F329767

General Info

Members Datasets Scaffolds Average Seq Length
218 156 436 257

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10270624|Ga0081455_102706242
Length 296
Sequence MTGPILRDKTNSRRQLRLASCGPLISLAPGPRLSFHLLTVKIRVLVVDDEPLARERVRKLLAHEPEVECVGECADGTSAVEAIREQSPDVVFLDVQMPELDGFGVLTQLSGETMPAVVFTTAHDRFALKAFEVHAVDYLLKPFDKARFTTALRRAIDQVRRRQTGDLSQRLTALLADVRPESKSKHLQRIAVKSSGRVVFVKVEDIDWIEAADNYVSLHVGAEQHLHRETMSALEGQLAPDKFMRISRSTIVNMDRIKELQPLFHGEYAVVLRSGAKLTLSRSYRDKLDHLMGRMS

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
73 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
100 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
105 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
106 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
107 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
113 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
114 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
115 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
116 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
117 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
118 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
124 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
125 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
126 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
127 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
133 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
134 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
135 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
136 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
139 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
140 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
147 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
148 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
149 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
156 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.05
Nodule 0
Rhizoplane 3.21
Rhizosphere 88.53
Stem 0
Stem Tuber 0
Unclassified 10.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10270624 3300005937 Bacteria 1232
2 JGI25406J46586_10003999 3300003203 Bacteria 6897
3 rootL2_10133287 3300003322 Bacteria 2771
4 Ga0065704_10086075 3300005289 Unclassified 3157
5 Ga0065712_10275837 3300005290 Bacteria 906
6 Ga0065715_10014681 3300005293 Bacteria 2178
7 Ga0065707_10006748 3300005295 Bacteria 4744
8 Ga0065707_10119196 3300005295 Bacteria 2166
9 Ga0070690_100016726 3300005330 Bacteria 4400
10 Ga0070670_100245970 3300005331 Bacteria 1557
11 Ga0070677_10148794 3300005333 Bacteria 1087
12 Ga0068868_100275752 3300005338 Bacteria 1422
13 Ga0070689_100020342 3300005340 Bacteria 4923
14 Ga0070689_100044000 3300005340 Bacteria 3434
15 Ga0070689_100158155 3300005340 Bacteria 1830
16 Ga0070675_100000005 3300005354 Bacteria 295918
17 Ga0070675_100041217 3300005354 Bacteria 3771
18 Ga0070675_100439202 3300005354 Bacteria 1169
19 Ga0070671_100038538 3300005355 Bacteria 3967
20 Ga0070674_100018964 3300005356 Bacteria 4361
21 Ga0070673_100369021 3300005364 Bacteria 1277
22 Ga0070688_100008205 3300005365 Bacteria 5660
23 Ga0070688_100159798 3300005365 Bacteria 1547
24 Ga0070667_100367045 3300005367 Bacteria 1305
25 Ga0070714_100068154 3300005435 Bacteria 3070
26 Ga0070713_100388051 3300005436 Bacteria 1302
27 Ga0070705_100181252 3300005440 Bacteria 1427
28 Ga0070694_100035246 3300005444 Bacteria 3306
29 Ga0070694_100097284 3300005444 Unclassified 2076
30 Ga0070694_100386460 3300005444 Bacteria 1093
31 Ga0070708_100487091 3300005445 Bacteria 1163
32 Ga0070708_100574575 3300005445 Bacteria 1063
33 Ga0070663_100093854 3300005455 Bacteria 2227
34 Ga0070662_100084118 3300005457 Bacteria 2376
35 Ga0070662_100351440 3300005457 Bacteria 1208
36 Ga0070681_10129166 3300005458 Bacteria 2459
37 Ga0070681_10257754 3300005458 Bacteria 1656
38 Ga0070685_10126597 3300005466 Bacteria 1592
39 Ga0070698_100016720 3300005471 Bacteria 7739
40 Ga0070697_100000861 3300005536 Bacteria 22812
41 Ga0070672_100175752 3300005543 Bacteria 1782
42 Ga0070695_100203349 3300005545 Bacteria 1417
43 Ga0070665_100071681 3300005548 Bacteria 3471
44 Ga0070665_100387077 3300005548 Bacteria 1406
45 Ga0070704_100359402 3300005549 Bacteria 1232
46 Ga0070704_100421517 3300005549 Unclassified 1143
47 Ga0070664_100035448 3300005564 Bacteria 4188
48 Ga0068854_100140964 3300005578 Bacteria 1850
49 Ga0068859_100248802 3300005617 Bacteria 1868
50 Ga0068859_100549224 3300005617 Bacteria 1250
51 Ga0068864_100169281 3300005618 Bacteria 1991
52 Ga0068863_100519506 3300005841 Bacteria 1174
53 Ga0068858_100270055 3300005842 Unclassified 1618
54 Ga0068860_100006099 3300005843 Bacteria 12127
55 Ga0068860_100332712 3300005843 Bacteria 1492
56 Ga0068860_100498006 3300005843 Bacteria 1216
57 Ga0068862_100236005 3300005844 Bacteria 1661
58 Ga0068862_100508281 3300005844 Bacteria 1145
59 Ga0081539_10000230 3300005985 Bacteria 131269
60 Ga0081539_10000344 3300005985 Bacteria 102134
61 Ga0081539_10004502 3300005985 Bacteria 15324
62 Ga0070717_10016551 3300006028 Bacteria 5719
63 Ga0070717_10046019 3300006028 Bacteria 3569
64 Ga0070717_10061802 3300006028 Bacteria 3105
65 Ga0075363_100193029 3300006048 Bacteria 1162
66 Ga0075364_10067223 3300006051 Bacteria 2355
67 Ga0075364_10339078 3300006051 Bacteria 1024
68 Ga0070712_100101579 3300006175 Unclassified 2128
69 Ga0075367_10005882 3300006178 Bacteria 6149
70 Ga0075367_10192513 3300006178 Bacteria 1272
71 Ga0075366_10014105 3300006195 Bacteria 4559
72 Ga0068871_100785143 3300006358 Bacteria 877
73 Ga0075428_100002519 3300006844 Bacteria 19910
74 Ga0075428_100006739 3300006844 Bacteria 12778
75 Ga0075428_100166615 3300006844 Bacteria 2390
76 Ga0075428_100192963 3300006844 Bacteria 2203
77 Ga0075431_100073592 3300006847 Bacteria 3525
78 Ga0075431_100388759 3300006847 Unclassified 1398
79 Ga0075433_10304426 3300006852 Unclassified 1411
80 Ga0068865_100048991 3300006881 Bacteria 2910
81 Ga0097620_100248787 3300006931 Bacteria 1868
82 Ga0097620_100549270 3300006931 Bacteria 1250
83 Ga0075435_100047552 3300007076 Unclassified 3445
84 Ga0111539_10029648 3300009094 Bacteria 6661
85 Ga0111539_10373890 3300009094 Bacteria 1659
86 Ga0114129_10007753 3300009147 Bacteria 15276
87 Ga0114129_10072157 3300009147 Bacteria 4813
88 Ga0114129_10207077 3300009147 Bacteria 2653
89 Ga0114129_10357054 3300009147 Bacteria 1935
90 Ga0114129_11000301 3300009147 Bacteria 1053
91 Ga0105242_10267654 3300009176 Bacteria 1546
92 Ga0105248_10287651 3300009177 Bacteria 1851
93 Ga0105237_10341495 3300009545 Unclassified 1502
94 Ga0105238_10310135 3300009551 Bacteria 1563
95 Ga0105249_10037688 3300009553 Bacteria 4387
96 Ga0105246_10319385 3300011119 Bacteria 1261
97 Ga0157375_10596077 3300013308 Bacteria 1264
98 Ga0163163_10083348 3300014325 Unclassified 3202
99 Ga0163163_10260436 3300014325 Bacteria 1785
100 Ga0163163_10577575 3300014325 Bacteria 1187
101 Ga0157380_10596202 3300014326 Bacteria 1092
102 Ga0157377_10355910 3300014745 Bacteria 984
103 Ga0157376_10221367 3300014969 Bacteria 1753
104 Ga0157376_10435212 3300014969 Bacteria 1276
105 Ga0157376_10465943 3300014969 Bacteria 1235
106 Ga0163161_10227715 3300017792 Bacteria 1446
107 Ga0213874_10009665 3300021377 Bacteria 2391
108 Ga0213876_10006638 3300021384 Bacteria 6313
109 Ga0228598_1000995 3300024227 Bacteria 6195
110 Ga0207682_10020015 3300025893 Bacteria 2624
111 Ga0207695_10006595 3300025913 Bacteria 15007
112 Ga0207662_10387382 3300025918 Bacteria 945
113 Ga0207652_10197960 3300025921 Bacteria 1808
114 Ga0207646_10344316 3300025922 Bacteria 1347
115 Ga0207659_10000067 3300025926 Bacteria 66315
116 Ga0207659_10116493 3300025926 Bacteria 2040
117 Ga0207659_10148860 3300025926 Unclassified 1826
118 Ga0207700_10236787 3300025928 Unclassified 1554
119 Ga0207644_10136762 3300025931 Bacteria 1882
120 Ga0207706_10246002 3300025933 Bacteria 1563
121 Ga0207670_10012802 3300025936 Bacteria 4922
122 Ga0207669_10052924 3300025937 Bacteria 2442
123 Ga0207704_10134004 3300025938 Bacteria 1721
124 Ga0207704_10236169 3300025938 Bacteria 1363
125 Ga0207691_10140535 3300025940 Bacteria 2128
126 Ga0207711_10357788 3300025941 Bacteria 1352
127 Ga0207668_10243971 3300025972 Bacteria 1455
128 Ga0207703_10406529 3300026035 Bacteria 1264
129 Ga0207678_10024435 3300026067 Bacteria 5276
130 Ga0207641_10319614 3300026088 Bacteria 1472
131 Ga0207676_10157815 3300026095 Bacteria 1962
132 Ga0207676_10159989 3300026095 Bacteria 1950
133 Ga0207675_100104407 3300026118 Bacteria 2671
134 Ga0207683_10144515 3300026121 Bacteria 2144
135 Ga0209813_10021155 3300027866 Bacteria 1826
136 Ga0268265_10229709 3300028380 Bacteria 1630
137 Ga0268264_10190528 3300028381 Bacteria 1869
138 Ga0265326_10025873 3300028558 Bacteria 1674
139 Ga0265338_10007467 3300028800 Bacteria 13554
140 Ga0265338_10042188 3300028800 Bacteria 4254
141 Ga0265338_10267918 3300028800 Unclassified 1253
142 Ga0265332_10020969 3300031238 Bacteria 2886
143 Ga0265329_10000529 3300031242 Bacteria 19689
144 Ga0307509_10466119 3300031507 Bacteria 954
145 Ga0307408_100510235 3300031548 Unclassified 1054
146 Ga0265314_10000046 3300031711 Bacteria 199789
147 Ga0307413_10000526 3300031824 Bacteria 12679
148 Ga0307413_10033900 3300031824 Unclassified 2913
149 Ga0307410_10131845 3300031852 Bacteria 1837
150 Ga0307406_10015481 3300031901 Bacteria 4415
151 Ga0307406_10020877 3300031901 Bacteria 3866
152 Ga0307407_10000630 3300031903 Bacteria 11287
153 Ga0307407_10276464 3300031903 Bacteria 1161
154 Ga0307407_10397049 3300031903 Bacteria 988
155 Ga0307412_10014366 3300031911 Bacteria 4668
156 Ga0307409_100002054 3300031995 Bacteria 10345
157 Ga0307409_100068612 3300031995 Unclassified 2805
158 Ga0307409_100483553 3300031995 Bacteria 1202
159 Ga0307414_10007156 3300032004 Bacteria 6260
160 Ga0307414_10079110 3300032004 Bacteria 2399
161 Ga0307411_10005440 3300032005 Bacteria 6256
162 Ga0307411_10217918 3300032005 Bacteria 1479
163 Ga0307415_100008622 3300032126 Bacteria 5664
164 Ga0307415_100336714 3300032126 Unclassified 1265
165 Ga0373936_0000009 3300035113 Bacteria 263478
166 Ga0373957_0177387 3300035120 Bacteria 882
167 Ga0373961_0000037 3300035241 Bacteria 79491
168 Ga0373924_0131327 3300035410 Bacteria 1090
169 Ga0373935_0109142 3300035692 Bacteria 1835
170 Ga0373933_0153803 3300035724 Bacteria 1458
171 Ga0373937_0571965 3300036401 Bacteria 1073
172 Ga0395905_0065264 3300037471 Unclassified 3408
173 Ga0436365_1672558 3300039437 Bacteria 52066
174 Ga0436363_1304792 3300039450 Bacteria 64778
175 Ga0436362_1297109 3300039453 Bacteria 9511
176 Ga0451791_1586552 3300041451 Bacteria 1100
177 Ga0451807_2216912 3300041486 Unclassified 2168
178 Ga0451837_0419975 3300041494 Unclassified 3087
179 Ga0439434_0100646 3300042435 Bacteria 931
180 Ga0451577_0008847 3300042876 Bacteria 9748
181 Ga0453684_0084677 3300044712 Bacteria 3942
182 Ga0453684_0106351 3300044712 Bacteria 3419
183 Ga0453684_0449800 3300044712 Bacteria 1434
184 Ga0466959_0037119 3300045049 Bacteria 3600
185 Ga0451576_0061151 3300045051 Bacteria 3928
186 Ga0451576_0145308 3300045051 Bacteria 2473
187 Ga0451576_0193000 3300045051 Bacteria 2127
188 Ga0466958_0022736 3300045836 Bacteria 3676
189 Ga0495638_0013428 3300046460 Bacteria 5576
190 Ga0495641_0088483 3300046461 Bacteria 1385
191 Ga0495653_0147259 3300046463 Bacteria 1649
192 Ga0495628_0426210 3300046516 Bacteria 966
193 Ga0495630_0019951 3300046517 Bacteria 4935
194 Ga0495634_0141894 3300046642 Bacteria 1525
195 Ga0495613_0112803 3300046689 Bacteria 1958
196 Ga0495674_0195217 3300047319 Bacteria 1681
197 Ga0495674_0323975 3300047319 Bacteria 1255
198 Ga0496104_0008922 3300048907 Bacteria 8911
199 Ga0496105_0003800 3300048908 Bacteria 11266
200 Ga0496108_0024120 3300048911 Bacteria 5008
201 Ga0496112_0026653 3300048915 Bacteria 5567
202 Ga0496115_0071884 3300048918 Bacteria 2806
203 Ga0501221_043378 3300049704 Bacteria 989
204 nmdc:mga03n38_160968_c1 3300050490 Bacteria 1136
205 nmdc:mga0k408_14130_c1 3300050493 Bacteria 4392
206 nmdc:mga06z11_8545_c1 3300050494 Bacteria 4280
207 nmdc:mga05p37_53628_c1 3300050507 Bacteria 4959
208 nmdc:mga05p37_776465_c1 3300050507 Bacteria 1052
209 nmdc:mga06r32_316731_c1 3300050510 Unclassified 1545
210 nmdc:mga06r32_53063_c1 3300050510 Bacteria 3883
211 nmdc:mga06r32_55543_c1 3300050510 Bacteria 3798
212 nmdc:mga08y16_215700_c1 3300050511 Bacteria 1987
213 nmdc:mga08y16_25209_c1 3300050511 Bacteria 6270
214 nmdc:mga08y16_296747_c1 3300050511 Bacteria 1666
215 nmdc:mga0rr50_37458_c1 3300050513 Unclassified 3501
216 nmdc:mga0a205_359256_c1 3300050515 Unclassified 1323
217 Ga0495595_0195272 3300053084 Bacteria 1006
218 Ga0500627_0089153 3300053158 Bacteria 1380
219 Ga0081455_10270624
220 JGI25406J46586_10003999
221 rootL2_10133287
222 Ga0065704_10086075
223 Ga0065712_10275837
224 Ga0065715_10014681
225 Ga0065707_10006748
226 Ga0065707_10119196
227 Ga0070690_100016726
228 Ga0070670_100245970
229 Ga0070677_10148794
230 Ga0068868_100275752
231 Ga0070689_100020342
232 Ga0070689_100044000
233 Ga0070689_100158155
234 Ga0070675_100000005
235 Ga0070675_100041217
236 Ga0070675_100439202
237 Ga0070671_100038538
238 Ga0070674_100018964
239 Ga0070673_100369021
240 Ga0070688_100008205
241 Ga0070688_100159798
242 Ga0070667_100367045
243 Ga0070714_100068154
244 Ga0070713_100388051
245 Ga0070705_100181252
246 Ga0070694_100035246
247 Ga0070694_100097284
248 Ga0070694_100386460
249 Ga0070708_100487091
250 Ga0070708_100574575
251 Ga0070663_100093854
252 Ga0070662_100084118
253 Ga0070662_100351440
254 Ga0070681_10129166
255 Ga0070681_10257754
256 Ga0070685_10126597
257 Ga0070698_100016720
258 Ga0070697_100000861
259 Ga0070672_100175752
260 Ga0070695_100203349
261 Ga0070665_100071681
262 Ga0070665_100387077
263 Ga0070704_100359402
264 Ga0070704_100421517
265 Ga0070664_100035448
266 Ga0068854_100140964
267 Ga0068859_100248802
268 Ga0068859_100549224
269 Ga0068864_100169281
270 Ga0068863_100519506
271 Ga0068858_100270055
272 Ga0068860_100006099
273 Ga0068860_100332712
274 Ga0068860_100498006
275 Ga0068862_100236005
276 Ga0068862_100508281
277 Ga0081539_10000230
278 Ga0081539_10000344
279 Ga0081539_10004502
280 Ga0070717_10016551
281 Ga0070717_10046019
282 Ga0070717_10061802
283 Ga0075363_100193029
284 Ga0075364_10067223
285 Ga0075364_10339078
286 Ga0070712_100101579
287 Ga0075367_10005882
288 Ga0075367_10192513
289 Ga0075366_10014105
290 Ga0068871_100785143
291 Ga0075428_100002519
292 Ga0075428_100006739
293 Ga0075428_100166615
294 Ga0075428_100192963
295 Ga0075431_100073592
296 Ga0075431_100388759
297 Ga0075433_10304426
298 Ga0068865_100048991
299 Ga0097620_100248787
300 Ga0097620_100549270
301 Ga0075435_100047552
302 Ga0111539_10029648
303 Ga0111539_10373890
304 Ga0114129_10007753
305 Ga0114129_10072157
306 Ga0114129_10207077
307 Ga0114129_10357054
308 Ga0114129_11000301
309 Ga0105242_10267654
310 Ga0105248_10287651
311 Ga0105237_10341495
312 Ga0105238_10310135
313 Ga0105249_10037688
314 Ga0105246_10319385
315 Ga0157375_10596077
316 Ga0163163_10083348
317 Ga0163163_10260436
318 Ga0163163_10577575
319 Ga0157380_10596202
320 Ga0157377_10355910
321 Ga0157376_10221367
322 Ga0157376_10435212
323 Ga0157376_10465943
324 Ga0163161_10227715
325 Ga0213874_10009665
326 Ga0213876_10006638
327 Ga0228598_1000995
328 Ga0207682_10020015
329 Ga0207695_10006595
330 Ga0207662_10387382
331 Ga0207652_10197960
332 Ga0207646_10344316
333 Ga0207659_10000067
334 Ga0207659_10116493
335 Ga0207659_10148860
336 Ga0207700_10236787
337 Ga0207644_10136762
338 Ga0207706_10246002
339 Ga0207670_10012802
340 Ga0207669_10052924
341 Ga0207704_10134004
342 Ga0207704_10236169
343 Ga0207691_10140535
344 Ga0207711_10357788
345 Ga0207668_10243971
346 Ga0207703_10406529
347 Ga0207678_10024435
348 Ga0207641_10319614
349 Ga0207676_10157815
350 Ga0207676_10159989
351 Ga0207675_100104407
352 Ga0207683_10144515
353 Ga0209813_10021155
354 Ga0268265_10229709
355 Ga0268264_10190528
356 Ga0265326_10025873
357 Ga0265338_10007467
358 Ga0265338_10042188
359 Ga0265338_10267918
360 Ga0265332_10020969
361 Ga0265329_10000529
362 Ga0307509_10466119
363 Ga0307408_100510235
364 Ga0265314_10000046
365 Ga0307413_10000526
366 Ga0307413_10033900
367 Ga0307410_10131845
368 Ga0307406_10015481
369 Ga0307406_10020877
370 Ga0307407_10000630
371 Ga0307407_10276464
372 Ga0307407_10397049
373 Ga0307412_10014366
374 Ga0307409_100002054
375 Ga0307409_100068612
376 Ga0307409_100483553
377 Ga0307414_10007156
378 Ga0307414_10079110
379 Ga0307411_10005440
380 Ga0307411_10217918
381 Ga0307415_100008622
382 Ga0307415_100336714
383 Ga0373936_0000009
384 Ga0373957_0177387
385 Ga0373961_0000037
386 Ga0373924_0131327
387 Ga0373935_0109142
388 Ga0373933_0153803
389 Ga0373937_0571965
390 Ga0395905_0065264
391 Ga0436365_1672558
392 Ga0436363_1304792
393 Ga0436362_1297109
394 Ga0451791_1586552
395 Ga0451807_2216912
396 Ga0451837_0419975
397 Ga0439434_0100646
398 Ga0451577_0008847
399 Ga0453684_0084677
400 Ga0453684_0106351
401 Ga0453684_0449800
402 Ga0466959_0037119
403 Ga0451576_0061151
404 Ga0451576_0145308
405 Ga0451576_0193000
406 Ga0466958_0022736
407 Ga0495638_0013428
408 Ga0495641_0088483
409 Ga0495653_0147259
410 Ga0495628_0426210
411 Ga0495630_0019951
412 Ga0495634_0141894
413 Ga0495613_0112803
414 Ga0495674_0195217
415 Ga0495674_0323975
416 Ga0496104_0008922
417 Ga0496105_0003800
418 Ga0496108_0024120
419 Ga0496112_0026653
420 Ga0496115_0071884
421 Ga0501221_043378
422 nmdc:mga03n38_160968_c1
423 nmdc:mga0k408_14130_c1
424 nmdc:mga06z11_8545_c1
425 nmdc:mga05p37_53628_c1
426 nmdc:mga05p37_776465_c1
427 nmdc:mga06r32_316731_c1
428 nmdc:mga06r32_53063_c1
429 nmdc:mga06r32_55543_c1
430 nmdc:mga08y16_215700_c1
431 nmdc:mga08y16_25209_c1
432 nmdc:mga08y16_296747_c1
433 nmdc:mga0rr50_37458_c1
434 nmdc:mga0a205_359256_c1
435 Ga0495595_0195272
436 Ga0500627_0089153

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04397

LytTR

LytTr DNA-binding domain

196

293

0.97

PF00072

Response_reg

Response regulator receiver domain

44

153

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ekh-assembly1.cif.gz_Y crystal structure of activated chey from methanoccocus maripaludis 0.9309 5 121
7od9-assembly1.cif.gz_B crystal structure of activated chey fused to the c-terminal domain of chef 0.9291 4 121
2qv0-assembly1.cif.gz_A crystal structure of the response regulatory domain of protein mrke from klebsiella pneumoniae 0.9116 8 129
6m8o-assembly1.cif.gz_A crystal structure of the receiver domain of lytr from staphylococcus aureus 0.9114 8 123
5w43-assembly1.cif.gz_A structure of the two-component response regulator rcsb-dna complex 0.9093 6 125
ID Description Score Start End Superfamily
6ekhY00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9309 5 121 3.40.50.2300
af_P0AFT5_1_126_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9297 7 124 3.40.50.2300
6m8oA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9114 8 123 3.40.50.2300
2qv0B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9112 8 129 3.40.50.2300
af_P0AFT5_129_238_2.40.50.1020 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);LytTr DNA-binding domain 0.9104 142 249 2.40.50.1020
ID Description Score Start End GO Terms
AF-A0A085L9R9-F1-model_v4 Stage 0 sporulation protein A homolog 0.9548 6 89 GO:0000160
AF-A0A519UEC9-F1-model_v4 Response regulator 0.953 7 129 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A4Q3FDX0-F1-model_v4 Response regulator 0.951 8 84 GO:0000160
AF-A0A7Y5G1H0-F1-model_v4 Response regulator 0.9428 4 84 GO:0000160
AF-A0A524E9T5-F1-model_v4 Response regulator 0.9338 3 122 GO:0000160

Map