F330265

General Info

Members Datasets Scaffolds Average Seq Length
218 141 436 164

Family's Representative Sequence

Representative Sequence 3300044684|Ga0466966_0120662|Ga0466966_0120662_1070_1591
Length 173
Sequence MSMTLPYLEPLTPREPSARRIPEPPRRGEPGGPPCRICAGETTAPVWSDDNWTLHPPVAGSLPGAVWLACRVHVDSFTDLPGELAADFGRVAARVERAILALGGVGRVHLYRWGDGGAHFHVWFLPRPLGMLEASGMMLPLWEDALPNVPDEELAAAAGRVGAAIRGDGTARR

Samples

Sample ID Description Type Environment
1 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
58 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
61 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
62 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
63 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
64 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
65 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
66 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
67 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
68 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
77 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
78 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
79 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
80 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
81 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
82 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
83 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
86 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
87 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
88 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
91 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
92 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
93 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
94 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
95 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
96 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
101 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
102 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
103 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
104 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
109 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
110 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
130 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
134 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
135 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
138 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.62
Metatranscriptomes 1.38
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.29
Nodule 0
Rhizoplane 6.88
Rhizosphere 89.45
Stem 0
Stem Tuber 0
Unclassified 1.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466966_0120662 3300044684 Bacteria 1610
2 Ga0070658_10167413 3300005327 Bacteria 1845
3 Ga0070683_100014810 3300005329 Bacteria 6834
4 Ga0070683_100042439 3300005329 Bacteria 4188
5 Ga0070683_100116470 3300005329 Bacteria 2523
6 Ga0070683_100407050 3300005329 Bacteria 1298
7 Ga0070680_100292945 3300005336 Bacteria 1379
8 Ga0070661_100670951 3300005344 Bacteria 843
9 Ga0070688_100606743 3300005365 Bacteria 838
10 Ga0070713_100081284 3300005436 Bacteria 2765
11 Ga0070710_10516543 3300005437 Bacteria 820
12 Ga0070710_10602245 3300005437 Bacteria 765
13 Ga0070708_100242200 3300005445 Bacteria 1693
14 Ga0070678_102134828 3300005456 Unclassified 531
15 Ga0070684_100018166 3300005535 Bacteria 5787
16 Ga0070684_100065184 3300005535 Bacteria 3197
17 Ga0070684_100115479 3300005535 Bacteria 2410
18 Ga0070684_100251483 3300005535 Bacteria 1615
19 Ga0070684_100389280 3300005535 Bacteria 1285
20 Ga0070665_100576256 3300005548 Bacteria 1138
21 Ga0070665_101518605 3300005548 Bacteria 678
22 Ga0070704_100036607 3300005549 Bacteria 3346
23 Ga0068855_100142564 3300005563 Bacteria 2730
24 Ga0070664_100104601 3300005564 Bacteria 2465
25 Ga0070664_100313969 3300005564 Bacteria 1419
26 Ga0070664_100770102 3300005564 Bacteria 899
27 Ga0068857_100023091 3300005577 Bacteria 5471
28 Ga0068857_100238471 3300005577 Bacteria 1665
29 Ga0068856_101090338 3300005614 Bacteria 816
30 Ga0068870_10568891 3300005840 Bacteria 766
31 Ga0081455_10039969 3300005937 Bacteria 4140
32 Ga0070717_10043666 3300006028 Bacteria 3659
33 Ga0070717_10193524 3300006028 Bacteria 1778
34 Ga0075364_10001493 3300006051 Bacteria 12734
35 Ga0075432_10020563 3300006058 Bacteria 2257
36 Ga0075432_10288013 3300006058 Bacteria 678
37 Ga0070712_100076591 3300006175 Bacteria 2409
38 Ga0070712_100262354 3300006175 Bacteria 1385
39 Ga0075362_10038087 3300006177 Bacteria 2111
40 Ga0075430_100043807 3300006846 Bacteria 3784
41 Ga0075431_100051978 3300006847 Bacteria 4225
42 Ga0075433_10001917 3300006852 Bacteria 15644
43 Ga0075434_100004879 3300006871 Bacteria 12150
44 Ga0075434_100114168 3300006871 Bacteria 2714
45 Ga0075429_100006760 3300006880 Bacteria 9943
46 Ga0075436_100086106 3300006914 Unclassified 2182
47 Ga0075435_100014523 3300007076 Bacteria 5889
48 Ga0075435_100772738 3300007076 Bacteria 836
49 Ga0105240_10030910 3300009093 Bacteria 6955
50 Ga0111539_10006828 3300009094 Bacteria 14671
51 Ga0111539_10502642 3300009094 Bacteria 1412
52 Ga0114129_10208335 3300009147 Bacteria 2644
53 Ga0105243_10038694 3300009148 Bacteria 3715
54 Ga0105243_10127208 3300009148 Bacteria 2157
55 Ga0157370_10056314 3300013104 Bacteria 3742
56 Ga0157369_10018377 3300013105 Bacteria 7840
57 Ga0157374_10458653 3300013296 Bacteria 1276
58 Ga0163163_10635230 3300014325 Bacteria 1131
59 Ga0157380_11577257 3300014326 Bacteria 711
60 Ga0157376_10422148 3300014969 Bacteria 1294
61 Ga0206353_10901506 3300020082 Bacteria 1304
62 Ga0207643_10291685 3300025908 Bacteria 1013
63 Ga0207705_10178398 3300025909 Bacteria 1602
64 Ga0207695_10124497 3300025913 Bacteria 2542
65 Ga0207693_10172060 3300025915 Bacteria 1705
66 Ga0207660_10152951 3300025917 Bacteria 1774
67 Ga0207700_10315900 3300025928 Bacteria 1353
68 Ga0207706_11440123 3300025933 Bacteria 564
69 Ga0207709_10062422 3300025935 Bacteria 2332
70 Ga0207709_10177613 3300025935 Bacteria 1500
71 Ga0207661_10061718 3300025944 Bacteria 3029
72 Ga0207661_10082988 3300025944 Bacteria 2651
73 Ga0207661_11244325 3300025944 Bacteria 684
74 Ga0207679_10016056 3300025945 Bacteria 4964
75 Ga0207674_10032210 3300026116 Bacteria 5500
76 Ga0207674_10256172 3300026116 Bacteria 1697
77 Ga0207674_11164118 3300026116 Bacteria 741
78 Ga0207683_10951811 3300026121 Bacteria 797
79 Ga0207428_10001132 3300027907 Bacteria 28937
80 Ga0268265_10593194 3300028380 Bacteria 1058
81 Ga0265324_10119592 3300029957 Bacteria 895
82 Ga0265770_1012891 3300030878 Bacteria 1243
83 Ga0265760_10018703 3300031090 Bacteria 1995
84 Ga0373952_0129355 3300035092 Bacteria 692
85 Ga0373936_0090911 3300035113 Bacteria 1280
86 Ga0373953_0087129 3300035117 Bacteria 1304
87 Ga0373943_0092272 3300035170 Bacteria 1570
88 Ga0373946_0020816 3300035171 Bacteria 2538
89 Ga0373955_0075838 3300035172 Bacteria 1890
90 Ga0373935_1234690 3300035692 Bacteria 557
91 Ga0373927_0220428 3300035695 Bacteria 1246
92 Ga0373927_0718423 3300035695 Bacteria 660
93 Ga0373947_0018514 3300035725 Bacteria 4009
94 Ga0373937_0084458 3300036401 Bacteria 2937
95 Ga0373925_0067916 3300037068 Bacteria 2689
96 Ga0395899_0025577 3300037312 Bacteria 4455
97 Ga0395899_0142966 3300037312 Bacteria 1701
98 Ga0395899_0265965 3300037312 Bacteria 1171
99 Ga0395899_0302431 3300037312 Bacteria 1082
100 Ga0395899_0324103 3300037312 Bacteria 1037
101 Ga0395900_0006485 3300037418 Bacteria 12203
102 Ga0395900_0023339 3300037418 Bacteria 6332
103 Ga0395900_0040820 3300037418 Bacteria 4783
104 Ga0395900_0077117 3300037418 Bacteria 3424
105 Ga0395900_1086834 3300037418 Bacteria 717
106 Ga0395898_0009012 3300037466 Bacteria 10504
107 Ga0395898_0034148 3300037466 Bacteria 5071
108 Ga0395898_0050848 3300037466 Bacteria 4054
109 Ga0395898_0197186 3300037466 Bacteria 1923
110 Ga0395905_0008583 3300037471 Bacteria 10070
111 Ga0395905_0017407 3300037471 Bacteria 6823
112 Ga0395905_0656223 3300037471 Bacteria 951
113 Ga0395905_1201324 3300037471 Bacteria 662
114 Ga0395905_1333034 3300037471 Bacteria 622
115 Ga0395901_0003039 3300038443 Bacteria 16910
116 Ga0395901_0035046 3300038443 Bacteria 5186
117 Ga0395901_0067698 3300038443 Bacteria 3719
118 Ga0395901_0110934 3300038443 Bacteria 2880
119 Ga0395901_0255121 3300038443 Bacteria 1826
120 Ga0395901_0299611 3300038443 Bacteria 1667
121 Ga0451793_0534122 3300041452 Bacteria 903
122 Ga0451793_0546910 3300041452 Bacteria 623
123 Ga0451802_0199246 3300041460 Bacteria 804
124 Ga0451833_1125966 3300041491 Bacteria 823
125 Ga0451841_1182868 3300041498 Bacteria 626
126 Ga0451853_0395349 3300041512 Bacteria 2550
127 Ga0450888_022264 3300042126 Bacteria 812
128 Ga0439464_0041806 3300042439 Bacteria 1308
129 Ga0466966_0195985 3300044684 Bacteria 1223
130 Ga0466966_0421147 3300044684 Bacteria 802
131 Ga0466961_0051012 3300044693 Bacteria 2642
132 Ga0466961_0462990 3300044693 Bacteria 767
133 Ga0466961_0468901 3300044693 Bacteria 761
134 Ga0466963_0007405 3300044694 Bacteria 6540
135 Ga0466963_0144300 3300044694 Bacteria 1651
136 Ga0466963_0223645 3300044694 Bacteria 1318
137 Ga0466964_0006548 3300044706 Bacteria 4343
138 Ga0466964_0010501 3300044706 Bacteria 3493
139 Ga0466971_0001693 3300044719 Bacteria 9343
140 Ga0466968_0051978 3300044735 Bacteria 1752
141 Ga0466968_0079681 3300044735 Bacteria 1437
142 Ga0466957_0381567 3300044842 Bacteria 961
143 Ga0466959_0148202 3300045049 Bacteria 1655
144 Ga0466959_0768738 3300045049 Bacteria 644
145 Ga0466958_0000428 3300045836 Bacteria 17380
146 Ga0466967_0006858 3300045976 Bacteria 8129
147 Ga0466967_0009556 3300045976 Bacteria 7205
148 Ga0466967_0029159 3300045976 Bacteria 4616
149 Ga0466967_0107294 3300045976 Bacteria 2561
150 Ga0466967_0236695 3300045976 Bacteria 1740
151 Ga0466967_0334265 3300045976 Bacteria 1463
152 Ga0466967_0422000 3300045976 Bacteria 1300
153 Ga0495603_0109022 3300046455 Bacteria 1616
154 Ga0495584_0067322 3300046491 Bacteria 1800
155 Ga0495585_0108859 3300046492 Bacteria 1476
156 Ga0495585_0406342 3300046492 Bacteria 655
157 Ga0495596_0035047 3300046500 Bacteria 1991
158 Ga0495616_0139885 3300046513 Bacteria 1103
159 Ga0495618_0466325 3300046514 Bacteria 765
160 Ga0495620_0225199 3300046515 Bacteria 717
161 Ga0495628_0204708 3300046516 Bacteria 1486
162 Ga0495630_0054347 3300046517 Bacteria 3000
163 Ga0495630_1167945 3300046517 Bacteria 582
164 Ga0495631_0377133 3300046518 Bacteria 604
165 Ga0495637_0111294 3300046520 Bacteria 1061
166 Ga0495644_0121042 3300046523 Bacteria 996
167 Ga0495642_0047878 3300046528 Bacteria 1752
168 Ga0495652_0046333 3300046529 Bacteria 3733
169 Ga0495645_0437764 3300046543 Bacteria 827
170 Ga0495667_0019622 3300046559 Bacteria 4560
171 Ga0495667_0389480 3300046559 Bacteria 878
172 Ga0495656_0011665 3300046615 Bacteria 3228
173 Ga0495659_0075816 3300046664 Bacteria 1268
174 Ga0495599_0131975 3300046678 Bacteria 1551
175 Ga0495658_0123502 3300046683 Bacteria 1568
176 Ga0495658_0209433 3300046683 Bacteria 1218
177 Ga0495604_0048496 3300047317 Bacteria 3303
178 Ga0495674_0155597 3300047319 Bacteria 1915
179 Ga0495676_0024446 3300047321 Bacteria 5230
180 Ga0495676_0247947 3300047321 Bacteria 1216
181 Ga0495676_0270324 3300047321 Bacteria 1154
182 Ga0495680_0127769 3300047322 Bacteria 1870
183 Ga0495684_0093299 3300047471 Bacteria 2280
184 Ga0496108_0339709 3300048911 Bacteria 1310
185 Ga0496108_0606425 3300048911 Bacteria 954
186 Ga0496109_0120252 3300048912 Bacteria 2447
187 Ga0496109_0293844 3300048912 Bacteria 1532
188 Ga0496109_0400130 3300048912 Bacteria 1297
189 Ga0496109_0512726 3300048912 Bacteria 1132
190 Ga0496110_0935693 3300048913 Bacteria 773
191 Ga0496112_0007867 3300048915 Bacteria 9492
192 Ga0496112_0156333 3300048915 Bacteria 2247
193 Ga0496113_0100443 3300048916 Bacteria 2242
194 Ga0496114_0711625 3300048917 Bacteria 880
195 Ga0496115_0066423 3300048918 Bacteria 2915
196 Ga0501075_0251666 3300049591 Bacteria 1347
197 nmdc:mga03683_6201_c1 3300050489 Bacteria 4081
198 nmdc:mga00v17_9391_c1 3300050491 Bacteria 5291
199 nmdc:mga0yw44_34781_c1 3300050492 Bacteria 2955
200 nmdc:mga05p37_3153_c1 3300050507 Bacteria 19183
201 nmdc:mga09592_3089_c1 3300050508 Bacteria 13508
202 nmdc:mga0qj67_3014_c1 3300050509 Bacteria 12103
203 nmdc:mga06r32_3188_c1 3300050510 Bacteria 14692
204 nmdc:mga08y16_1152361_c1 3300050511 Bacteria 748
205 nmdc:mga08y16_5282_c1 3300050511 Bacteria 13503
206 nmdc:mga0n895_6064_c1 3300050512 Bacteria 10191
207 nmdc:mga0n895_90130_c1 3300050512 Bacteria 3068
208 nmdc:mga0rr50_104862_c1 3300050513 Bacteria 2228
209 nmdc:mga0rr50_407759_c1 3300050513 Bacteria 1149
210 nmdc:mga08x19_43091_c1 3300050514 Unclassified 2879
211 nmdc:mga0a205_47969_c1 3300050515 Bacteria 4122
212 Ga0495601_0055391 3300053077 Bacteria 2511
213 Ga0495595_0021744 3300053084 Bacteria 2806
214 Ga0495619_0060770 3300053085 Bacteria 2512
215 Ga0495619_0215831 3300053085 Bacteria 1329
216 Ga0495619_0541454 3300053085 Bacteria 799
217 Ga0501084_0362310 3300054114 Bacteria 1225
218 Ga0466962_0048969 3300061719 Bacteria 2019
219 Ga0466966_0120662
220 Ga0070658_10167413
221 Ga0070683_100014810
222 Ga0070683_100042439
223 Ga0070683_100116470
224 Ga0070683_100407050
225 Ga0070680_100292945
226 Ga0070661_100670951
227 Ga0070688_100606743
228 Ga0070713_100081284
229 Ga0070710_10516543
230 Ga0070710_10602245
231 Ga0070708_100242200
232 Ga0070678_102134828
233 Ga0070684_100018166
234 Ga0070684_100065184
235 Ga0070684_100115479
236 Ga0070684_100251483
237 Ga0070684_100389280
238 Ga0070665_100576256
239 Ga0070665_101518605
240 Ga0070704_100036607
241 Ga0068855_100142564
242 Ga0070664_100104601
243 Ga0070664_100313969
244 Ga0070664_100770102
245 Ga0068857_100023091
246 Ga0068857_100238471
247 Ga0068856_101090338
248 Ga0068870_10568891
249 Ga0081455_10039969
250 Ga0070717_10043666
251 Ga0070717_10193524
252 Ga0075364_10001493
253 Ga0075432_10020563
254 Ga0075432_10288013
255 Ga0070712_100076591
256 Ga0070712_100262354
257 Ga0075362_10038087
258 Ga0075430_100043807
259 Ga0075431_100051978
260 Ga0075433_10001917
261 Ga0075434_100004879
262 Ga0075434_100114168
263 Ga0075429_100006760
264 Ga0075436_100086106
265 Ga0075435_100014523
266 Ga0075435_100772738
267 Ga0105240_10030910
268 Ga0111539_10006828
269 Ga0111539_10502642
270 Ga0114129_10208335
271 Ga0105243_10038694
272 Ga0105243_10127208
273 Ga0157370_10056314
274 Ga0157369_10018377
275 Ga0157374_10458653
276 Ga0163163_10635230
277 Ga0157380_11577257
278 Ga0157376_10422148
279 Ga0206353_10901506
280 Ga0207643_10291685
281 Ga0207705_10178398
282 Ga0207695_10124497
283 Ga0207693_10172060
284 Ga0207660_10152951
285 Ga0207700_10315900
286 Ga0207706_11440123
287 Ga0207709_10062422
288 Ga0207709_10177613
289 Ga0207661_10061718
290 Ga0207661_10082988
291 Ga0207661_11244325
292 Ga0207679_10016056
293 Ga0207674_10032210
294 Ga0207674_10256172
295 Ga0207674_11164118
296 Ga0207683_10951811
297 Ga0207428_10001132
298 Ga0268265_10593194
299 Ga0265324_10119592
300 Ga0265770_1012891
301 Ga0265760_10018703
302 Ga0373952_0129355
303 Ga0373936_0090911
304 Ga0373953_0087129
305 Ga0373943_0092272
306 Ga0373946_0020816
307 Ga0373955_0075838
308 Ga0373935_1234690
309 Ga0373927_0220428
310 Ga0373927_0718423
311 Ga0373947_0018514
312 Ga0373937_0084458
313 Ga0373925_0067916
314 Ga0395899_0025577
315 Ga0395899_0142966
316 Ga0395899_0265965
317 Ga0395899_0302431
318 Ga0395899_0324103
319 Ga0395900_0006485
320 Ga0395900_0023339
321 Ga0395900_0040820
322 Ga0395900_0077117
323 Ga0395900_1086834
324 Ga0395898_0009012
325 Ga0395898_0034148
326 Ga0395898_0050848
327 Ga0395898_0197186
328 Ga0395905_0008583
329 Ga0395905_0017407
330 Ga0395905_0656223
331 Ga0395905_1201324
332 Ga0395905_1333034
333 Ga0395901_0003039
334 Ga0395901_0035046
335 Ga0395901_0067698
336 Ga0395901_0110934
337 Ga0395901_0255121
338 Ga0395901_0299611
339 Ga0451793_0534122
340 Ga0451793_0546910
341 Ga0451802_0199246
342 Ga0451833_1125966
343 Ga0451841_1182868
344 Ga0451853_0395349
345 Ga0450888_022264
346 Ga0439464_0041806
347 Ga0466966_0195985
348 Ga0466966_0421147
349 Ga0466961_0051012
350 Ga0466961_0462990
351 Ga0466961_0468901
352 Ga0466963_0007405
353 Ga0466963_0144300
354 Ga0466963_0223645
355 Ga0466964_0006548
356 Ga0466964_0010501
357 Ga0466971_0001693
358 Ga0466968_0051978
359 Ga0466968_0079681
360 Ga0466957_0381567
361 Ga0466959_0148202
362 Ga0466959_0768738
363 Ga0466958_0000428
364 Ga0466967_0006858
365 Ga0466967_0009556
366 Ga0466967_0029159
367 Ga0466967_0107294
368 Ga0466967_0236695
369 Ga0466967_0334265
370 Ga0466967_0422000
371 Ga0495603_0109022
372 Ga0495584_0067322
373 Ga0495585_0108859
374 Ga0495585_0406342
375 Ga0495596_0035047
376 Ga0495616_0139885
377 Ga0495618_0466325
378 Ga0495620_0225199
379 Ga0495628_0204708
380 Ga0495630_0054347
381 Ga0495630_1167945
382 Ga0495631_0377133
383 Ga0495637_0111294
384 Ga0495644_0121042
385 Ga0495642_0047878
386 Ga0495652_0046333
387 Ga0495645_0437764
388 Ga0495667_0019622
389 Ga0495667_0389480
390 Ga0495656_0011665
391 Ga0495659_0075816
392 Ga0495599_0131975
393 Ga0495658_0123502
394 Ga0495658_0209433
395 Ga0495604_0048496
396 Ga0495674_0155597
397 Ga0495676_0024446
398 Ga0495676_0247947
399 Ga0495676_0270324
400 Ga0495680_0127769
401 Ga0495684_0093299
402 Ga0496108_0339709
403 Ga0496108_0606425
404 Ga0496109_0120252
405 Ga0496109_0293844
406 Ga0496109_0400130
407 Ga0496109_0512726
408 Ga0496110_0935693
409 Ga0496112_0007867
410 Ga0496112_0156333
411 Ga0496113_0100443
412 Ga0496114_0711625
413 Ga0496115_0066423
414 Ga0501075_0251666
415 nmdc:mga03683_6201_c1
416 nmdc:mga00v17_9391_c1
417 nmdc:mga0yw44_34781_c1
418 nmdc:mga05p37_3153_c1
419 nmdc:mga09592_3089_c1
420 nmdc:mga0qj67_3014_c1
421 nmdc:mga06r32_3188_c1
422 nmdc:mga08y16_1152361_c1
423 nmdc:mga08y16_5282_c1
424 nmdc:mga0n895_6064_c1
425 nmdc:mga0n895_90130_c1
426 nmdc:mga0rr50_104862_c1
427 nmdc:mga0rr50_407759_c1
428 nmdc:mga08x19_43091_c1
429 nmdc:mga0a205_47969_c1
430 Ga0495601_0055391
431 Ga0495595_0021744
432 Ga0495619_0060770
433 Ga0495619_0215831
434 Ga0495619_0541454
435 Ga0501084_0362310
436 Ga0466962_0048969

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6af2-assembly1.cif.gz_A crystal structure of n-terminus deletion mutant of mycobacterium avium diadenosine 5',5'''-p1,p4-tetraphosphate phosphorylase 0.7772 43 162
3lb5-assembly2.cif.gz_D crystal structure of hit-like protein involved in cell-cycle regulation from bartonella henselae with unknown ligand 0.7763 34 163
1ems-assembly1.cif.gz_A crystal structure of the c. elegans nitfhit protein 0.7727 43 163
3lb5-assembly1.cif.gz_A crystal structure of hit-like protein involved in cell-cycle regulation from bartonella henselae with unknown ligand 0.7714 34 163
6af2-assembly1.cif.gz_D-2 crystal structure of n-terminus deletion mutant of mycobacterium avium diadenosine 5',5'''-p1,p4-tetraphosphate phosphorylase 0.7686 43 162
ID Description Score Start End Superfamily
af_P49775_3_108_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8676 43 129 3.30.428.10
af_A0A140LH01_2_105_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8595 43 125 3.30.428.10
af_Q9VXT5_460_584_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.828 43 126 3.30.428.10
af_Q54NJ5_358_522_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8275 43 127 3.30.428.10
3ksvA01 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8189 33 125 3.30.428.10
ID Description Score Start End GO Terms
AF-A0A0Q9RH92-F1-model_v4 HIT domain-containing protein 0.9127 45 162
AF-A0A0Q9RH92-F1-model_v4 HIT domain-containing protein 0.8775 45 162
AF-A0A229UY87-F1-model_v4 Diadenosine tetraphosphate hydrolase 0.8681 33 129 GO:0016787
AF-A0A2D7PGK5-F1-model_v4 HIT domain-containing protein 0.8622 33 125 GO:0016747
AF-A0A2E0QYL4-F1-model_v4 HIT family protein 0.8605 43 124

Map