F330818

General Info

Members Datasets Scaffolds Average Seq Length
219 155 438 495

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100003987|Ga0070706_10000398710
Length 565
Sequence MPAKMNVIVKTGRLVDEASDALLLCHWEGEPFGDQAATIDAAVKGRLKGLLKSREFSGLACQISILHVAPGERLRAKRIVLVGLGKRAEASLETLRRALGTAAKAVREVGAKSFASPVGDIMRARTGRANANGARRGDPIEPDQAAQAMVEGALLGLYQFNVYRTERNGGVKEIRSITFVVDRQARRLQIEQSVRWGQAIAEATIFVRDLCNHPANVVTPTYIAKEAKKIAQNPRVRCTVLDRLQMERIGMGAMLGVARGSHEPPKFVILEYRGGPRNNRPIALVGKTVTFDSGGISIKPADNMDQMKADMTGGAAVLAAVRTAVRMRLPLNIVGIIPATENMPGGSATKPGDVLTSLSGKTIEVINTDAEGRLILADGLTYAIRYNPEVLVDIATLTGACVVALGNVAIGVLGNNDPLIQELKQAGEESGERAWQLPLWDDYYDLIKSDVADVKNTGGRPGGTITAAAFLSKFIGKAVWAHLDIASTDWSDREKAYIPKGATGVGARLLIQFLRNRAQGQQGTAANGRSRRRVSSSPHRQGAKVKKGARGHGKKARLGAPRVGG

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
40 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
58 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
59 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
60 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
61 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
62 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
63 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
64 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
67 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
69 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
70 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
71 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
72 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
73 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
74 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
75 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
78 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
84 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
85 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
86 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
87 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
88 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
95 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
96 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
97 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
100 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
101 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
102 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
113 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
119 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
120 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
121 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
127 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
128 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
138 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
139 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 2860339153 Pseudomonas sp. JAI111 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.63
Metatranscriptomes 0.91
Isolates 0.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.46
Nodule 0
Rhizoplane 0.46
Rhizosphere 95.89
Stem 0
Stem Tuber 0
Unclassified 0.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100003987 3300005467 Bacteria 14371
2 Ga0065704_10111895 3300005289 Bacteria 1946
3 Ga0070670_100044853 3300005331 Bacteria 3801
4 Ga0070680_100017781 3300005336 Bacteria 5608
5 Ga0068868_100097520 3300005338 Bacteria 2376
6 Ga0070660_100022319 3300005339 Bacteria 4679
7 Ga0070660_100091429 3300005339 Bacteria 2400
8 Ga0070689_100086916 3300005340 Bacteria 2459
9 Ga0070692_10002477 3300005345 Bacteria 7181
10 Ga0070669_100019421 3300005353 Bacteria 4854
11 Ga0070675_100020712 3300005354 Bacteria 5248
12 Ga0070703_10000095 3300005406 Bacteria 45165
13 Ga0070705_100007973 3300005440 Bacteria 5234
14 Ga0070705_100034416 3300005440 Bacteria 2832
15 Ga0070700_100030193 3300005441 Bacteria 3237
16 Ga0070694_100000018 3300005444 Bacteria 73566
17 Ga0070694_100019111 3300005444 Bacteria 4356
18 Ga0070694_100058844 3300005444 Bacteria 2616
19 Ga0070708_100000536 3300005445 Bacteria 28556
20 Ga0068867_100009070 3300005459 Bacteria 7018
21 Ga0070706_100000108 3300005467 Bacteria 101389
22 Ga0070706_100007534 3300005467 Bacteria 10201
23 Ga0070707_100047348 3300005468 Bacteria 4116
24 Ga0070698_100070600 3300005471 Bacteria 3504
25 Ga0070699_100000015 3300005518 Bacteria 211169
26 Ga0070699_100006407 3300005518 Bacteria 10250
27 Ga0070679_100002458 3300005530 Bacteria 16781
28 Ga0070679_100012628 3300005530 Bacteria 8079
29 Ga0070697_100000032 3300005536 Bacteria 103343
30 Ga0070697_100043623 3300005536 Bacteria 3632
31 Ga0070697_100046469 3300005536 Bacteria 3519
32 Ga0070696_100010566 3300005546 Bacteria 6189
33 Ga0070665_100043205 3300005548 Bacteria 4530
34 Ga0068854_100027987 3300005578 Bacteria 3890
35 Ga0068863_100098101 3300005841 Bacteria 2783
36 Ga0081539_10000103 3300005985 Bacteria 197839
37 Ga0081539_10009826 3300005985 Bacteria 7901
38 Ga0081539_10018840 3300005985 Bacteria 4758
39 Ga0081539_10060302 3300005985 Bacteria 2084
40 Ga0075428_100012945 3300006844 Bacteria 9276
41 Ga0075428_100058222 3300006844 Bacteria 4230
42 Ga0075428_100255925 3300006844 Bacteria 1886
43 Ga0075430_100046797 3300006846 Bacteria 3653
44 Ga0075435_100189561 3300007076 Bacteria 1740
45 Ga0099794_10041099 3300007265 Bacteria 2201
46 Ga0105240_10008754 3300009093 Bacteria 14425
47 Ga0105240_10050784 3300009093 Bacteria 5225
48 Ga0111539_10023375 3300009094 Bacteria 7593
49 Ga0111539_10153183 3300009094 Bacteria 2698
50 Ga0114129_10009506 3300009147 Bacteria 13866
51 Ga0114129_10083776 3300009147 Bacteria 4427
52 Ga0114129_10231131 3300009147 Bacteria 2491
53 Ga0105243_10087472 3300009148 Bacteria 2558
54 Ga0105241_10000025 3300009174 Bacteria 132929
55 Ga0157371_10035851 3300013102 Bacteria 3553
56 Ga0157371_10042915 3300013102 Bacteria 3223
57 Ga0157369_10031322 3300013105 Bacteria 5856
58 Ga0157369_10066020 3300013105 Bacteria 3893
59 Ga0157379_10171527 3300014968 Bacteria 1958
60 Ga0228598_1002111 3300024227 Bacteria 4347
61 Ga0207653_10000119 3300025885 Bacteria 55599
62 Ga0207705_10008149 3300025909 Bacteria 7673
63 Ga0207684_10000444 3300025910 Bacteria 54493
64 Ga0207684_10000493 3300025910 Bacteria 50013
65 Ga0207684_10000737 3300025910 Bacteria 38452
66 Ga0207654_10000492 3300025911 Bacteria 22614
67 Ga0207695_10044066 3300025913 Bacteria 4749
68 Ga0207695_10074352 3300025913 Bacteria 3460
69 Ga0207657_10029212 3300025919 Bacteria 5021
70 Ga0207657_10059789 3300025919 Bacteria 3272
71 Ga0207652_10006016 3300025921 Bacteria 9821
72 Ga0207646_10000547 3300025922 Bacteria 49465
73 Ga0207711_10216975 3300025941 Bacteria 1748
74 Ga0207661_10051655 3300025944 Bacteria 3281
75 Ga0207661_10074245 3300025944 Bacteria 2787
76 Ga0207667_10068048 3300025949 Bacteria 3709
77 Ga0207667_10112870 3300025949 Bacteria 2802
78 Ga0207678_10039146 3300026067 Bacteria 4115
79 Ga0207708_10039147 3300026075 Bacteria 3611
80 Ga0207641_10105400 3300026088 Bacteria 2490
81 Ga0207648_10049875 3300026089 Bacteria 3661
82 Ga0209974_10018652 3300027876 Bacteria 2301
83 Ga0268266_10026804 3300028379 Bacteria 4904
84 Ga0265337_1002491 3300028556 Bacteria 8394
85 Ga0265337_1006664 3300028556 Bacteria 4416
86 Ga0265326_10000673 3300028558 Bacteria 12677
87 Ga0265326_10005046 3300028558 Bacteria 4179
88 Ga0265319_1000618 3300028563 Bacteria 23430
89 Ga0265319_1000705 3300028563 Bacteria 21820
90 Ga0265319_1004921 3300028563 Bacteria 6525
91 Ga0265334_10012031 3300028573 Bacteria 3635
92 Ga0265318_10006123 3300028577 Bacteria 5575
93 Ga0265318_10007771 3300028577 Bacteria 4821
94 Ga0265323_10000273 3300028653 Bacteria 29930
95 Ga0265322_10000343 3300028654 Bacteria 19580
96 Ga0265322_10008336 3300028654 Bacteria 3020
97 Ga0265336_10000526 3300028666 Bacteria 22135
98 Ga0265338_10000250 3300028800 Bacteria 98449
99 Ga0265338_10000614 3300028800 Bacteria 62477
100 Ga0265338_10004885 3300028800 Bacteria 17854
101 Ga0265338_10009816 3300028800 Bacteria 11350
102 Ga0265338_10024865 3300028800 Bacteria 6103
103 Ga0265338_10026944 3300028800 Bacteria 5781
104 Ga0265338_10048841 3300028800 Bacteria 3844
105 Ga0265324_10000480 3300029957 Bacteria 28000
106 Ga0265324_10008671 3300029957 Bacteria 4022
107 Ga0265760_10000021 3300031090 Bacteria 70611
108 Ga0265330_10001125 3300031235 Bacteria 16048
109 Ga0265330_10053740 3300031235 Bacteria 1762
110 Ga0265332_10000265 3300031238 Bacteria 41595
111 Ga0265332_10005944 3300031238 Bacteria 5581
112 Ga0265332_10026911 3300031238 Bacteria 2520
113 Ga0265332_10031676 3300031238 Bacteria 2306
114 Ga0265320_10000681 3300031240 Bacteria 25884
115 Ga0265320_10024380 3300031240 Bacteria 3200
116 Ga0265325_10004791 3300031241 Bacteria 8475
117 Ga0265325_10012378 3300031241 Bacteria 4880
118 Ga0265325_10057054 3300031241 Bacteria 1992
119 Ga0265329_10000872 3300031242 Bacteria 15253
120 Ga0265340_10003546 3300031247 Bacteria 8780
121 Ga0265340_10013828 3300031247 Bacteria 4230
122 Ga0265340_10023981 3300031247 Bacteria 3105
123 Ga0265339_10000724 3300031249 Bacteria 25582
124 Ga0265331_10001458 3300031250 Bacteria 17391
125 Ga0265327_10007942 3300031251 Bacteria 8031
126 Ga0265316_10001057 3300031344 Bacteria 29841
127 Ga0265316_10036558 3300031344 Bacteria 3970
128 Ga0265316_10066559 3300031344 Bacteria 2788
129 Ga0307408_100051523 3300031548 Bacteria 2965
130 Ga0265313_10000880 3300031595 Bacteria 30371
131 Ga0265313_10019080 3300031595 Bacteria 3832
132 Ga0265314_10001400 3300031711 Bacteria 27040
133 Ga0265314_10003305 3300031711 Bacteria 15746
134 Ga0265314_10024416 3300031711 Bacteria 4584
135 Ga0265314_10027862 3300031711 Bacteria 4222
136 Ga0265342_10000887 3300031712 Bacteria 29811
137 Ga0265342_10002978 3300031712 Bacteria 14220
138 Ga0307411_10091702 3300032005 Bacteria 2123
139 Ga0316583_10002696 3300032133 Bacteria 6206
140 Ga0373956_0058603 3300035119 Bacteria 1741
141 Ga0373943_0008515 3300035170 Bacteria 4600
142 Ga0373955_0002556 3300035172 Bacteria 7965
143 Ga0373933_0000036 3300035724 Bacteria 81168
144 Ga0373947_0020961 3300035725 Bacteria 3781
145 Ga0373937_0000001 3300036401 Bacteria 478903
146 Ga0316582_0046484 3300036647 Bacteria 2737
147 Ga0373925_0000181 3300037068 Bacteria 69133
148 Ga0395900_0017345 3300037418 Bacteria 7351
149 Ga0395905_0007379 3300037471 Bacteria 10937
150 Ga0400490_12652 3300038726 Bacteria 6305
151 Ga0400490_12886 3300038726 Bacteria 24095
152 Ga0400491_05430 3300038727 Bacteria 3019
153 Ga0400483_027546 3300039062 Bacteria 5731
154 Ga0400483_217905 3300039062 Bacteria 3791
155 Ga0400489_47797 3300039093 Bacteria 4670
156 Ga0436365_0114034 3300039437 Bacteria 7728
157 Ga0439439_0003966 3300041406 Bacteria 3299
158 Ga0439449_0000901 3300042007 Bacteria 11587
159 Ga0439457_016233 3300042014 Bacteria 1660
160 Ga0439462_0003041 3300042015 Bacteria 3982
161 Ga0451577_0064950 3300042876 Bacteria 3254
162 Ga0466972_0002840 3300044658 Bacteria 8573
163 Ga0466965_0000574 3300044683 Bacteria 13322
164 Ga0453684_0000221 3300044712 Bacteria 249908
165 Ga0466960_0000627 3300044901 Bacteria 12158
166 Ga0451576_0000453 3300045051 Bacteria 93077
167 Ga0451576_0030415 3300045051 Bacteria 5771
168 Ga0451576_0057549 3300045051 Unclassified 4064
169 Ga0495629_0000007 3300046459 Bacteria 358693
170 Ga0495651_0005173 3300046462 Bacteria 9951
171 Ga0495653_0091349 3300046463 Bacteria 2226
172 Ga0495639_0000063 3300046475 Bacteria 48365
173 Ga0495594_0044253 3300046499 Bacteria 2442
174 Ga0495628_0145377 3300046516 Bacteria 1808
175 Ga0495630_0000003 3300046517 Bacteria 524289
176 Ga0495666_0000003 3300046526 Bacteria 124168
177 Ga0495652_0035286 3300046529 Bacteria 4354
178 Ga0495640_0013460 3300046533 Bacteria 6215
179 Ga0495586_0000087 3300046535 Bacteria 57354
180 Ga0495587_0000116 3300046536 Bacteria 60612
181 Ga0495622_0001620 3300046557 Bacteria 11107
182 Ga0495667_0004619 3300046559 Bacteria 9311
183 Ga0495635_0001557 3300046663 Bacteria 15385
184 Ga0495658_0006113 3300046683 Bacteria 5912
185 Ga0495600_0010693 3300046809 Bacteria 5703
186 Ga0495581_0002638 3300047315 Bacteria 10205
187 Ga0495676_0013566 3300047321 Bacteria 7317
188 Ga0495680_0000938 3300047322 Bacteria 32348
189 Ga0495680_0162555 3300047322 Bacteria 1620
190 Ga0495675_0000319 3300047444 Bacteria 34255
191 Ga0495684_0009462 3300047471 Bacteria 7520
192 Ga0495684_0015764 3300047471 Bacteria 5815
193 Ga0495602_0000237 3300048088 Bacteria 51444
194 Ga0495602_0104500 3300048088 Bacteria 2317
195 Ga0496112_0045863 3300048915 Bacteria 4285
196 Ga0501308_000544 3300049128 Bacteria 2510
197 Ga0501047_0100709 3300049581 Bacteria 2769
198 Ga0501070_0047089 3300049586 Bacteria 3585
199 Ga0501072_0030695 3300049588 Bacteria 4205
200 Ga0501075_0024447 3300049591 Bacteria 4430
201 Ga0501076_0009848 3300049592 Bacteria 7065
202 Ga0501257_000820 3300049686 Bacteria 6219
203 Ga0501079_0026760 3300049741 Bacteria 4422
204 Ga0501080_0067476 3300049742 Bacteria 3327
205 Ga0501081_0063801 3300049743 Bacteria 2557
206 Ga0501035_0148047 3300049822 Bacteria 2039
207 Ga0501045_0025807 3300049824 Bacteria 4225
208 nmdc:mga05p37_1082_c1 3300050507 Bacteria 31274
209 nmdc:mga0qj67_34043_c1 3300050509 Bacteria 3978
210 nmdc:mga06r32_41617_c1 3300050510 Bacteria 4366
211 nmdc:mga08y16_26178_c1 3300050511 Bacteria 6152
212 nmdc:mga08x19_1801_c1 3300050514 Bacteria 13164
213 nmdc:mga0a205_24334_c1 3300050515 Bacteria 5757
214 Ga0495619_0058805 3300053085 Bacteria 2553
215 Ga0500566_0012376 3300053094 Bacteria 5025
216 Ga0501084_0034683 3300054114 Bacteria 4219
217 Ga0501084_0077575 3300054114 Bacteria 2785
218 Ga0501082_0010146 3300060353 Bacteria 8112
219 2860339458 2860339153 Bacteria 6846989
220 Ga0070706_100003987
221 Ga0065704_10111895
222 Ga0070670_100044853
223 Ga0070680_100017781
224 Ga0068868_100097520
225 Ga0070660_100022319
226 Ga0070660_100091429
227 Ga0070689_100086916
228 Ga0070692_10002477
229 Ga0070669_100019421
230 Ga0070675_100020712
231 Ga0070703_10000095
232 Ga0070705_100007973
233 Ga0070705_100034416
234 Ga0070700_100030193
235 Ga0070694_100000018
236 Ga0070694_100019111
237 Ga0070694_100058844
238 Ga0070708_100000536
239 Ga0068867_100009070
240 Ga0070706_100000108
241 Ga0070706_100007534
242 Ga0070707_100047348
243 Ga0070698_100070600
244 Ga0070699_100000015
245 Ga0070699_100006407
246 Ga0070679_100002458
247 Ga0070679_100012628
248 Ga0070697_100000032
249 Ga0070697_100043623
250 Ga0070697_100046469
251 Ga0070696_100010566
252 Ga0070665_100043205
253 Ga0068854_100027987
254 Ga0068863_100098101
255 Ga0081539_10000103
256 Ga0081539_10009826
257 Ga0081539_10018840
258 Ga0081539_10060302
259 Ga0075428_100012945
260 Ga0075428_100058222
261 Ga0075428_100255925
262 Ga0075430_100046797
263 Ga0075435_100189561
264 Ga0099794_10041099
265 Ga0105240_10008754
266 Ga0105240_10050784
267 Ga0111539_10023375
268 Ga0111539_10153183
269 Ga0114129_10009506
270 Ga0114129_10083776
271 Ga0114129_10231131
272 Ga0105243_10087472
273 Ga0105241_10000025
274 Ga0157371_10035851
275 Ga0157371_10042915
276 Ga0157369_10031322
277 Ga0157369_10066020
278 Ga0157379_10171527
279 Ga0228598_1002111
280 Ga0207653_10000119
281 Ga0207705_10008149
282 Ga0207684_10000444
283 Ga0207684_10000493
284 Ga0207684_10000737
285 Ga0207654_10000492
286 Ga0207695_10044066
287 Ga0207695_10074352
288 Ga0207657_10029212
289 Ga0207657_10059789
290 Ga0207652_10006016
291 Ga0207646_10000547
292 Ga0207711_10216975
293 Ga0207661_10051655
294 Ga0207661_10074245
295 Ga0207667_10068048
296 Ga0207667_10112870
297 Ga0207678_10039146
298 Ga0207708_10039147
299 Ga0207641_10105400
300 Ga0207648_10049875
301 Ga0209974_10018652
302 Ga0268266_10026804
303 Ga0265337_1002491
304 Ga0265337_1006664
305 Ga0265326_10000673
306 Ga0265326_10005046
307 Ga0265319_1000618
308 Ga0265319_1000705
309 Ga0265319_1004921
310 Ga0265334_10012031
311 Ga0265318_10006123
312 Ga0265318_10007771
313 Ga0265323_10000273
314 Ga0265322_10000343
315 Ga0265322_10008336
316 Ga0265336_10000526
317 Ga0265338_10000250
318 Ga0265338_10000614
319 Ga0265338_10004885
320 Ga0265338_10009816
321 Ga0265338_10024865
322 Ga0265338_10026944
323 Ga0265338_10048841
324 Ga0265324_10000480
325 Ga0265324_10008671
326 Ga0265760_10000021
327 Ga0265330_10001125
328 Ga0265330_10053740
329 Ga0265332_10000265
330 Ga0265332_10005944
331 Ga0265332_10026911
332 Ga0265332_10031676
333 Ga0265320_10000681
334 Ga0265320_10024380
335 Ga0265325_10004791
336 Ga0265325_10012378
337 Ga0265325_10057054
338 Ga0265329_10000872
339 Ga0265340_10003546
340 Ga0265340_10013828
341 Ga0265340_10023981
342 Ga0265339_10000724
343 Ga0265331_10001458
344 Ga0265327_10007942
345 Ga0265316_10001057
346 Ga0265316_10036558
347 Ga0265316_10066559
348 Ga0307408_100051523
349 Ga0265313_10000880
350 Ga0265313_10019080
351 Ga0265314_10001400
352 Ga0265314_10003305
353 Ga0265314_10024416
354 Ga0265314_10027862
355 Ga0265342_10000887
356 Ga0265342_10002978
357 Ga0307411_10091702
358 Ga0316583_10002696
359 Ga0373956_0058603
360 Ga0373943_0008515
361 Ga0373955_0002556
362 Ga0373933_0000036
363 Ga0373947_0020961
364 Ga0373937_0000001
365 Ga0316582_0046484
366 Ga0373925_0000181
367 Ga0395900_0017345
368 Ga0395905_0007379
369 Ga0400490_12652
370 Ga0400490_12886
371 Ga0400491_05430
372 Ga0400483_027546
373 Ga0400483_217905
374 Ga0400489_47797
375 Ga0436365_0114034
376 Ga0439439_0003966
377 Ga0439449_0000901
378 Ga0439457_016233
379 Ga0439462_0003041
380 Ga0451577_0064950
381 Ga0466972_0002840
382 Ga0466965_0000574
383 Ga0453684_0000221
384 Ga0466960_0000627
385 Ga0451576_0000453
386 Ga0451576_0030415
387 Ga0451576_0057549
388 Ga0495629_0000007
389 Ga0495651_0005173
390 Ga0495653_0091349
391 Ga0495639_0000063
392 Ga0495594_0044253
393 Ga0495628_0145377
394 Ga0495630_0000003
395 Ga0495666_0000003
396 Ga0495652_0035286
397 Ga0495640_0013460
398 Ga0495586_0000087
399 Ga0495587_0000116
400 Ga0495622_0001620
401 Ga0495667_0004619
402 Ga0495635_0001557
403 Ga0495658_0006113
404 Ga0495600_0010693
405 Ga0495581_0002638
406 Ga0495676_0013566
407 Ga0495680_0000938
408 Ga0495680_0162555
409 Ga0495675_0000319
410 Ga0495684_0009462
411 Ga0495684_0015764
412 Ga0495602_0000237
413 Ga0495602_0104500
414 Ga0496112_0045863
415 Ga0501308_000544
416 Ga0501047_0100709
417 Ga0501070_0047089
418 Ga0501072_0030695
419 Ga0501075_0024447
420 Ga0501076_0009848
421 Ga0501257_000820
422 Ga0501079_0026760
423 Ga0501080_0067476
424 Ga0501081_0063801
425 Ga0501035_0148047
426 Ga0501045_0025807
427 nmdc:mga05p37_1082_c1
428 nmdc:mga0qj67_34043_c1
429 nmdc:mga06r32_41617_c1
430 nmdc:mga08y16_26178_c1
431 nmdc:mga08x19_1801_c1
432 nmdc:mga0a205_24334_c1
433 Ga0495619_0058805
434 Ga0500566_0012376
435 Ga0501084_0034683
436 Ga0501084_0077575
437 Ga0501082_0010146
438 2860339458

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00883

Peptidase_M17

Cytosol aminopeptidase family, catalytic domain

205

511

0.97

PF02789

Peptidase_M17_N

Cytosol aminopeptidase family, N-terminal domain

23

167

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lhk-assembly1.cif.gz_A bottromycin maturation enzyme botp in complex with mn 0.9479 14 486
5lhj-assembly1.cif.gz_A bottromycin maturation enzyme botp 0.9476 14 484
6ome-assembly1.cif.gz_A crystal structure of a probable cytosol aminopeptidase (leucine aminopeptidase, lap) from chlamydia trachomatis d/uw-3/cx 0.9461 2 485
5lhk-assembly1.cif.gz_A bottromycin maturation enzyme botp in complex with mn 0.9459 14 486
6ome-assembly1.cif.gz_A crystal structure of a probable cytosol aminopeptidase (leucine aminopeptidase, lap) from chlamydia trachomatis d/uw-3/cx 0.9404 2 485
ID Description Score Start End Superfamily
af_Q2FZV6_163_491_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9805 159 483 3.40.630.10
3h8gE02 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9735 164 486 3.40.630.10
6omeA02 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9724 159 484 3.40.630.10
af_Q9VSM6_230_544_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9702 171 483 3.40.630.10
af_A4I0E4_227_564_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9683 159 482 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A1F9P1B6-F1-model_v4 Cytosol aminopeptidase domain-containing protein 0.9883 201 481 GO:0005737
GO:0006508
GO:0030145
GO:0070006
AF-A0A7X5WKG0-F1-model_v4 deleted 0.9874 203 486
AF-A0A356V307-F1-model_v4 Leucyl aminopeptidase 0.9867 236 422 GO:0005737
GO:0006508
GO:0030145
GO:0070006
AF-A0A257T6M3-F1-model_v4 Leucyl aminopeptidase 0.9855 188 484 GO:0005737
GO:0006508
GO:0030145
GO:0070006
AF-A0A4Q2YSV2-F1-model_v4 Leucyl aminopeptidase 0.985 117 485 GO:0005737
GO:0006508
GO:0030145
GO:0070006

Map