F330214

General Info

Members Datasets Scaffolds Average Seq Length
218 149 436 684

Family's Representative Sequence

Representative Sequence 3300039450|Ga0436363_0023944|Ga0436363_0023944_4280_6433
Length 717
Sequence MGQRKDDPMERRLRAFKNIMLVSPGFYSKFSHMQTIDSLSINTIRTLCMDAVQKANSGHPGTPMAMAPVVYVLWQEFLRFDPEDPIWPDRDRFILSAGHASTLLYSVLHLAGVKAVNRKYERLGDLSVPLDDLENFRQLESRCPGHPEYRWTSGVETTTGPLGQGVATSVGIALASKWLAERYNRPNFPLFDYDVYALAGDGCMMEGISSEAASLAGHLRLSNLCWIYDNNHITIEGNTSLAFSEDVAGRFLAYGWNVHRVSNANDLDLLREAFNHFKKATDRPTLIIVDSHIAYGAPTKQDTSAAHGEPLGEEEIRATKRRYGWPEDAKFMVPPEVLEDFRAKIGQRGAKARGDWMELFAAYEKEYPELAAETLSIQHREPPKGWDADIPTFPPDAKGIASRDSSGKVLNAIAKNHPWLIGGSADLSPSTKTRLIFEGAGEIGRDSLGGRNIHFGIREHAMGAILNGLALAKLRVFGSGFLIFSDYGRGSLRLAAIMELPVIYIFTHDSIGVGEDGPTHQPVEQLPSLRAIPGLTDIRPCDANEVVEAWRVIMEMKHEPVALILSRQALPTLDRSKFAPATGLRRGAYVLSDASNGSPEVLLIATGSEVSLCVRAQEALKNKGIEARVISIPSWKLFEDQDATYRESVLPSQIKARVSVEQSARFGWERYVGIDGARIGMRTFGESAPLQKLVTKFGFTVEAVVSAAEEQVKSTKR

Samples

Sample ID Description Type Environment
1 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300012494 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610 Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
45 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
62 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
63 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
64 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
65 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
70 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
73 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
79 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
80 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
81 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
82 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
89 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
90 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
91 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
92 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
93 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
99 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
100 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
101 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
106 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
109 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
110 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
133 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
143 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
144 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
147 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
149 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.54
Metatranscriptomes 0
Isolates 0.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.46
Nodule 0
Rhizoplane 2.75
Rhizosphere 93.58
Stem 0
Stem Tuber 0
Unclassified 1.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436363_0023944 3300039450 Bacteria 13577
2 JGI25407J50210_10001614 3300003373 Bacteria 5150
3 Ga0070670_100097164 3300005331 Bacteria 2534
4 Ga0068869_100004253 3300005334 Bacteria 8880
5 Ga0070668_100030251 3300005347 Bacteria 4117
6 Ga0070675_100006500 3300005354 Bacteria 8976
7 Ga0070674_100000413 3300005356 Bacteria 21566
8 Ga0070713_100082541 3300005436 Bacteria 2745
9 Ga0070694_100027471 3300005444 Bacteria 3695
10 Ga0070708_100012461 3300005445 Bacteria 6941
11 Ga0070678_100044230 3300005456 Bacteria 3179
12 Ga0070681_10035425 3300005458 Bacteria 5014
13 Ga0070706_100001111 3300005467 Bacteria 29107
14 Ga0070706_100005967 3300005467 Bacteria 11525
15 Ga0070706_100018902 3300005467 Bacteria 6356
16 Ga0070706_100025523 3300005467 Bacteria 5439
17 Ga0070706_100036013 3300005467 Bacteria 4570
18 Ga0070707_100002282 3300005468 Bacteria 18326
19 Ga0070707_100003016 3300005468 Bacteria 15973
20 Ga0070707_100148258 3300005468 Bacteria 2284
21 Ga0070698_100002897 3300005471 Bacteria 18892
22 Ga0070698_100057250 3300005471 Bacteria 3945
23 Ga0070698_100138565 3300005471 Bacteria 2386
24 Ga0070699_100007437 3300005518 Bacteria 9532
25 Ga0070699_100024408 3300005518 Bacteria 5209
26 Ga0070699_100050139 3300005518 Bacteria 3614
27 Ga0070697_100000039 3300005536 Bacteria 95513
28 Ga0070697_100001464 3300005536 Bacteria 17988
29 Ga0070697_100003318 3300005536 Bacteria 12365
30 Ga0070697_100030309 3300005536 Unclassified 4345
31 Ga0070697_100065999 3300005536 Bacteria 2958
32 Ga0070697_100086906 3300005536 Bacteria 2581
33 Ga0068863_100090699 3300005841 Bacteria 2898
34 Ga0081455_10026855 3300005937 Bacteria 5287
35 Ga0081538_10000025 3300005981 Bacteria 129366
36 Ga0081538_10002277 3300005981 Bacteria 18973
37 Ga0081538_10004027 3300005981 Bacteria 13675
38 Ga0081538_10025538 3300005981 Bacteria 4161
39 Ga0081538_10039479 3300005981 Bacteria 3027
40 Ga0081540_1003169 3300005983 Bacteria 13122
41 Ga0081539_10000085 3300005985 Bacteria 217816
42 Ga0070717_10082403 3300006028 Unclassified 2703
43 Ga0075432_10011418 3300006058 Bacteria 3017
44 Ga0070712_100046321 3300006175 Bacteria 3006
45 Ga0097621_100110536 3300006237 Bacteria 2322
46 Ga0068871_100026599 3300006358 Bacteria 4517
47 Ga0075428_100005344 3300006844 Bacteria 14279
48 Ga0075428_100060961 3300006844 Bacteria 4131
49 Ga0075428_100088806 3300006844 Bacteria 3371
50 Ga0075431_100009986 3300006847 Bacteria 9535
51 Ga0075431_100027712 3300006847 Bacteria 5816
52 Ga0075431_100047920 3300006847 Bacteria 4406
53 Ga0075433_10001096 3300006852 Bacteria 19545
54 Ga0075433_10019296 3300006852 Bacteria 5680
55 Ga0075434_100057435 3300006871 Bacteria 3867
56 Ga0075429_100035590 3300006880 Bacteria 4331
57 Ga0075436_100016376 3300006914 Bacteria 5073
58 Ga0075435_100011777 3300007076 Bacteria 6453
59 Ga0075435_100044165 3300007076 Bacteria 3569
60 Ga0114129_10011557 3300009147 Bacteria 12573
61 Ga0114129_10014587 3300009147 Bacteria 11195
62 Ga0114129_10072815 3300009147 Bacteria 4788
63 Ga0105248_10090247 3300009177 Bacteria 3451
64 Ga0105239_10075336 3300010375 Bacteria 3710
65 Ga0157341_1000088 3300012494 Bacteria 3879
66 Ga0163163_10009430 3300014325 Bacteria 8717
67 Ga0157380_10004204 3300014326 Bacteria 9960
68 Ga0157376_10003959 3300014969 Bacteria 10247
69 Ga0213872_10002113 3300021361 Bacteria 11956
70 Ga0213872_10004160 3300021361 Bacteria 7779
71 Ga0213876_10000233 3300021384 Bacteria 54559
72 Ga0228598_1003790 3300024227 Bacteria 3228
73 Ga0207692_10019876 3300025898 Bacteria 3044
74 Ga0207684_10001002 3300025910 Bacteria 31689
75 Ga0207684_10003648 3300025910 Bacteria 14957
76 Ga0207684_10006093 3300025910 Bacteria 11029
77 Ga0207684_10026222 3300025910 Unclassified 4968
78 Ga0207693_10016023 3300025915 Bacteria 6000
79 Ga0207663_10021821 3300025916 Bacteria 3651
80 Ga0207646_10001241 3300025922 Bacteria 31959
81 Ga0207646_10022083 3300025922 Bacteria 5870
82 Ga0207646_10023980 3300025922 Bacteria 5596
83 Ga0207646_10140152 3300025922 Bacteria 2178
84 Ga0207659_10010719 3300025926 Bacteria 5764
85 Ga0207669_10000260 3300025937 Bacteria 24012
86 Ga0207669_10019115 3300025937 Bacteria 3559
87 Ga0207665_10000049 3300025939 Bacteria 76350
88 Ga0207665_10017627 3300025939 Bacteria 4692
89 Ga0207665_10029262 3300025939 Bacteria 3642
90 Ga0207689_10005618 3300025942 Bacteria 11172
91 Ga0207712_10020171 3300025961 Bacteria 4363
92 Ga0207668_10009048 3300025972 Bacteria 5952
93 Ga0207703_10137776 3300026035 Bacteria 2115
94 Ga0207674_10042093 3300026116 Bacteria 4720
95 Ga0207428_10000496 3300027907 Bacteria 47043
96 Ga0207428_10043869 3300027907 Bacteria 3610
97 Ga0268266_10038572 3300028379 Bacteria 4067
98 Ga0268265_10046170 3300028380 Bacteria 3255
99 Ga0265332_10002265 3300031238 Bacteria 9856
100 Ga0265332_10002571 3300031238 Bacteria 9190
101 Ga0265339_10000098 3300031249 Bacteria 73022
102 Ga0265339_10001316 3300031249 Bacteria 18580
103 Ga0265331_10003844 3300031250 Bacteria 9515
104 Ga0307408_100009747 3300031548 Bacteria 6331
105 Ga0307408_100059311 3300031548 Bacteria 2785
106 Ga0316579_10032669 3300031691 Bacteria 2387
107 Ga0265314_10000314 3300031711 Bacteria 68677
108 Ga0265342_10000189 3300031712 Bacteria 68850
109 Ga0265342_10010618 3300031712 Bacteria 6369
110 Ga0307405_10017323 3300031731 Bacteria 3950
111 Ga0316577_10006064 3300031733 Bacteria 6370
112 Ga0307413_10005752 3300031824 Bacteria 5574
113 Ga0307413_10019642 3300031824 Bacteria 3576
114 Ga0307413_10029399 3300031824 Bacteria 3073
115 Ga0307410_10002149 3300031852 Bacteria 9371
116 Ga0307410_10022063 3300031852 Bacteria 3928
117 Ga0307406_10000474 3300031901 Bacteria 23161
118 Ga0307406_10023947 3300031901 Bacteria 3640
119 Ga0307406_10024272 3300031901 Bacteria 3620
120 Ga0307407_10002826 3300031903 Bacteria 6936
121 Ga0307407_10017386 3300031903 Bacteria 3607
122 Ga0307409_100001967 3300031995 Bacteria 10524
123 Ga0307416_100001105 3300032002 Bacteria 14461
124 Ga0307411_10048191 3300032005 Bacteria 2760
125 Ga0307415_100028916 3300032126 Bacteria 3534
126 Ga0373934_0028326 3300035086 Bacteria 2182
127 Ga0373940_0002403 3300035088 Bacteria 3637
128 Ga0373936_0031291 3300035113 Bacteria 2101
129 Ga0373954_0018280 3300035118 Bacteria 3154
130 Ga0373954_0036012 3300035118 Bacteria 2296
131 Ga0373946_0013677 3300035171 Bacteria 3053
132 Ga0373927_0003389 3300035695 Bacteria 11473
133 Ga0373927_0050874 3300035695 Bacteria 2679
134 Ga0316582_0009743 3300036647 Bacteria 5225
135 Ga0395898_0001275 3300037466 Bacteria 37117
136 Ga0436364_1387007 3300037853 Bacteria 12970
137 Ga0436365_0177838 3300039437 Bacteria 4483
138 Ga0436365_0219192 3300039437 Bacteria 103034
139 Ga0436365_0972320 3300039437 Unclassified 1963
140 Ga0436360_0523940 3300039438 Bacteria 2346
141 Ga0436361_0366610 3300039447 Bacteria 4320
142 Ga0436361_0609603 3300039447 Bacteria 7560
143 Ga0436363_0397660 3300039450 Bacteria 3090
144 Ga0466966_0001300 3300044684 Bacteria 15990
145 Ga0466963_0017120 3300044694 Bacteria 4514
146 Ga0466963_0033704 3300044694 Bacteria 3327
147 Ga0466971_0001126 3300044719 Bacteria 11121
148 Ga0466960_0032807 3300044901 Bacteria 2408
149 Ga0451576_0003046 3300045051 Bacteria 23610
150 Ga0451576_0027927 3300045051 Bacteria 6053
151 Ga0466967_0026324 3300045976 Bacteria 4816
152 Ga0495641_0017700 3300046461 Bacteria 3702
153 Ga0495651_0006979 3300046462 Bacteria 8635
154 Ga0495580_0003165 3300046472 Bacteria 14112
155 Ga0495580_0022497 3300046472 Bacteria 4638
156 Ga0495580_0036130 3300046472 Bacteria 3548
157 Ga0495582_0010934 3300046473 Bacteria 4994
158 Ga0495666_0005019 3300046526 Bacteria 6697
159 Ga0495665_0007616 3300046531 Bacteria 5864
160 Ga0495640_0010480 3300046533 Bacteria 7159
161 Ga0495586_0016309 3300046535 Bacteria 3951
162 Ga0495667_0001488 3300046559 Bacteria 15435
163 Ga0495635_0008424 3300046663 Bacteria 7199
164 Ga0495646_0013857 3300046680 Bacteria 5126
165 Ga0495658_0016712 3300046683 Bacteria 3778
166 Ga0495600_0002756 3300046809 Bacteria 10181
167 Ga0495581_0001611 3300047315 Bacteria 12592
168 Ga0495636_0001097 3300047318 Bacteria 10170
169 Ga0495674_0098856 3300047319 Bacteria 2485
170 Ga0495615_0001146 3300048090 Bacteria 3818
171 Ga0496108_0007759 3300048911 Bacteria 8694
172 Ga0496109_0002802 3300048912 Bacteria 14598
173 Ga0496109_0130555 3300048912 Bacteria 2345
174 Ga0496110_0018473 3300048913 Bacteria 5847
175 Ga0496112_0039979 3300048915 Bacteria 4584
176 Ga0496112_0072878 3300048915 Bacteria 3395
177 Ga0501031_0037910 3300049568 Bacteria 3146
178 Ga0501037_0007509 3300049573 Bacteria 7982
179 Ga0501037_0015865 3300049573 Bacteria 5547
180 Ga0501038_0012683 3300049574 Bacteria 7703
181 Ga0501041_0008490 3300049577 Bacteria 6044
182 Ga0501042_0006909 3300049578 Bacteria 7405
183 Ga0501043_0019164 3300049579 Bacteria 5371
184 Ga0501046_0005046 3300049580 Bacteria 11837
185 Ga0501068_0005156 3300049584 Bacteria 7125
186 Ga0501070_0002997 3300049586 Bacteria 14697
187 Ga0501071_0016539 3300049587 Bacteria 5074
188 Ga0501071_0018543 3300049587 Bacteria 4820
189 Ga0501074_0002493 3300049590 Bacteria 12826
190 Ga0501075_0001382 3300049591 Bacteria 15781
191 Ga0501076_0032192 3300049592 Bacteria 4092
192 Ga0501076_0116049 3300049592 Bacteria 2167
193 Ga0501077_0004234 3300049593 Bacteria 8673
194 Ga0501079_0123214 3300049741 Bacteria 2016
195 Ga0501081_0074250 3300049743 Bacteria 2372
196 Ga0501083_0055543 3300049744 Bacteria 2654
197 Ga0501035_0001203 3300049822 Bacteria 26985
198 Ga0501035_0044068 3300049822 Bacteria 4019
199 Ga0501045_0011941 3300049824 Bacteria 6105
200 nmdc:mga09592_96721_c1 3300050508 Bacteria 2526
201 nmdc:mga06r32_16966_c1 3300050510 Bacteria 6643
202 nmdc:mga06r32_26914_c1 3300050510 Bacteria 5367
203 nmdc:mga06r32_94154_c1 3300050510 Bacteria 2931
204 nmdc:mga08y16_40592_c1 3300050511 Bacteria 4876
205 nmdc:mga0n895_73549_c1 3300050512 Bacteria 3393
206 nmdc:mga08x19_17800_c1 3300050514 Bacteria 4350
207 nmdc:mga0a205_12917_c1 3300050515 Bacteria 6858
208 nmdc:mga0a205_50294_c1 3300050515 Bacteria 4024
209 nmdc:mga0a205_7882_c1 3300050515 Bacteria 9670
210 Ga0495612_0014032 3300053078 Bacteria 3226
211 Ga0495619_0009608 3300053085 Bacteria 6100
212 Ga0500628_001383 3300053129 Bacteria 4170
213 Ga0501084_0001799 3300054114 Bacteria 17086
214 Ga0501084_0068284 3300054114 Bacteria 2976
215 Ga0501082_0007785 3300060353 Bacteria 9243
216 Ga0466962_0004172 3300061719 Bacteria 6925
217 Ga0530510_0012471 3300061734 Bacteria 5970
218 2920113798 2920107658 Bacteria 10042636
219 Ga0436363_0023944
220 JGI25407J50210_10001614
221 Ga0070670_100097164
222 Ga0068869_100004253
223 Ga0070668_100030251
224 Ga0070675_100006500
225 Ga0070674_100000413
226 Ga0070713_100082541
227 Ga0070694_100027471
228 Ga0070708_100012461
229 Ga0070678_100044230
230 Ga0070681_10035425
231 Ga0070706_100001111
232 Ga0070706_100005967
233 Ga0070706_100018902
234 Ga0070706_100025523
235 Ga0070706_100036013
236 Ga0070707_100002282
237 Ga0070707_100003016
238 Ga0070707_100148258
239 Ga0070698_100002897
240 Ga0070698_100057250
241 Ga0070698_100138565
242 Ga0070699_100007437
243 Ga0070699_100024408
244 Ga0070699_100050139
245 Ga0070697_100000039
246 Ga0070697_100001464
247 Ga0070697_100003318
248 Ga0070697_100030309
249 Ga0070697_100065999
250 Ga0070697_100086906
251 Ga0068863_100090699
252 Ga0081455_10026855
253 Ga0081538_10000025
254 Ga0081538_10002277
255 Ga0081538_10004027
256 Ga0081538_10025538
257 Ga0081538_10039479
258 Ga0081540_1003169
259 Ga0081539_10000085
260 Ga0070717_10082403
261 Ga0075432_10011418
262 Ga0070712_100046321
263 Ga0097621_100110536
264 Ga0068871_100026599
265 Ga0075428_100005344
266 Ga0075428_100060961
267 Ga0075428_100088806
268 Ga0075431_100009986
269 Ga0075431_100027712
270 Ga0075431_100047920
271 Ga0075433_10001096
272 Ga0075433_10019296
273 Ga0075434_100057435
274 Ga0075429_100035590
275 Ga0075436_100016376
276 Ga0075435_100011777
277 Ga0075435_100044165
278 Ga0114129_10011557
279 Ga0114129_10014587
280 Ga0114129_10072815
281 Ga0105248_10090247
282 Ga0105239_10075336
283 Ga0157341_1000088
284 Ga0163163_10009430
285 Ga0157380_10004204
286 Ga0157376_10003959
287 Ga0213872_10002113
288 Ga0213872_10004160
289 Ga0213876_10000233
290 Ga0228598_1003790
291 Ga0207692_10019876
292 Ga0207684_10001002
293 Ga0207684_10003648
294 Ga0207684_10006093
295 Ga0207684_10026222
296 Ga0207693_10016023
297 Ga0207663_10021821
298 Ga0207646_10001241
299 Ga0207646_10022083
300 Ga0207646_10023980
301 Ga0207646_10140152
302 Ga0207659_10010719
303 Ga0207669_10000260
304 Ga0207669_10019115
305 Ga0207665_10000049
306 Ga0207665_10017627
307 Ga0207665_10029262
308 Ga0207689_10005618
309 Ga0207712_10020171
310 Ga0207668_10009048
311 Ga0207703_10137776
312 Ga0207674_10042093
313 Ga0207428_10000496
314 Ga0207428_10043869
315 Ga0268266_10038572
316 Ga0268265_10046170
317 Ga0265332_10002265
318 Ga0265332_10002571
319 Ga0265339_10000098
320 Ga0265339_10001316
321 Ga0265331_10003844
322 Ga0307408_100009747
323 Ga0307408_100059311
324 Ga0316579_10032669
325 Ga0265314_10000314
326 Ga0265342_10000189
327 Ga0265342_10010618
328 Ga0307405_10017323
329 Ga0316577_10006064
330 Ga0307413_10005752
331 Ga0307413_10019642
332 Ga0307413_10029399
333 Ga0307410_10002149
334 Ga0307410_10022063
335 Ga0307406_10000474
336 Ga0307406_10023947
337 Ga0307406_10024272
338 Ga0307407_10002826
339 Ga0307407_10017386
340 Ga0307409_100001967
341 Ga0307416_100001105
342 Ga0307411_10048191
343 Ga0307415_100028916
344 Ga0373934_0028326
345 Ga0373940_0002403
346 Ga0373936_0031291
347 Ga0373954_0018280
348 Ga0373954_0036012
349 Ga0373946_0013677
350 Ga0373927_0003389
351 Ga0373927_0050874
352 Ga0316582_0009743
353 Ga0395898_0001275
354 Ga0436364_1387007
355 Ga0436365_0177838
356 Ga0436365_0219192
357 Ga0436365_0972320
358 Ga0436360_0523940
359 Ga0436361_0366610
360 Ga0436361_0609603
361 Ga0436363_0397660
362 Ga0466966_0001300
363 Ga0466963_0017120
364 Ga0466963_0033704
365 Ga0466971_0001126
366 Ga0466960_0032807
367 Ga0451576_0003046
368 Ga0451576_0027927
369 Ga0466967_0026324
370 Ga0495641_0017700
371 Ga0495651_0006979
372 Ga0495580_0003165
373 Ga0495580_0022497
374 Ga0495580_0036130
375 Ga0495582_0010934
376 Ga0495666_0005019
377 Ga0495665_0007616
378 Ga0495640_0010480
379 Ga0495586_0016309
380 Ga0495667_0001488
381 Ga0495635_0008424
382 Ga0495646_0013857
383 Ga0495658_0016712
384 Ga0495600_0002756
385 Ga0495581_0001611
386 Ga0495636_0001097
387 Ga0495674_0098856
388 Ga0495615_0001146
389 Ga0496108_0007759
390 Ga0496109_0002802
391 Ga0496109_0130555
392 Ga0496110_0018473
393 Ga0496112_0039979
394 Ga0496112_0072878
395 Ga0501031_0037910
396 Ga0501037_0007509
397 Ga0501037_0015865
398 Ga0501038_0012683
399 Ga0501041_0008490
400 Ga0501042_0006909
401 Ga0501043_0019164
402 Ga0501046_0005046
403 Ga0501068_0005156
404 Ga0501070_0002997
405 Ga0501071_0016539
406 Ga0501071_0018543
407 Ga0501074_0002493
408 Ga0501075_0001382
409 Ga0501076_0032192
410 Ga0501076_0116049
411 Ga0501077_0004234
412 Ga0501079_0123214
413 Ga0501081_0074250
414 Ga0501083_0055543
415 Ga0501035_0001203
416 Ga0501035_0044068
417 Ga0501045_0011941
418 nmdc:mga09592_96721_c1
419 nmdc:mga06r32_16966_c1
420 nmdc:mga06r32_26914_c1
421 nmdc:mga06r32_94154_c1
422 nmdc:mga08y16_40592_c1
423 nmdc:mga0n895_73549_c1
424 nmdc:mga08x19_17800_c1
425 nmdc:mga0a205_12917_c1
426 nmdc:mga0a205_50294_c1
427 nmdc:mga0a205_7882_c1
428 Ga0495612_0014032
429 Ga0495619_0009608
430 Ga0500628_001383
431 Ga0501084_0001799
432 Ga0501084_0068284
433 Ga0501082_0007785
434 Ga0466962_0004172
435 Ga0530510_0012471
436 2920113798

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22613

Transketolase_C_1

Transketolase-like TK C-terminal domain

587

700

0.99

PF00456

Transketolase_N

Transketolase, thiamine diphosphate binding domain

36

383

0.95

PF02779

Transket_pyr

Transketolase, pyrimidine binding domain

398

572

0.95

PF02780

Transketolase_C

Transketolase, C-terminal domain

593

704

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nd5-assembly1.cif.gz_B crystal structure of transketolase from chlamydomonas reinhardtii in complex with tpp and mg2+ 0.9651 20 678
8cip-assembly2.cif.gz_D crystal structure of transketolase from geobacillus stearothermophilus 0.965 20 680
3hyl-assembly1.cif.gz_A crystal structure of transketolase from bacillus anthracis 0.9626 20 677
8ci0-assembly1.cif.gz_CCC maize transketolase in complex with tpp and hydrolyzed (+)-cornexistin 0.9621 20 676
1ay0-assembly1.cif.gz_B identification of catalytically important residues in yeast transketolase 0.9612 20 679
ID Description Score Start End Superfamily
af_A0A1D6P5P4_1_115_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.983 174 285 3.40.50.970
af_Q2FYT8_1_292_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9767 39 341 3.40.50.970
af_Q4CW17_1_198_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9711 150 342 3.40.50.970
af_C6KSV3_9_337_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9698 20 345 3.40.50.970
af_Q2FYT8_1_292_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9668 39 341 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A352PX19-F1-model_v4 Transketolase 0.9895 135 270 GO:0004802
GO:0005829
GO:0006098
AF-A0A812W8V0-F1-model_v4 Tkt protein 0.9889 34 207 GO:0004802
GO:0005829
GO:0006098
AF-A0A534ARH5-F1-model_v4 Transketolase 0.9881 106 292 GO:0004802
GO:0005829
GO:0006098
AF-A0A7S4MKF2-F1-model_v4 Transketolase N-terminal domain-containing protein 0.9864 140 257 GO:0004802
GO:0005829
GO:0006098
AF-A0A349WDN5-F1-model_v4 Transketolase 0.9862 128 277 GO:0004802
GO:0005829
GO:0006098

Map