643849010 2643221566 Bacteria 3460379
198 2643876296 2643221572 Bacteria 3614809
199 2643886319 2643221575 Bacteria 4022601
200 2643995186 2643221597 Bacteria 3347721
201 2644383351 2643221669 Bacteria 3611286
202 2758226773 2757320536 Bacteria 3629334
203 2774383314 2773857759 Bacteria 2963774
204 2774398665 2773857763 Bacteria 4180068
205 2812324075 2811994872 Bacteria 4121241
206 2821270798 2821268502 Bacteria 3750023
207 2857720670 2857720070 Bacteria 3189373
208 2857730537 2857729791 Bacteria 4040535
209 2862993487 2862993130 Bacteria 3860849
210 2870630997 2870628048 Bacteria 3696012
211 2895660476 2895660088 Bacteria 3782833
212 2928091445 2928090899 Bacteria 3158267
213 2928123785 2928121344 Bacteria 3972376
214 2939659284 2939657138 Bacteria 3740283
215 2964328585 2964326757 Bacteria 3290868
216 2977253498 2977251589 Bacteria 2952848
217 2984581810 2984580707 Bacteria 3351387
218 8002811924 8002811521 Bacteria 2942897
219 8016256879 8016254467 Bacteria 3797036
220 Ga0501031_0070944
221 Ga0070658_10000242
222 Ga0070658_10009630
223 Ga0070658_10066751
224 Ga0070658_10180273
225 Ga0068868_100016511
226 Ga0068868_100170213
227 Ga0070660_100009493
228 Ga0070660_100168043
229 Ga0070675_100312875
230 Ga0070659_100003188
231 Ga0070667_100103504
232 Ga0070710_10019792
233 Ga0070705_100011958
234 Ga0070685_10002096
235 Ga0070707_100003232
236 Ga0068853_100054092
237 Ga0070672_100283288
238 Ga0070693_100090926
239 Ga0068855_100001410
240 Ga0070702_100066695
241 Ga0068852_100033847
242 Ga0068852_100152043
243 Ga0068864_100039667
244 Ga0068866_10014094
245 Ga0068851_10000015
246 Ga0068863_100186271
247 Ga0068858_100000023
248 Ga0075369_10043044
249 Ga0105240_10003008
250 Ga0105240_10156128
251 Ga0105245_10004311
252 Ga0105243_10001650
253 Ga0105241_10006040
254 Ga0105242_10114785
255 Ga0105248_10000424
256 Ga0105248_10077758
257 Ga0105237_10014492
258 Ga0105237_10057134
259 Ga0105237_10074674
260 Ga0105238_10003710
261 Ga0105238_10052439
262 Ga0105246_10193477
263 Ga0157371_10001468
264 Ga0157370_10035185
265 Ga0157369_10001655
266 Ga0157369_10204734
267 Ga0157369_10248904
268 Ga0171462_1004
269 Ga0157378_10060881
270 Ga0157372_10322308
271 Ga0206353_10210415
272 Ga0224712_10027913
273 Ga0209148_1000804
274 Ga0207656_10000001
275 Ga0207655_1017153
276 Ga0207642_10075245
277 Ga0207705_10000001
278 Ga0207705_10047961
279 Ga0207705_10249966
280 Ga0207684_10083202
281 Ga0207654_10000001
282 Ga0207695_10000921
283 Ga0207695_10017263
284 Ga0207671_10000001
285 Ga0207671_10041954
286 Ga0207671_10124956
287 Ga0207657_10021035
288 Ga0207657_10054893
289 Ga0207649_10135072
290 Ga0207646_10014344
291 Ga0207694_10000052
292 Ga0207687_10020338
293 Ga0207690_10000618
294 Ga0207690_10015258
295 Ga0207709_10005233
296 Ga0207709_10044868
297 Ga0207711_10000299
298 Ga0207711_10008167
299 Ga0207667_10004099
300 Ga0207667_10007622
301 Ga0207658_10021098
302 Ga0207658_10080269
303 Ga0207677_10106068
304 Ga0207703_10000137
305 Ga0207702_10383326
306 Ga0207641_10243209
307 Ga0207676_10167661
308 Ga0207674_10004733
309 Ga0207674_10214819
310 Ga0207698_10000666
311 Ga0207698_10005060
312 Ga0307514_10010986
313 Ga0316575_10000157
314 Ga0307406_10000031
315 Ga0316587_1012688
316 Ga0395899_0020166
317 Ga0395900_0085677
318 Ga0395900_0107769
319 Ga0395900_0211896
320 Ga0395898_0089989
321 Ga0395898_0166174
322 Ga0395898_0308351
323 Ga0395905_0027186
324 Ga0395901_0000906
325 Ga0395901_0036431
326 Ga0395901_0121670
327 Ga0451797_0718472
328 Ga0466965_0054563
329 Ga0466966_0090243
330 Ga0466968_0026597
331 Ga0466960_0085790
332 Ga0495590_0000119
333 Ga0495643_0111333
334 Ga0495589_0091422
335 Ga0495672_0008186
336 Ga0496101_0065460
337 Ga0496103_0006028
338 Ga0496104_0057495
339 Ga0496105_0042043
340 Ga0496105_0145360
341 Ga0496109_0033704
342 Ga0496110_0062558
343 Ga0496113_0345387
344 Ga0496114_0024963
345 Ga0496114_0041838
346 Ga0496114_0198004
347 Ga0496114_0525726
348 Ga0496117_0001389
349 Ga0496117_0001882
350 Ga0496117_0140675
351 Ga0496118_0021610
352 Ga0496118_0209113
353 Ga0496119_0002996
354 Ga0496119_0004403
355 Ga0496119_0008862
356 Ga0496119_0021893
357 Ga0496119_0041137
358 Ga0496120_0000878
359 Ga0496120_0001833
360 Ga0496120_0003203
361 Ga0496120_0008376
362 Ga0496120_0025369
363 Ga0496120_0031991
364 Ga0496121_0000015
365 Ga0496121_0123970
366 Ga0496122_0000420
367 Ga0496122_0006853
368 Ga0496123_0000354
369 Ga0496123_0008491
370 Ga0496124_0002763
371 Ga0496124_0002851
372 Ga0496125_0001344
373 Ga0496125_0005189
374 Ga0496125_0010731
375 Ga0496126_0001649
376 Ga0496126_0135523
377 Ga0501032_0006872
378 Ga0501033_0145451
379 Ga0501034_0018926
380 Ga0501034_0037674
381 Ga0501034_0043883
382 Ga0501034_0057911
383 Ga0501034_0062538
384 Ga0501034_0146091
385 Ga0501036_0008682
386 Ga0501037_0012832
387 Ga0501038_0006592
388 Ga0501039_0024930
389 Ga0501042_0213437
390 Ga0501043_0058075
391 Ga0501046_0014566
392 Ga0501046_0031887
393 Ga0501047_0008648
394 Ga0501047_0009443
395 Ga0501067_0203094
396 Ga0501069_0095267
397 Ga0501070_0001725
398 Ga0501070_0028716
399 Ga0501071_0000023
400 Ga0501073_0000020
401 Ga0501073_0023123
402 Ga0501044_0015730
403 Ga0501044_0027761
404 Ga0501044_0062953
405 Ga0500643_000224
406 Ga0500651_0001153
407 Ga0500556_0000100
408 Ga0500568_0000100
409 Ga0500568_0006520
410 Ga0500568_0011745
411 Ga0500573_0000757
412 Ga0500573_0122007
413 Ga0500590_006171
414 Ga0500616_0000089
415 2588109271
416 2643849010
417 2643876296
418 2643886319
419 2643995186
420 2644383351
421 2758226773
422 2774383314
423 2774398665
424 2812324075
425 2821270798
426 2857720670
427 2857730537
428 2862993487
429 2870630997
430 2895660476
431 2928091445
432 2928123785
433 2939659284
434 2964328585
435 2977253498
436 2984581810
437 8002811924
438 8016256879

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01571

GCV_T

Aminomethyltransferase folate-binding domain

27

162

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1woo-assembly1.cif.gz_A crystal structure of t-protein of the glycine cleavage system 0.7809 20 356
4paa-assembly2.cif.gz_B crystal structure of the mature form of rat dmgdh complexed with tetrahydrofolate 0.7766 40 355
4pab-assembly2.cif.gz_B crystal structure of the precursor form of rat dmgdh complexed with tetrahydrofolate 0.7639 40 355
5l46-assembly1.cif.gz_A crystal structure of human dimethylglycine-dehydrogenase 0.7613 40 355
1yx2-assembly1.cif.gz_A crystal structure of the probable aminomethyltransferase from bacillus subtilis 0.7554 31 356
ID Description Score Start End Superfamily
1wosA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9213 56 140 3.30.70.1400
1yx2B02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9177 59 140 3.30.70.1400
af_E9AH81_4_151_3.30.70.1400 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9088 51 156 3.30.70.1400
3girA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9082 59 139 3.30.70.1400
af_G5EE11_2_112_3.30.70.1400 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9012 49 143 3.30.70.1400
ID Description Score Start End GO Terms
AF-A0A3D5Y0V4-F1-model_v4 Aminomethyltransferase folate-binding domain-containing protein 0.9497 54 138 GO:0016226
AF-K1DXA9-F1-model_v4 Folate-binding protein 0.9424 10 357 GO:0016226
AF-A0A1E8CU36-F1-model_v4 Aminomethyltransferase 0.9413 10 357 GO:0008168
GO:0016226
GO:0032259
AF-A0A1E8CU36-F1-model_v4 Aminomethyltransferase 0.9385 10 357 GO:0008168
GO:0016226
GO:0032259
AF-A0A2V9D826-F1-model_v4 Aminomethyltransferase folate-binding domain-containing protein 0.938 20 143

Map