F328652

General Info

Members Datasets Scaffolds Average Seq Length
217 147 217 329

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100049921|Ga0075430_1000499212
Length 344
Sequence MTHLRHPTHPIPPGTRDILPDEMRELRRLSLALIDTFERFGYGEVATPTIEYEDVLARGDERGAPVAYRFFDESGELLAMRSDMTIPIARLVANRYAGAEPPYRLCYLARAYRAVRPQRGQMREFTQAGVELVGAPAPEGTVEVVEVLAAALDAAGLTRAVIGLGDADLYRQLLDEVGVTGEARGRLLDCLATHDHVGLEAEVGRLDLDEQHRDTLLRAPTLRGGPEVLEEARRLGGPATDRATSRLAETFEALRARGVADRISLDLGLLRDLGYYTGAILEVYDPALGHILGGGGRYDELMGRFGRPLPAAGFALHLERLHVAQAEEERESAIRSPQSAGGPA

Samples

Sample ID Description Type Environment
1 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
65 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
66 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
67 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
68 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
69 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
70 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
71 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
74 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
75 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
79 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
80 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
81 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
82 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
83 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
90 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
91 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
92 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
95 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
96 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
97 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
100 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
103 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
104 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
141 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
142 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
143 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
144 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
145 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.84
Nodule 0
Rhizoplane 12.44
Rhizosphere 84.79
Stem 0
Stem Tuber 0
Unclassified 0.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070682_100000578 3300005337 Bacteria 22504
2 Ga0068868_100012815 3300005338 Bacteria 6133
3 Ga0070689_100265845 3300005340 Bacteria 1419
4 Ga0070668_100483959 3300005347 Bacteria 1069
5 Ga0070671_100153939 3300005355 Bacteria 1942
6 Ga0070674_100000235 3300005356 Bacteria 27333
7 Ga0070674_100083094 3300005356 Bacteria 2292
8 Ga0070711_100000944 3300005439 Bacteria 15375
9 Ga0070700_100120107 3300005441 Bacteria 1760
10 Ga0070678_100078379 3300005456 Bacteria 2496
11 Ga0070662_100000925 3300005457 Bacteria 17953
12 Ga0070684_100038310 3300005535 Bacteria 4118
13 Ga0070693_100002911 3300005547 Bacteria 7898
14 Ga0070704_100112985 3300005549 Bacteria 2070
15 Ga0068866_10000008 3300005718 Bacteria 117658
16 Ga0068866_10043414 3300005718 Bacteria 2244
17 Ga0068863_100000022 3300005841 Bacteria 188278
18 Ga0068863_100003052 3300005841 Bacteria 16547
19 Ga0081455_10047633 3300005937 Bacteria 3710
20 Ga0081455_10298748 3300005937 Bacteria 1156
21 Ga0081538_10000227 3300005981 Bacteria 63237
22 Ga0081538_10028617 3300005981 Bacteria 3827
23 Ga0081538_10038860 3300005981 Bacteria 3061
24 Ga0081538_10081417 3300005981 Bacteria 1722
25 Ga0081540_1000041 3300005983 Bacteria 136874
26 Ga0081540_1002481 3300005983 Bacteria 15029
27 Ga0081539_10028843 3300005985 Bacteria 3484
28 Ga0075365_10008402 3300006038 Bacteria 5858
29 Ga0070715_10000021 3300006163 Bacteria 119283
30 Ga0097621_100238015 3300006237 Bacteria 1591
31 Ga0068871_100141943 3300006358 Bacteria 2043
32 Ga0075428_100425871 3300006844 Unclassified 1422
33 Ga0075430_100015501 3300006846 Bacteria 6489
34 Ga0075430_100049921 3300006846 Bacteria 3530
35 Ga0075430_100222266 3300006846 Bacteria 1567
36 Ga0075431_100008031 3300006847 Bacteria 10528
37 Ga0075431_100035975 3300006847 Bacteria 5100
38 Ga0075431_100097564 3300006847 Bacteria 3035
39 Ga0075433_10001387 3300006852 Bacteria 17846
40 Ga0075433_10033321 3300006852 Bacteria 4415
41 Ga0075434_100002616 3300006871 Bacteria 15875
42 Ga0075434_100038871 3300006871 Bacteria 4715
43 Ga0075429_100005398 3300006880 Bacteria 11000
44 Ga0114129_10011936 3300009147 Bacteria 12356
45 Ga0114129_10046061 3300009147 Bacteria 6130
46 Ga0114129_10116760 3300009147 Bacteria 3677
47 Ga0105242_10000533 3300009176 Bacteria 30003
48 Ga0105242_10141371 3300009176 Bacteria 2089
49 Ga0105238_10000055 3300009551 Bacteria 139232
50 Ga0157370_10044257 3300013104 Bacteria 4280
51 Ga0157374_10003554 3300013296 Bacteria 13123
52 Ga0157374_10090859 3300013296 Bacteria 2911
53 Ga0157378_10106801 3300013297 Bacteria 2561
54 Ga0157378_10177462 3300013297 Bacteria 2002
55 Ga0157375_10041089 3300013308 Bacteria 4463
56 Ga0157375_10484343 3300013308 Bacteria 1402
57 Ga0163163_10282670 3300014325 Bacteria 1711
58 Ga0157380_10005021 3300014326 Bacteria 9224
59 Ga0163161_10000053 3300017792 Bacteria 117408
60 Ga0163161_10162806 3300017792 Bacteria 1702
61 Ga0207642_10000002 3300025899 Bacteria 658166
62 Ga0207642_10011322 3300025899 Bacteria 3177
63 Ga0207710_10052733 3300025900 Bacteria 1829
64 Ga0207685_10000028 3300025905 Bacteria 97935
65 Ga0207694_10000063 3300025924 Bacteria 139700
66 Ga0207690_10046686 3300025932 Bacteria 2870
67 Ga0207706_10002479 3300025933 Bacteria 17986
68 Ga0207686_10000073 3300025934 Bacteria 92009
69 Ga0207670_10090996 3300025936 Bacteria 2157
70 Ga0207669_10000182 3300025937 Bacteria 29102
71 Ga0207668_10446330 3300025972 Bacteria 1103
72 Ga0207677_10058516 3300026023 Bacteria 2654
73 Ga0207708_10087319 3300026075 Bacteria 2401
74 Ga0207708_10139501 3300026075 Bacteria 1900
75 Ga0207641_10000016 3300026088 Bacteria 307363
76 Ga0207641_10002193 3300026088 Bacteria 18362
77 Ga0207683_10111290 3300026121 Bacteria 2452
78 Ga0207428_10013763 3300027907 Bacteria 7052
79 Ga0207428_10113761 3300027907 Bacteria 2080
80 Ga0265319_1000105 3300028563 Bacteria 65502
81 Ga0265338_10000507 3300028800 Bacteria 69026
82 Ga0307511_10137075 3300030521 Bacteria 1453
83 Ga0307513_10109185 3300031456 Bacteria 2765
84 Ga0373956_0043685 3300035119 Bacteria 1996
85 Ga0395900_0193332 3300037418 Bacteria 2063
86 Ga0395900_0277839 3300037418 Bacteria 1668
87 Ga0395898_0142838 3300037466 Bacteria 2292
88 Ga0395898_0240378 3300037466 Bacteria 1727
89 Ga0395901_0129234 3300038443 Bacteria 2655
90 Ga0466963_0000008 3300044694 Bacteria 74916
91 Ga0466963_0045101 3300044694 Bacteria 2903
92 Ga0495592_0003688 3300046454 Bacteria 11039
93 Ga0495603_0007986 3300046455 Bacteria 6388
94 Ga0495603_0010572 3300046455 Bacteria 5590
95 Ga0495629_0007301 3300046459 Bacteria 8140
96 Ga0495629_0223142 3300046459 Bacteria 1300
97 Ga0495651_0026915 3300046462 Bacteria 4478
98 Ga0495651_0045199 3300046462 Bacteria 3412
99 Ga0495651_0213438 3300046462 Bacteria 1341
100 Ga0495653_0225180 3300046463 Bacteria 1258
101 Ga0495582_0000001 3300046473 Bacteria 252434
102 Ga0495639_0128529 3300046475 Unclassified 1212
103 Ga0495662_0002686 3300046476 Bacteria 8981
104 Ga0495594_0000011 3300046499 Bacteria 118444
105 Ga0495608_0005478 3300046511 Bacteria 9073
106 Ga0495608_0007506 3300046511 Bacteria 7697
107 Ga0495618_0000091 3300046514 Bacteria 64654
108 Ga0495620_0000211 3300046515 Bacteria 43874
109 Ga0495628_0034992 3300046516 Bacteria 4038
110 Ga0495628_0219968 3300046516 Bacteria 1426
111 Ga0495630_0004844 3300046517 Bacteria 9443
112 Ga0495644_0000176 3300046523 Bacteria 30116
113 Ga0495652_0000037 3300046529 Bacteria 133232
114 Ga0495652_0014694 3300046529 Bacteria 7021
115 Ga0495640_0019139 3300046533 Bacteria 5059
116 Ga0495586_0031863 3300046535 Bacteria 2826
117 Ga0495587_0017335 3300046536 Bacteria 4474
118 Ga0495587_0200758 3300046536 Bacteria 1128
119 Ga0495598_0001538 3300046537 Bacteria 4612
120 Ga0495645_0019494 3300046543 Bacteria 4882
121 Ga0495622_0000021 3300046557 Bacteria 162267
122 Ga0495668_0050171 3300046616 Bacteria 2313
123 Ga0495634_0006592 3300046642 Bacteria 8806
124 Ga0495634_0008204 3300046642 Bacteria 7785
125 Ga0495635_0000086 3300046663 Bacteria 55020
126 Ga0495657_0002416 3300046675 Bacteria 15729
127 Ga0495657_0141180 3300046675 Bacteria 1501
128 Ga0495647_0000001 3300046681 Bacteria 222371
129 Ga0495647_0001895 3300046681 Bacteria 6513
130 Ga0495647_0022110 3300046681 Bacteria 2296
131 Ga0495658_0000002 3300046683 Bacteria 309651
132 Ga0495669_0000143 3300046684 Bacteria 45428
133 Ga0495613_0003350 3300046689 Bacteria 11976
134 Ga0495624_0000594 3300046690 Bacteria 28184
135 Ga0495670_0060059 3300046691 Bacteria 1910
136 Ga0495600_0002071 3300046809 Bacteria 11318
137 Ga0495600_0107325 3300046809 Bacteria 1819
138 Ga0495604_0000050 3300047317 Bacteria 108094
139 Ga0495674_0000059 3300047319 Bacteria 73353
140 Ga0495674_0300926 3300047319 Bacteria 1310
141 Ga0495672_0070235 3300047320 Bacteria 1985
142 Ga0495676_0004577 3300047321 Bacteria 12659
143 Ga0495676_0025514 3300047321 Bacteria 5102
144 Ga0495676_0181603 3300047321 Bacteria 1474
145 Ga0495680_0000212 3300047322 Bacteria 63418
146 Ga0495680_0025775 3300047322 Bacteria 4862
147 Ga0495675_0111853 3300047444 Bacteria 1704
148 Ga0495685_026677 3300047447 Bacteria 1986
149 Ga0495673_0051902 3300047469 Bacteria 1794
150 Ga0495593_0061502 3300047673 Bacteria 1964
151 Ga0495593_0136314 3300047673 Bacteria 1244
152 Ga0496100_0000001 3300048903 Bacteria 530179
153 Ga0496100_0000013 3300048903 Bacteria 177476
154 Ga0496101_0000004 3300048904 Bacteria 331599
155 Ga0496101_0000035 3300048904 Bacteria 177237
156 Ga0496102_0000522 3300048905 Bacteria 41862
157 Ga0496103_0000174 3300048906 Bacteria 67124
158 Ga0496103_0007177 3300048906 Bacteria 6644
159 Ga0496104_0000052 3300048907 Bacteria 137286
160 Ga0496104_0001566 3300048907 Bacteria 19685
161 Ga0496105_0000030 3300048908 Bacteria 137325
162 Ga0496105_0001501 3300048908 Bacteria 16486
163 Ga0496105_0013778 3300048908 Bacteria 6421
164 Ga0496106_0000062 3300048909 Bacteria 85769
165 Ga0496106_0000139 3300048909 Bacteria 54238
166 Ga0496106_0000414 3300048909 Bacteria 30298
167 Ga0496107_0000005 3300048910 Bacteria 281747
168 Ga0496107_0000020 3300048910 Bacteria 148990
169 Ga0496107_0005847 3300048910 Bacteria 8420
170 Ga0496109_0006784 3300048912 Bacteria 9645
171 Ga0496110_0029251 3300048913 Bacteria 4740
172 Ga0496111_0012923 3300048914 Bacteria 5666
173 Ga0496111_0104642 3300048914 Bacteria 2082
174 Ga0496113_0151938 3300048916 Bacteria 1827
175 Ga0496114_0000039 3300048917 Bacteria 138486
176 Ga0496114_0009804 3300048917 Bacteria 7611
177 Ga0496115_0000011 3300048918 Bacteria 222529
178 Ga0496115_0000162 3300048918 Bacteria 62522
179 Ga0501034_0085892 3300049571 Unclassified 3148
180 Ga0501036_0060393 3300049572 Bacteria 3212
181 Ga0501038_0156267 3300049574 Bacteria 1857
182 Ga0501039_0166879 3300049575 Bacteria 1731
183 Ga0501040_0065635 3300049576 Bacteria 2500
184 Ga0501040_0369080 3300049576 Bacteria 1029
185 Ga0501042_0167054 3300049578 Bacteria 1587
186 Ga0501071_0161551 3300049587 Bacteria 1674
187 Ga0501072_0008765 3300049588 Bacteria 7679
188 Ga0501074_0034123 3300049590 Bacteria 3689
189 Ga0501075_0004637 3300049591 Bacteria 9327
190 Ga0501079_0106097 3300049741 Bacteria 2180
191 Ga0501045_0020050 3300049824 Bacteria 4773
192 nmdc:mga0yw44_35622_c1 3300050492 Bacteria 2926
193 nmdc:mga05p37_218350_c1 3300050507 Bacteria 2302
194 nmdc:mga05p37_8499_c1 3300050507 Bacteria 12134
195 nmdc:mga09592_53047_c1 3300050508 Bacteria 3423
196 nmdc:mga0qj67_42653_c1 3300050509 Bacteria 3571
197 nmdc:mga0qj67_62039_c1 3300050509 Bacteria 2970
198 nmdc:mga06r32_11123_c1 3300050510 Bacteria 8103
199 nmdc:mga0n895_53411_c1 3300050512 Bacteria 3970
200 nmdc:mga0a205_13148_c1 3300050515 Bacteria 7320
201 nmdc:mga0a205_134804_c1 3300050515 Bacteria 2370
202 nmdc:mga0a205_521_c1 3300050515 Bacteria 18797
203 Ga0495601_0006880 3300053077 Bacteria 6662
204 Ga0495601_0014754 3300053077 Bacteria 4715
205 Ga0495612_0000160 3300053078 Bacteria 28362
206 Ga0495612_0015832 3300053078 Bacteria 3023
207 Ga0495655_0000002 3300053083 Bacteria 312752
208 Ga0495595_0000178 3300053084 Bacteria 25404
209 Ga0495619_0000485 3300053085 Bacteria 26622
210 Ga0495619_0000680 3300053085 Bacteria 22263
211 Ga0495619_0003183 3300053085 Bacteria 10637
212 Ga0495619_0009287 3300053085 Bacteria 6208
213 Ga0495619_0075668 3300053085 Bacteria 2259
214 Ga0500566_0007440 3300053094 Bacteria 6490
215 Ga0500628_000001 3300053129 Bacteria 564074
216 Ga0501084_0273588 3300054114 Bacteria 1426
217 Ga0530510_0100817 3300061734 Bacteria 2111

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044694 Ga0466963_0045101 Ga0466963_0045101_1445_2395 284
2 3300047319 Ga0495674_0300926 Ga0495674_0300926_10_924 304
3 3300006844 Ga0075428_100425871 Ga0075428_1004258711 305
4 3300006847 Ga0075431_100008031 Ga0075431_10000803111 305
5 3300006871 Ga0075434_100038871 Ga0075434_1000388715 305
6 3300009147 Ga0114129_10046061 Ga0114129_100460615 305
7 3300027907 Ga0207428_10013763 Ga0207428_100137636 305
8 3300050515 nmdc:mga0a205_13148_c1 nmdc:mga0a205_13148_c1_5436_6437 305
9 3300031456 Ga0307513_10109185 Ga0307513_101091852 314
10 3300046809 Ga0495600_0107325 Ga0495600_0107325_538_1482 314
11 3300047673 Ga0495593_0061502 Ga0495593_0061502_471_1415 314
12 3300049824 Ga0501045_0020050 Ga0501045_0020050_3815_4762 314
13 3300053085 Ga0495619_0075668 Ga0495619_0075668_705_1649 314
14 3300037466 Ga0395898_0142838 Ga0395898_0142838_1216_2163 315
15 3300046690 Ga0495624_0000594 Ga0495624_0000594_22856_23803 315
16 3300048916 Ga0496113_0151938 Ga0496113_0151938_22_972 315
17 3300049571 Ga0501034_0085892 Ga0501034_0085892_1626_2591 315
18 3300049576 Ga0501040_0369080 Ga0501040_0369080_29_982 315
19 3300053085 Ga0495619_0000485 Ga0495619_0000485_21143_22096 315
20 3300053085 Ga0495619_0009287 Ga0495619_0009287_2665_3612 315
21 3300006038 Ga0075365_10008402 Ga0075365_100084023 317
22 3300050492 nmdc:mga0yw44_35622_c1 nmdc:mga0yw44_35622_c1_182_1183 317
23 3300005981 Ga0081538_10028617 Ga0081538_100286173 319
24 3300025934 Ga0207686_10000073 Ga0207686_10000073109 320
25 3300046462 Ga0495651_0213438 Ga0495651_0213438_299_1261 320
26 3300046675 Ga0495657_0141180 Ga0495657_0141180_22_993 320
27 3300005356 Ga0070674_100000235 Ga0070674_1000002356 325
28 3300005718 Ga0068866_10000008 Ga0068866_100000086 325
29 3300025899 Ga0207642_10000002 Ga0207642_10000002663 325
30 3300025937 Ga0207669_10000182 Ga0207669_100001826 325
31 3300046459 Ga0495629_0223142 Ga0495629_0223142_291_1277 325
32 3300005456 Ga0070678_100078379 Ga0070678_1000783792 326
33 3300013297 Ga0157378_10106801 Ga0157378_101068013 326
34 3300025900 Ga0207710_10052733 Ga0207710_100527332 326
35 3300026121 Ga0207683_10111290 Ga0207683_101112902 326
36 3300027907 Ga0207428_10113761 Ga0207428_101137613 326
37 3300047320 Ga0495672_0070235 Ga0495672_0070235_766_1749 326
38 3300006852 Ga0075433_10033321 Ga0075433_100333212 327
39 3300006871 Ga0075434_100002616 Ga0075434_1000026165 327
40 3300009147 Ga0114129_10011936 Ga0114129_100119369 327
41 3300050507 nmdc:mga05p37_8499_c1 nmdc:mga05p37_8499_c1_1017_2000 327
42 3300050512 nmdc:mga0n895_53411_c1 nmdc:mga0n895_53411_c1_614_1597 327
43 3300050515 nmdc:mga0a205_134804_c1 nmdc:mga0a205_134804_c1_40_1023 327
44 3300005535 Ga0070684_100038310 Ga0070684_1000383103 328
45 3300037418 Ga0395900_0193332 Ga0395900_0193332_529_1515 328
46 3300048912 Ga0496109_0006784 Ga0496109_0006784_4871_5857 328
47 3300048914 Ga0496111_0012923 Ga0496111_0012923_1089_2075 328
48 3300013104 Ga0157370_10044257 Ga0157370_100442572 329
49 3300035119 Ga0373956_0043685 Ga0373956_0043685_792_1784 329
50 3300046455 Ga0495603_0010572 Ga0495603_0010572_646_1635 329
51 3300046511 Ga0495608_0007506 Ga0495608_0007506_3157_4146 329
52 3300046536 Ga0495587_0200758 Ga0495587_0200758_101_1090 329
53 3300005340 Ga0070689_100265845 Ga0070689_1002658452 330
54 3300005347 Ga0070668_100483959 Ga0070668_1004839591 330
55 3300005549 Ga0070704_100112985 Ga0070704_1001129852 330
56 3300005841 Ga0068863_100000022 Ga0068863_100000022180 330
57 3300005937 Ga0081455_10298748 Ga0081455_102987481 330
58 3300005981 Ga0081538_10000227 Ga0081538_1000022743 330
59 3300005981 Ga0081538_10038860 Ga0081538_100388603 330
60 3300006846 Ga0075430_100015501 Ga0075430_1000155014 330
61 3300006846 Ga0075430_100049921 Ga0075430_1000499212 330
62 3300006846 Ga0075430_100222266 Ga0075430_1002222662 330
63 3300006847 Ga0075431_100035975 Ga0075431_1000359754 330
64 3300006880 Ga0075429_100005398 Ga0075429_1000053984 330
65 3300009147 Ga0114129_10116760 Ga0114129_101167602 330
66 3300009176 Ga0105242_10141371 Ga0105242_101413712 330
67 3300013297 Ga0157378_10177462 Ga0157378_101774622 330
68 3300013308 Ga0157375_10041089 Ga0157375_100410894 330
69 3300014326 Ga0157380_10005021 Ga0157380_100050214 330
70 3300025932 Ga0207690_10046686 Ga0207690_100466862 330
71 3300025936 Ga0207670_10090996 Ga0207670_100909962 330
72 3300025972 Ga0207668_10446330 Ga0207668_104463301 330
73 3300026088 Ga0207641_10000016 Ga0207641_10000016302 330
74 3300028563 Ga0265319_1000105 Ga0265319_10001054 330
75 3300028800 Ga0265338_10000507 Ga0265338_1000050770 330
76 3300030521 Ga0307511_10137075 Ga0307511_101370751 330
77 3300046455 Ga0495603_0007986 Ga0495603_0007986_1491_2483 330
78 3300046459 Ga0495629_0007301 Ga0495629_0007301_3215_4210 330
79 3300046523 Ga0495644_0000176 Ga0495644_0000176_24759_25751 330
80 3300046537 Ga0495598_0001538 Ga0495598_0001538_3067_4059 330
81 3300046691 Ga0495670_0060059 Ga0495670_0060059_816_1808 330
82 3300047321 Ga0495676_0181603 Ga0495676_0181603_57_1052 330
83 3300048909 Ga0496106_0000139 Ga0496106_0000139_49340_50332 330
84 3300048910 Ga0496107_0005847 Ga0496107_0005847_6838_7830 330
85 3300049572 Ga0501036_0060393 Ga0501036_0060393_1842_2837 330
86 3300049574 Ga0501038_0156267 Ga0501038_0156267_327_1322 330
87 3300049575 Ga0501039_0166879 Ga0501039_0166879_390_1385 330
88 3300049576 Ga0501040_0065635 Ga0501040_0065635_231_1226 330
89 3300049587 Ga0501071_0161551 Ga0501071_0161551_157_1152 330
90 3300049588 Ga0501072_0008765 Ga0501072_0008765_3731_4723 330
91 3300049590 Ga0501074_0034123 Ga0501074_0034123_2231_3226 330
92 3300049591 Ga0501075_0004637 Ga0501075_0004637_4205_5197 330
93 3300049741 Ga0501079_0106097 Ga0501079_0106097_1064_2059 330
94 3300050507 nmdc:mga05p37_218350_c1 nmdc:mga05p37_218350_c1_957_1949 330
95 3300050508 nmdc:mga09592_53047_c1 nmdc:mga09592_53047_c1_849_1841 330
96 3300050509 nmdc:mga0qj67_42653_c1 nmdc:mga0qj67_42653_c1_2228_3220 330
97 3300050509 nmdc:mga0qj67_62039_c1 nmdc:mga0qj67_62039_c1_1110_2102 330
98 3300050510 nmdc:mga06r32_11123_c1 nmdc:mga06r32_11123_c1_5337_6329 330
99 3300053078 Ga0495612_0000160 Ga0495612_0000160_24102_25094 330
100 3300053083 Ga0495655_0000002 Ga0495655_0000002_308225_309223 330
101 3300053129 Ga0500628_000001 Ga0500628_000001_396894_397892 330
102 3300054114 Ga0501084_0273588 Ga0501084_0273588_103_1188 330
103 3300061734 Ga0530510_0100817 Ga0530510_0100817_167_1162 330
104 3300005337 Ga0070682_100000578 Ga0070682_1000005786 331
105 3300005338 Ga0068868_100012815 Ga0068868_1000128158 331
106 3300005355 Ga0070671_100153939 Ga0070671_1001539392 331
107 3300005356 Ga0070674_100083094 Ga0070674_1000830943 331
108 3300005439 Ga0070711_100000944 Ga0070711_10000094420 331
109 3300005441 Ga0070700_100120107 Ga0070700_1001201072 331
110 3300005457 Ga0070662_100000925 Ga0070662_1000009257 331
111 3300005547 Ga0070693_100002911 Ga0070693_1000029117 331
112 3300005718 Ga0068866_10043414 Ga0068866_100434143 331
113 3300005841 Ga0068863_100003052 Ga0068863_10000305217 331
114 3300005937 Ga0081455_10047633 Ga0081455_100476333 331
115 3300005981 Ga0081538_10081417 Ga0081538_100814172 331
116 3300005983 Ga0081540_1000041 Ga0081540_1000041102 331
117 3300005983 Ga0081540_1002481 Ga0081540_100248114 331
118 3300005985 Ga0081539_10028843 Ga0081539_100288433 331
119 3300006163 Ga0070715_10000021 Ga0070715_10000021119 331
120 3300006237 Ga0097621_100238015 Ga0097621_1002380152 331
121 3300006358 Ga0068871_100141943 Ga0068871_1001419432 331
122 3300006847 Ga0075431_100097564 Ga0075431_1000975642 331
123 3300006852 Ga0075433_10001387 Ga0075433_1000138721 331
124 3300009176 Ga0105242_10000533 Ga0105242_1000053332 331
125 3300009551 Ga0105238_10000055 Ga0105238_10000055135 331
126 3300013296 Ga0157374_10003554 Ga0157374_1000355417 331
127 3300013296 Ga0157374_10090859 Ga0157374_100908593 331
128 3300013308 Ga0157375_10484343 Ga0157375_104843432 331
129 3300014325 Ga0163163_10282670 Ga0163163_102826702 331
130 3300017792 Ga0163161_10000053 Ga0163161_100000538 331
131 3300017792 Ga0163161_10162806 Ga0163161_101628062 331
132 3300025899 Ga0207642_10011322 Ga0207642_100113223 331
133 3300025905 Ga0207685_10000028 Ga0207685_100000286 331
134 3300025924 Ga0207694_10000063 Ga0207694_100000637 331
135 3300025933 Ga0207706_10002479 Ga0207706_100024797 331
136 3300026023 Ga0207677_10058516 Ga0207677_100585163 331
137 3300026075 Ga0207708_10087319 Ga0207708_100873192 331
138 3300026075 Ga0207708_10139501 Ga0207708_101395012 331
139 3300026088 Ga0207641_10002193 Ga0207641_1000219317 331
140 3300037418 Ga0395900_0277839 Ga0395900_0277839_437_1435 331
141 3300037466 Ga0395898_0240378 Ga0395898_0240378_230_1255 331
142 3300038443 Ga0395901_0129234 Ga0395901_0129234_1097_2092 331
143 3300044694 Ga0466963_0000008 Ga0466963_0000008_69571_70566 331
144 3300046454 Ga0495592_0003688 Ga0495592_0003688_4770_5765 331
145 3300046462 Ga0495651_0026915 Ga0495651_0026915_2618_3613 331
146 3300046462 Ga0495651_0045199 Ga0495651_0045199_789_1787 331
147 3300046463 Ga0495653_0225180 Ga0495653_0225180_152_1150 331
148 3300046473 Ga0495582_0000001 Ga0495582_0000001_179580_180578 331
149 3300046475 Ga0495639_0128529 Ga0495639_0128529_140_1135 331
150 3300046476 Ga0495662_0002686 Ga0495662_0002686_2539_3534 331
151 3300046499 Ga0495594_0000011 Ga0495594_0000011_77716_78711 331
152 3300046511 Ga0495608_0005478 Ga0495608_0005478_2364_3359 331
153 3300046514 Ga0495618_0000091 Ga0495618_0000091_6302_7297 331
154 3300046515 Ga0495620_0000211 Ga0495620_0000211_3162_4157 331
155 3300046516 Ga0495628_0034992 Ga0495628_0034992_2792_3787 331
156 3300046516 Ga0495628_0219968 Ga0495628_0219968_45_1040 331
157 3300046517 Ga0495630_0004844 Ga0495630_0004844_4471_5466 331
158 3300046529 Ga0495652_0000037 Ga0495652_0000037_129706_130704 331
159 3300046529 Ga0495652_0014694 Ga0495652_0014694_1610_2608 331
160 3300046533 Ga0495640_0019139 Ga0495640_0019139_2353_3351 331
161 3300046535 Ga0495586_0031863 Ga0495586_0031863_1338_2333 331
162 3300046536 Ga0495587_0017335 Ga0495587_0017335_1969_2967 331
163 3300046543 Ga0495645_0019494 Ga0495645_0019494_599_1597 331
164 3300046557 Ga0495622_0000021 Ga0495622_0000021_148117_149112 331
165 3300046616 Ga0495668_0050171 Ga0495668_0050171_422_1417 331
166 3300046642 Ga0495634_0006592 Ga0495634_0006592_2458_3456 331
167 3300046642 Ga0495634_0008204 Ga0495634_0008204_4078_5073 331
168 3300046663 Ga0495635_0000086 Ga0495635_0000086_5542_6537 331
169 3300046675 Ga0495657_0002416 Ga0495657_0002416_5500_6495 331
170 3300046681 Ga0495647_0000001 Ga0495647_0000001_214879_215877 331
171 3300046681 Ga0495647_0001895 Ga0495647_0001895_5405_6400 331
172 3300046681 Ga0495647_0022110 Ga0495647_0022110_1239_2234 331
173 3300046683 Ga0495658_0000002 Ga0495658_0000002_303186_304184 331
174 3300046684 Ga0495669_0000143 Ga0495669_0000143_40095_41090 331
175 3300046689 Ga0495613_0003350 Ga0495613_0003350_6156_7151 331
176 3300046809 Ga0495600_0002071 Ga0495600_0002071_4518_5513 331
177 3300047317 Ga0495604_0000050 Ga0495604_0000050_100446_101441 331
178 3300047319 Ga0495674_0000059 Ga0495674_0000059_34258_35256 331
179 3300047321 Ga0495676_0004577 Ga0495676_0004577_6851_7846 331
180 3300047321 Ga0495676_0025514 Ga0495676_0025514_1114_2112 331
181 3300047322 Ga0495680_0000212 Ga0495680_0000212_6018_7013 331
182 3300047322 Ga0495680_0025775 Ga0495680_0025775_1345_2340 331
183 3300047444 Ga0495675_0111853 Ga0495675_0111853_233_1231 331
184 3300047447 Ga0495685_026677 Ga0495685_026677_920_1915 331
185 3300047469 Ga0495673_0051902 Ga0495673_0051902_166_1164 331
186 3300047673 Ga0495593_0136314 Ga0495593_0136314_74_1069 331
187 3300048903 Ga0496100_0000001 Ga0496100_0000001_525763_526761 331
188 3300048903 Ga0496100_0000013 Ga0496100_0000013_171951_172946 331
189 3300048904 Ga0496101_0000004 Ga0496101_0000004_327115_328113 331
190 3300048904 Ga0496101_0000035 Ga0496101_0000035_171951_172946 331
191 3300048905 Ga0496102_0000522 Ga0496102_0000522_37292_38293 331
192 3300048906 Ga0496103_0000174 Ga0496103_0000174_2749_3750 331
193 3300048906 Ga0496103_0007177 Ga0496103_0007177_4208_5203 331
194 3300048907 Ga0496104_0000052 Ga0496104_0000052_131993_132988 331
195 3300048907 Ga0496104_0001566 Ga0496104_0001566_4646_5644 331
196 3300048908 Ga0496105_0000030 Ga0496105_0000030_4338_5333 331
197 3300048908 Ga0496105_0001501 Ga0496105_0001501_12957_13955 331
198 3300048908 Ga0496105_0013778 Ga0496105_0013778_3893_4897 331
199 3300048909 Ga0496106_0000062 Ga0496106_0000062_80483_81478 331
200 3300048909 Ga0496106_0000414 Ga0496106_0000414_25880_26878 331
201 3300048910 Ga0496107_0000005 Ga0496107_0000005_3487_4485 331
202 3300048910 Ga0496107_0000020 Ga0496107_0000020_143100_144095 331
203 3300048913 Ga0496110_0029251 Ga0496110_0029251_2459_3454 331
204 3300048914 Ga0496111_0104642 Ga0496111_0104642_1041_2036 331
205 3300048917 Ga0496114_0000039 Ga0496114_0000039_130693_131691 331
206 3300048917 Ga0496114_0009804 Ga0496114_0009804_1008_2003 331
207 3300048918 Ga0496115_0000011 Ga0496115_0000011_3245_4243 331
208 3300048918 Ga0496115_0000162 Ga0496115_0000162_55495_56493 331
209 3300049578 Ga0501042_0167054 Ga0501042_0167054_210_1205 331
210 3300050515 nmdc:mga0a205_521_c1 nmdc:mga0a205_521_c1_2917_3912 331
211 3300053077 Ga0495601_0006880 Ga0495601_0006880_1399_2397 331
212 3300053077 Ga0495601_0014754 Ga0495601_0014754_704_1717 331
213 3300053078 Ga0495612_0015832 Ga0495612_0015832_431_1429 331
214 3300053084 Ga0495595_0000178 Ga0495595_0000178_24079_25074 331
215 3300053085 Ga0495619_0000680 Ga0495619_0000680_3906_4919 331
216 3300053085 Ga0495619_0003183 Ga0495619_0003183_5061_6056 331
217 3300053094 Ga0500566_0007440 Ga0500566_0007440_2825_3820 331

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13393

tRNA-synt_His

Histidyl-tRNA synthetase

14

321

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
3od1-assembly1.cif.gz_A the crystal structure of an atp phosphoribosyltransferase regulatory subunit/histidyl-trna synthetase from bacillus halodurans c 0.8136 1 320
3od1-assembly1.cif.gz_B the crystal structure of an atp phosphoribosyltransferase regulatory subunit/histidyl-trna synthetase from bacillus halodurans c 0.8005 1 320
8oy0-assembly1.cif.gz_B atp phosphoribosyltransferase (hiszg atpprt) from acinetobacter baumanii 0.7838 5 316
3od1-assembly1.cif.gz_A the crystal structure of an atp phosphoribosyltransferase regulatory subunit/histidyl-trna synthetase from bacillus halodurans c 0.7792 1 320
1z7m-assembly3.cif.gz_D atp phosphoribosyl transferase (hiszg atp-prtase) from lactococcus lactis 0.7766 3 324
ID Description Score Start End Superfamily
3od1B01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7975 2 320 3.30.930.10
af_Q58406_2_319_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7948 2 317 3.30.930.10
3od1B01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7907 2 320 3.30.930.10
af_Q58406_2_319_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7808 2 317 3.30.930.10
1z7nB00 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7705 3 324 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A524JAW2-F1-model_v4 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain-containing protein 0.8887 170 324
AF-A0A357ZG22-F1-model_v4 ATP phosphoribosyltransferase regulatory subunit 0.8756 146 323 GO:0016757
AF-A0A7C6ULA0-F1-model_v4 ATP phosphoribosyltransferase regulatory subunit 0.8572 100 325 GO:0004821
GO:0005737
GO:0006427
GO:0016757
AF-A0A6J4RWP6-F1-model_v4 ATP phosphoribosyltransferase regulatory subunit 0.8456 1 326 GO:0000105
GO:0004821
GO:0005737
GO:0006427
GO:0016757
AF-A0A3D4AM98-F1-model_v4 ATP phosphoribosyltransferase regulatory subunit 0.8455 61 330 GO:0000105
GO:0004821
GO:0005737
GO:0006427
GO:0016757

Feature Viewer

pLDDT pTM Quality
83.3 0.84 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map