F328458

General Info

Members Datasets Scaffolds Average Seq Length
217 138 434 311

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100215399|Ga0070714_1002153991
Length 348
Sequence MKHFQSWPHFRPPTGVSAVKDLLCTGDLGRDNLLTLLDLGERMKRDPLEHRHLLRGETVVLYFNKPSTRTRISFETAVAHLGATPLSVGPHELQLDRGETIEDTARVIGSYARAFVIRTFSDEDVARFAAATPIPVVNALTDGHHPCQSVGDLMTLREQLGGLEGRRLAFVGDGDNVVHSLLEACALVGMDIAVATPPGFEPAPEVVLRAVELARDSGAHVYVTDDPADAVRGADAVYTDVWLSMGVSELERAARVQAFRPYHVDERLMSFAAPHAIFMHCLPAHRGEEVTAAVFDGERSRVFEQAANRLPSEQAILYALVTGMLPVPPAAEEPVLLPADEHALAGAL

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
59 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
62 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
65 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
68 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
78 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
79 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
80 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
83 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
88 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
91 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
94 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
109 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
110 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
119 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
120 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
121 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
133 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
136 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
137 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
138 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.08
Metatranscriptomes 0
Isolates 0.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.76
Nodule 0
Rhizoplane 4.15
Rhizosphere 87.56
Stem 0
Stem Tuber 0
Unclassified 0.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100215399 3300005435 Bacteria 1763
2 JGI24740J21852_10000314 3300001979 Bacteria 20684
3 JGI25406J46586_10029366 3300003203 Bacteria 2082
4 rootH2_10018058 3300003320 Bacteria 6040
5 rootH2_10020440 3300003320 Bacteria 2555
6 rootH1_10097526 3300003323 Bacteria 4249
7 rootH1_10131768 3300003323 Bacteria 4410
8 Ga0070658_10298707 3300005327 Bacteria 1373
9 Ga0070683_100017329 3300005329 Bacteria 6366
10 Ga0070683_100536280 3300005329 Bacteria 1119
11 Ga0068868_100299679 3300005338 Bacteria 1365
12 Ga0070668_100396149 3300005347 Bacteria 1178
13 Ga0070674_100294146 3300005356 Bacteria 1292
14 Ga0070659_100107387 3300005366 Bacteria 2251
15 Ga0070714_100000001 3300005435 Bacteria 469087
16 Ga0070714_100009611 3300005435 Bacteria 7611
17 Ga0070714_100031506 3300005435 Bacteria 4425
18 Ga0070714_100031907 3300005435 Bacteria 4397
19 Ga0070684_100114513 3300005535 Bacteria 2421
20 Ga0070672_100001221 3300005543 Bacteria 15782
21 Ga0070665_100024199 3300005548 Bacteria 6116
22 Ga0070665_100230711 3300005548 Bacteria 1851
23 Ga0068855_100000013 3300005563 Bacteria 234207
24 Ga0068856_100048361 3300005614 Bacteria 4191
25 Ga0068852_100014523 3300005616 Bacteria 6068
26 Ga0068859_100037523 3300005617 Bacteria 4863
27 Ga0081455_10133324 3300005937 Bacteria 1939
28 Ga0081538_10036622 3300005981 Bacteria 3198
29 Ga0081539_10018222 3300005985 Bacteria 4885
30 Ga0081539_10056327 3300005985 Bacteria 2182
31 Ga0070717_10000819 3300006028 Bacteria 20495
32 Ga0075365_10019353 3300006038 Bacteria 4201
33 Ga0075364_10039358 3300006051 Bacteria 3065
34 Ga0075366_10027650 3300006195 Bacteria 3328
35 Ga0075430_100004988 3300006846 Bacteria 11173
36 Ga0075431_100014814 3300006847 Bacteria 7894
37 Ga0075434_100565832 3300006871 Bacteria 1156
38 Ga0075429_100000726 3300006880 Bacteria 25846
39 Ga0068865_100217281 3300006881 Bacteria 1493
40 Ga0097620_100037521 3300006931 Bacteria 4863
41 Ga0111539_10055877 3300009094 Bacteria 4693
42 Ga0105245_10129976 3300009098 Bacteria 2361
43 Ga0114129_11038202 3300009147 Bacteria 1030
44 Ga0105243_10310926 3300009148 Bacteria 1432
45 Ga0105249_10496799 3300009553 Bacteria 1265
46 Ga0105239_10712291 3300010375 Bacteria 1148
47 Ga0157378_10532803 3300013297 Bacteria 1177
48 Ga0157372_10584177 3300013307 Bacteria 1302
49 Ga0157375_10610405 3300013308 Bacteria 1249
50 Ga0157379_10002926 3300014968 Bacteria 14413
51 Ga0157376_10048279 3300014969 Bacteria 3519
52 Ga0207687_10106929 3300025927 Bacteria 2069
53 Ga0207664_10000007 3300025929 Bacteria 374590
54 Ga0207664_10007293 3300025929 Bacteria 7667
55 Ga0207664_10108045 3300025929 Bacteria 2309
56 Ga0207664_10121476 3300025929 Bacteria 2187
57 Ga0207669_10181967 3300025937 Bacteria 1508
58 Ga0207691_10000268 3300025940 Bacteria 51406
59 Ga0207679_10287770 3300025945 Bacteria 1411
60 Ga0207667_10002827 3300025949 Bacteria 21543
61 Ga0207667_10145903 3300025949 Bacteria 2436
62 Ga0207712_10275564 3300025961 Bacteria 1371
63 Ga0207677_10035345 3300026023 Bacteria 3245
64 Ga0207708_10051453 3300026075 Bacteria 3136
65 Ga0207675_100427133 3300026118 Bacteria 1309
66 Ga0207698_10081729 3300026142 Bacteria 2609
67 Ga0207698_10137907 3300026142 Bacteria 2096
68 Ga0207428_10080981 3300027907 Bacteria 2536
69 Ga0268266_10173893 3300028379 Bacteria 1956
70 Ga0268266_10232827 3300028379 Bacteria 1697
71 Ga0265322_10010179 3300028654 Bacteria 2726
72 Ga0265338_10002003 3300028800 Bacteria 31634
73 Ga0265338_10017389 3300028800 Bacteria 7752
74 Ga0265329_10006883 3300031242 Bacteria 4455
75 Ga0265339_10026569 3300031249 Bacteria 3314
76 Ga0265327_10004039 3300031251 Bacteria 13328
77 Ga0265313_10013453 3300031595 Bacteria 4910
78 Ga0307508_10019365 3300031616 Bacteria 6186
79 Ga0265314_10003661 3300031711 Bacteria 14745
80 Ga0307516_10001728 3300031730 Bacteria 30002
81 Ga0307413_10276884 3300031824 Bacteria 1260
82 Ga0307409_100382805 3300031995 Bacteria 1338
83 Ga0373956_0087320 3300035119 Bacteria 1436
84 Ga0373937_0009935 3300036401 Bacteria 8297
85 Ga0395901_0093956 3300038443 Bacteria 3141
86 Ga0466965_0050022 3300044683 Bacteria 2072
87 Ga0466963_0013281 3300044694 Bacteria 5055
88 Ga0466960_0139356 3300044901 Bacteria 1287
89 Ga0466967_0239546 3300045976 Bacteria 1730
90 Ga0495651_0080738 3300046462 Bacteria 2456
91 Ga0495618_0060729 3300046514 Bacteria 2397
92 Ga0495667_0074412 3300046559 Bacteria 2211
93 Ga0495635_0025775 3300046663 Bacteria 4096
94 Ga0495613_0171181 3300046689 Bacteria 1541
95 Ga0495672_0042362 3300047320 Bacteria 2746
96 Ga0495672_0147701 3300047320 Bacteria 1222
97 Ga0495680_0019803 3300047322 Bacteria 5673
98 Ga0495684_0067613 3300047471 Bacteria 2717
99 Ga0496100_0037465 3300048903 Bacteria 3066
100 Ga0496103_0024966 3300048906 Bacteria 3609
101 Ga0496104_0058042 3300048907 Bacteria 3663
102 Ga0496105_0064683 3300048908 Bacteria 3018
103 Ga0496110_0099496 3300048913 Bacteria 2607
104 Ga0496111_0033967 3300048914 Bacteria 3640
105 Ga0496112_0495679 3300048915 Bacteria 1157
106 Ga0496114_0007995 3300048917 Bacteria 8368
107 Ga0496115_0229602 3300048918 Bacteria 1531
108 Ga0496120_0003846 3300048923 Bacteria 13193
109 Ga0496121_0001211 3300048924 Bacteria 44972
110 Ga0496121_0012766 3300048924 Bacteria 9100
111 Ga0496126_0119805 3300048929 Bacteria 2284
112 Ga0501031_0029352 3300049568 Bacteria 3587
113 Ga0501031_0037444 3300049568 Bacteria 3165
114 Ga0501033_0088266 3300049570 Bacteria 2269
115 Ga0501034_0003033 3300049571 Bacteria 19416
116 Ga0501034_0056054 3300049571 Bacteria 3967
117 Ga0501036_0030653 3300049572 Bacteria 4542
118 Ga0501036_0058928 3300049572 Bacteria 3253
119 Ga0501036_0474263 3300049572 Bacteria 1042
120 Ga0501037_0007439 3300049573 Bacteria 8009
121 Ga0501038_0003425 3300049574 Bacteria 14785
122 Ga0501039_0007813 3300049575 Bacteria 8155
123 Ga0501039_0193247 3300049575 Bacteria 1600
124 Ga0501039_0329688 3300049575 Bacteria 1200
125 Ga0501040_0007331 3300049576 Bacteria 7143
126 Ga0501040_0014486 3300049576 Bacteria 5196
127 Ga0501040_0041634 3300049576 Unclassified 3129
128 Ga0501041_0015046 3300049577 Bacteria 4595
129 Ga0501041_0060879 3300049577 Bacteria 2311
130 Ga0501042_0003844 3300049578 Bacteria 9496
131 Ga0501042_0017756 3300049578 Bacteria 4912
132 Ga0501042_0044621 3300049578 Bacteria 3159
133 Ga0501042_0144962 3300049578 Bacteria 1712
134 Ga0501042_0228238 3300049578 Bacteria 1343
135 Ga0501043_0122204 3300049579 Bacteria 2042
136 Ga0501043_0320086 3300049579 Bacteria 1183
137 Ga0501046_0131718 3300049580 Bacteria 1896
138 Ga0501046_0177755 3300049580 Bacteria 1593
139 Ga0501047_0008621 3300049581 Bacteria 9629
140 Ga0501047_0027688 3300049581 Bacteria 5461
141 Ga0501047_0083830 3300049581 Bacteria 3063
142 Ga0501047_0474809 3300049581 Bacteria 1078
143 Ga0501048_0017260 3300049582 Bacteria 5319
144 Ga0501048_0019625 3300049582 Bacteria 4958
145 Ga0501048_0029261 3300049582 Bacteria 3996
146 Ga0501048_0137760 3300049582 Bacteria 1725
147 Ga0501067_0040541 3300049583 Bacteria 2586
148 Ga0501067_0041516 3300049583 Bacteria 2554
149 Ga0501068_0013261 3300049584 Bacteria 4687
150 Ga0501068_0096758 3300049584 Bacteria 1826
151 Ga0501069_0006902 3300049585 Bacteria 5934
152 Ga0501069_0024909 3300049585 Bacteria 3267
153 Ga0501069_0144923 3300049585 Bacteria 1363
154 Ga0501070_0023010 3300049586 Bacteria 5216
155 Ga0501071_0002568 3300049587 Bacteria 11079
156 Ga0501071_0028667 3300049587 Bacteria 3925
157 Ga0501071_0059554 3300049587 Bacteria 2763
158 Ga0501072_0022184 3300049588 Bacteria 4926
159 Ga0501072_0031680 3300049588 Bacteria 4141
160 Ga0501072_0090996 3300049588 Bacteria 2422
161 Ga0501073_0016854 3300049589 Bacteria 5291
162 Ga0501074_0004316 3300049590 Bacteria 10152
163 Ga0501074_0038369 3300049590 Bacteria 3472
164 Ga0501074_0039647 3300049590 Bacteria 3411
165 Ga0501074_0113954 3300049590 Bacteria 1934
166 Ga0501075_0108719 3300049591 Bacteria 2108
167 Ga0501075_0383847 3300049591 Bacteria 1071
168 Ga0501076_0024074 3300049592 Bacteria 4703
169 Ga0501076_0059538 3300049592 Bacteria 3038
170 Ga0501076_0164623 3300049592 Bacteria 1807
171 Ga0501076_0501622 3300049592 Bacteria 1000
172 Ga0501076_0514050 3300049592 Bacteria 987
173 Ga0501079_0002819 3300049741 Bacteria 12678
174 Ga0501079_0032194 3300049741 Bacteria 4031
175 Ga0501079_0044132 3300049741 Bacteria 3441
176 Ga0501079_0064057 3300049741 Bacteria 2836
177 Ga0501079_0065575 3300049741 Bacteria 2801
178 Ga0501079_0113188 3300049741 Bacteria 2109
179 Ga0501079_0286995 3300049741 Bacteria 1287
180 Ga0501080_0034354 3300049742 Bacteria 4733
181 Ga0501080_0071049 3300049742 Bacteria 3237
182 Ga0501080_0296490 3300049742 Bacteria 1467
183 Ga0501081_0021105 3300049743 Bacteria 4347
184 Ga0501081_0133971 3300049743 Bacteria 1772
185 Ga0501083_0010411 3300049744 Bacteria 6544
186 Ga0501083_0012757 3300049744 Bacteria 5876
187 Ga0501083_0029464 3300049744 Bacteria 3774
188 Ga0501083_0105222 3300049744 Bacteria 1858
189 Ga0501035_0010145 3300049822 Bacteria 8742
190 Ga0501035_0074713 3300049822 Bacteria 2998
191 Ga0501035_0296239 3300049822 Bacteria 1364
192 Ga0501044_0005141 3300049823 Bacteria 14593
193 Ga0501044_0154949 3300049823 Bacteria 2271
194 Ga0501045_0124052 3300049824 Bacteria 1918
195 nmdc:mga00v17_7199_c1 3300050491 Bacteria 5928
196 nmdc:mga0yw44_13147_c1 3300050492 Bacteria 4346
197 nmdc:mga05p37_807848_c1 3300050507 Bacteria 1025
198 nmdc:mga09592_351_c1 3300050508 Bacteria 33821
199 nmdc:mga0qj67_4995_c1 3300050509 Bacteria 9642
200 nmdc:mga06r32_230_c1 3300050510 Bacteria 45414
201 nmdc:mga06r32_325842_c1 3300050510 Bacteria 1521
202 nmdc:mga08y16_51432_c1 3300050511 Bacteria 4311
203 Ga0495619_0008727 3300053085 Bacteria 6410
204 Ga0500616_0082265 3300053153 Bacteria 1615
205 Ga0501084_0009000 3300054114 Bacteria 8260
206 Ga0501084_0016098 3300054114 Bacteria 6209
207 Ga0501084_0090358 3300054114 Bacteria 2571
208 Ga0501084_0198732 3300054114 Bacteria 1691
209 Ga0501084_0408046 3300054114 Bacteria 1148
210 Ga0501082_0081144 3300060353 Bacteria 2799
211 Ga0501082_0097853 3300060353 Bacteria 2537
212 Ga0501082_0216024 3300060353 Bacteria 1668
213 Ga0501082_0541637 3300060353 Bacteria 1018
214 Ga0530510_0008597 3300061734 Bacteria 7132
215 Ga0530510_0159840 3300061734 Bacteria 1666
216 2866614829 2866612099 Bacteria 7543886
217 2899363253 2899359706 Bacteria 10940472
218 Ga0070714_100215399
219 JGI24740J21852_10000314
220 JGI25406J46586_10029366
221 rootH2_10018058
222 rootH2_10020440
223 rootH1_10097526
224 rootH1_10131768
225 Ga0070658_10298707
226 Ga0070683_100017329
227 Ga0070683_100536280
228 Ga0068868_100299679
229 Ga0070668_100396149
230 Ga0070674_100294146
231 Ga0070659_100107387
232 Ga0070714_100000001
233 Ga0070714_100009611
234 Ga0070714_100031506
235 Ga0070714_100031907
236 Ga0070684_100114513
237 Ga0070672_100001221
238 Ga0070665_100024199
239 Ga0070665_100230711
240 Ga0068855_100000013
241 Ga0068856_100048361
242 Ga0068852_100014523
243 Ga0068859_100037523
244 Ga0081455_10133324
245 Ga0081538_10036622
246 Ga0081539_10018222
247 Ga0081539_10056327
248 Ga0070717_10000819
249 Ga0075365_10019353
250 Ga0075364_10039358
251 Ga0075366_10027650
252 Ga0075430_100004988
253 Ga0075431_100014814
254 Ga0075434_100565832
255 Ga0075429_100000726
256 Ga0068865_100217281
257 Ga0097620_100037521
258 Ga0111539_10055877
259 Ga0105245_10129976
260 Ga0114129_11038202
261 Ga0105243_10310926
262 Ga0105249_10496799
263 Ga0105239_10712291
264 Ga0157378_10532803
265 Ga0157372_10584177
266 Ga0157375_10610405
267 Ga0157379_10002926
268 Ga0157376_10048279
269 Ga0207687_10106929
270 Ga0207664_10000007
271 Ga0207664_10007293
272 Ga0207664_10108045
273 Ga0207664_10121476
274 Ga0207669_10181967
275 Ga0207691_10000268
276 Ga0207679_10287770
277 Ga0207667_10002827
278 Ga0207667_10145903
279 Ga0207712_10275564
280 Ga0207677_10035345
281 Ga0207708_10051453
282 Ga0207675_100427133
283 Ga0207698_10081729
284 Ga0207698_10137907
285 Ga0207428_10080981
286 Ga0268266_10173893
287 Ga0268266_10232827
288 Ga0265322_10010179
289 Ga0265338_10002003
290 Ga0265338_10017389
291 Ga0265329_10006883
292 Ga0265339_10026569
293 Ga0265327_10004039
294 Ga0265313_10013453
295 Ga0307508_10019365
296 Ga0265314_10003661
297 Ga0307516_10001728
298 Ga0307413_10276884
299 Ga0307409_100382805
300 Ga0373956_0087320
301 Ga0373937_0009935
302 Ga0395901_0093956
303 Ga0466965_0050022
304 Ga0466963_0013281
305 Ga0466960_0139356
306 Ga0466967_0239546
307 Ga0495651_0080738
308 Ga0495618_0060729
309 Ga0495667_0074412
310 Ga0495635_0025775
311 Ga0495613_0171181
312 Ga0495672_0042362
313 Ga0495672_0147701
314 Ga0495680_0019803
315 Ga0495684_0067613
316 Ga0496100_0037465
317 Ga0496103_0024966
318 Ga0496104_0058042
319 Ga0496105_0064683
320 Ga0496110_0099496
321 Ga0496111_0033967
322 Ga0496112_0495679
323 Ga0496114_0007995
324 Ga0496115_0229602
325 Ga0496120_0003846
326 Ga0496121_0001211
327 Ga0496121_0012766
328 Ga0496126_0119805
329 Ga0501031_0029352
330 Ga0501031_0037444
331 Ga0501033_0088266
332 Ga0501034_0003033
333 Ga0501034_0056054
334 Ga0501036_0030653
335 Ga0501036_0058928
336 Ga0501036_0474263
337 Ga0501037_0007439
338 Ga0501038_0003425
339 Ga0501039_0007813
340 Ga0501039_0193247
341 Ga0501039_0329688
342 Ga0501040_0007331
343 Ga0501040_0014486
344 Ga0501040_0041634
345 Ga0501041_0015046
346 Ga0501041_0060879
347 Ga0501042_0003844
348 Ga0501042_0017756
349 Ga0501042_0044621
350 Ga0501042_0144962
351 Ga0501042_0228238
352 Ga0501043_0122204
353 Ga0501043_0320086
354 Ga0501046_0131718
355 Ga0501046_0177755
356 Ga0501047_0008621
357 Ga0501047_0027688
358 Ga0501047_0083830
359 Ga0501047_0474809
360 Ga0501048_0017260
361 Ga0501048_0019625
362 Ga0501048_0029261
363 Ga0501048_0137760
364 Ga0501067_0040541
365 Ga0501067_0041516
366 Ga0501068_0013261
367 Ga0501068_0096758
368 Ga0501069_0006902
369 Ga0501069_0024909
370 Ga0501069_0144923
371 Ga0501070_0023010
372 Ga0501071_0002568
373 Ga0501071_0028667
374 Ga0501071_0059554
375 Ga0501072_0022184
376 Ga0501072_0031680
377 Ga0501072_0090996
378 Ga0501073_0016854
379 Ga0501074_0004316
380 Ga0501074_0038369
381 Ga0501074_0039647
382 Ga0501074_0113954
383 Ga0501075_0108719
384 Ga0501075_0383847
385 Ga0501076_0024074
386 Ga0501076_0059538
387 Ga0501076_0164623
388 Ga0501076_0501622
389 Ga0501076_0514050
390 Ga0501079_0002819
391 Ga0501079_0032194
392 Ga0501079_0044132
393 Ga0501079_0064057
394 Ga0501079_0065575
395 Ga0501079_0113188
396 Ga0501079_0286995
397 Ga0501080_0034354
398 Ga0501080_0071049
399 Ga0501080_0296490
400 Ga0501081_0021105
401 Ga0501081_0133971
402 Ga0501083_0010411
403 Ga0501083_0012757
404 Ga0501083_0029464
405 Ga0501083_0105222
406 Ga0501035_0010145
407 Ga0501035_0074713
408 Ga0501035_0296239
409 Ga0501044_0005141
410 Ga0501044_0154949
411 Ga0501045_0124052
412 nmdc:mga00v17_7199_c1
413 nmdc:mga0yw44_13147_c1
414 nmdc:mga05p37_807848_c1
415 nmdc:mga09592_351_c1
416 nmdc:mga0qj67_4995_c1
417 nmdc:mga06r32_230_c1
418 nmdc:mga06r32_325842_c1
419 nmdc:mga08y16_51432_c1
420 Ga0495619_0008727
421 Ga0500616_0082265
422 Ga0501084_0009000
423 Ga0501084_0016098
424 Ga0501084_0090358
425 Ga0501084_0198732
426 Ga0501084_0408046
427 Ga0501082_0081144
428 Ga0501082_0097853
429 Ga0501082_0216024
430 Ga0501082_0541637
431 Ga0530510_0008597
432 Ga0530510_0159840
433 2866614829
434 2899363253

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00185

OTCace

Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain

164

320

0.98

PF02729

OTCace_N

Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain

20

158

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gd5-assembly1.cif.gz_F crystal structure of ornithine carbamoyltransferase from gloeobacter violaceus 0.984 17 318
4nf2-assembly1.cif.gz_C crystal structure of anabolic ornithine carbamoyltransferase from bacillus anthracis in complex with carbamoyl phosphate and l-norvaline 0.9749 16 318
7nou-assembly2.cif.gz_D crystal structure of mycobacterium tuberculosis argf in complex with (3,5-dichlorophenyl)boronic acid. 0.9732 16 320
4ep1-assembly1.cif.gz_A crystal structure of anabolic ornithine carbamoyltransferase from bacillus anthracis 0.9714 16 320
7nnv-assembly2.cif.gz_F error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9712 16 320
ID Description Score Start End Superfamily
2ef0A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase 0.9765 146 303 3.40.50.1370
1vlvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase 0.9657 142 296 3.40.50.1370
1c9yA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase 0.9607 147 303 3.40.50.1370
af_P11725_168_295_3.40.50.1370 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase 0.9597 142 269 3.40.50.1370
1vlvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase 0.9593 142 296 3.40.50.1370
ID Description Score Start End GO Terms
AF-I3D588-F1-model_v4 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain protein 0.9865 59 202 GO:0004585
GO:0016597
GO:0019240
GO:0042450
AF-A0A658JDB3-F1-model_v4 deleted 0.9854 72 232
AF-A0A3D1HBA6-F1-model_v4 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.9838 58 177 GO:0004585
GO:0016597
GO:0019240
GO:0042450
AF-A0A800M9I7-F1-model_v4 Ornithine carbamoyltransferase 0.9828 57 171 GO:0004585
GO:0016597
GO:0019240
GO:0042450
AF-A0A0P9H196-F1-model_v4 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.9825 111 318 GO:0004585
GO:0016597
GO:0019240
GO:0042450

Map