F328715

General Info

Members Datasets Scaffolds Average Seq Length
217 128 216 457

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10024114|Ga0114129_100241142
Length 516
Sequence MIPGPAGGVKRGVKLGSDPGLTPWLGSSELLISFQHSFTTGTQRFVYFQTTERSGATLRIALVSPKGPLYRHRGGIFKRSLRYAPLTLTTLAALTPRDLDPLFTLVDEGIEEIPAGLDVDIAGITVITGTAPRAYELAARLRRRGIPVVLGGPHVTLVPDDAQPHADSVVVGYAEDTWPALLRDFAGRRLQPRYVQAPGLSLAGRPFARRDLLPARRYLTTNVFEATRGCIHNCEFCVVPAAWGRKPYQKPVEEVVGDIWQHGARRLIFVDLNLIADREYAARLFEALIPLRVEWYGLSTVLLADDLPLLTLAARSGCRGLLLGFESIVASNLRDASKVFNRPQHFKRVVDLLHGHRIAVYGCFVFGMDHDTPEVFMETARFAVEARIDLPRFAVVTPFPGTALYQRLEREGRILTRNWELYDGQHVVFQPAQLTVRQLQEGTERAWRHVYSLSSIARRMRASPASPLVALGANLGYRHYAHNLNRFYNCDWMIQRRGQTADGSKAASPAAAAVAR

Samples

Sample ID Description Type Environment
1 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
84 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
85 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
95 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
96 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
97 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
98 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
99 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
107 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
108 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
109 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
110 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
113 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
116 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
117 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
120 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
124 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.54
Metatranscriptomes 0
Isolates 0.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.76
Nodule 0
Rhizoplane 0.46
Rhizosphere 95.39
Stem 0
Stem Tuber 0
Unclassified 1.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10252263 3300003322 Bacteria 2629
2 Ga0065715_10005103 3300005293 Bacteria 5554
3 Ga0070658_10000835 3300005327 Bacteria 26347
4 Ga0070670_100006503 3300005331 Bacteria 9893
5 Ga0068869_100052681 3300005334 Bacteria 2955
6 Ga0070689_100004516 3300005340 Bacteria 9424
7 Ga0070689_100004596 3300005340 Bacteria 9349
8 Ga0070689_100051100 3300005340 Bacteria 3195
9 Ga0070689_100075277 3300005340 Unclassified 2643
10 Ga0070669_100000022 3300005353 Bacteria 177723
11 Ga0070669_100146882 3300005353 Bacteria 1823
12 Ga0070673_100099474 3300005364 Bacteria 2392
13 Ga0070673_100158294 3300005364 Unclassified 1924
14 Ga0070688_100076416 3300005365 Bacteria 2155
15 Ga0070688_100104636 3300005365 Bacteria 1872
16 Ga0070701_10029046 3300005438 Unclassified 2723
17 Ga0070694_100059865 3300005444 Bacteria 2596
18 Ga0070707_100000467 3300005468 Bacteria 39947
19 Ga0070698_100000565 3300005471 Bacteria 39730
20 Ga0070698_100018059 3300005471 Bacteria 7426
21 Ga0070698_100214048 3300005471 Bacteria 1861
22 Ga0070699_100036211 3300005518 Bacteria 4269
23 Ga0070699_100084523 3300005518 Unclassified 2769
24 Ga0068853_100000028 3300005539 Bacteria 126479
25 Ga0068855_100028638 3300005563 Bacteria 6664
26 Ga0068855_100131654 3300005563 Bacteria 2856
27 Ga0068857_100013027 3300005577 Bacteria 7245
28 Ga0068857_100029994 3300005577 Unclassified 4799
29 Ga0068859_100107654 3300005617 Bacteria 2848
30 Ga0068858_100000667 3300005842 Bacteria 35901
31 Ga0068858_100180112 3300005842 Bacteria 1995
32 Ga0068860_100289222 3300005843 Unclassified 1603
33 Ga0068862_100001069 3300005844 Bacteria 26256
34 Ga0081455_10200313 3300005937 Bacteria 1495
35 Ga0070717_10000018 3300006028 Bacteria 195516
36 Ga0070716_100017780 3300006173 Bacteria 3692
37 Ga0075366_10116724 3300006195 Bacteria 1607
38 Ga0075370_10012412 3300006353 Bacteria 4500
39 Ga0075428_100002248 3300006844 Bacteria 20915
40 Ga0075428_100025900 3300006844 Bacteria 6495
41 Ga0075428_100083380 3300006844 Bacteria 3488
42 Ga0075430_100052290 3300006846 Bacteria 3440
43 Ga0075430_100084518 3300006846 Bacteria 2658
44 Ga0075430_100112310 3300006846 Bacteria 2272
45 Ga0075431_100003963 3300006847 Bacteria 14423
46 Ga0075431_100007209 3300006847 Bacteria 11060
47 Ga0075431_100091461 3300006847 Bacteria 3140
48 Ga0075431_100095382 3300006847 Bacteria 3071
49 Ga0075433_10008520 3300006852 Bacteria 8179
50 Ga0075433_10138036 3300006852 Bacteria 2167
51 Ga0075434_100061185 3300006871 Unclassified 3746
52 Ga0075429_100045744 3300006880 Bacteria 3808
53 Ga0075429_100064274 3300006880 Bacteria 3196
54 Ga0075429_100082245 3300006880 Unclassified 2807
55 Ga0075429_100140866 3300006880 Bacteria 2111
56 Ga0097620_100107642 3300006931 Bacteria 2848
57 Ga0075435_100048654 3300007076 Bacteria 3407
58 Ga0111539_10002476 3300009094 Bacteria 24500
59 Ga0111539_10006644 3300009094 Bacteria 14897
60 Ga0111539_10006863 3300009094 Bacteria 14627
61 Ga0111539_10027804 3300009094 Bacteria 6907
62 Ga0111539_10037780 3300009094 Bacteria 5828
63 Ga0111539_10043401 3300009094 Bacteria 5390
64 Ga0111539_10083962 3300009094 Bacteria 3745
65 Ga0105245_10004230 3300009098 Bacteria 12739
66 Ga0105245_10031299 3300009098 Unclassified 4708
67 Ga0114129_10006842 3300009147 Bacteria 16205
68 Ga0114129_10024114 3300009147 Bacteria 8621
69 Ga0114129_10035875 3300009147 Bacteria 7003
70 Ga0114129_10062005 3300009147 Bacteria 5224
71 Ga0114129_10160800 3300009147 Bacteria 3068
72 Ga0114129_10223235 3300009147 Bacteria 2541
73 Ga0114129_10484961 3300009147 Unclassified 1617
74 Ga0105243_10149885 3300009148 Unclassified 2000
75 Ga0105248_10047480 3300009177 Bacteria 4815
76 Ga0105248_10341228 3300009177 Unclassified 1686
77 Ga0105237_10010363 3300009545 Bacteria 9923
78 Ga0105237_10044015 3300009545 Bacteria 4496
79 Ga0105238_10003104 3300009551 Bacteria 16568
80 Ga0105238_10007809 3300009551 Bacteria 10700
81 Ga0105249_10019764 3300009553 Bacteria 6013
82 Ga0157374_10102716 3300013296 Bacteria 2742
83 Ga0163162_10006079 3300013306 Bacteria 11687
84 Ga0157380_10001622 3300014326 Bacteria 14830
85 Ga0157380_10034124 3300014326 Bacteria 3923
86 Ga0207705_10003099 3300025909 Bacteria 12675
87 Ga0207671_10006989 3300025914 Bacteria 9901
88 Ga0207646_10001024 3300025922 Bacteria 35711
89 Ga0207681_10000033 3300025923 Bacteria 166731
90 Ga0207694_10001892 3300025924 Bacteria 17356
91 Ga0207650_10010307 3300025925 Bacteria 6406
92 Ga0207687_10022822 3300025927 Bacteria 4168
93 Ga0207687_10039873 3300025927 Unclassified 3217
94 Ga0207687_10053942 3300025927 Bacteria 2810
95 Ga0207709_10131093 3300025935 Unclassified 1709
96 Ga0207670_10002644 3300025936 Bacteria 9425
97 Ga0207670_10013343 3300025936 Unclassified 4840
98 Ga0207691_10026523 3300025940 Bacteria 5436
99 Ga0207711_10081262 3300025941 Bacteria 2832
100 Ga0207679_10097151 3300025945 Unclassified 2294
101 Ga0207667_10062423 3300025949 Bacteria 3896
102 Ga0207651_10089211 3300025960 Unclassified 2250
103 Ga0207712_10009435 3300025961 Bacteria 6175
104 Ga0207703_10000134 3300026035 Bacteria 90044
105 Ga0207639_10000070 3300026041 Bacteria 95428
106 Ga0207702_10039185 3300026078 Bacteria 3970
107 Ga0207674_10017720 3300026116 Bacteria 7761
108 Ga0207674_10019960 3300026116 Bacteria 7251
109 Ga0207675_100055153 3300026118 Bacteria 3707
110 Ga0207428_10001760 3300027907 Bacteria 22199
111 Ga0207428_10012495 3300027907 Bacteria 7458
112 Ga0207428_10028555 3300027907 Unclassified 4634
113 Ga0207428_10039357 3300027907 Bacteria 3840
114 Ga0268265_10000359 3300028380 Bacteria 49295
115 Ga0265319_1000145 3300028563 Bacteria 52394
116 Ga0265319_1000784 3300028563 Bacteria 20582
117 Ga0265338_10000008 3300028800 Bacteria 481542
118 Ga0265338_10029045 3300028800 Bacteria 5496
119 Ga0265320_10000419 3300031240 Bacteria 33711
120 Ga0265320_10007304 3300031240 Bacteria 6868
121 Ga0265320_10033813 3300031240 Bacteria 2607
122 Ga0265327_10005916 3300031251 Bacteria 9990
123 Ga0307408_100060863 3300031548 Bacteria 2754
124 Ga0307508_10030283 3300031616 Bacteria 4891
125 Ga0265314_10000284 3300031711 Bacteria 73660
126 Ga0265314_10059023 3300031711 Bacteria 2627
127 Ga0316576_10034095 3300031727 Bacteria 3628
128 Ga0307405_10024966 3300031731 Unclassified 3424
129 Ga0307406_10018507 3300031901 Unclassified 4072
130 Ga0307412_10042644 3300031911 Bacteria 2950
131 Ga0307412_10072496 3300031911 Unclassified 2354
132 Ga0307416_100247904 3300032002 Bacteria 1731
133 Ga0307414_10072358 3300032004 Unclassified 2490
134 Ga0307411_10076062 3300032005 Unclassified 2294
135 Ga0373940_0008448 3300035088 Unclassified 2362
136 Ga0316574_0027982 3300035398 Bacteria 3397
137 Ga0316574_0077948 3300035398 Bacteria 2101
138 Ga0316584_0089245 3300036712 Unclassified 2308
139 Ga0395905_0016179 3300037471 Bacteria 7089
140 Ga0395905_0088245 3300037471 Unclassified 2907
141 Ga0400489_37435 3300039093 Bacteria 8878
142 Ga0451577_0114494 3300042876 Bacteria 2414
143 Ga0451577_0204880 3300042876 Bacteria 1781
144 Ga0453684_0000125 3300044712 Bacteria 336972
145 Ga0453684_0026149 3300044712 Bacteria 8444
146 Ga0453684_0067580 3300044712 Bacteria 4544
147 Ga0453684_0107875 3300044712 Unclassified 3390
148 Ga0451576_0049930 3300045051 Unclassified 4390
149 Ga0451576_0055430 3300045051 Bacteria 4147
150 Ga0495638_0011255 3300046460 Bacteria 6172
151 Ga0495580_0073682 3300046472 Bacteria 2384
152 Ga0495630_0001237 3300046517 Bacteria 17630
153 Ga0495665_0064710 3300046531 Unclassified 1930
154 Ga0495659_0023241 3300046664 Bacteria 2105
155 Ga0495624_0008760 3300046690 Bacteria 7038
156 Ga0495674_0001166 3300047319 Bacteria 25340
157 Ga0495684_0021332 3300047471 Bacteria 4987
158 Ga0496114_0000203 3300048917 Bacteria 43483
159 Ga0501034_0000289 3300049571 Bacteria 89918
160 Ga0501040_0029778 3300049576 Bacteria 3685
161 Ga0501041_0009672 3300049577 Bacteria 5684
162 Ga0501041_0045257 3300049577 Bacteria 2675
163 Ga0501042_0002408 3300049578 Bacteria 11463
164 Ga0501046_0152895 3300049580 Bacteria 1740
165 Ga0501047_0075428 3300049581 Bacteria 3245
166 Ga0501072_0061897 3300049588 Bacteria 2952
167 Ga0501075_0000809 3300049591 Bacteria 19576
168 Ga0501075_0001936 3300049591 Bacteria 13655
169 Ga0501075_0041453 3300049591 Bacteria 3450
170 Ga0501075_0073732 3300049591 Bacteria 2581
171 Ga0501076_0030854 3300049592 Bacteria 4176
172 Ga0501076_0061703 3300049592 Bacteria 2984
173 Ga0501077_0000043 3300049593 Bacteria 64691
174 Ga0501077_0022175 3300049593 Bacteria 4022
175 Ga0501079_0184197 3300049741 Bacteria 1630
176 Ga0501080_0014780 3300049742 Bacteria 7190
177 Ga0501081_0114041 3300049743 Bacteria 1920
178 Ga0501081_0160598 3300049743 Bacteria 1619
179 Ga0501083_0063131 3300049744 Bacteria 2471
180 Ga0501044_0003798 3300049823 Bacteria 16955
181 Ga0501044_0009759 3300049823 Bacteria 10443
182 Ga0501044_0019067 3300049823 Bacteria 7344
183 Ga0501045_0005285 3300049824 Bacteria 8942
184 nmdc:mga0k408_11465_c1 3300050493 Bacteria 4829
185 nmdc:mga07m45_35366_c1 3300050496 Bacteria 2778
186 nmdc:mga05p37_18336_c1 3300050507 Bacteria 8452
187 nmdc:mga05p37_183513_c1 3300050507 Bacteria 2544
188 nmdc:mga05p37_225877_c1 3300050507 Bacteria 2258
189 nmdc:mga05p37_41115_c1 3300050507 Bacteria 5677
190 nmdc:mga09592_245372_c1 3300050508 Bacteria 1552
191 nmdc:mga09592_59973_c1 3300050508 Bacteria 3217
192 nmdc:mga09592_60422_c1 3300050508 Bacteria 3204
193 nmdc:mga09592_90765_c1 3300050508 Unclassified 2610
194 nmdc:mga0qj67_12704_c1 3300050509 Bacteria 6351
195 nmdc:mga0qj67_9782_c1 3300050509 Bacteria 7146
196 nmdc:mga06r32_11640_c1 3300050510 Bacteria 7919
197 nmdc:mga06r32_129543_c1 3300050510 Bacteria 2494
198 nmdc:mga06r32_37432_c1 3300050510 Bacteria 4588
199 nmdc:mga06r32_47931_c1 3300050510 Bacteria 4083
200 nmdc:mga08y16_113599_c1 3300050511 Bacteria 2819
201 nmdc:mga08y16_169274_c1 3300050511 Bacteria 2269
202 nmdc:mga08y16_22073_c1 3300050511 Bacteria 6721
203 nmdc:mga08y16_30383_c1 3300050511 Bacteria 5687
204 nmdc:mga08y16_4265_c1 3300050511 Bacteria 14929
205 nmdc:mga08y16_51824_c1 3300050511 Bacteria 4295
206 nmdc:mga0n895_1340_c1 3300050512 Bacteria 18244
207 nmdc:mga0n895_46924_c1 3300050512 Bacteria 4222
208 nmdc:mga08x19_36_c1 3300050514 Bacteria 179752
209 nmdc:mga0a205_100558_c1 3300050515 Bacteria 2790
210 nmdc:mga0a205_11086_c1 3300050515 Bacteria 8294
211 nmdc:mga0a205_12987_c2 3300050515 Bacteria 6931
212 Ga0500641_0005847 3300053096 Bacteria 4355
213 Ga0500616_0000362 3300053153 Bacteria 64313
214 Ga0501082_0000791 3300060353 Bacteria 27835
215 Ga0501082_0026006 3300060353 Bacteria 5045
216 Ga0501082_0096319 3300060353 Bacteria 2558

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050508 nmdc:mga09592_245372_c1 nmdc:mga09592_245372_c1_32_1282 392
2 3300049593 Ga0501077_0022175 Ga0501077_0022175_2775_4001 407
3 3300049741 Ga0501079_0184197 Ga0501079_0184197_11_1237 407
4 3300049580 Ga0501046_0152895 Ga0501046_0152895_384_1646 415
5 3300005331 Ga0070670_100006503 Ga0070670_1000065035 417
6 3300005577 Ga0068857_100029994 Ga0068857_1000299942 417
7 3300025925 Ga0207650_10010307 Ga0207650_100103076 417
8 3300025945 Ga0207679_10097151 Ga0207679_100971511 417
9 3300026116 Ga0207674_10017720 Ga0207674_100177203 417
10 3300027907 Ga0207428_10039357 Ga0207428_100393572 417
11 3300006852 Ga0075433_10138036 Ga0075433_101380362 423
12 3300027907 Ga0207428_10028555 Ga0207428_100285554 424
13 3300014326 Ga0157380_10001622 Ga0157380_1000162210 429
14 3300009098 Ga0105245_10031299 Ga0105245_100312995 430
15 3300042876 Ga0451577_0204880 Ga0451577_0204880_421_1752 431
16 3300042876 Ga0451577_0114494 Ga0451577_0114494_44_1438 433
17 3300006844 Ga0075428_100002248 Ga0075428_10000224816 436
18 3300006847 Ga0075431_100003963 Ga0075431_1000039632 436
19 3300006880 Ga0075429_100045744 Ga0075429_1000457442 436
20 3300009147 Ga0114129_10006842 Ga0114129_1000684212 436
21 3300050508 nmdc:mga09592_60422_c1 nmdc:mga09592_60422_c1_1033_2364 436
22 3300050509 nmdc:mga0qj67_9782_c1 nmdc:mga0qj67_9782_c1_3214_4545 436
23 3300050510 nmdc:mga06r32_11640_c1 nmdc:mga06r32_11640_c1_5112_6443 436
24 3300049588 Ga0501072_0061897 Ga0501072_0061897_1216_2559 437
25 3300049591 Ga0501075_0041453 Ga0501075_0041453_1700_3043 437
26 3300049743 Ga0501081_0114041 Ga0501081_0114041_401_1744 437
27 3300060353 Ga0501082_0096319 Ga0501082_0096319_83_1426 437
28 3300005471 Ga0070698_100214048 Ga0070698_1002140482 438
29 3300005937 Ga0081455_10200313 Ga0081455_102003131 438
30 3300009147 Ga0114129_10484961 Ga0114129_104849612 438
31 3300049577 Ga0501041_0045257 Ga0501041_0045257_699_2066 438
32 3300049578 Ga0501042_0002408 Ga0501042_0002408_1046_2413 438
33 3300049592 Ga0501076_0061703 Ga0501076_0061703_995_2362 438
34 3300049581 Ga0501047_0075428 Ga0501047_0075428_612_1931 439
35 3300050512 nmdc:mga0n895_1340_c1 nmdc:mga0n895_1340_c1_16263_17681 439
36 3300050515 nmdc:mga0a205_100558_c1 nmdc:mga0a205_100558_c1_781_2199 439
37 3300005340 Ga0070689_100004596 Ga0070689_1000045964 440
38 3300005842 Ga0068858_100000667 Ga0068858_10000066717 440
39 3300006195 Ga0075366_10116724 Ga0075366_101167241 440
40 3300006353 Ga0075370_10012412 Ga0075370_100124125 440
41 3300009098 Ga0105245_10004230 Ga0105245_1000423012 440
42 3300009545 Ga0105237_10044015 Ga0105237_100440154 440
43 3300025927 Ga0207687_10022822 Ga0207687_100228222 440
44 3300025936 Ga0207670_10002644 Ga0207670_100026445 440
45 3300026035 Ga0207703_10000134 Ga0207703_1000013472 440
46 3300031251 Ga0265327_10005916 Ga0265327_100059168 440
47 3300031616 Ga0307508_10030283 Ga0307508_100302831 440
48 3300035088 Ga0373940_0008448 Ga0373940_0008448_798_2171 440
49 3300037471 Ga0395905_0088245 Ga0395905_0088245_697_2019 440
50 3300048917 Ga0496114_0000203 Ga0496114_0000203_37429_38760 440
51 3300050493 nmdc:mga0k408_11465_c1 nmdc:mga0k408_11465_c1_3137_4528 440
52 3300050496 nmdc:mga07m45_35366_c1 nmdc:mga07m45_35366_c1_316_1707 440
53 3300050511 nmdc:mga08y16_30383_c1 nmdc:mga08y16_30383_c1_2645_3979 440
54 3300006846 Ga0075430_100112310 Ga0075430_1001123102 441
55 3300035398 Ga0316574_0027982 Ga0316574_0027982_454_1800 441
56 3300036712 Ga0316584_0089245 Ga0316584_0089245_400_1746 441
57 3300037471 Ga0395905_0016179 Ga0395905_0016179_454_1854 441
58 3300053096 Ga0500641_0005847 Ga0500641_0005847_1616_3058 441
59 3300005334 Ga0068869_100052681 Ga0068869_1000526812 442
60 3300025927 Ga0207687_10039873 Ga0207687_100398732 442
61 3300046460 Ga0495638_0011255 Ga0495638_0011255_2349_3707 442
62 3300013306 Ga0163162_10006079 Ga0163162_100060796 443
63 3300031727 Ga0316576_10034095 Ga0316576_100340953 443
64 3300035398 Ga0316574_0077948 Ga0316574_0077948_63_1394 443
65 3300046664 Ga0495659_0023241 Ga0495659_0023241_374_1750 443
66 iso_pu_bacteria 2894772417 2894774295 443
67 3300005293 Ga0065715_10005103 Ga0065715_100051032 444
68 3300006852 Ga0075433_10008520 Ga0075433_100085204 444
69 3300044712 Ga0453684_0026149 Ga0453684_0026149_3478_4824 444
70 3300050515 nmdc:mga0a205_11086_c1 nmdc:mga0a205_11086_c1_3774_5126 444
71 3300005843 Ga0068860_100289222 Ga0068860_1002892221 445
72 3300009094 Ga0111539_10002476 Ga0111539_100024765 445
73 3300027907 Ga0207428_10001760 Ga0207428_1000176013 445
74 3300032002 Ga0307416_100247904 Ga0307416_1002479042 445
75 3300032004 Ga0307414_10072358 Ga0307414_100723582 445
76 3300032005 Ga0307411_10076062 Ga0307411_100760622 445
77 3300050511 nmdc:mga08y16_51824_c1 nmdc:mga08y16_51824_c1_1023_2414 445
78 3300005353 Ga0070669_100000022 Ga0070669_10000002247 446
79 3300005844 Ga0068862_100001069 Ga0068862_10000106916 446
80 3300006871 Ga0075434_100061185 Ga0075434_1000611852 446
81 3300009147 Ga0114129_10223235 Ga0114129_102232352 446
82 3300009177 Ga0105248_10047480 Ga0105248_100474802 446
83 3300013296 Ga0157374_10102716 Ga0157374_101027162 446
84 3300025923 Ga0207681_10000033 Ga0207681_1000003314 446
85 3300025941 Ga0207711_10081262 Ga0207711_100812622 446
86 3300028380 Ga0268265_10000359 Ga0268265_1000035932 446
87 3300039093 Ga0400489_37435 Ga0400489_37435_2846_4231 446
88 3300049591 Ga0501075_0000809 Ga0501075_0000809_13119_14468 446
89 3300049593 Ga0501077_0000043 Ga0501077_0000043_28013_29362 446
90 3300050507 nmdc:mga05p37_183513_c1 nmdc:mga05p37_183513_c1_806_2167 446
91 3300050510 nmdc:mga06r32_47931_c1 nmdc:mga06r32_47931_c1_433_1839 446
92 3300050512 nmdc:mga0n895_46924_c1 nmdc:mga0n895_46924_c1_1884_3227 446
93 3300050514 nmdc:mga08x19_36_c1 nmdc:mga08x19_36_c1_90934_92283 446
94 3300050515 nmdc:mga0a205_12987_c2 nmdc:mga0a205_12987_c2_5233_6621 446
95 3300060353 Ga0501082_0000791 Ga0501082_0000791_19594_20943 446
96 3300009094 Ga0111539_10006863 Ga0111539_100068632 447
97 3300027907 Ga0207428_10012495 Ga0207428_100124956 447
98 3300031731 Ga0307405_10024966 Ga0307405_100249662 447
99 3300044712 Ga0453684_0000125 Ga0453684_0000125_197495_198850 447
100 3300049576 Ga0501040_0029778 Ga0501040_0029778_2318_3664 447
101 3300049591 Ga0501075_0001936 Ga0501075_0001936_8945_10291 447
102 3300049591 Ga0501075_0073732 Ga0501075_0073732_668_2140 447
103 3300049592 Ga0501076_0030854 Ga0501076_0030854_2558_4030 447
104 3300049743 Ga0501081_0160598 Ga0501081_0160598_49_1395 447
105 3300049823 Ga0501044_0003798 Ga0501044_0003798_4752_6182 447
106 3300050511 nmdc:mga08y16_4265_c1 nmdc:mga08y16_4265_c1_1498_2844 447
107 3300005364 Ga0070673_100158294 Ga0070673_1001582942 448
108 3300006173 Ga0070716_100017780 Ga0070716_1000177803 448
109 3300006846 Ga0075430_100084518 Ga0075430_1000845182 448
110 3300028800 Ga0265338_10029045 Ga0265338_100290452 448
111 3300031711 Ga0265314_10059023 Ga0265314_100590232 448
112 3300044712 Ga0453684_0067580 Ga0453684_0067580_680_2041 448
113 3300006847 Ga0075431_100007209 Ga0075431_1000072096 449
114 3300006880 Ga0075429_100140866 Ga0075429_1001408662 449
115 3300009094 Ga0111539_10083962 Ga0111539_100839624 449
116 3300009147 Ga0114129_10062005 Ga0114129_100620052 449
117 3300045051 Ga0451576_0049930 Ga0451576_0049930_1524_2906 449
118 3300045051 Ga0451576_0055430 Ga0451576_0055430_2005_3387 449
119 3300049744 Ga0501083_0063131 Ga0501083_0063131_101_1483 449
120 3300050507 nmdc:mga05p37_225877_c1 nmdc:mga05p37_225877_c1_316_1698 449
121 3300050509 nmdc:mga0qj67_12704_c1 nmdc:mga0qj67_12704_c1_3481_4863 449
122 3300050510 nmdc:mga06r32_129543_c1 nmdc:mga06r32_129543_c1_561_1943 449
123 3300050511 nmdc:mga08y16_113599_c1 nmdc:mga08y16_113599_c1_206_1558 449
124 3300005327 Ga0070658_10000835 Ga0070658_100008359 450
125 3300005539 Ga0068853_100000028 Ga0068853_10000002833 450
126 3300006844 Ga0075428_100025900 Ga0075428_1000259002 450
127 3300006880 Ga0075429_100082245 Ga0075429_1000822452 450
128 3300009094 Ga0111539_10043401 Ga0111539_100434013 450
129 3300009147 Ga0114129_10035875 Ga0114129_100358753 450
130 3300009545 Ga0105237_10010363 Ga0105237_100103635 450
131 3300025909 Ga0207705_10003099 Ga0207705_100030993 450
132 3300025914 Ga0207671_10006989 Ga0207671_100069896 450
133 3300026041 Ga0207639_10000070 Ga0207639_1000007067 450
134 3300049742 Ga0501080_0014780 Ga0501080_0014780_3447_4814 450
135 3300049824 Ga0501045_0005285 Ga0501045_0005285_1021_2493 450
136 3300050507 nmdc:mga05p37_41115_c1 nmdc:mga05p37_41115_c1_1948_3303 450
137 3300050508 nmdc:mga09592_90765_c1 nmdc:mga09592_90765_c1_452_1807 450
138 3300005353 Ga0070669_100146882 Ga0070669_1001468822 451
139 3300005364 Ga0070673_100099474 Ga0070673_1000994743 451
140 3300005365 Ga0070688_100076416 Ga0070688_1000764162 451
141 3300005471 Ga0070698_100000565 Ga0070698_10000056530 451
142 3300005518 Ga0070699_100036211 Ga0070699_1000362113 451
143 3300005617 Ga0068859_100107654 Ga0068859_1001076542 451
144 3300005842 Ga0068858_100180112 Ga0068858_1001801122 451
145 3300006846 Ga0075430_100052290 Ga0075430_1000522902 451
146 3300006847 Ga0075431_100095382 Ga0075431_1000953822 451
147 3300006931 Ga0097620_100107642 Ga0097620_1001076422 451
148 3300007076 Ga0075435_100048654 Ga0075435_1000486542 451
149 3300009094 Ga0111539_10027804 Ga0111539_100278044 451
150 3300009177 Ga0105248_10341228 Ga0105248_103412282 451
151 3300014326 Ga0157380_10034124 Ga0157380_100341241 451
152 3300025960 Ga0207651_10089211 Ga0207651_100892113 451
153 3300026118 Ga0207675_100055153 Ga0207675_1000551533 451
154 3300028563 Ga0265319_1000784 Ga0265319_10007848 451
155 3300031240 Ga0265320_10000419 Ga0265320_100004195 451
156 3300031548 Ga0307408_100060863 Ga0307408_1000608632 451
157 3300031901 Ga0307406_10018507 Ga0307406_100185072 451
158 3300031911 Ga0307412_10042644 Ga0307412_100426442 451
159 3300044712 Ga0453684_0107875 Ga0453684_0107875_679_2103 451
160 3300049577 Ga0501041_0009672 Ga0501041_0009672_2191_3663 451
161 3300050511 nmdc:mga08y16_169274_c1 nmdc:mga08y16_169274_c1_265_1620 451
162 3300060353 Ga0501082_0026006 Ga0501082_0026006_1003_2475 451
163 3300005340 Ga0070689_100051100 Ga0070689_1000511002 452
164 3300005365 Ga0070688_100104636 Ga0070688_1001046362 452
165 3300005438 Ga0070701_10029046 Ga0070701_100290462 452
166 3300005444 Ga0070694_100059865 Ga0070694_1000598651 452
167 3300005471 Ga0070698_100018059 Ga0070698_1000180595 452
168 3300006847 Ga0075431_100091461 Ga0075431_1000914613 452
169 3300006880 Ga0075429_100064274 Ga0075429_1000642741 452
170 3300009094 Ga0111539_10006644 Ga0111539_100066447 452
171 3300009147 Ga0114129_10024114 Ga0114129_100241142 452
172 3300009147 Ga0114129_10160800 Ga0114129_101608002 452
173 3300009148 Ga0105243_10149885 Ga0105243_101498852 452
174 3300009553 Ga0105249_10019764 Ga0105249_100197643 452
175 3300025935 Ga0207709_10131093 Ga0207709_101310931 452
176 3300025961 Ga0207712_10009435 Ga0207712_100094353 452
177 3300028563 Ga0265319_1000145 Ga0265319_100014537 452
178 3300031240 Ga0265320_10007304 Ga0265320_100073042 452
179 3300031711 Ga0265314_10000284 Ga0265314_1000028428 452
180 3300049571 Ga0501034_0000289 Ga0501034_0000289_35562_36959 452
181 3300049823 Ga0501044_0009759 Ga0501044_0009759_5172_6611 452
182 3300050507 nmdc:mga05p37_18336_c1 nmdc:mga05p37_18336_c1_853_2403 452
183 3300050508 nmdc:mga09592_59973_c1 nmdc:mga09592_59973_c1_1009_2385 452
184 3300050510 nmdc:mga06r32_37432_c1 nmdc:mga06r32_37432_c1_1989_3365 452
185 3300005563 Ga0068855_100131654 Ga0068855_1001316542 453
186 3300009551 Ga0105238_10003104 Ga0105238_100031046 453
187 3300009551 Ga0105238_10007809 Ga0105238_100078093 453
188 3300025924 Ga0207694_10001892 Ga0207694_100018924 453
189 3300026078 Ga0207702_10039185 Ga0207702_100391852 453
190 3300031240 Ga0265320_10033813 Ga0265320_100338131 453
191 3300028800 Ga0265338_10000008 Ga0265338_10000008127 454
192 3300005340 Ga0070689_100004516 Ga0070689_1000045163 455
193 3300025936 Ga0207670_10013343 Ga0207670_100133431 455
194 3300006844 Ga0075428_100083380 Ga0075428_1000833803 456
195 3300009094 Ga0111539_10037780 Ga0111539_100377804 456
196 3300025927 Ga0207687_10053942 Ga0207687_100539421 456
197 3300025940 Ga0207691_10026523 Ga0207691_100265232 456
198 3300050511 nmdc:mga08y16_22073_c1 nmdc:mga08y16_22073_c1_3916_5391 456
199 3300053153 Ga0500616_0000362 Ga0500616_0000362_52198_53625 456
200 3300046472 Ga0495580_0073682 Ga0495580_0073682_802_2286 457
201 3300046517 Ga0495630_0001237 Ga0495630_0001237_10537_12021 457
202 3300046531 Ga0495665_0064710 Ga0495665_0064710_253_1737 457
203 3300046690 Ga0495624_0008760 Ga0495624_0008760_4950_6434 457
204 3300047319 Ga0495674_0001166 Ga0495674_0001166_4435_5919 457
205 3300047471 Ga0495684_0021332 Ga0495684_0021332_37_1521 457
206 3300005563 Ga0068855_100028638 Ga0068855_1000286382 458
207 3300006028 Ga0070717_10000018 Ga0070717_10000018112 458
208 3300025949 Ga0207667_10062423 Ga0207667_100624232 458
209 3300031911 Ga0307412_10072496 Ga0307412_100724961 458
210 3300003322 rootL2_10252263 rootL2_102522632 459
211 3300005340 Ga0070689_100075277 Ga0070689_1000752772 459
212 3300005468 Ga0070707_100000467 Ga0070707_10000046715 459
213 3300005518 Ga0070699_100084523 Ga0070699_1000845231 459
214 3300005577 Ga0068857_100013027 Ga0068857_1000130275 459
215 3300025922 Ga0207646_10001024 Ga0207646_1000102414 459
216 3300026116 Ga0207674_10019960 Ga0207674_100199605 459
217 3300049823 Ga0501044_0019067 Ga0501044_0019067_3051_4508 459

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

224

383

0.93

PF02310

B12-binding

B12 binding domain

82

182

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4q37-assembly2.cif.gz_B crystal structure of the hypothetical protein tm0182 thermotoga maritima, n-terminal domain. 0.8495 64 139
6fd2-assembly1.cif.gz_B radical sam 1,2-diol dehydratase aprd4 in complex with its substrate paromamine 0.8035 2 424
6wtf-assembly1.cif.gz_A structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with tryptophan substrate and sam analog (aza-sam) bound 0.7733 2 354
6wtf-assembly2.cif.gz_B structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with tryptophan substrate and sam analog (aza-sam) bound 0.7593 2 354
8asw-assembly1.cif.gz_C cryo-em structure of yeast elp123 in complex with alanine trna 0.7567 195 355
ID Description Score Start End Superfamily
af_A0A1D6JM25_181_293_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.8632 265 350 3.30.750.200
af_P96395_164_380_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8533 166 355 3.80.30.20
af_Q58536_158_370_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8422 236 389 3.80.30.20
af_Q58882_171_402_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8217 161 349 3.80.30.20
af_Q58555_290_551_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8117 164 352 3.80.30.20
ID Description Score Start End GO Terms
AF-A0A7C6UNL5-F1-model_v4 Radical SAM protein 0.9849 166 427 GO:0003824
GO:0005829
GO:0051536
AF-A0A2G9XZP4-F1-model_v4 B12-binding domain-containing radical SAM protein 0.9739 81 425 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051539
AF-A0A7X7HEJ4-F1-model_v4 deleted 0.972 1 427
AF-A0A0G0IYR5-F1-model_v4 Radical SAM domain protein 0.969 1 430 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051539
AF-A0A7C3N9K4-F1-model_v4 B12-binding domain-containing radical SAM protein 0.9654 1 396 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
88.07 0.85 High
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Predicted Structure (AlphaFold2)

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