F330453

General Info

Members Datasets Scaffolds Average Seq Length
218 159 436 466

Family's Representative Sequence

Representative Sequence 3300049592|Ga0501076_0180819|Ga0501076_0180819_62_1567
Length 501
Sequence VTTAAPRLRVREVRLGERDVHLRLPFRFGVVTLTRAHQAFVRARVALEDGREGWGAAAEILAPKWFDKDPALSDEDNAEQLRESLRVAAGLYTEGRVPRTAFRLFADGHHLQLAECGRQGLNPLVASFGPALLDRAVLDALCRLHGLSFSEAVRANLPGLAPAQLLPEFAGFDVDAFLAGLRPAGALHARHTVGLVDPLTAADQPAGARLNDGLPETLEEVVAAYGHTYFKLKVGGDVAADVARLAAIAAVLDRSPVPYHVTLDGNEQYESVEAVLELWRALSDAPTLRRLVDAVLFVEQPIARAAALREDVGALGAVRPVIIDESDADLDAFVRARARGYRGVSSKACKGLYKSLINAGRCARWNREAGTGAFFMSGEDLTTQPGLALQQDLALVSVLGLGHVERNGHHYVRGLAALPPGEQSAWLAAHPDLYVRDGDLVRVRIADGRLAVGSLERAGFAAGAQPDWSSMREVAVITAPERPGRMPGRGNRPGSPRPIPD

Samples

Sample ID Description Type Environment
1 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
4 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
8 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
9 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
20 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
65 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
66 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
67 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
68 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
69 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
111 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
114 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
143 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
144 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
145 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
146 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
147 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
148 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
149 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
150 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
151 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
154 2643221658 Variovorax sp. Root411 Isolate Unclassified
155 2643221683 Variovorax sp. Root473 Isolate Unclassified
156 2842733646 Variovorax sp. R-72446 Isolate Unclassified
157 2842747753 Variovorax sp. R-72060 Isolate Unclassified
158 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
159 2904456579 Variovorax sp. 2002 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.79
Metatranscriptomes 0.46
Isolates 2.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 29.36
Nodule 0.92
Rhizoplane 0
Rhizosphere 60.09
Stem 0
Stem Tuber 0
Unclassified 0.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501076_0180819 3300049592 Bacteria 1719
2 JGI24739J22299_10006205 3300001989 Bacteria 4515
3 JGI25155J39150_1000074 3300002704 Bacteria 62438
4 JGI25156J39149_1000002 3300002705 Bacteria 343501
5 JGI25154J39366_1000010 3300002738 Bacteria 297985
6 JGI25157J39369_1000001 3300002741 Bacteria 363277
7 JGI25159J45721_1002826 3300002987 Bacteria 6386
8 JGI25151J46595_10003546 3300003187 Bacteria 8575
9 JGI25151J46595_10005506 3300003187 Bacteria 6525
10 Ga0006562J51391_1098228 3300003578 Bacteria 2369
11 Ga0055526_1003829 3300003771 Bacteria 9352
12 Ga0055526_1003886 3300003771 Bacteria 9263
13 Ga0055537_1000259 3300003773 Bacteria 38671
14 Ga0055537_1000545 3300003773 Bacteria 21604
15 Ga0055524_1000156 3300003775 Bacteria 79669
16 Ga0055536_1000270 3300003781 Bacteria 39711
17 Ga0055536_1003134 3300003781 Bacteria 8977
18 Ga0055534_1000401 3300003784 Bacteria 26682
19 Ga0055534_1001520 3300003784 Bacteria 9064
20 Ga0055528_1002369 3300003790 Bacteria 10180
21 Ga0055528_1004813 3300003790 Bacteria 6423
22 Ga0055530_10000408 3300003791 Bacteria 38218
23 Ga0055540_1000033 3300003792 Bacteria 172048
24 Ga0055540_1014623 3300003792 Bacteria 2328
25 Ga0055531_10000273 3300003794 Bacteria 53570
26 Ga0065165_1010360 3300005262 Bacteria 4043
27 Ga0070676_10075860 3300005328 Bacteria 2028
28 Ga0070670_100071898 3300005331 Bacteria 2970
29 Ga0070680_100022089 3300005336 Bacteria 5062
30 Ga0070669_100014876 3300005353 Bacteria 5544
31 Ga0070675_100035177 3300005354 Bacteria 4069
32 Ga0070671_100087124 3300005355 Bacteria 2613
33 Ga0070673_100067528 3300005364 Bacteria 2859
34 Ga0070713_100158134 3300005436 Bacteria 2021
35 Ga0070694_100039777 3300005444 Bacteria 3133
36 Ga0070694_100040738 3300005444 Bacteria 3097
37 Ga0070694_100136397 3300005444 Bacteria 1778
38 Ga0070678_100027800 3300005456 Bacteria 3846
39 Ga0070662_100129195 3300005457 Bacteria 1946
40 Ga0068867_100069803 3300005459 Bacteria 2625
41 Ga0070699_100020104 3300005518 Bacteria 5754
42 Ga0070697_100016796 3300005536 Bacteria 5757
43 Ga0070695_100051423 3300005545 Bacteria 2644
44 Ga0070695_100106619 3300005545 Bacteria 1895
45 Ga0070696_100108040 3300005546 Bacteria 2001
46 Ga0070665_100039555 3300005548 Bacteria 4741
47 Ga0070665_100053571 3300005548 Bacteria 4046
48 Ga0070704_100009048 3300005549 Bacteria 6006
49 Ga0070704_100025852 3300005549 Bacteria 3870
50 Ga0070704_100048660 3300005549 Bacteria 2969
51 Ga0068855_100057349 3300005563 Bacteria 4565
52 Ga0070664_100256592 3300005564 Bacteria 1572
53 Ga0068857_100100818 3300005577 Bacteria 2590
54 Ga0068857_100229259 3300005577 Bacteria 1698
55 Ga0068854_100182969 3300005578 Bacteria 1638
56 Ga0068856_100168971 3300005614 Bacteria 2199
57 Ga0068860_100197567 3300005843 Bacteria 1948
58 Ga0075364_10048967 3300006051 Bacteria 2754
59 Ga0075432_10023747 3300006058 Bacteria 2101
60 Ga0075370_10009722 3300006353 Bacteria 5006
61 Ga0075370_10014236 3300006353 Bacteria 4239
62 Ga0075430_100001562 3300006846 Bacteria 18742
63 Ga0075430_100035843 3300006846 Bacteria 4207
64 Ga0075431_100007438 3300006847 Bacteria 10908
65 Ga0075431_100133792 3300006847 Bacteria 2556
66 Ga0075434_100042450 3300006871 Bacteria 4508
67 Ga0075429_100057400 3300006880 Bacteria 3389
68 Ga0075429_100214824 3300006880 Bacteria 1685
69 Ga0075436_100006655 3300006914 Bacteria 7915
70 Ga0099826_10003523 3300006948 Bacteria 10657
71 Ga0111539_10097573 3300009094 Bacteria 3452
72 Ga0111539_10288506 3300009094 Bacteria 1910
73 Ga0114129_10016945 3300009147 Bacteria 10374
74 Ga0114129_10055762 3300009147 Bacteria 5538
75 Ga0105243_10072692 3300009148 Bacteria 2784
76 Ga0105242_10324648 3300009176 Bacteria 1413
77 Ga0105249_10100498 3300009553 Bacteria 2719
78 Ga0105239_10036926 3300010375 Bacteria 5360
79 Ga0157369_10045110 3300013105 Bacteria 4796
80 Ga0163162_10335861 3300013306 Unclassified 1643
81 Ga0163163_10188466 3300014325 Bacteria 2111
82 Ga0157377_10065104 3300014745 Bacteria 2093
83 Ga0163161_10000157 3300017792 Bacteria 62919
84 Ga0163161_10008908 3300017792 Bacteria 6938
85 Ga0209435_100001 3300025206 Bacteria 1424171
86 Ga0207425_1000931 3300025245 Bacteria 13926
87 Ga0209646_1000001 3300025246 Bacteria 3092932
88 Ga0209026_1000001 3300025250 Bacteria 1228671
89 Ga0209759_1000001 3300025256 Bacteria 2799452
90 Ga0209565_1000175 3300025263 Bacteria 81833
91 Ga0209565_1000326 3300025263 Bacteria 42448
92 Ga0209673_1000099 3300025273 Bacteria 193248
93 Ga0209673_1000839 3300025273 Bacteria 40180
94 Ga0209673_1005262 3300025273 Bacteria 6576
95 Ga0209130_1000820 3300025284 Bacteria 26179
96 Ga0209675_1000054 3300025291 Bacteria 193248
97 Ga0209675_1000482 3300025291 Bacteria 30258
98 Ga0209675_1000882 3300025291 Bacteria 19297
99 Ga0209676_1000054 3300025292 Bacteria 365890
100 Ga0209676_1006039 3300025292 Bacteria 6103
101 Ga0209025_1001546 3300025294 Bacteria 29313
102 Ga0209025_1001743 3300025294 Bacteria 26113
103 Ga0209025_1037962 3300025294 Bacteria 2127
104 Ga0209564_1000662 3300025295 Bacteria 50934
105 Ga0209564_1000784 3300025295 Bacteria 44001
106 Ga0209564_1014631 3300025295 Bacteria 3246
107 Ga0209564_1023771 3300025295 Bacteria 2116
108 Ga0209050_1000003 3300025298 Bacteria 1609245
109 Ga0209050_1016095 3300025298 Bacteria 3086
110 Ga0209256_1000001 3300025299 Bacteria 2166974
111 Ga0207426_1001845 3300025302 Bacteria 15584
112 Ga0209051_1000003 3300025303 Bacteria 1609245
113 Ga0209051_1000661 3300025303 Bacteria 38725
114 Ga0209257_1000018 3300025304 Bacteria 836016
115 Ga0209257_1010669 3300025304 Bacteria 4593
116 Ga0207682_10036251 3300025893 Bacteria 1995
117 Ga0207695_10162765 3300025913 Bacteria 2161
118 Ga0207700_10135563 3300025928 Bacteria 2016
119 Ga0207644_10022451 3300025931 Bacteria 4312
120 Ga0207706_10055920 3300025933 Bacteria 3479
121 Ga0207691_10079641 3300025940 Bacteria 2948
122 Ga0207661_10165285 3300025944 Bacteria 1922
123 Ga0207667_10059660 3300025949 Bacteria 3995
124 Ga0207651_10017025 3300025960 Bacteria 4281
125 Ga0207708_10058886 3300026075 Bacteria 2931
126 Ga0207708_10088636 3300026075 Bacteria 2383
127 Ga0207648_10151488 3300026089 Bacteria 2046
128 Ga0207683_10040889 3300026121 Bacteria 4048
129 Ga0207683_10144427 3300026121 Bacteria 2145
130 Ga0209282_1000328 3300027666 Bacteria 23523
131 Ga0268266_10076253 3300028379 Bacteria 2913
132 Ga0265334_10011707 3300028573 Bacteria 3688
133 Ga0307513_10000285 3300031456 Bacteria 73356
134 Ga0307509_10081087 3300031507 Bacteria 3353
135 Ga0307408_100001846 3300031548 Bacteria 15426
136 Ga0307408_100067056 3300031548 Bacteria 2638
137 Ga0265314_10002234 3300031711 Bacteria 20137
138 Ga0307405_10000786 3300031731 Bacteria 12424
139 Ga0307405_10126797 3300031731 Bacteria 1756
140 Ga0307412_10086458 3300031911 Bacteria 2182
141 Ga0307409_100097818 3300031995 Bacteria 2425
142 Ga0373937_0072238 3300036401 Bacteria 3182
143 Ga0395898_0026217 3300037466 Bacteria 5867
144 Ga0436364_0870847 3300037853 Bacteria 5843
145 Ga0395901_0020442 3300038443 Bacteria 6777
146 Ga0436360_0757125 3300039438 Bacteria 3984
147 Ga0439435_0026781 3300042436 Bacteria 1538
148 Ga0466963_0027640 3300044694 Bacteria 3635
149 Ga0466957_0028614 3300044842 Bacteria 3319
150 Ga0495627_013186 3300046453 Bacteria 2913
151 Ga0495637_0003434 3300046520 Bacteria 8414
152 Ga0495588_0008415 3300046674 Bacteria 4734
153 Ga0495636_0000940 3300047318 Bacteria 10831
154 Ga0496122_0000450 3300048925 Bacteria 85686
155 Ga0496123_0000176 3300048926 Bacteria 130010
156 Ga0496124_0007186 3300048927 Bacteria 11900
157 Ga0501034_0001568 3300049571 Bacteria 29868
158 Ga0501034_0004066 3300049571 Bacteria 16421
159 Ga0501038_0025300 3300049574 Bacteria 5293
160 Ga0501039_0042658 3300049575 Bacteria 3505
161 Ga0501041_0009950 3300049577 Bacteria 5602
162 Ga0501042_0032428 3300049578 Bacteria 3700
163 Ga0501046_0030932 3300049580 Bacteria 4344
164 Ga0501046_0200794 3300049580 Bacteria 1484
165 Ga0501071_0074700 3300049587 Bacteria 2474
166 Ga0501072_0003867 3300049588 Bacteria 11321
167 Ga0501072_0009814 3300049588 Bacteria 7278
168 Ga0501072_0028828 3300049588 Bacteria 4334
169 Ga0501075_0001519 3300049591 Bacteria 15123
170 Ga0501075_0225734 3300049591 Bacteria 1428
171 Ga0501076_0001923 3300049592 Bacteria 14195
172 Ga0501077_0016238 3300049593 Bacteria 4690
173 Ga0501077_0018064 3300049593 Bacteria 4457
174 Ga0501079_0016647 3300049741 Bacteria 5615
175 Ga0501079_0065555 3300049741 Bacteria 2802
176 Ga0501079_0129384 3300049741 Bacteria 1964
177 Ga0501080_0029376 3300049742 Bacteria 5118
178 Ga0501080_0210786 3300049742 Bacteria 1780
179 Ga0501081_0016449 3300049743 Bacteria 4889
180 Ga0501081_0039551 3300049743 Bacteria 3228
181 Ga0501083_0044558 3300049744 Bacteria 3003
182 Ga0501045_0009854 3300049824 Bacteria 6685
183 nmdc:mga00v17_146384_c1 3300050491 Bacteria 1516
184 nmdc:mga07m45_637_c1 3300050496 Bacteria 14921
185 nmdc:mga07m45_7020_c1 3300050496 Bacteria 5729
186 nmdc:mga05p37_40355_c1 3300050507 Bacteria 5731
187 nmdc:mga09592_214410_c1 3300050508 Bacteria 1668
188 nmdc:mga0qj67_23142_c1 3300050509 Bacteria 4776
189 nmdc:mga0qj67_34478_c1 3300050509 Bacteria 3954
190 nmdc:mga06r32_1929_c1 3300050510 Bacteria 18484
191 nmdc:mga06r32_375912_c1 3300050510 Bacteria 1404
192 nmdc:mga06r32_70571_c1 3300050510 Bacteria 3379
193 nmdc:mga08y16_232045_c1 3300050511 Bacteria 1909
194 nmdc:mga08y16_262145_c1 3300050511 Bacteria 1785
195 nmdc:mga0n895_14979_c1 3300050512 Bacteria 7063
196 nmdc:mga08x19_94844_c1 3300050514 Bacteria 1973
197 Ga0500610_0001354 3300053079 Bacteria 8288
198 Ga0500610_0003143 3300053079 Bacteria 6272
199 Ga0500644_0002708 3300053088 Bacteria 4426
200 Ga0500650_0042234 3300053098 Bacteria 2107
201 Ga0500593_000393 3300053117 Bacteria 17401
202 Ga0500607_003994 3300053121 Bacteria 10397
203 Ga0500559_0001622 3300053136 Bacteria 12513
204 Ga0500559_0020597 3300053136 Bacteria 2789
205 Ga0500568_0000296 3300053139 Bacteria 40370
206 Ga0500573_0042913 3300053140 Bacteria 2611
207 Ga0500634_0005923 3300053161 Bacteria 5864
208 Ga0500645_000426 3300053730 Bacteria 29176
209 Ga0501084_0008143 3300054114 Bacteria 8641
210 Ga0530510_0029919 3300061734 Bacteria 3909
211 Ga0530510_0103073 3300061734 Bacteria 2087
212 Ga0530510_0203134 3300061734 Bacteria 1472
213 2644325109 2643221658 Bacteria 6064537
214 2644467676 2643221683 Bacteria 5749203
215 2842734746 2842733646 Bacteria 5716726
216 2842748487 2842747753 Bacteria 5578255
217 2889037915 2889033259 Bacteria 9099371
218 2904457121 2904456579 Bacteria 6819253
219 Ga0501076_0180819
220 JGI24739J22299_10006205
221 JGI25155J39150_1000074
222 JGI25156J39149_1000002
223 JGI25154J39366_1000010
224 JGI25157J39369_1000001
225 JGI25159J45721_1002826
226 JGI25151J46595_10003546
227 JGI25151J46595_10005506
228 Ga0006562J51391_1098228
229 Ga0055526_1003829
230 Ga0055526_1003886
231 Ga0055537_1000259
232 Ga0055537_1000545
233 Ga0055524_1000156
234 Ga0055536_1000270
235 Ga0055536_1003134
236 Ga0055534_1000401
237 Ga0055534_1001520
238 Ga0055528_1002369
239 Ga0055528_1004813
240 Ga0055530_10000408
241 Ga0055540_1000033
242 Ga0055540_1014623
243 Ga0055531_10000273
244 Ga0065165_1010360
245 Ga0070676_10075860
246 Ga0070670_100071898
247 Ga0070680_100022089
248 Ga0070669_100014876
249 Ga0070675_100035177
250 Ga0070671_100087124
251 Ga0070673_100067528
252 Ga0070713_100158134
253 Ga0070694_100039777
254 Ga0070694_100040738
255 Ga0070694_100136397
256 Ga0070678_100027800
257 Ga0070662_100129195
258 Ga0068867_100069803
259 Ga0070699_100020104
260 Ga0070697_100016796
261 Ga0070695_100051423
262 Ga0070695_100106619
263 Ga0070696_100108040
264 Ga0070665_100039555
265 Ga0070665_100053571
266 Ga0070704_100009048
267 Ga0070704_100025852
268 Ga0070704_100048660
269 Ga0068855_100057349
270 Ga0070664_100256592
271 Ga0068857_100100818
272 Ga0068857_100229259
273 Ga0068854_100182969
274 Ga0068856_100168971
275 Ga0068860_100197567
276 Ga0075364_10048967
277 Ga0075432_10023747
278 Ga0075370_10009722
279 Ga0075370_10014236
280 Ga0075430_100001562
281 Ga0075430_100035843
282 Ga0075431_100007438
283 Ga0075431_100133792
284 Ga0075434_100042450
285 Ga0075429_100057400
286 Ga0075429_100214824
287 Ga0075436_100006655
288 Ga0099826_10003523
289 Ga0111539_10097573
290 Ga0111539_10288506
291 Ga0114129_10016945
292 Ga0114129_10055762
293 Ga0105243_10072692
294 Ga0105242_10324648
295 Ga0105249_10100498
296 Ga0105239_10036926
297 Ga0157369_10045110
298 Ga0163162_10335861
299 Ga0163163_10188466
300 Ga0157377_10065104
301 Ga0163161_10000157
302 Ga0163161_10008908
303 Ga0209435_100001
304 Ga0207425_1000931
305 Ga0209646_1000001
306 Ga0209026_1000001
307 Ga0209759_1000001
308 Ga0209565_1000175
309 Ga0209565_1000326
310 Ga0209673_1000099
311 Ga0209673_1000839
312 Ga0209673_1005262
313 Ga0209130_1000820
314 Ga0209675_1000054
315 Ga0209675_1000482
316 Ga0209675_1000882
317 Ga0209676_1000054
318 Ga0209676_1006039
319 Ga0209025_1001546
320 Ga0209025_1001743
321 Ga0209025_1037962
322 Ga0209564_1000662
323 Ga0209564_1000784
324 Ga0209564_1014631
325 Ga0209564_1023771
326 Ga0209050_1000003
327 Ga0209050_1016095
328 Ga0209256_1000001
329 Ga0207426_1001845
330 Ga0209051_1000003
331 Ga0209051_1000661
332 Ga0209257_1000018
333 Ga0209257_1010669
334 Ga0207682_10036251
335 Ga0207695_10162765
336 Ga0207700_10135563
337 Ga0207644_10022451
338 Ga0207706_10055920
339 Ga0207691_10079641
340 Ga0207661_10165285
341 Ga0207667_10059660
342 Ga0207651_10017025
343 Ga0207708_10058886
344 Ga0207708_10088636
345 Ga0207648_10151488
346 Ga0207683_10040889
347 Ga0207683_10144427
348 Ga0209282_1000328
349 Ga0268266_10076253
350 Ga0265334_10011707
351 Ga0307513_10000285
352 Ga0307509_10081087
353 Ga0307408_100001846
354 Ga0307408_100067056
355 Ga0265314_10002234
356 Ga0307405_10000786
357 Ga0307405_10126797
358 Ga0307412_10086458
359 Ga0307409_100097818
360 Ga0373937_0072238
361 Ga0395898_0026217
362 Ga0436364_0870847
363 Ga0395901_0020442
364 Ga0436360_0757125
365 Ga0439435_0026781
366 Ga0466963_0027640
367 Ga0466957_0028614
368 Ga0495627_013186
369 Ga0495637_0003434
370 Ga0495588_0008415
371 Ga0495636_0000940
372 Ga0496122_0000450
373 Ga0496123_0000176
374 Ga0496124_0007186
375 Ga0501034_0001568
376 Ga0501034_0004066
377 Ga0501038_0025300
378 Ga0501039_0042658
379 Ga0501041_0009950
380 Ga0501042_0032428
381 Ga0501046_0030932
382 Ga0501046_0200794
383 Ga0501071_0074700
384 Ga0501072_0003867
385 Ga0501072_0009814
386 Ga0501072_0028828
387 Ga0501075_0001519
388 Ga0501075_0225734
389 Ga0501076_0001923
390 Ga0501077_0016238
391 Ga0501077_0018064
392 Ga0501079_0016647
393 Ga0501079_0065555
394 Ga0501079_0129384
395 Ga0501080_0029376
396 Ga0501080_0210786
397 Ga0501081_0016449
398 Ga0501081_0039551
399 Ga0501083_0044558
400 Ga0501045_0009854
401 nmdc:mga00v17_146384_c1
402 nmdc:mga07m45_637_c1
403 nmdc:mga07m45_7020_c1
404 nmdc:mga05p37_40355_c1
405 nmdc:mga09592_214410_c1
406 nmdc:mga0qj67_23142_c1
407 nmdc:mga0qj67_34478_c1
408 nmdc:mga06r32_1929_c1
409 nmdc:mga06r32_375912_c1
410 nmdc:mga06r32_70571_c1
411 nmdc:mga08y16_232045_c1
412 nmdc:mga08y16_262145_c1
413 nmdc:mga0n895_14979_c1
414 nmdc:mga08x19_94844_c1
415 Ga0500610_0001354
416 Ga0500610_0003143
417 Ga0500644_0002708
418 Ga0500650_0042234
419 Ga0500593_000393
420 Ga0500607_003994
421 Ga0500559_0001622
422 Ga0500559_0020597
423 Ga0500568_0000296
424 Ga0500573_0042913
425 Ga0500634_0005923
426 Ga0500645_000426
427 Ga0501084_0008143
428 Ga0530510_0029919
429 Ga0530510_0103073
430 Ga0530510_0203134
431 2644325109
432 2644467676
433 2842734746
434 2842748487
435 2889037915
436 2904457121

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13378

MR_MLE_C

Enolase C-terminal domain-like

213

454

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tte-assembly1.cif.gz_A crystal structure of enolase brado_4202 (target efi-501651) from bradyrhizobium complexed with magnesium and mandelic acid 0.7743 5 444
4a6g-assembly1.cif.gz_A n-acyl amino acid racemase from amycalotopsis sp. ts-1-60: g291d- f323y mutant in complex with n-acetyl methionine 0.7698 8 444
1dtn-assembly1.cif.gz_A mandelate racemase mutant d270n co-crystallized with (s)-atrolactate 0.7689 6 456
7s8w-assembly1.cif.gz_D-2 amycolatopsis sp. t-1-60 n-succinylamino acid racemase/o-succinylbenzoate synthase r266q mutant in complex with n-succinylphenylglycine 0.7648 7 444
4h83-assembly1.cif.gz_F crystal structure of mandelate racemase/muconate lactonizing enzyme (efi target:502127) 0.7645 6 456
ID Description Score Start End Superfamily
2zadB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.7657 168 389 3.20.20.120
2p88C02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.7572 165 388 3.20.20.120
2chrA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.7377 172 388 3.20.20.120
3toyC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.732 167 444 3.20.20.120
3u9iB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.7244 168 437 3.20.20.120
ID Description Score Start End GO Terms
AF-A0A2P5VMW1-F1-model_v4 Mandelate racemase/muconate lactonizing enzyme N-terminal domain-containing protein 0.9837 1 159
AF-A0A6M1Q669-F1-model_v4 deleted 0.9793 1 131
AF-A0A7V7WTA7-F1-model_v4 Mandelate racemase 0.9778 1 397
AF-A0A4Q2L8L1-F1-model_v4 deleted 0.9678 178 303
AF-A0A7U2KDI2-F1-model_v4 deleted 0.9675 1 461

Map