F329178

General Info

Members Datasets Scaffolds Average Seq Length
217 130 434 259

Family's Representative Sequence

Representative Sequence 3300047320|Ga0495672_0006510|Ga0495672_0006510_3639_4466
Length 275
Sequence MDDVASNRSHSDTASDGASSRPVISVRNLRMGYGARMLLDDASFDVYRGEIVVILGGSGSGKSSLMKNIIGLHKPIAGDVLIDGASLVSASADEKAQLQRKLGVMYQSGALFGSMNVLENVRFPLDRFTSLALAQRNLAARMLLHAVEMAHAESLMPGELSGGMLKRAGISRAMALGCEILLLDEPSAGLDPITAANLDRTILALRRDLGVTVVVVTHELESIFAIADRAIMLDPVSRAIIADDKPSALRDHSSDARVHQFFNRQPDPLGAHRTR

Samples

Sample ID Description Type Environment
1 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
51 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
52 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
53 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
54 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
84 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
87 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
88 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
89 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
90 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
91 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
92 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
93 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
94 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
95 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
100 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
124 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
125 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
126 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
127 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
128 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
129 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
130 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.62
Metatranscriptomes 1.38
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.84
Nodule 0
Rhizoplane 1.84
Rhizosphere 86.64
Stem 0
Stem Tuber 0
Unclassified 5.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495672_0006510 3300047320 Bacteria 9026
2 JGI24740J21852_10075962 3300001979 Bacteria 889
3 Ga0070683_100076376 3300005329 Bacteria 3131
4 Ga0070670_100578178 3300005331 Bacteria 1004
5 Ga0068868_100478221 3300005338 Bacteria 1088
6 Ga0070689_100618471 3300005340 Bacteria 940
7 Ga0070691_10000440 3300005341 Bacteria 15358
8 Ga0070668_100394023 3300005347 Bacteria 1181
9 Ga0070671_100079025 3300005355 Bacteria 2749
10 Ga0070714_100019102 3300005435 Bacteria 5578
11 Ga0070714_100022899 3300005435 Bacteria 5126
12 Ga0070714_100055198 3300005435 Bacteria 3395
13 Ga0070714_100279616 3300005435 Bacteria 1550
14 Ga0070713_100021233 3300005436 Unclassified 4990
15 Ga0070713_100352997 3300005436 Bacteria 1365
16 Ga0070711_100049961 3300005439 Bacteria 2865
17 Ga0070711_100361337 3300005439 Bacteria 1169
18 Ga0070700_100128238 3300005441 Bacteria 1708
19 Ga0070663_100303893 3300005455 Bacteria 1278
20 Ga0070663_100396035 3300005455 Bacteria 1128
21 Ga0068867_100027536 3300005459 Bacteria 4086
22 Ga0068853_100082654 3300005539 Bacteria 2813
23 Ga0070686_100361674 3300005544 Bacteria 1093
24 Ga0070665_100077282 3300005548 Unclassified 3335
25 Ga0068855_100000448 3300005563 Bacteria 50961
26 Ga0068855_100026468 3300005563 Bacteria 6938
27 Ga0068854_100000018 3300005578 Bacteria 136417
28 Ga0068854_100373429 3300005578 Unclassified 1173
29 Ga0068856_100041303 3300005614 Bacteria 4532
30 Ga0068856_100422441 3300005614 Bacteria 1353
31 Ga0068859_100707758 3300005617 Bacteria 1098
32 Ga0068864_100603995 3300005618 Bacteria 1065
33 Ga0068866_10020982 3300005718 Bacteria 3002
34 Ga0081539_10013164 3300005985 Bacteria 6267
35 Ga0070715_10029172 3300006163 Bacteria 2220
36 Ga0070716_100043044 3300006173 Bacteria 2523
37 Ga0075428_100019303 3300006844 Bacteria 7545
38 Ga0075428_100170212 3300006844 Bacteria 2362
39 Ga0075428_100257118 3300006844 Bacteria 1881
40 Ga0075428_100648831 3300006844 Bacteria 1126
41 Ga0075431_100000717 3300006847 Bacteria 28547
42 Ga0075431_100184539 3300006847 Bacteria 2140
43 Ga0075433_10474814 3300006852 Bacteria 1102
44 Ga0075434_100180767 3300006871 Bacteria 2129
45 Ga0075429_100360093 3300006880 Bacteria 1274
46 Ga0075436_100107517 3300006914 Bacteria 1946
47 Ga0097620_100707694 3300006931 Bacteria 1098
48 Ga0075435_100355198 3300007076 Bacteria 1257
49 Ga0105240_10023504 3300009093 Bacteria 8148
50 Ga0111539_10013898 3300009094 Bacteria 10067
51 Ga0111539_10305775 3300009094 Bacteria 1850
52 Ga0111539_10597738 3300009094 Bacteria 1285
53 Ga0105247_10069331 3300009101 Bacteria 2200
54 Ga0114129_10029079 3300009147 Bacteria 7828
55 Ga0105241_10200652 3300009174 Bacteria 1666
56 Ga0105248_10011327 3300009177 Bacteria 9830
57 Ga0105249_10107403 3300009553 Bacteria 2634
58 Ga0105239_10221194 3300010375 Unclassified 2123
59 Ga0157374_10143381 3300013296 Bacteria 2319
60 Ga0157374_10318328 3300013296 Bacteria 1541
61 Ga0157378_10034158 3300013297 Bacteria 4498
62 Ga0163162_10313406 3300013306 Bacteria 1701
63 Ga0157375_10279051 3300013308 Bacteria 1834
64 Ga0157380_10243966 3300014326 Bacteria 1622
65 Ga0157379_10042937 3300014968 Bacteria 4038
66 Ga0213873_10007242 3300021358 Bacteria 2213
67 Ga0213872_10003988 3300021361 Bacteria 7962
68 Ga0213872_10007998 3300021361 Bacteria 5146
69 Ga0213872_10073004 3300021361 Bacteria 1546
70 Ga0213872_10093831 3300021361 Bacteria 1341
71 Ga0213874_10009466 3300021377 Bacteria 2409
72 Ga0213875_10000001 3300021388 Bacteria 2793540
73 Ga0213875_10002040 3300021388 Bacteria 12414
74 Ga0213875_10006175 3300021388 Bacteria 6321
75 Ga0213875_10212195 3300021388 Bacteria 911
76 Ga0213871_10025868 3300021441 Bacteria 1497
77 Ga0213871_10048498 3300021441 Bacteria 1158
78 Ga0207688_10142349 3300025901 Unclassified 1412
79 Ga0207685_10039911 3300025905 Bacteria 1746
80 Ga0207684_10046564 3300025910 Bacteria 3679
81 Ga0207695_10038539 3300025913 Bacteria 5143
82 Ga0207695_10280130 3300025913 Bacteria 1561
83 Ga0207693_10079467 3300025915 Bacteria 2567
84 Ga0207663_10016923 3300025916 Bacteria 4053
85 Ga0207660_10148711 3300025917 Bacteria 1798
86 Ga0207700_10078278 3300025928 Bacteria 2571
87 Ga0207700_10165031 3300025928 Unclassified 1842
88 Ga0207664_10015654 3300025929 Bacteria 5512
89 Ga0207664_10019663 3300025929 Bacteria 4996
90 Ga0207664_10067819 3300025929 Bacteria 2864
91 Ga0207669_10133574 3300025937 Bacteria 1710
92 Ga0207704_10084165 3300025938 Bacteria 2067
93 Ga0207665_10262132 3300025939 Bacteria 1281
94 Ga0207691_10203167 3300025940 Bacteria 1724
95 Ga0207661_10056698 3300025944 Bacteria 3146
96 Ga0207667_10000086 3300025949 Bacteria 150941
97 Ga0207667_10018885 3300025949 Bacteria 7713
98 Ga0207651_10485070 3300025960 Unclassified 1066
99 Ga0207668_10087327 3300025972 Bacteria 2281
100 Ga0207640_10000027 3300025981 Bacteria 137684
101 Ga0207677_10063363 3300026023 Bacteria 2570
102 Ga0207678_10171689 3300026067 Bacteria 1851
103 Ga0207708_10049915 3300026075 Bacteria 3186
104 Ga0207702_10153355 3300026078 Unclassified 2098
105 Ga0265356_1000410 3300028017 Bacteria 7761
106 Ga0268266_10247195 3300028379 Bacteria 1649
107 Ga0268266_10637249 3300028379 Bacteria 1025
108 Ga0307515_10174790 3300028794 Bacteria 2123
109 Ga0265338_10000370 3300028800 Bacteria 80574
110 Ga0265338_10032828 3300028800 Bacteria 5053
111 Ga0265338_10109486 3300028800 Bacteria 2229
112 Ga0265332_10021830 3300031238 Bacteria 2826
113 Ga0265325_10023380 3300031241 Bacteria 3375
114 Ga0265340_10113260 3300031247 Unclassified 1252
115 Ga0265340_10143057 3300031247 Bacteria 1093
116 Ga0265339_10017550 3300031249 Bacteria 4235
117 Ga0265313_10000130 3300031595 Bacteria 76026
118 Ga0316575_10000865 3300031665 Bacteria 9304
119 Ga0316575_10018353 3300031665 Bacteria 2665
120 Ga0316575_10021338 3300031665 Bacteria 2492
121 Ga0316579_10000833 3300031691 Bacteria 10652
122 Ga0316579_10017208 3300031691 Bacteria 3168
123 Ga0316579_10041947 3300031691 Bacteria 2124
124 Ga0316579_10175654 3300031691 Bacteria 1035
125 Ga0265342_10022567 3300031712 Bacteria 3999
126 Ga0316576_10010906 3300031727 Bacteria 5926
127 Ga0316576_10075080 3300031727 Bacteria 2500
128 Ga0316578_10003004 3300031728 Bacteria 7598
129 Ga0316578_10126860 3300031728 Bacteria 1535
130 Ga0316577_10005311 3300031733 Bacteria 6749
131 Ga0316583_10072910 3300032133 Bacteria 1201
132 Ga0316585_10001460 3300032137 Bacteria 6248
133 Ga0316585_10031156 3300032137 Bacteria 1676
134 Ga0316580_10000655 3300032139 Bacteria 8188
135 Ga0316580_10013392 3300032139 Bacteria 2499
136 Ga0316588_1001523 3300033528 Bacteria 3836
137 Ga0316588_1009601 3300033528 Bacteria 2022
138 Ga0316596_1009768 3300033541 Bacteria 2307
139 Ga0316574_0000958 3300035398 Bacteria 12921
140 Ga0316574_0002198 3300035398 Bacteria 9687
141 Ga0316574_0061270 3300035398 Bacteria 2362
142 Ga0316574_0113487 3300035398 Bacteria 1737
143 Ga0316574_0127801 3300035398 Bacteria 1634
144 Ga0373947_0152822 3300035725 Bacteria 1488
145 Ga0316582_0014020 3300036647 Bacteria 4534
146 Ga0316582_0053132 3300036647 Bacteria 2576
147 Ga0316584_0002261 3300036712 Bacteria 12110
148 Ga0316584_0009098 3300036712 Bacteria 6877
149 Ga0316584_0072603 3300036712 Bacteria 2579
150 Ga0316584_0082288 3300036712 Bacteria 2411
151 Ga0395899_0002001 3300037312 Bacteria 16780
152 Ga0395900_0031958 3300037418 Bacteria 5410
153 Ga0316581_0006790 3300037588 Bacteria 3046
154 Ga0436364_0006043 3300037853 Bacteria 919
155 Ga0436364_0144010 3300037853 Bacteria 17925
156 Ga0436364_0273345 3300037853 Bacteria 2794207
157 Ga0436364_1065751 3300037853 Unclassified 874
158 Ga0436364_1240195 3300037853 Bacteria 19345
159 Ga0436364_1253768 3300037853 Bacteria 842
160 Ga0436364_1280863 3300037853 Bacteria 8942
161 Ga0395901_0049177 3300038443 Bacteria 4380
162 Ga0436365_0292538 3300039437 Bacteria 19856
163 Ga0436365_1504487 3300039437 Bacteria 1933
164 Ga0436360_0286617 3300039438 Bacteria 1381
165 Ga0436360_0298568 3300039438 Bacteria 8053
166 Ga0436360_0446714 3300039438 Bacteria 3567
167 Ga0436360_0792052 3300039438 Bacteria 2869
168 Ga0436360_0937020 3300039438 Bacteria 2045
169 Ga0436360_1070150 3300039438 Bacteria 7695
170 Ga0436360_1278187 3300039438 Bacteria 2782
171 Ga0436360_1377899 3300039438 Bacteria 6878
172 Ga0436361_0079770 3300039447 Bacteria 5361
173 Ga0436361_0308977 3300039447 Bacteria 1179
174 Ga0436361_0541323 3300039447 Bacteria 6578
175 Ga0436361_0700265 3300039447 Bacteria 2547
176 Ga0436361_0947533 3300039447 Bacteria 5338
177 Ga0436361_1083470 3300039447 Bacteria 47595
178 Ga0436361_1200969 3300039447 Bacteria 7810
179 Ga0436361_1205610 3300039447 Bacteria 873
180 Ga0436363_0042158 3300039450 Bacteria 1763
181 Ga0436363_0127523 3300039450 Bacteria 9745
182 Ga0436363_0270795 3300039450 Bacteria 5703
183 Ga0436363_0706443 3300039450 Bacteria 36613
184 Ga0436362_0087702 3300039453 Bacteria 5634
185 Ga0436362_0402677 3300039453 Bacteria 2897
186 Ga0436362_0565983 3300039453 Bacteria 1937
187 Ga0436362_0664379 3300039453 Bacteria 3730
188 Ga0436362_0720368 3300039453 Bacteria 1371
189 Ga0436362_0943089 3300039453 Bacteria 3835
190 Ga0436362_1048522 3300039453 Bacteria 1189
191 Ga0436362_1250412 3300039453 Bacteria 919
192 Ga0466959_0126489 3300045049 Bacteria 1814
193 Ga0451576_0447922 3300045051 Bacteria 1355
194 Ga0466958_0009000 3300045836 Bacteria 5545
195 Ga0466958_0236304 3300045836 Bacteria 1167
196 Ga0496101_0429305 3300048904 Bacteria 1042
197 Ga0496108_0214811 3300048911 Bacteria 1670
198 Ga0496112_0083812 3300048915 Bacteria 3153
199 Ga0496113_0025562 3300048916 Bacteria 4211
200 Ga0496121_0050905 3300048924 Bacteria 3494
201 Ga0496121_0075612 3300048924 Bacteria 2690
202 nmdc:mga05p37_30340_c1 3300050507 Bacteria 6597
203 nmdc:mga09592_321294_c1 3300050508 Bacteria 1341
204 nmdc:mga09592_631990_c1 3300050508 Bacteria 915
205 nmdc:mga06r32_4234_c1 3300050510 Bacteria 11791
206 nmdc:mga06r32_758974_c1 3300050510 Bacteria 933
207 nmdc:mga08y16_115700_c1 3300050511 Bacteria 2792
208 nmdc:mga08y16_303552_c1 3300050511 Bacteria 1645
209 nmdc:mga0n895_72204_c1 3300050512 Bacteria 3424
210 nmdc:mga0rr50_283731_c1 3300050513 Bacteria 1382
211 nmdc:mga08x19_345598_c1 3300050514 Bacteria 1038
212 nmdc:mga0a205_218344_c1 3300050515 Bacteria 1793
213 nmdc:mga0a205_33721_c1 3300050515 Bacteria 4910
214 Ga0500583_0001482 3300053092 Bacteria 6752
215 Ga0500617_023826 3300053124 Bacteria 2708
216 Ga0500588_0009278 3300053146 Unclassified 2334
217 Ga0500622_0003259 3300053156 Bacteria 11013
218 Ga0495672_0006510
219 JGI24740J21852_10075962
220 Ga0070683_100076376
221 Ga0070670_100578178
222 Ga0068868_100478221
223 Ga0070689_100618471
224 Ga0070691_10000440
225 Ga0070668_100394023
226 Ga0070671_100079025
227 Ga0070714_100019102
228 Ga0070714_100022899
229 Ga0070714_100055198
230 Ga0070714_100279616
231 Ga0070713_100021233
232 Ga0070713_100352997
233 Ga0070711_100049961
234 Ga0070711_100361337
235 Ga0070700_100128238
236 Ga0070663_100303893
237 Ga0070663_100396035
238 Ga0068867_100027536
239 Ga0068853_100082654
240 Ga0070686_100361674
241 Ga0070665_100077282
242 Ga0068855_100000448
243 Ga0068855_100026468
244 Ga0068854_100000018
245 Ga0068854_100373429
246 Ga0068856_100041303
247 Ga0068856_100422441
248 Ga0068859_100707758
249 Ga0068864_100603995
250 Ga0068866_10020982
251 Ga0081539_10013164
252 Ga0070715_10029172
253 Ga0070716_100043044
254 Ga0075428_100019303
255 Ga0075428_100170212
256 Ga0075428_100257118
257 Ga0075428_100648831
258 Ga0075431_100000717
259 Ga0075431_100184539
260 Ga0075433_10474814
261 Ga0075434_100180767
262 Ga0075429_100360093
263 Ga0075436_100107517
264 Ga0097620_100707694
265 Ga0075435_100355198
266 Ga0105240_10023504
267 Ga0111539_10013898
268 Ga0111539_10305775
269 Ga0111539_10597738
270 Ga0105247_10069331
271 Ga0114129_10029079
272 Ga0105241_10200652
273 Ga0105248_10011327
274 Ga0105249_10107403
275 Ga0105239_10221194
276 Ga0157374_10143381
277 Ga0157374_10318328
278 Ga0157378_10034158
279 Ga0163162_10313406
280 Ga0157375_10279051
281 Ga0157380_10243966
282 Ga0157379_10042937
283 Ga0213873_10007242
284 Ga0213872_10003988
285 Ga0213872_10007998
286 Ga0213872_10073004
287 Ga0213872_10093831
288 Ga0213874_10009466
289 Ga0213875_10000001
290 Ga0213875_10002040
291 Ga0213875_10006175
292 Ga0213875_10212195
293 Ga0213871_10025868
294 Ga0213871_10048498
295 Ga0207688_10142349
296 Ga0207685_10039911
297 Ga0207684_10046564
298 Ga0207695_10038539
299 Ga0207695_10280130
300 Ga0207693_10079467
301 Ga0207663_10016923
302 Ga0207660_10148711
303 Ga0207700_10078278
304 Ga0207700_10165031
305 Ga0207664_10015654
306 Ga0207664_10019663
307 Ga0207664_10067819
308 Ga0207669_10133574
309 Ga0207704_10084165
310 Ga0207665_10262132
311 Ga0207691_10203167
312 Ga0207661_10056698
313 Ga0207667_10000086
314 Ga0207667_10018885
315 Ga0207651_10485070
316 Ga0207668_10087327
317 Ga0207640_10000027
318 Ga0207677_10063363
319 Ga0207678_10171689
320 Ga0207708_10049915
321 Ga0207702_10153355
322 Ga0265356_1000410
323 Ga0268266_10247195
324 Ga0268266_10637249
325 Ga0307515_10174790
326 Ga0265338_10000370
327 Ga0265338_10032828
328 Ga0265338_10109486
329 Ga0265332_10021830
330 Ga0265325_10023380
331 Ga0265340_10113260
332 Ga0265340_10143057
333 Ga0265339_10017550
334 Ga0265313_10000130
335 Ga0316575_10000865
336 Ga0316575_10018353
337 Ga0316575_10021338
338 Ga0316579_10000833
339 Ga0316579_10017208
340 Ga0316579_10041947
341 Ga0316579_10175654
342 Ga0265342_10022567
343 Ga0316576_10010906
344 Ga0316576_10075080
345 Ga0316578_10003004
346 Ga0316578_10126860
347 Ga0316577_10005311
348 Ga0316583_10072910
349 Ga0316585_10001460
350 Ga0316585_10031156
351 Ga0316580_10000655
352 Ga0316580_10013392
353 Ga0316588_1001523
354 Ga0316588_1009601
355 Ga0316596_1009768
356 Ga0316574_0000958
357 Ga0316574_0002198
358 Ga0316574_0061270
359 Ga0316574_0113487
360 Ga0316574_0127801
361 Ga0373947_0152822
362 Ga0316582_0014020
363 Ga0316582_0053132
364 Ga0316584_0002261
365 Ga0316584_0009098
366 Ga0316584_0072603
367 Ga0316584_0082288
368 Ga0395899_0002001
369 Ga0395900_0031958
370 Ga0316581_0006790
371 Ga0436364_0006043
372 Ga0436364_0144010
373 Ga0436364_0273345
374 Ga0436364_1065751
375 Ga0436364_1240195
376 Ga0436364_1253768
377 Ga0436364_1280863
378 Ga0395901_0049177
379 Ga0436365_0292538
380 Ga0436365_1504487
381 Ga0436360_0286617
382 Ga0436360_0298568
383 Ga0436360_0446714
384 Ga0436360_0792052
385 Ga0436360_0937020
386 Ga0436360_1070150
387 Ga0436360_1278187
388 Ga0436360_1377899
389 Ga0436361_0079770
390 Ga0436361_0308977
391 Ga0436361_0541323
392 Ga0436361_0700265
393 Ga0436361_0947533
394 Ga0436361_1083470
395 Ga0436361_1200969
396 Ga0436361_1205610
397 Ga0436363_0042158
398 Ga0436363_0127523
399 Ga0436363_0270795
400 Ga0436363_0706443
401 Ga0436362_0087702
402 Ga0436362_0402677
403 Ga0436362_0565983
404 Ga0436362_0664379
405 Ga0436362_0720368
406 Ga0436362_0943089
407 Ga0436362_1048522
408 Ga0436362_1250412
409 Ga0466959_0126489
410 Ga0451576_0447922
411 Ga0466958_0009000
412 Ga0466958_0236304
413 Ga0496101_0429305
414 Ga0496108_0214811
415 Ga0496112_0083812
416 Ga0496113_0025562
417 Ga0496121_0050905
418 Ga0496121_0075612
419 nmdc:mga05p37_30340_c1
420 nmdc:mga09592_321294_c1
421 nmdc:mga09592_631990_c1
422 nmdc:mga06r32_4234_c1
423 nmdc:mga06r32_758974_c1
424 nmdc:mga08y16_115700_c1
425 nmdc:mga08y16_303552_c1
426 nmdc:mga0n895_72204_c1
427 nmdc:mga0rr50_283731_c1
428 nmdc:mga08x19_345598_c1
429 nmdc:mga0a205_218344_c1
430 nmdc:mga0a205_33721_c1
431 Ga0500583_0001482
432 Ga0500617_023826
433 Ga0500588_0009278
434 Ga0500622_0003259

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

39

188

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9531 7 250
4u00-assembly1.cif.gz_A crystal structure of ttha1159 in complex with adp 0.9398 5 244
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9369 4 232
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9367 4 232
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9349 4 251
ID Description Score Start End Superfamily
af_P63386_5_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9641 4 249 3.40.50.300
af_P63386_5_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9565 4 249 3.40.50.300
af_P9WQL5_26_341_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.954 7 250 3.40.50.300
af_Q2G0D8_1_227_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9376 4 226 3.40.50.300
af_O05779_1_226_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9345 6 226 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2N7JK81-F1-model_v4 ABC transporter ATP-binding protein 0.9657 1 251 GO:0005524
GO:0016887
AF-A0A7U3VV78-F1-model_v4 deleted 0.9647 3 251
AF-A0A5C7SZM3-F1-model_v4 ABC transporter ATP-binding protein 0.9638 5 250 GO:0005524
GO:0005886
GO:0016887
AF-V4XXQ7-F1-model_v4 Putative ABC transporter ATP-binding protein 0.963 1 250 GO:0005524
GO:0005886
GO:0016887
AF-S0EXW4-F1-model_v4 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.963 4 244 GO:0005524
GO:0016887

Map