F328650

General Info

Members Datasets Scaffolds Average Seq Length
217 130 434 413

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100001499|Ga0075430_10000149910
Length 464
Sequence MNPPEMNYRRVADFLSRCGRRTAPGVATPTLWICFKRLDVRVSGTMRLLCPIAVAAAFLAGTSGTVTAQMDADVGGRLTREQTVRAALDIARAAETTTIDEQVRLCQIPAPPFKEAARAAAYADAFRAAGLRNVRIDSAGNVLGERPGRATRPHLVFSAHLDTVFPEETDVRVTREGSILKGPGIGDDCRGLAVVLAVIRALNQANVETNGTITFVGTVGEEGLGDLRGVKALFGETLAGQVDRFVSVDGTGLGITHIAVGSLRYRVTFSGPGGHSYGAFGIANPMHALGRAISSFADTRPPSDPKTTFSVGRIGGGTSVNAIPADAWMEVDMRSADQESLRALESRFRGVVAAALAAENARWDQKGRISVTETLVGARPAGAIPATAPIVQAVVSVTRALGAEVELSEGSTDANIPLSLNIPAVTIDAGGSGTGSHTLDEAFDTTDSWRGTQRAVLVAIALAQ

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
87 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
88 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
89 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
90 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
106 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
107 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
108 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
109 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
113 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
114 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
115 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
116 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
119 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
120 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
121 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
122 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
123 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
124 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
125 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
126 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
127 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
128 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
129 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
130 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.84
Nodule 0
Rhizoplane 1.38
Rhizosphere 96.77
Stem 0
Stem Tuber 0
Unclassified 10.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100001499 3300006846 Bacteria 19059
2 Ga0065707_10096290 3300005295 Bacteria 3284
3 Ga0070658_10048558 3300005327 Bacteria 3436
4 Ga0070683_100000011 3300005329 Bacteria 283682
5 Ga0070670_100057849 3300005331 Bacteria 3327
6 Ga0070670_100245770 3300005331 Bacteria 1558
7 Ga0068868_100050867 3300005338 Bacteria 3256
8 Ga0070669_100003426 3300005353 Bacteria 11423
9 Ga0070675_100086974 3300005354 Bacteria 2613
10 Ga0070674_100005164 3300005356 Bacteria 7511
11 Ga0070711_100150924 3300005439 Bacteria 1752
12 Ga0070711_100173970 3300005439 Bacteria 1643
13 Ga0070694_100073791 3300005444 Bacteria 2357
14 Ga0070708_100165328 3300005445 Bacteria 2064
15 Ga0070678_100191904 3300005456 Bacteria 1680
16 Ga0070662_100097930 3300005457 Bacteria 2214
17 Ga0070681_10034297 3300005458 Bacteria 5096
18 Ga0070707_100000507 3300005468 Bacteria 38701
19 Ga0070707_100081357 3300005468 Bacteria 3127
20 Ga0070698_100036373 3300005471 Bacteria 5086
21 Ga0070679_100010548 3300005530 Bacteria 8765
22 Ga0070679_100016396 3300005530 Bacteria 7143
23 Ga0070679_100049483 3300005530 Unclassified 4186
24 Ga0070684_100000001 3300005535 Bacteria 300240
25 Ga0070684_100051454 3300005535 Unclassified 3578
26 Ga0070697_100031635 3300005536 Bacteria 4257
27 Ga0070697_100117495 3300005536 Bacteria 2222
28 Ga0070672_100046434 3300005543 Bacteria 3365
29 Ga0070695_100049524 3300005545 Bacteria 2690
30 Ga0070695_100069865 3300005545 Bacteria 2296
31 Ga0070665_100000771 3300005548 Bacteria 42242
32 Ga0068857_100145026 3300005577 Unclassified 2148
33 Ga0068857_100200666 3300005577 Bacteria 1818
34 Ga0068859_100011529 3300005617 Bacteria 8887
35 Ga0068859_100210845 3300005617 Bacteria 2029
36 Ga0068861_100013921 3300005719 Bacteria 5639
37 Ga0068863_100141171 3300005841 Bacteria 2302
38 Ga0068858_100004236 3300005842 Bacteria 14116
39 Ga0068858_100048375 3300005842 Bacteria 3941
40 Ga0068858_100107598 3300005842 Bacteria 2603
41 Ga0068862_100004605 3300005844 Bacteria 11621
42 Ga0068862_100066066 3300005844 Bacteria 3116
43 Ga0097621_100009606 3300006237 Bacteria 7031
44 Ga0097621_100020364 3300006237 Bacteria 5110
45 Ga0097621_100060503 3300006237 Bacteria 3105
46 Ga0068871_100007978 3300006358 Bacteria 7595
47 Ga0075428_100000007 3300006844 Bacteria 273226
48 Ga0075428_100042090 3300006844 Bacteria 5024
49 Ga0075431_100005881 3300006847 Bacteria 12143
50 Ga0075431_100100719 3300006847 Unclassified 2981
51 Ga0075431_100105871 3300006847 Unclassified 2902
52 Ga0075431_100263162 3300006847 Bacteria 1750
53 Ga0075429_100085125 3300006880 Bacteria 2756
54 Ga0068865_100191671 3300006881 Bacteria 1581
55 Ga0075436_100058485 3300006914 Bacteria 2662
56 Ga0097620_100011529 3300006931 Bacteria 8887
57 Ga0097620_100210844 3300006931 Bacteria 2029
58 Ga0075435_100000479 3300007076 Bacteria 24327
59 Ga0075435_100119093 3300007076 Bacteria 2202
60 Ga0111539_10000009 3300009094 Bacteria 375223
61 Ga0111539_10000827 3300009094 Bacteria 40203
62 Ga0111539_10008158 3300009094 Bacteria 13342
63 Ga0105245_10011450 3300009098 Bacteria 7726
64 Ga0105247_10020811 3300009101 Unclassified 3946
65 Ga0114129_10034374 3300009147 Bacteria 7159
66 Ga0114129_10052821 3300009147 Bacteria 5703
67 Ga0114129_10056045 3300009147 Bacteria 5523
68 Ga0114129_10063083 3300009147 Bacteria 5176
69 Ga0114129_10102896 3300009147 Bacteria 3949
70 Ga0114129_10465548 3300009147 Bacteria 1656
71 Ga0105242_10010855 3300009176 Bacteria 6995
72 Ga0105242_10283389 3300009176 Unclassified 1506
73 Ga0105248_10022872 3300009177 Bacteria 6941
74 Ga0105248_10077260 3300009177 Bacteria 3743
75 Ga0105248_10113628 3300009177 Bacteria 3054
76 Ga0105248_10118405 3300009177 Bacteria 2987
77 Ga0105248_10206510 3300009177 Bacteria 2213
78 Ga0105249_10000796 3300009553 Bacteria 28325
79 Ga0105249_10239045 3300009553 Bacteria 1795
80 Ga0163162_10061949 3300013306 Bacteria 3780
81 Ga0163162_10333548 3300013306 Bacteria 1649
82 Ga0163163_10051588 3300014325 Bacteria 4056
83 Ga0163163_10097327 3300014325 Bacteria 2963
84 Ga0157379_10011356 3300014968 Bacteria 7767
85 Ga0157376_10102841 3300014969 Bacteria 2500
86 Ga0207684_10168502 3300025910 Bacteria 1888
87 Ga0207707_10028076 3300025912 Unclassified 4919
88 Ga0207663_10146872 3300025916 Bacteria 1649
89 Ga0207657_10013755 3300025919 Bacteria 7923
90 Ga0207657_10082501 3300025919 Unclassified 2698
91 Ga0207646_10000884 3300025922 Bacteria 38692
92 Ga0207659_10119486 3300025926 Bacteria 2018
93 Ga0207686_10011429 3300025934 Bacteria 4862
94 Ga0207686_10072316 3300025934 Bacteria 2222
95 Ga0207709_10028857 3300025935 Bacteria 3211
96 Ga0207709_10226130 3300025935 Bacteria 1352
97 Ga0207669_10223693 3300025937 Bacteria 1383
98 Ga0207704_10022736 3300025938 Bacteria 3365
99 Ga0207704_10117028 3300025938 Bacteria 1815
100 Ga0207691_10100038 3300025940 Bacteria 2588
101 Ga0207711_10037870 3300025941 Archaea 4099
102 Ga0207711_10120890 3300025941 Bacteria 2338
103 Ga0207711_10151984 3300025941 Bacteria 2090
104 Ga0207711_10370281 3300025941 Unclassified 1328
105 Ga0207661_10000016 3300025944 Bacteria 305159
106 Ga0207651_10120032 3300025960 Bacteria 1992
107 Ga0207677_10037633 3300026023 Bacteria 3164
108 Ga0207703_10063102 3300026035 Bacteria 3037
109 Ga0207641_10138724 3300026088 Bacteria 2191
110 Ga0207641_10187606 3300026088 Bacteria 1898
111 Ga0207641_10214957 3300026088 Bacteria 1780
112 Ga0207676_10043266 3300026095 Bacteria 3467
113 Ga0207674_10271117 3300026116 Bacteria 1645
114 Ga0207675_100018026 3300026118 Bacteria 6584
115 Ga0207675_100216050 3300026118 Bacteria 1846
116 Ga0207683_10190100 3300026121 Bacteria 1864
117 Ga0207428_10000022 3300027907 Bacteria 273333
118 Ga0307408_100001965 3300031548 Bacteria 14843
119 Ga0307408_100122221 3300031548 Bacteria 2019
120 Ga0307405_10006132 3300031731 Bacteria 5885
121 Ga0307413_10013656 3300031824 Bacteria 4092
122 Ga0307410_10116329 3300031852 Bacteria 1942
123 Ga0307409_100010436 3300031995 Bacteria 5778
124 Ga0307409_100013586 3300031995 Bacteria 5250
125 Ga0307409_100013822 3300031995 Bacteria 5218
126 Ga0307416_100063960 3300032002 Bacteria 3016
127 Ga0307414_10158983 3300032004 Bacteria 1792
128 Ga0307411_10007459 3300032005 Bacteria 5574
129 Ga0307411_10100182 3300032005 Bacteria 2047
130 Ga0373927_0149253 3300035695 Bacteria 1531
131 Ga0373947_0116664 3300035725 Bacteria 1693
132 Ga0373925_0211239 3300037068 Bacteria 1546
133 Ga0439434_0004779 3300042435 Bacteria 3969
134 Ga0451577_0175697 3300042876 Bacteria 1930
135 Ga0495580_0043119 3300046472 Bacteria 3212
136 Ga0495640_0097438 3300046533 Bacteria 1934
137 Ga0495645_0010844 3300046543 Bacteria 6403
138 Ga0495645_0047994 3300046543 Bacteria 3111
139 Ga0495672_0068900 3300047320 Bacteria 2010
140 Ga0495684_0024479 3300047471 Bacteria 4647
141 Ga0496105_0196865 3300048908 Bacteria 1646
142 Ga0496110_0165986 3300048913 Bacteria 2002
143 Ga0496115_0010318 3300048918 Bacteria 6974
144 Ga0501034_0190213 3300049571 Bacteria 2015
145 Ga0501036_0180326 3300049572 Bacteria 1778
146 Ga0501039_0210176 3300049575 Bacteria 1530
147 Ga0501040_0031162 3300049576 Bacteria 3602
148 Ga0501040_0079787 3300049576 Bacteria 2266
149 Ga0501040_0117822 3300049576 Bacteria 1862
150 Ga0501041_0008187 3300049577 Bacteria 6152
151 Ga0501041_0057832 3300049577 Bacteria 2372
152 Ga0501042_0026731 3300049578 Bacteria 4055
153 Ga0501042_0027474 3300049578 Bacteria 4002
154 Ga0501042_0197716 3300049578 Bacteria 1450
155 Ga0501043_0209927 3300049579 Bacteria 1509
156 Ga0501047_0005970 3300049581 Bacteria 11447
157 Ga0501048_0080963 3300049582 Bacteria 2291
158 Ga0501070_0178341 3300049586 Bacteria 1749
159 Ga0501071_0008623 3300049587 Bacteria 6738
160 Ga0501072_0045161 3300049588 Bacteria 3464
161 Ga0501072_0106771 3300049588 Bacteria 2227
162 Ga0501075_0047036 3300049591 Unclassified 3242
163 Ga0501075_0051261 3300049591 Bacteria 3103
164 Ga0501075_0090294 3300049591 Bacteria 2324
165 Ga0501076_0006883 3300049592 Bacteria 8260
166 Ga0501076_0034302 3300049592 Unclassified 3966
167 Ga0501076_0110943 3300049592 Unclassified 2217
168 Ga0501076_0113327 3300049592 Bacteria 2193
169 Ga0501079_0073406 3300049741 Bacteria 2644
170 Ga0501079_0136231 3300049741 Unclassified 1912
171 Ga0501080_0255033 3300049742 Bacteria 1599
172 Ga0501081_0015363 3300049743 Bacteria 5051
173 Ga0501081_0016923 3300049743 Bacteria 4820
174 Ga0501081_0113772 3300049743 Bacteria 1922
175 Ga0501081_0184241 3300049743 Bacteria 1511
176 Ga0501035_0198828 3300049822 Bacteria 1720
177 Ga0501044_0222403 3300049823 Bacteria 1838
178 Ga0501045_0032466 3300049824 Unclassified 3783
179 Ga0501045_0053417 3300049824 Bacteria 2952
180 Ga0501045_0093706 3300049824 Bacteria 2221
181 Ga0501045_0107189 3300049824 Bacteria 2070
182 nmdc:mga06z11_16932_c1 3300050494 Bacteria 3296
183 nmdc:mga06z11_86317_c1 3300050494 Bacteria 1695
184 nmdc:mga05p37_10184_c1 3300050507 Bacteria 11160
185 nmdc:mga05p37_13936_c1 3300050507 Bacteria 9638
186 nmdc:mga05p37_152628_c2 3300050507 Bacteria 1336
187 nmdc:mga05p37_193301_c1 3300050507 Bacteria 2469
188 nmdc:mga05p37_60564_c1 3300050507 Unclassified 4660
189 nmdc:mga0qj67_72732_c1 3300050509 Unclassified 2746
190 nmdc:mga06r32_124983_c1 3300050510 Unclassified 2540
191 nmdc:mga06r32_126757_c1 3300050510 Bacteria 2522
192 nmdc:mga06r32_186353_c1 3300050510 Unclassified 2062
193 nmdc:mga08y16_112033_c1 3300050511 Bacteria 2840
194 nmdc:mga08y16_17257_c1 3300050511 Bacteria 7599
195 nmdc:mga08y16_21_c1 3300050511 Bacteria 254790
196 nmdc:mga08y16_59662_c1 3300050511 Bacteria 3985
197 nmdc:mga0n895_52447_c1 3300050512 Bacteria 4003
198 nmdc:mga0rr50_10632_c1 3300050513 Bacteria 5851
199 nmdc:mga0rr50_41419_c1 3300050513 Bacteria 3356
200 nmdc:mga08x19_18655_c1 3300050514 Bacteria 4251
201 nmdc:mga0a205_61292_c1 3300050515 Bacteria 3633
202 Ga0500641_0001076 3300053096 Bacteria 9721
203 Ga0500568_0022506 3300053139 Bacteria 2693
204 Ga0501084_0025752 3300054114 Bacteria 4905
205 Ga0501084_0156752 3300054114 Bacteria 1920
206 Ga0501084_0207167 3300054114 Unclassified 1655
207 Ga0501084_0298739 3300054114 Bacteria 1360
208 Ga0590071_001585 3300059421 Bacteria 5955
209 Ga0590074_001633 3300059423 Bacteria 3650
210 Ga0590075_000797 3300059424 Bacteria 8324
211 Ga0590075_025864 3300059424 Unclassified 1476
212 Ga0590077_000127 3300059426 Bacteria 20626
213 Ga0590077_000129 3300059426 Bacteria 20394
214 Ga0590077_017760 3300059426 Bacteria 1498
215 Ga0501082_0145034 3300060353 Unclassified 2061
216 Ga0501082_0174045 3300060353 Bacteria 1871
217 Ga0530510_0071618 3300061734 Unclassified 2516
218 Ga0075430_100001499
219 Ga0065707_10096290
220 Ga0070658_10048558
221 Ga0070683_100000011
222 Ga0070670_100057849
223 Ga0070670_100245770
224 Ga0068868_100050867
225 Ga0070669_100003426
226 Ga0070675_100086974
227 Ga0070674_100005164
228 Ga0070711_100150924
229 Ga0070711_100173970
230 Ga0070694_100073791
231 Ga0070708_100165328
232 Ga0070678_100191904
233 Ga0070662_100097930
234 Ga0070681_10034297
235 Ga0070707_100000507
236 Ga0070707_100081357
237 Ga0070698_100036373
238 Ga0070679_100010548
239 Ga0070679_100016396
240 Ga0070679_100049483
241 Ga0070684_100000001
242 Ga0070684_100051454
243 Ga0070697_100031635
244 Ga0070697_100117495
245 Ga0070672_100046434
246 Ga0070695_100049524
247 Ga0070695_100069865
248 Ga0070665_100000771
249 Ga0068857_100145026
250 Ga0068857_100200666
251 Ga0068859_100011529
252 Ga0068859_100210845
253 Ga0068861_100013921
254 Ga0068863_100141171
255 Ga0068858_100004236
256 Ga0068858_100048375
257 Ga0068858_100107598
258 Ga0068862_100004605
259 Ga0068862_100066066
260 Ga0097621_100009606
261 Ga0097621_100020364
262 Ga0097621_100060503
263 Ga0068871_100007978
264 Ga0075428_100000007
265 Ga0075428_100042090
266 Ga0075431_100005881
267 Ga0075431_100100719
268 Ga0075431_100105871
269 Ga0075431_100263162
270 Ga0075429_100085125
271 Ga0068865_100191671
272 Ga0075436_100058485
273 Ga0097620_100011529
274 Ga0097620_100210844
275 Ga0075435_100000479
276 Ga0075435_100119093
277 Ga0111539_10000009
278 Ga0111539_10000827
279 Ga0111539_10008158
280 Ga0105245_10011450
281 Ga0105247_10020811
282 Ga0114129_10034374
283 Ga0114129_10052821
284 Ga0114129_10056045
285 Ga0114129_10063083
286 Ga0114129_10102896
287 Ga0114129_10465548
288 Ga0105242_10010855
289 Ga0105242_10283389
290 Ga0105248_10022872
291 Ga0105248_10077260
292 Ga0105248_10113628
293 Ga0105248_10118405
294 Ga0105248_10206510
295 Ga0105249_10000796
296 Ga0105249_10239045
297 Ga0163162_10061949
298 Ga0163162_10333548
299 Ga0163163_10051588
300 Ga0163163_10097327
301 Ga0157379_10011356
302 Ga0157376_10102841
303 Ga0207684_10168502
304 Ga0207707_10028076
305 Ga0207663_10146872
306 Ga0207657_10013755
307 Ga0207657_10082501
308 Ga0207646_10000884
309 Ga0207659_10119486
310 Ga0207686_10011429
311 Ga0207686_10072316
312 Ga0207709_10028857
313 Ga0207709_10226130
314 Ga0207669_10223693
315 Ga0207704_10022736
316 Ga0207704_10117028
317 Ga0207691_10100038
318 Ga0207711_10037870
319 Ga0207711_10120890
320 Ga0207711_10151984
321 Ga0207711_10370281
322 Ga0207661_10000016
323 Ga0207651_10120032
324 Ga0207677_10037633
325 Ga0207703_10063102
326 Ga0207641_10138724
327 Ga0207641_10187606
328 Ga0207641_10214957
329 Ga0207676_10043266
330 Ga0207674_10271117
331 Ga0207675_100018026
332 Ga0207675_100216050
333 Ga0207683_10190100
334 Ga0207428_10000022
335 Ga0307408_100001965
336 Ga0307408_100122221
337 Ga0307405_10006132
338 Ga0307413_10013656
339 Ga0307410_10116329
340 Ga0307409_100010436
341 Ga0307409_100013586
342 Ga0307409_100013822
343 Ga0307416_100063960
344 Ga0307414_10158983
345 Ga0307411_10007459
346 Ga0307411_10100182
347 Ga0373927_0149253
348 Ga0373947_0116664
349 Ga0373925_0211239
350 Ga0439434_0004779
351 Ga0451577_0175697
352 Ga0495580_0043119
353 Ga0495640_0097438
354 Ga0495645_0010844
355 Ga0495645_0047994
356 Ga0495672_0068900
357 Ga0495684_0024479
358 Ga0496105_0196865
359 Ga0496110_0165986
360 Ga0496115_0010318
361 Ga0501034_0190213
362 Ga0501036_0180326
363 Ga0501039_0210176
364 Ga0501040_0031162
365 Ga0501040_0079787
366 Ga0501040_0117822
367 Ga0501041_0008187
368 Ga0501041_0057832
369 Ga0501042_0026731
370 Ga0501042_0027474
371 Ga0501042_0197716
372 Ga0501043_0209927
373 Ga0501047_0005970
374 Ga0501048_0080963
375 Ga0501070_0178341
376 Ga0501071_0008623
377 Ga0501072_0045161
378 Ga0501072_0106771
379 Ga0501075_0047036
380 Ga0501075_0051261
381 Ga0501075_0090294
382 Ga0501076_0006883
383 Ga0501076_0034302
384 Ga0501076_0110943
385 Ga0501076_0113327
386 Ga0501079_0073406
387 Ga0501079_0136231
388 Ga0501080_0255033
389 Ga0501081_0015363
390 Ga0501081_0016923
391 Ga0501081_0113772
392 Ga0501081_0184241
393 Ga0501035_0198828
394 Ga0501044_0222403
395 Ga0501045_0032466
396 Ga0501045_0053417
397 Ga0501045_0093706
398 Ga0501045_0107189
399 nmdc:mga06z11_16932_c1
400 nmdc:mga06z11_86317_c1
401 nmdc:mga05p37_10184_c1
402 nmdc:mga05p37_13936_c1
403 nmdc:mga05p37_152628_c2
404 nmdc:mga05p37_193301_c1
405 nmdc:mga05p37_60564_c1
406 nmdc:mga0qj67_72732_c1
407 nmdc:mga06r32_124983_c1
408 nmdc:mga06r32_126757_c1
409 nmdc:mga06r32_186353_c1
410 nmdc:mga08y16_112033_c1
411 nmdc:mga08y16_17257_c1
412 nmdc:mga08y16_21_c1
413 nmdc:mga08y16_59662_c1
414 nmdc:mga0n895_52447_c1
415 nmdc:mga0rr50_10632_c1
416 nmdc:mga0rr50_41419_c1
417 nmdc:mga08x19_18655_c1
418 nmdc:mga0a205_61292_c1
419 Ga0500641_0001076
420 Ga0500568_0022506
421 Ga0501084_0025752
422 Ga0501084_0156752
423 Ga0501084_0207167
424 Ga0501084_0298739
425 Ga0590071_001585
426 Ga0590074_001633
427 Ga0590075_000797
428 Ga0590075_025864
429 Ga0590077_000127
430 Ga0590077_000129
431 Ga0590077_017760
432 Ga0501082_0145034
433 Ga0501082_0174045
434 Ga0530510_0071618

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

259

360

0.93

PF04389

Peptidase_M28

Peptidase family M28

141

275

0.88

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

156

461

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lji-assembly1.cif.gz_B-2 structure of poly(aspartic acid) hydrolase pahz2 with gd+3 bound 0.8964 26 415
7lji-assembly1.cif.gz_B-2 structure of poly(aspartic acid) hydrolase pahz2 with gd+3 bound 0.8734 26 415
5xoy-assembly1.cif.gz_B-2 crystal structure of lysk from thermus thermophilus in complex with lysine 0.8098 49 414
4g1p-assembly1.cif.gz_A-2 structural and mechanistic basis of substrate recognition by novel di-peptidase dug1p from saccharomyces cerevisiae 0.8074 35 414
5xoy-assembly1.cif.gz_B-2 crystal structure of lysk from thermus thermophilus in complex with lysine 0.7991 49 414
ID Description Score Start End Superfamily
af_L7N690_167_284_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8977 213 326 3.40.630.10
3ramD02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8706 211 329 3.30.70.360
4q7aC01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8615 49 414 3.40.630.10
af_P65807_4_190_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8569 36 202 3.40.630.10
5xoyB01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8525 49 414 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A3M1RLJ9-F1-model_v4 Peptidase M20 0.972 210 414
AF-A0A1F2U8V4-F1-model_v4 Peptidase M20 dimerisation domain-containing protein 0.9653 54 413 GO:0016787
GO:0046872
AF-A0A2E9MXL3-F1-model_v4 Peptidase M20 0.9619 32 415 GO:0016787
GO:0046872
AF-A0A844D7G7-F1-model_v4 Peptidase dimerization domain-containing protein 0.9587 210 411 GO:0016787
AF-A0A395YR68-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9526 29 286 GO:0016787

Map