F330777

General Info

Members Datasets Scaffolds Average Seq Length
219 135 438 111

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100276541|Ga0070713_1002765412
Length 131
Sequence LRILEVSFGGWVAFRSYVIDRITDRIEQYMDLLSARQKLVASNIANVDTPGYKTKDIDFQFEFMSLTQGASPNVVEAPGLTVKNDGNNVSMDREARLLAENALRFNLASNLMKAQLKMVASAIQGGGGNSG

Samples

Sample ID Description Type Environment
1 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
17 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
63 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
64 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
66 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
67 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
68 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
69 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
70 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
71 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
72 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
73 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
74 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
75 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
89 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
90 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
91 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
92 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
95 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
96 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
99 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
100 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
101 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
102 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
105 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.46
Rhizosphere 94.98
Stem 0
Stem Tuber 0
Unclassified 27.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070713_100276541 3300005436 Bacteria 1539
2 Ga0070683_100000004 3300005329 Bacteria 373231
3 Ga0070683_100074652 3300005329 Bacteria 3167
4 Ga0070666_10406404 3300005335 Bacteria 979
5 Ga0070680_100024235 3300005336 Bacteria 4844
6 Ga0070660_100977099 3300005339 Bacteria 715
7 Ga0070689_100422959 3300005340 Unclassified 1129
8 Ga0070675_100056218 3300005354 Unclassified 3242
9 Ga0070713_100535872 3300005436 Unclassified 1107
10 Ga0070713_101346714 3300005436 Bacteria 692
11 Ga0070681_10016037 3300005458 Bacteria 7467
12 Ga0070681_10235710 3300005458 Bacteria 1744
13 Ga0070679_100047914 3300005530 Bacteria 4258
14 Ga0070679_100369083 3300005530 Bacteria 1382
15 Ga0070679_100447057 3300005530 Unclassified 1237
16 Ga0070684_100000009 3300005535 Bacteria 209881
17 Ga0070684_100185414 3300005535 Unclassified 1892
18 Ga0070684_100882076 3300005535 Unclassified 838
19 Ga0068853_100307064 3300005539 Unclassified 1468
20 Ga0068855_100098147 3300005563 Unclassified 3375
21 Ga0068855_100266949 3300005563 Bacteria 1904
22 Ga0068855_101079265 3300005563 Bacteria 840
23 Ga0081539_10042379 3300005985 Bacteria 2652
24 Ga0070717_11562926 3300006028 Unclassified 598
25 Ga0097621_100731260 3300006237 Unclassified 913
26 Ga0097621_101338181 3300006237 Unclassified 677
27 Ga0075433_10904809 3300006852 Bacteria 770
28 Ga0068865_102044657 3300006881 Unclassified 520
29 Ga0105240_10007725 3300009093 Bacteria 15558
30 Ga0105240_10050847 3300009093 Bacteria 5221
31 Ga0105245_10179280 3300009098 Bacteria 2023
32 Ga0105245_10994120 3300009098 Bacteria 883
33 Ga0105247_10365741 3300009101 Bacteria 1018
34 Ga0114129_10201407 3300009147 Unclassified 2696
35 Ga0114129_10239664 3300009147 Bacteria 2438
36 Ga0114129_10824941 3300009147 Bacteria 1181
37 Ga0105243_12040850 3300009148 Bacteria 608
38 Ga0105241_10219540 3300009174 Bacteria 1597
39 Ga0105242_10653942 3300009176 Bacteria 1022
40 Ga0105242_11365895 3300009176 Bacteria 735
41 Ga0105242_12128005 3300009176 Unclassified 605
42 Ga0105248_10043310 3300009177 Bacteria 5047
43 Ga0105248_11329908 3300009177 Bacteria 813
44 Ga0105248_12991448 3300009177 Bacteria 538
45 Ga0105237_10072120 3300009545 Bacteria 3447
46 Ga0105237_11823008 3300009545 Unclassified 616
47 Ga0105238_10040516 3300009551 Unclassified 4719
48 Ga0105238_10081983 3300009551 Bacteria 3216
49 Ga0105238_10322115 3300009551 Bacteria 1532
50 Ga0105239_10071478 3300010375 Bacteria 3812
51 Ga0157370_10235390 3300013104 Bacteria 1694
52 Ga0157370_10477758 3300013104 Bacteria 1145
53 Ga0157370_11734894 3300013104 Unclassified 560
54 Ga0157369_10002261 3300013105 Bacteria 23149
55 Ga0157369_10076752 3300013105 Bacteria 3582
56 Ga0157369_10688248 3300013105 Unclassified 1053
57 Ga0157369_11467058 3300013105 Bacteria 694
58 Ga0157374_10292053 3300013296 Unclassified 1611
59 Ga0157374_12098549 3300013296 Bacteria 592
60 Ga0157378_10396341 3300013297 Unclassified 1359
61 Ga0157372_10064289 3300013307 Unclassified 4117
62 Ga0157372_10170951 3300013307 Bacteria 2514
63 Ga0157372_11006897 3300013307 Unclassified 965
64 Ga0157372_12205915 3300013307 Unclassified 633
65 Ga0157375_13553775 3300013308 Bacteria 519
66 Ga0163163_10034969 3300014325 Bacteria 4871
67 Ga0163163_10388055 3300014325 Bacteria 1454
68 Ga0163163_10431783 3300014325 Unclassified 1376
69 Ga0163163_12772719 3300014325 Unclassified 547
70 Ga0157379_10112581 3300014968 Bacteria 2446
71 Ga0157376_10206690 3300014969 Bacteria 1810
72 Ga0157376_10277039 3300014969 Bacteria 1578
73 Ga0157376_12224318 3300014969 Unclassified 587
74 Ga0213875_10014419 3300021388 Unclassified 3856
75 Ga0213875_10094070 3300021388 Unclassified 1398
76 Ga0213875_10581170 3300021388 Bacteria 541
77 Ga0207680_10238431 3300025903 Bacteria 1252
78 Ga0207699_10333225 3300025906 Bacteria 1067
79 Ga0207705_10038187 3300025909 Bacteria 3437
80 Ga0207707_10292491 3300025912 Bacteria 1409
81 Ga0207695_10021933 3300025913 Bacteria 7268
82 Ga0207695_10099190 3300025913 Bacteria 2911
83 Ga0207695_11051897 3300025913 Bacteria 694
84 Ga0207671_10180208 3300025914 Unclassified 1644
85 Ga0207671_10312386 3300025914 Unclassified 1243
86 Ga0207652_10307476 3300025921 Bacteria 1431
87 Ga0207652_10997863 3300025921 Unclassified 736
88 Ga0207694_10189696 3300025924 Unclassified 1669
89 Ga0207694_10890410 3300025924 Bacteria 752
90 Ga0207659_11286356 3300025926 Unclassified 628
91 Ga0207687_10480934 3300025927 Bacteria 1034
92 Ga0207670_10744558 3300025936 Unclassified 814
93 Ga0207711_10072738 3300025941 Bacteria 2987
94 Ga0207661_10000017 3300025944 Bacteria 289163
95 Ga0207661_10453504 3300025944 Bacteria 1168
96 Ga0207667_10115886 3300025949 Unclassified 2762
97 Ga0207703_10879389 3300026035 Bacteria 857
98 Ga0265338_10177289 3300028800 Bacteria 1628
99 Ga0265325_10009741 3300031241 Bacteria 5599
100 Ga0265316_10114735 3300031344 Bacteria 2037
101 Ga0265316_10967461 3300031344 Bacteria 593
102 Ga0265313_10112949 3300031595 Unclassified 1193
103 Ga0265314_10029076 3300031711 Bacteria 4112
104 Ga0265342_10086605 3300031712 Unclassified 1801
105 Ga0307410_10758966 3300031852 Bacteria 822
106 Ga0307412_11288686 3300031911 Bacteria 657
107 Ga0373959_0202216 3300034820 Unclassified 525
108 Ga0373926_0121330 3300035083 Unclassified 986
109 Ga0373923_0385536 3300035111 Bacteria 673
110 Ga0373953_0118526 3300035117 Unclassified 1123
111 Ga0373953_0265221 3300035117 Bacteria 747
112 Ga0373954_0009384 3300035118 Bacteria 4304
113 Ga0373954_0064906 3300035118 Bacteria 1727
114 Ga0373956_0029118 3300035119 Bacteria 2407
115 Ga0373957_0337897 3300035120 Unclassified 642
116 Ga0373943_0588877 3300035170 Bacteria 654
117 Ga0373955_0047209 3300035172 Bacteria 2331
118 Ga0373924_0380433 3300035410 Bacteria 630
119 Ga0373935_0028141 3300035692 Bacteria 3474
120 Ga0373935_0271209 3300035692 Bacteria 1192
121 Ga0373927_0016403 3300035695 Bacteria 4885
122 Ga0373927_0025332 3300035695 Bacteria 3877
123 Ga0373927_0039322 3300035695 Unclassified 3070
124 Ga0373927_0200538 3300035695 Bacteria 1310
125 Ga0373933_0251572 3300035724 Bacteria 1138
126 Ga0373933_0734606 3300035724 Bacteria 649
127 Ga0373947_0002542 3300035725 Bacteria 10964
128 Ga0373947_0081390 3300035725 Bacteria 2005
129 Ga0373947_0587685 3300035725 Bacteria 759
130 Ga0373947_0691583 3300035725 Bacteria 696
131 Ga0373937_0006688 3300036401 Bacteria 9949
132 Ga0373937_0024169 3300036401 Bacteria 5478
133 Ga0373937_0961104 3300036401 Bacteria 803
134 Ga0373925_0000139 3300037068 Bacteria 77722
135 Ga0373925_0009761 3300037068 Bacteria 6972
136 Ga0373925_0038761 3300037068 Bacteria 3525
137 Ga0373925_0963290 3300037068 Bacteria 703
138 Ga0436364_0879357 3300037853 Bacteria 8202
139 Ga0436364_1033516 3300037853 Bacteria 1008
140 Ga0436364_1037425 3300037853 Bacteria 575
141 Ga0436364_1551879 3300037853 Bacteria 1705
142 Ga0436364_1563472 3300037853 Unclassified 2725
143 Ga0436365_0045967 3300039437 Bacteria 1011
144 Ga0436365_1082047 3300039437 Bacteria 5144
145 Ga0436360_0609292 3300039438 Bacteria 603
146 Ga0436360_1212400 3300039438 Unclassified 709
147 Ga0436361_1122779 3300039447 Bacteria 1012
148 Ga0451577_0913561 3300042876 Bacteria 790
149 Ga0466966_0087949 3300044684 Bacteria 1931
150 Ga0466961_0181692 3300044693 Bacteria 1306
151 Ga0453684_0361822 3300044712 Bacteria 1633
152 Ga0453684_0505908 3300044712 Unclassified 1337
153 Ga0466957_0617940 3300044842 Unclassified 760
154 Ga0451576_0279988 3300045051 Bacteria 1744
155 Ga0451576_0838511 3300045051 Bacteria 965
156 Ga0451576_1380060 3300045051 Unclassified 733
157 Ga0495580_0006359 3300046472 Bacteria 9638
158 Ga0495580_0079034 3300046472 Bacteria 2294
159 Ga0495580_0374623 3300046472 Bacteria 962
160 Ga0495580_0469397 3300046472 Unclassified 843
161 Ga0495580_0608445 3300046472 Bacteria 722
162 Ga0495580_0669568 3300046472 Bacteria 681
163 Ga0495664_0267608 3300046477 Bacteria 1033
164 Ga0495608_0111265 3300046511 Bacteria 1761
165 Ga0495608_0535516 3300046511 Bacteria 707
166 Ga0495628_0638749 3300046516 Bacteria 757
167 Ga0495630_0059694 3300046517 Bacteria 2862
168 Ga0495652_0813997 3300046529 Unclassified 621
169 Ga0495665_0220305 3300046531 Bacteria 981
170 Ga0495665_0516977 3300046531 Bacteria 601
171 Ga0495586_0637408 3300046535 Unclassified 616
172 Ga0495587_0177449 3300046536 Unclassified 1209
173 Ga0495645_0483225 3300046543 Bacteria 777
174 Ga0495667_0042166 3300046559 Bacteria 3026
175 Ga0495667_0648813 3300046559 Unclassified 656
176 Ga0495634_0488535 3300046642 Bacteria 723
177 Ga0495657_0636591 3300046675 Unclassified 616
178 Ga0495604_0086115 3300047317 Bacteria 2344
179 Ga0495636_0298176 3300047318 Unclassified 754
180 Ga0495674_0052653 3300047319 Bacteria 3581
181 Ga0495674_0098137 3300047319 Bacteria 2495
182 Ga0495674_0398105 3300047319 Bacteria 1112
183 Ga0495674_1475831 3300047319 Bacteria 504
184 Ga0495675_0098378 3300047444 Bacteria 1833
185 Ga0495684_0052328 3300047471 Bacteria 3116
186 Ga0495684_0296649 3300047471 Unclassified 1162
187 Ga0495684_0757300 3300047471 Bacteria 638
188 Ga0495602_0977890 3300048088 Unclassified 559
189 Ga0496112_1926265 3300048915 Unclassified 502
190 Ga0501032_0001793 3300049569 Bacteria 16954
191 Ga0501033_0008413 3300049570 Bacteria 7989
192 Ga0501034_0112218 3300049571 Bacteria 2716
193 Ga0501036_0002426 3300049572 Bacteria 14597
194 Ga0501038_0018737 3300049574 Bacteria 6249
195 Ga0501039_0018757 3300049575 Bacteria 5310
196 Ga0501042_0464192 3300049578 Unclassified 918
197 Ga0501043_0025053 3300049579 Bacteria 4680
198 Ga0501046_0000835 3300049580 Bacteria 30000
199 Ga0501047_0056132 3300049581 Bacteria 3807
200 Ga0501047_0855983 3300049581 Unclassified 723
201 Ga0501048_0076121 3300049582 Bacteria 2368
202 Ga0501068_0000890 3300049584 Bacteria 15599
203 Ga0501069_0145907 3300049585 Bacteria 1358
204 Ga0501072_0001144 3300049588 Bacteria 19710
205 Ga0501073_0005630 3300049589 Bacteria 9372
206 Ga0501074_0198107 3300049590 Bacteria 1431
207 Ga0501076_0020076 3300049592 Bacteria 5111
208 Ga0501077_0028848 3300049593 Bacteria 3527
209 Ga0501079_0005406 3300049741 Bacteria 9513
210 Ga0501080_0000129 3300049742 Bacteria 53483
211 Ga0501081_0882052 3300049743 Unclassified 674
212 Ga0501035_1258066 3300049822 Bacteria 572
213 Ga0501044_0043220 3300049823 Bacteria 4682
214 Ga0501045_0289339 3300049824 Unclassified 1219
215 nmdc:mga05p37_1210789_c1 3300050507 Bacteria 779
216 nmdc:mga05p37_210912_c1 3300050507 Bacteria 1778
217 nmdc:mga0a205_1007878_c1 3300050515 Bacteria 680
218 Ga0501084_0000429 3300054114 Bacteria 32256
219 Ga0501082_0001323 3300060353 Bacteria 21689
220 Ga0070713_100276541
221 Ga0070683_100000004
222 Ga0070683_100074652
223 Ga0070666_10406404
224 Ga0070680_100024235
225 Ga0070660_100977099
226 Ga0070689_100422959
227 Ga0070675_100056218
228 Ga0070713_100535872
229 Ga0070713_101346714
230 Ga0070681_10016037
231 Ga0070681_10235710
232 Ga0070679_100047914
233 Ga0070679_100369083
234 Ga0070679_100447057
235 Ga0070684_100000009
236 Ga0070684_100185414
237 Ga0070684_100882076
238 Ga0068853_100307064
239 Ga0068855_100098147
240 Ga0068855_100266949
241 Ga0068855_101079265
242 Ga0081539_10042379
243 Ga0070717_11562926
244 Ga0097621_100731260
245 Ga0097621_101338181
246 Ga0075433_10904809
247 Ga0068865_102044657
248 Ga0105240_10007725
249 Ga0105240_10050847
250 Ga0105245_10179280
251 Ga0105245_10994120
252 Ga0105247_10365741
253 Ga0114129_10201407
254 Ga0114129_10239664
255 Ga0114129_10824941
256 Ga0105243_12040850
257 Ga0105241_10219540
258 Ga0105242_10653942
259 Ga0105242_11365895
260 Ga0105242_12128005
261 Ga0105248_10043310
262 Ga0105248_11329908
263 Ga0105248_12991448
264 Ga0105237_10072120
265 Ga0105237_11823008
266 Ga0105238_10040516
267 Ga0105238_10081983
268 Ga0105238_10322115
269 Ga0105239_10071478
270 Ga0157370_10235390
271 Ga0157370_10477758
272 Ga0157370_11734894
273 Ga0157369_10002261
274 Ga0157369_10076752
275 Ga0157369_10688248
276 Ga0157369_11467058
277 Ga0157374_10292053
278 Ga0157374_12098549
279 Ga0157378_10396341
280 Ga0157372_10064289
281 Ga0157372_10170951
282 Ga0157372_11006897
283 Ga0157372_12205915
284 Ga0157375_13553775
285 Ga0163163_10034969
286 Ga0163163_10388055
287 Ga0163163_10431783
288 Ga0163163_12772719
289 Ga0157379_10112581
290 Ga0157376_10206690
291 Ga0157376_10277039
292 Ga0157376_12224318
293 Ga0213875_10014419
294 Ga0213875_10094070
295 Ga0213875_10581170
296 Ga0207680_10238431
297 Ga0207699_10333225
298 Ga0207705_10038187
299 Ga0207707_10292491
300 Ga0207695_10021933
301 Ga0207695_10099190
302 Ga0207695_11051897
303 Ga0207671_10180208
304 Ga0207671_10312386
305 Ga0207652_10307476
306 Ga0207652_10997863
307 Ga0207694_10189696
308 Ga0207694_10890410
309 Ga0207659_11286356
310 Ga0207687_10480934
311 Ga0207670_10744558
312 Ga0207711_10072738
313 Ga0207661_10000017
314 Ga0207661_10453504
315 Ga0207667_10115886
316 Ga0207703_10879389
317 Ga0265338_10177289
318 Ga0265325_10009741
319 Ga0265316_10114735
320 Ga0265316_10967461
321 Ga0265313_10112949
322 Ga0265314_10029076
323 Ga0265342_10086605
324 Ga0307410_10758966
325 Ga0307412_11288686
326 Ga0373959_0202216
327 Ga0373926_0121330
328 Ga0373923_0385536
329 Ga0373953_0118526
330 Ga0373953_0265221
331 Ga0373954_0009384
332 Ga0373954_0064906
333 Ga0373956_0029118
334 Ga0373957_0337897
335 Ga0373943_0588877
336 Ga0373955_0047209
337 Ga0373924_0380433
338 Ga0373935_0028141
339 Ga0373935_0271209
340 Ga0373927_0016403
341 Ga0373927_0025332
342 Ga0373927_0039322
343 Ga0373927_0200538
344 Ga0373933_0251572
345 Ga0373933_0734606
346 Ga0373947_0002542
347 Ga0373947_0081390
348 Ga0373947_0587685
349 Ga0373947_0691583
350 Ga0373937_0006688
351 Ga0373937_0024169
352 Ga0373937_0961104
353 Ga0373925_0000139
354 Ga0373925_0009761
355 Ga0373925_0038761
356 Ga0373925_0963290
357 Ga0436364_0879357
358 Ga0436364_1033516
359 Ga0436364_1037425
360 Ga0436364_1551879
361 Ga0436364_1563472
362 Ga0436365_0045967
363 Ga0436365_1082047
364 Ga0436360_0609292
365 Ga0436360_1212400
366 Ga0436361_1122779
367 Ga0451577_0913561
368 Ga0466966_0087949
369 Ga0466961_0181692
370 Ga0453684_0361822
371 Ga0453684_0505908
372 Ga0466957_0617940
373 Ga0451576_0279988
374 Ga0451576_0838511
375 Ga0451576_1380060
376 Ga0495580_0006359
377 Ga0495580_0079034
378 Ga0495580_0374623
379 Ga0495580_0469397
380 Ga0495580_0608445
381 Ga0495580_0669568
382 Ga0495664_0267608
383 Ga0495608_0111265
384 Ga0495608_0535516
385 Ga0495628_0638749
386 Ga0495630_0059694
387 Ga0495652_0813997
388 Ga0495665_0220305
389 Ga0495665_0516977
390 Ga0495586_0637408
391 Ga0495587_0177449
392 Ga0495645_0483225
393 Ga0495667_0042166
394 Ga0495667_0648813
395 Ga0495634_0488535
396 Ga0495657_0636591
397 Ga0495604_0086115
398 Ga0495636_0298176
399 Ga0495674_0052653
400 Ga0495674_0098137
401 Ga0495674_0398105
402 Ga0495674_1475831
403 Ga0495675_0098378
404 Ga0495684_0052328
405 Ga0495684_0296649
406 Ga0495684_0757300
407 Ga0495602_0977890
408 Ga0496112_1926265
409 Ga0501032_0001793
410 Ga0501033_0008413
411 Ga0501034_0112218
412 Ga0501036_0002426
413 Ga0501038_0018737
414 Ga0501039_0018757
415 Ga0501042_0464192
416 Ga0501043_0025053
417 Ga0501046_0000835
418 Ga0501047_0056132
419 Ga0501047_0855983
420 Ga0501048_0076121
421 Ga0501068_0000890
422 Ga0501069_0145907
423 Ga0501072_0001144
424 Ga0501073_0005630
425 Ga0501074_0198107
426 Ga0501076_0020076
427 Ga0501077_0028848
428 Ga0501079_0005406
429 Ga0501080_0000129
430 Ga0501081_0882052
431 Ga0501035_1258066
432 Ga0501044_0043220
433 Ga0501045_0289339
434 nmdc:mga05p37_1210789_c1
435 nmdc:mga05p37_210912_c1
436 nmdc:mga0a205_1007878_c1
437 Ga0501084_0000429
438 Ga0501082_0001323

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00460

Flg_bb_rod

Flagella basal body rod protein

30

53

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nvg-assembly1.cif.gz_l2 salmonella flagellar basal body refined in c1 map 0.956 2 28
7nvg-assembly1.cif.gz_q2 salmonella flagellar basal body refined in c1 map 0.9547 2 29
7cgo-assembly1.cif.gz_R cryo-em structure of the flagellar motor-hook complex from salmonella 0.9476 2 29
7cbm-assembly1.cif.gz_U cryo-em structure of the flagellar distal rod with partial hook from salmonella 0.9447 2 29
6k9q-assembly1.cif.gz_Q structure of the native supercoiled hook as a universal joint 0.9413 2 29
ID Description Score Start End Superfamily
af_Q4D2G5_5_104_1.10.287.370 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.6589 4 86 1.10.287.370
af_A4I936_5_105_1.10.287.370 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.605 4 80 1.10.287.370
af_O94307_9_151_1.10.287.370 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.5539 4 91 1.10.287.370
af_Q3EB59_41_196_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.516 3 84 1.20.140.150
af_Q84JS9_9_147_1.10.287.370 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.5152 2 84 1.10.287.370
ID Description Score Start End GO Terms
AF-Q02C67-F1-model_v4 Flagellar basal-body rod protein FlgB 0.9713 1 98
AF-A0A2N9MR37-F1-model_v4 Flagellar basal body rod protein FlgB 0.9681 1 98 GO:0030694
GO:0071978
AF-Q02C67-F1-model_v4 Flagellar basal-body rod protein FlgB 0.9618 1 98
AF-A0A7Y8I094-F1-model_v4 Flagellar basal body rod protein FlgB 0.9612 2 97 GO:0030694
GO:0071973
AF-A0A142X3E7-F1-model_v4 Flagellar basal body rod protein FlgB 0.9603 4 93 GO:0030694
GO:0071973

Map