F328178

General Info

Members Datasets Scaffolds Average Seq Length
216 191 191 195

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221610|2644067506
Length 220
Sequence SAMDSKLLLTRVSKMPRANLARKGTFRVDTDLRRVVLIVSLLNLGYFGVELLVALSIGSVSLMADSVDFLEDASVNMLIFFALAWTARTRARVGMAMAFILLVPALAFLWTAWAKFMDPVPPEPFALSLTGLGALVVNLFCAYLLVAYRHTSGSLTRAAFLSARNDAFANVAIIAAGLATAYLWQSAWPDLIVGLGIALMNMDAAREVWEAASEEHDVAA

Samples

Sample ID Description Type Environment
1 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
2 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
3 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
4 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
5 2643221557 Ensifer sp. Root558 Isolate Unclassified
6 2643221583 Caulobacter sp. Root655 Isolate Unclassified
7 2643221610 Ensifer sp. Root74 Isolate Unclassified
8 2643221618 Ensifer sp. Root231 Isolate Unclassified
9 2643221626 Ensifer sp. Root31 Isolate Unclassified
10 2643221655 Ensifer sp. Root1252 Isolate Unclassified
11 2643221659 Ensifer sp. Root127 Isolate Unclassified
12 2643221668 Ensifer sp. Root423 Isolate Unclassified
13 2643221675 Ensifer sp. Root1298 Isolate Unclassified
14 2643221680 Ensifer sp. Root1312 Isolate Unclassified
15 2643221698 Ensifer sp. Root142 Isolate Unclassified
16 2643221712 Ensifer sp. Root258 Isolate Unclassified
17 2643221723 Ensifer sp. Root278 Isolate Unclassified
18 2643221726 Ensifer sp. Root954 Isolate Unclassified
19 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
20 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
21 2838061910 Rhizobium phaseoli L15 Isolate Nodule
22 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
23 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
24 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
25 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
26 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
27 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
28 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
29 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
30 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
35 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
36 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
37 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
38 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
39 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
40 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
41 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
42 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
43 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
44 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
45 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
46 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
47 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
48 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
49 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
50 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
51 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
52 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
53 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
54 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
55 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
56 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
57 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
58 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
59 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
62 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
77 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
78 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
79 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
80 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
81 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
82 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
87 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
91 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
118 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
125 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
126 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
127 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
128 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
129 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
130 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
131 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
132 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
133 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
134 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
135 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
136 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
137 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
138 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
139 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
140 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
141 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
142 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
143 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
144 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
145 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
146 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
147 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
148 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
149 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
150 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
151 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
152 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
153 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
154 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
155 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
156 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
157 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
158 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
159 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
160 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
163 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
166 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
167 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
168 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
169 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
180 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
181 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
182 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
183 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
184 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
185 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
186 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
187 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
188 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
189 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
190 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
191 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.43
Metatranscriptomes 0
Isolates 11.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.81
Nodule 3.24
Rhizoplane 2.78
Rhizosphere 66.67
Stem 0
Stem Tuber 0
Unclassified 12.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1000040 3300002987 Bacteria 68143
2 JGI25151J46595_10002301 3300003187 Bacteria 11674
3 rootH2_10105336 3300003320 Bacteria 6169
4 rootH1_10056810 3300003323 Bacteria 3929
5 rootH1_10093872 3300003323 Bacteria 1790
6 JGI25160J50197_1000128 3300003354 Bacteria 68143
7 JGI25161J50226_1007062 3300003374 Bacteria 1942
8 Ga0055526_1000675 3300003771 Bacteria 26151
9 Ga0055524_1000319 3300003775 Bacteria 45208
10 Ga0055524_1024404 3300003775 Bacteria 1919
11 Ga0055536_1006591 3300003781 Bacteria 5369
12 Ga0065165_1000013 3300005262 Bacteria 301887
13 Ga0070658_10057501 3300005327 Bacteria 3163
14 Ga0070676_10507339 3300005328 Bacteria 857
15 Ga0070683_100033432 3300005329 Unclassified 4689
16 Ga0070660_100115735 3300005339 Bacteria 2137
17 Ga0070661_100007612 3300005344 Bacteria 7469
18 Ga0070671_100562863 3300005355 Bacteria 984
19 Ga0070674_100005589 3300005356 Bacteria 7276
20 Ga0070673_100046369 3300005364 Bacteria 3375
21 Ga0070714_100010057 3300005435 Bacteria 7465
22 Ga0070710_10001439 3300005437 Bacteria 11241
23 Ga0070711_100007633 3300005439 Bacteria 6584
24 Ga0070663_100371798 3300005455 Bacteria 1162
25 Ga0070678_100148168 3300005456 Bacteria 1887
26 Ga0068867_100138507 3300005459 Bacteria 1900
27 Ga0070684_100055490 3300005535 Plasmid 3454
28 Ga0068853_100204509 3300005539 Unclassified 1798
29 Ga0070693_100049965 3300005547 Bacteria 2388
30 Ga0070665_100071032 3300005548 Bacteria 3488
31 Ga0068855_100165053 3300005563 Plasmid 2511
32 Ga0068857_100186900 3300005577 Bacteria 1886
33 Ga0068854_100057842 3300005578 Bacteria 2797
34 Ga0068854_100484696 3300005578 Bacteria 1039
35 Ga0068856_100288976 3300005614 Unclassified 1656
36 Ga0068856_100297365 3300005614 Bacteria 1632
37 Ga0068856_100586335 3300005614 Bacteria 1136
38 Ga0068852_100106913 3300005616 Bacteria 2537
39 Ga0068852_100135022 3300005616 Unclassified 2277
40 Ga0068852_100709866 3300005616 Bacteria 1016
41 Ga0068851_10088281 3300005834 Unclassified 1629
42 Ga0070712_100859285 3300006175 Bacteria 781
43 Ga0075367_10044502 3300006178 Bacteria 2603
44 Ga0075428_100632367 3300006844 Unclassified 1142
45 Ga0075431_100009577 3300006847 Bacteria 9729
46 Ga0068865_100213803 3300006881 Bacteria 1504
47 Ga0105240_10099909 3300009093 Bacteria 3531
48 Ga0105243_11194678 3300009148 Bacteria 773
49 Ga0105241_10112649 3300009174 Bacteria 2180
50 Ga0105242_11202439 3300009176 Bacteria 777
51 Ga0105239_10060072 3300010375 Unclassified 4172
52 Ga0157327_1009199 3300012512 Bacteria 904
53 Ga0157373_10020518 3300013100 Unclassified 4802
54 Ga0157369_10177463 3300013105 Unclassified 2242
55 Ga0171463_1003 3300013249 Bacteria 695693
56 Ga0157374_10025174 3300013296 Bacteria 5340
57 Ga0157372_10070548 3300013307 Bacteria 3931
58 Ga0157372_10237643 3300013307 Bacteria 2114
59 Ga0157372_10322891 3300013307 Bacteria 1797
60 Ga0157372_10429609 3300013307 Bacteria 1539
61 Ga0157375_11505300 3300013308 Bacteria 794
62 Ga0163163_10020929 3300014325 Bacteria 6168
63 Ga0182007_10128124 3300015262 Bacteria 852
64 Ga0183363_1324 3300015690 Bacteria 6185
65 Ga0214544_1000010 3300021320 Bacteria 270164
66 Ga0214542_1000023 3300021321 Bacteria 191557
67 Ga0214543_1000019 3300021327 Bacteria 267908
68 Ga0209436_100194 3300025208 Bacteria 28386
69 Ga0209148_1000037 3300025254 Bacteria 494767
70 Ga0209455_1000036 3300025272 Bacteria 473309
71 Ga0209130_1000034 3300025284 Bacteria 302439
72 Ga0209676_1002535 3300025292 Bacteria 12714
73 Ga0209025_1000314 3300025294 Bacteria 107720
74 Ga0209564_1000013 3300025295 Bacteria 775755
75 Ga0209050_1017079 3300025298 Bacteria 2920
76 Ga0209256_1000042 3300025299 Bacteria 341821
77 Ga0209256_1005824 3300025299 Bacteria 6862
78 Ga0207426_1000006 3300025302 Bacteria 1025969
79 Ga0209051_1063631 3300025303 Bacteria 1147
80 Ga0209257_1002099 3300025304 Bacteria 20905
81 Ga0207656_10005678 3300025321 Unclassified 4432
82 Ga0207692_10000620 3300025898 Bacteria 12475
83 Ga0207699_10001377 3300025906 Bacteria 11576
84 Ga0207645_10511509 3300025907 Bacteria 813
85 Ga0207705_10620954 3300025909 Bacteria 840
86 Ga0207654_10005661 3300025911 Bacteria 6316
87 Ga0207654_10051611 3300025911 Bacteria 2368
88 Ga0207695_10122708 3300025913 Bacteria 2564
89 Ga0207663_10045094 3300025916 Bacteria 2710
90 Ga0207700_10375729 3300025928 Bacteria 1242
91 Ga0207664_10033241 3300025929 Bacteria 3961
92 Ga0207690_10544287 3300025932 Bacteria 943
93 Ga0207686_11016170 3300025934 Bacteria 673
94 Ga0207669_10023221 3300025937 Bacteria 3309
95 Ga0207704_10078252 3300025938 Bacteria 2126
96 Ga0207665_10050205 3300025939 Bacteria 2805
97 Ga0207661_10114947 3300025944 Unclassified 2282
98 Ga0207667_10193214 3300025949 Unclassified 2088
99 Ga0207667_11004052 3300025949 Bacteria 822
100 Ga0207651_10018459 3300025960 Bacteria 4152
101 Ga0207640_10167476 3300025981 Unclassified 1633
102 Ga0207640_10753700 3300025981 Bacteria 840
103 Ga0207678_10252625 3300026067 Unclassified 1510
104 Ga0207702_10062050 3300026078 Bacteria 3190
105 Ga0207702_10145131 3300026078 Unclassified 2152
106 Ga0207702_10309576 3300026078 Bacteria 1501
107 Ga0207702_10556551 3300026078 Bacteria 1122
108 Ga0207674_10224386 3300026116 Bacteria 1827
109 Ga0207683_10021970 3300026121 Bacteria 5474
110 Ga0207698_10006649 3300026142 Bacteria 7225
111 Ga0207698_10017587 3300026142 Bacteria 4856
112 Ga0207698_10823900 3300026142 Unclassified 932
113 Ga0307515_10005560 3300028794 Bacteria 25507
114 Ga0307515_10241716 3300028794 Bacteria 1575
115 Ga0307516_10016805 3300031730 Bacteria 7641
116 Ga0307412_10405750 3300031911 Bacteria 1111
117 Ga0395900_0045138 3300037418 Bacteria 4539
118 Ga0395898_0253385 3300037466 Bacteria 1678
119 Ga0395905_0000476 3300037471 Bacteria 55356
120 Ga0395901_0304572 3300038443 Bacteria 1651
121 Ga0451793_0111209 3300041452 Bacteria 796
122 Ga0451795_1210882 3300041456 Bacteria 4172
123 Ga0451833_0602934 3300041491 Bacteria 1477
124 Ga0451845_0196404 3300041501 Bacteria 877
125 Ga0451843_0335877 3300041509 Bacteria 1193
126 Ga0466972_0016910 3300044658 Bacteria 3648
127 Ga0466982_0000001 3300044672 Bacteria 514662
128 Ga0466965_0130569 3300044683 Bacteria 1302
129 Ga0466966_0004690 3300044684 Bacteria 8996
130 Ga0466961_0334157 3300044693 Bacteria 923
131 Ga0466964_0007742 3300044706 Bacteria 4020
132 Ga0466971_0320693 3300044719 Bacteria 746
133 Ga0466970_0028592 3300044765 Bacteria 2930
134 Ga0466960_0053834 3300044901 Bacteria 1951
135 Ga0466959_0416040 3300045049 Bacteria 913
136 Ga0466958_0080900 3300045836 Bacteria 1999
137 Ga0495627_012869 3300046453 Bacteria 2954
138 Ga0495592_0540918 3300046454 Bacteria 718
139 Ga0495590_0062751 3300046457 Bacteria 1300
140 Ga0495650_0002970 3300046471 Bacteria 12840
141 Ga0495662_0079893 3300046476 Bacteria 1590
142 Ga0495583_0000991 3300046506 Bacteria 32505
143 Ga0495606_0002130 3300046507 Bacteria 23935
144 Ga0495620_0000833 3300046515 Bacteria 19059
145 Ga0495632_0296919 3300046519 Bacteria 717
146 Ga0495632_0354899 3300046519 Bacteria 644
147 Ga0495643_0066342 3300046522 Bacteria 1904
148 Ga0495648_0047694 3300046524 Bacteria 2645
149 Ga0495597_0130031 3300046542 Bacteria 1045
150 Ga0495622_0029276 3300046557 Bacteria 2573
151 Ga0495633_0049548 3300046558 Bacteria 1982
152 Ga0495611_0301951 3300046648 Bacteria 738
153 Ga0495625_0004457 3300046660 Bacteria 13235
154 Ga0495625_0004530 3300046660 Bacteria 13101
155 Ga0495649_0007591 3300046694 Bacteria 6593
156 Ga0495660_0203173 3300046810 Bacteria 945
157 Ga0495604_0041774 3300047317 Plasmid 3595
158 Ga0495687_000183 3300047443 Bacteria 91212
159 Ga0495673_0000182 3300047469 Bacteria 101303
160 Ga0495686_0063149 3300047472 Bacteria 2296
161 Ga0495686_0069238 3300047472 Bacteria 2176
162 Ga0495602_0197856 3300048088 Unclassified 1536
163 Ga0495626_0123201 3300048091 Bacteria 1112
164 Ga0496104_0384658 3300048907 Bacteria 1316
165 Ga0496108_0657023 3300048911 Bacteria 911
166 Ga0496112_0148171 3300048915 Bacteria 2315
167 Ga0496124_0012510 3300048927 Bacteria 8370
168 Ga0495678_092603 3300049459 Bacteria 1061
169 Ga0501033_0681323 3300049570 Bacteria 701
170 Ga0501034_0096548 3300049571 Bacteria 2951
171 Ga0501038_0000014 3300049574 Bacteria 164836
172 Ga0501040_0451961 3300049576 Bacteria 925
173 Ga0501042_0262920 3300049578 Bacteria 1246
174 Ga0501043_0769232 3300049579 Bacteria 699
175 Ga0501047_0660241 3300049581 Bacteria 865
176 Ga0501071_0260069 3300049587 Bacteria 1311
177 Ga0501080_0221559 3300049742 Bacteria 1731
178 Ga0501045_0324301 3300049824 Bacteria 1146
179 nmdc:mga04h51_55745_c1 3300050495 Bacteria 1339
180 nmdc:mga07m45_119057_c1 3300050496 Bacteria 1525
181 nmdc:mga05p37_198709_c1 3300050507 Bacteria 2430
182 nmdc:mga05p37_386042_c1 3300050507 Bacteria 1639
183 Ga0500578_0151001 3300053086 Bacteria 1447
184 Ga0500607_170478 3300053121 Bacteria 981
185 Ga0500577_0007162 3300053142 Bacteria 3114
186 Ga0500588_0002603 3300053146 Bacteria 3700
187 Ga0500590_006046 3300053148 Bacteria 5870
188 Ga0500616_0002576 3300053153 Bacteria 14921
189 Ga0500587_012901 3300053739 Bacteria 1053
190 Ga0466962_0000447 3300061719 Bacteria 17893
191 Ga0530510_0305688 3300061734 Bacteria 1190

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025254 Ga0209148_1000037 Ga0209148_100003776 169
2 3300025272 Ga0209455_1000036 Ga0209455_100003653 169
3 3300049570 Ga0501033_0681323 Ga0501033_0681323_57_662 169
4 3300049576 Ga0501040_0451961 Ga0501040_0451961_173_778 169
5 3300049578 Ga0501042_0262920 Ga0501042_0262920_23_628 169
6 3300049579 Ga0501043_0769232 Ga0501043_0769232_21_626 169
7 3300049587 Ga0501071_0260069 Ga0501071_0260069_450_1055 169
8 3300049742 Ga0501080_0221559 Ga0501080_0221559_1022_1627 169
9 3300049824 Ga0501045_0324301 Ga0501045_0324301_424_1029 169
10 3300061734 Ga0530510_0305688 Ga0530510_0305688_12_617 169
11 3300005435 Ga0070714_100010057 Ga0070714_1000100574 170
12 3300005437 Ga0070710_10001439 Ga0070710_100014392 170
13 3300005439 Ga0070711_100007633 Ga0070711_1000076333 170
14 3300025898 Ga0207692_10000620 Ga0207692_1000062010 170
15 3300025906 Ga0207699_10001377 Ga0207699_100013775 170
16 3300025916 Ga0207663_10045094 Ga0207663_100450944 170
17 3300025929 Ga0207664_10033241 Ga0207664_100332412 170
18 3300025939 Ga0207665_10050205 Ga0207665_100502052 170
19 3300025949 Ga0207667_11004052 Ga0207667_110040521 170
20 3300049574 Ga0501038_0000014 Ga0501038_0000014_7443_8039 172
21 3300050507 nmdc:mga05p37_386042_c1 nmdc:mga05p37_386042_c1_366_947 175
22 3300053153 Ga0500616_0002576 Ga0500616_0002576_4219_4809 175
23 3300005616 Ga0068852_100709866 Ga0068852_1007098662 177
24 3300026142 Ga0207698_10823900 Ga0207698_108239001 177
25 3300048907 Ga0496104_0384658 Ga0496104_0384658_287_868 178
26 3300048927 Ga0496124_0012510 Ga0496124_0012510_2402_2974 178
27 iso_pu_bacteria 2724679232 2725946979 181
28 3300006175 Ga0070712_100859285 Ga0070712_1008592852 182
29 3300025928 Ga0207700_10375729 Ga0207700_103757291 182
30 3300046519 Ga0495632_0354899 Ga0495632_0354899_85_633 182
31 3300046648 Ga0495611_0301951 Ga0495611_0301951_41_625 182
32 3300009148 Ga0105243_11194678 Ga0105243_111946781 183
33 3300003775 Ga0055524_1000319 Ga0055524_10003196 184
34 3300025299 Ga0209256_1000042 Ga0209256_100004277 184
35 3300045836 Ga0466958_0080900 Ga0466958_0080900_926_1543 187
36 iso_pu_bacteria 2582581308 2585281914 188
37 3300012512 Ga0157327_1009199 Ga0157327_10091992 189
38 iso_pu_bacteria 2599185352 2600194337 189
39 iso_pu_bacteria 2643221557 2643803539 189
40 iso_pu_bacteria 2643221618 2644109612 189
41 iso_pu_bacteria 2643221626 2644145296 189
42 iso_pu_bacteria 2643221655 2644311001 189
43 iso_pu_bacteria 2643221659 2644332654 189
44 iso_pu_bacteria 2643221668 2644375186 189
45 iso_pu_bacteria 2643221698 2644544399 189
46 iso_pu_bacteria 2643221712 2644613967 189
47 iso_pu_bacteria 2643221723 2644676134 189
48 iso_pu_bacteria 2941499720 2941499918 189
49 iso_pu_bacteria 2582581279 2585148126 190
50 iso_pu_bacteria 2643221583 2643926728 190
51 iso_pu_bacteria 8055431914 8055433221 190
52 3300014325 Ga0163163_10020929 Ga0163163_1002092910 191
53 3300037418 Ga0395900_0045138 Ga0395900_0045138_3260_3835 191
54 3300038443 Ga0395901_0304572 Ga0395901_0304572_272_847 191
55 3300044658 Ga0466972_0016910 Ga0466972_0016910_589_1197 191
56 3300044683 Ga0466965_0130569 Ga0466965_0130569_365_973 191
57 3300044693 Ga0466961_0334157 Ga0466961_0334157_277_885 191
58 3300044706 Ga0466964_0007742 Ga0466964_0007742_682_1290 191
59 3300044765 Ga0466970_0028592 Ga0466970_0028592_1982_2590 191
60 3300048911 Ga0496108_0657023 Ga0496108_0657023_250_825 191
61 3300003320 rootH2_10105336 rootH2_101053362 192
62 3300003323 rootH1_10093872 rootH1_100938722 192
63 3300005327 Ga0070658_10057501 Ga0070658_100575013 192
64 3300005328 Ga0070676_10507339 Ga0070676_105073391 192
65 3300005329 Ga0070683_100033432 Ga0070683_1000334322 192
66 3300005339 Ga0070660_100115735 Ga0070660_1001157354 192
67 3300005344 Ga0070661_100007612 Ga0070661_1000076127 192
68 3300005355 Ga0070671_100562863 Ga0070671_1005628631 192
69 3300005356 Ga0070674_100005589 Ga0070674_1000055896 192
70 3300005364 Ga0070673_100046369 Ga0070673_1000463693 192
71 3300005455 Ga0070663_100371798 Ga0070663_1003717982 192
72 3300005456 Ga0070678_100148168 Ga0070678_1001481682 192
73 3300005459 Ga0068867_100138507 Ga0068867_1001385072 192
74 3300005535 Ga0070684_100055490 Ga0070684_1000554903 192
75 3300005539 Ga0068853_100204509 Ga0068853_1002045093 192
76 3300005547 Ga0070693_100049965 Ga0070693_1000499653 192
77 3300005548 Ga0070665_100071032 Ga0070665_1000710322 192
78 3300005563 Ga0068855_100165053 Ga0068855_1001650534 192
79 3300005577 Ga0068857_100186900 Ga0068857_1001869004 192
80 3300005578 Ga0068854_100057842 Ga0068854_1000578422 192
81 3300005614 Ga0068856_100288976 Ga0068856_1002889762 192
82 3300005614 Ga0068856_100297365 Ga0068856_1002973652 192
83 3300005614 Ga0068856_100586335 Ga0068856_1005863352 192
84 3300005616 Ga0068852_100135022 Ga0068852_1001350224 192
85 3300005834 Ga0068851_10088281 Ga0068851_100882811 192
86 3300006178 Ga0075367_10044502 Ga0075367_100445024 192
87 3300006844 Ga0075428_100632367 Ga0075428_1006323672 192
88 3300006847 Ga0075431_100009577 Ga0075431_1000095778 192
89 3300006881 Ga0068865_100213803 Ga0068865_1002138032 192
90 3300009093 Ga0105240_10099909 Ga0105240_100999094 192
91 3300009174 Ga0105241_10112649 Ga0105241_101126493 192
92 3300009176 Ga0105242_11202439 Ga0105242_112024392 192
93 3300010375 Ga0105239_10060072 Ga0105239_100600722 192
94 3300013100 Ga0157373_10020518 Ga0157373_100205183 192
95 3300013105 Ga0157369_10177463 Ga0157369_101774632 192
96 3300013296 Ga0157374_10025174 Ga0157374_100251745 192
97 3300013307 Ga0157372_10070548 Ga0157372_100705483 192
98 3300013308 Ga0157375_11505300 Ga0157375_115053001 192
99 3300015262 Ga0182007_10128124 Ga0182007_101281241 192
100 3300025321 Ga0207656_10005678 Ga0207656_100056784 192
101 3300025907 Ga0207645_10511509 Ga0207645_105115091 192
102 3300025909 Ga0207705_10620954 Ga0207705_106209541 192
103 3300025911 Ga0207654_10005661 Ga0207654_100056612 192
104 3300025913 Ga0207695_10122708 Ga0207695_101227083 192
105 3300025932 Ga0207690_10544287 Ga0207690_105442871 192
106 3300025934 Ga0207686_11016170 Ga0207686_110161701 192
107 3300025937 Ga0207669_10023221 Ga0207669_100232216 192
108 3300025938 Ga0207704_10078252 Ga0207704_100782521 192
109 3300025944 Ga0207661_10114947 Ga0207661_101149472 192
110 3300025949 Ga0207667_10193214 Ga0207667_101932143 192
111 3300025960 Ga0207651_10018459 Ga0207651_100184595 192
112 3300025981 Ga0207640_10167476 Ga0207640_101674762 192
113 3300026067 Ga0207678_10252625 Ga0207678_102526252 192
114 3300026078 Ga0207702_10145131 Ga0207702_101451312 192
115 3300026078 Ga0207702_10309576 Ga0207702_103095761 192
116 3300026078 Ga0207702_10556551 Ga0207702_105565512 192
117 3300026116 Ga0207674_10224386 Ga0207674_102243862 192
118 3300026121 Ga0207683_10021970 Ga0207683_100219705 192
119 3300026142 Ga0207698_10006649 Ga0207698_100066498 192
120 3300028794 Ga0307515_10005560 Ga0307515_100055604 192
121 3300031730 Ga0307516_10016805 Ga0307516_100168053 192
122 3300031911 Ga0307412_10405750 Ga0307412_104057501 192
123 3300037471 Ga0395905_0000476 Ga0395905_0000476_41315_41926 192
124 3300041452 Ga0451793_0111209 Ga0451793_0111209_69_662 192
125 3300041456 Ga0451795_1210882 Ga0451795_1210882_175_768 192
126 3300041491 Ga0451833_0602934 Ga0451833_0602934_137_730 192
127 3300041501 Ga0451845_0196404 Ga0451845_0196404_204_797 192
128 3300041509 Ga0451843_0335877 Ga0451843_0335877_65_658 192
129 3300044672 Ga0466982_0000001 Ga0466982_0000001_7499_8116 192
130 3300044684 Ga0466966_0004690 Ga0466966_0004690_3032_3649 192
131 3300044719 Ga0466971_0320693 Ga0466971_0320693_103_720 192
132 3300044901 Ga0466960_0053834 Ga0466960_0053834_1085_1702 192
133 3300045049 Ga0466959_0416040 Ga0466959_0416040_208_897 192
134 3300046453 Ga0495627_012869 Ga0495627_012869_1046_1639 192
135 3300046471 Ga0495650_0002970 Ga0495650_0002970_8647_9321 192
136 3300046507 Ga0495606_0002130 Ga0495606_0002130_2849_3463 192
137 3300046519 Ga0495632_0296919 Ga0495632_0296919_30_623 192
138 3300046522 Ga0495643_0066342 Ga0495643_0066342_35_628 192
139 3300046558 Ga0495633_0049548 Ga0495633_0049548_1230_1829 192
140 3300046660 Ga0495625_0004530 Ga0495625_0004530_3837_4430 192
141 3300047469 Ga0495673_0000182 Ga0495673_0000182_63355_63954 192
142 3300047472 Ga0495686_0069238 Ga0495686_0069238_1375_1968 192
143 3300048915 Ga0496112_0148171 Ga0496112_0148171_453_1037 192
144 3300049581 Ga0501047_0660241 Ga0501047_0660241_14_652 192
145 3300050496 nmdc:mga07m45_119057_c1 nmdc:mga07m45_119057_c1_311_904 192
146 3300050507 nmdc:mga05p37_198709_c1 nmdc:mga05p37_198709_c1_1669_2250 192
147 3300053086 Ga0500578_0151001 Ga0500578_0151001_721_1320 192
148 3300053142 Ga0500577_0007162 Ga0500577_0007162_386_985 192
149 3300053146 Ga0500588_0002603 Ga0500588_0002603_2888_3487 192
150 3300053739 Ga0500587_012901 Ga0500587_012901_331_924 192
151 3300061719 Ga0466962_0000447 Ga0466962_0000447_6798_7415 192
152 iso_pu_bacteria 2585428062 2587755023 192
153 iso_pu_bacteria 2838016132 2838016671 192
154 iso_pu_bacteria 2838061910 2838064456 192
155 3300002987 JGI25159J45721_1000040 JGI25159J45721_100004080 193
156 3300003187 JGI25151J46595_10002301 JGI25151J46595_100023015 193
157 3300003323 rootH1_10056810 rootH1_100568103 193
158 3300003354 JGI25160J50197_1000128 JGI25160J50197_10001281 193
159 3300003374 JGI25161J50226_1007062 JGI25161J50226_10070621 193
160 3300003771 Ga0055526_1000675 Ga0055526_100067512 193
161 3300003775 Ga0055524_1024404 Ga0055524_10244042 193
162 3300003781 Ga0055536_1006591 Ga0055536_10065913 193
163 3300005262 Ga0065165_1000013 Ga0065165_1000013220 193
164 3300005578 Ga0068854_100484696 Ga0068854_1004846962 193
165 3300005616 Ga0068852_100106913 Ga0068852_1001069133 193
166 3300013249 Ga0171463_1003 Ga0171463_1003218 193
167 3300013307 Ga0157372_10237643 Ga0157372_102376432 193
168 3300013307 Ga0157372_10322891 Ga0157372_103228912 193
169 3300013307 Ga0157372_10429609 Ga0157372_104296093 193
170 3300015690 Ga0183363_1324 Ga0183363_13242 193
171 3300021320 Ga0214544_1000010 Ga0214544_1000010205 193
172 3300021321 Ga0214542_1000023 Ga0214542_100002346 193
173 3300021327 Ga0214543_1000019 Ga0214543_1000019121 193
174 3300025208 Ga0209436_100194 Ga0209436_1001942 193
175 3300025284 Ga0209130_1000034 Ga0209130_1000034214 193
176 3300025292 Ga0209676_1002535 Ga0209676_10025352 193
177 3300025294 Ga0209025_1000314 Ga0209025_100031475 193
178 3300025295 Ga0209564_1000013 Ga0209564_1000013212 193
179 3300025298 Ga0209050_1017079 Ga0209050_10170792 193
180 3300025299 Ga0209256_1005824 Ga0209256_10058248 193
181 3300025302 Ga0207426_1000006 Ga0207426_1000006587 193
182 3300025303 Ga0209051_1063631 Ga0209051_10636311 193
183 3300025304 Ga0209257_1002099 Ga0209257_10020999 193
184 3300025911 Ga0207654_10051611 Ga0207654_100516112 193
185 3300025981 Ga0207640_10753700 Ga0207640_107537001 193
186 3300026078 Ga0207702_10062050 Ga0207702_100620503 193
187 3300026142 Ga0207698_10017587 Ga0207698_100175872 193
188 3300028794 Ga0307515_10241716 Ga0307515_102417162 193
189 3300037466 Ga0395898_0253385 Ga0395898_0253385_805_1386 193
190 3300046454 Ga0495592_0540918 Ga0495592_0540918_42_644 193
191 3300046457 Ga0495590_0062751 Ga0495590_0062751_539_1135 193
192 3300046476 Ga0495662_0079893 Ga0495662_0079893_366_968 193
193 3300046506 Ga0495583_0000991 Ga0495583_0000991_25295_25891 193
194 3300046515 Ga0495620_0000833 Ga0495620_0000833_18047_18643 193
195 3300046524 Ga0495648_0047694 Ga0495648_0047694_131_727 193
196 3300046542 Ga0495597_0130031 Ga0495597_0130031_170_766 193
197 3300046557 Ga0495622_0029276 Ga0495622_0029276_457_1059 193
198 3300046660 Ga0495625_0004457 Ga0495625_0004457_12114_12710 193
199 3300046694 Ga0495649_0007591 Ga0495649_0007591_1871_2467 193
200 3300046810 Ga0495660_0203173 Ga0495660_0203173_274_870 193
201 3300047317 Ga0495604_0041774 Ga0495604_0041774_1982_2584 193
202 3300047443 Ga0495687_000183 Ga0495687_000183_19386_19982 193
203 3300047472 Ga0495686_0063149 Ga0495686_0063149_1674_2270 193
204 3300048088 Ga0495602_0197856 Ga0495602_0197856_861_1463 193
205 3300048091 Ga0495626_0123201 Ga0495626_0123201_496_1092 193
206 3300049459 Ga0495678_092603 Ga0495678_092603_351_947 193
207 3300049571 Ga0501034_0096548 Ga0501034_0096548_412_1011 193
208 3300050495 nmdc:mga04h51_55745_c1 nmdc:mga04h51_55745_c1_278_874 193
209 3300053121 Ga0500607_170478 Ga0500607_170478_263_865 193
210 3300053148 Ga0500590_006046 Ga0500590_006046_2318_2920 193
211 iso_pu_bacteria 2643221610 2644067506 193
212 iso_pu_bacteria 2643221675 2644418559 193
213 iso_pu_bacteria 2643221680 2644451926 193
214 iso_pu_bacteria 2643221726 2644690688 193
215 iso_pu_bacteria 2838016132 2838016744 193
216 iso_pu_bacteria 2913295892 2913301702 193

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01545

Cation_efflux

Cation efflux family

36

214

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8f6h-assembly1.cif.gz_B cryo-em structure of a zinc-loaded asymmetrical tmd d70a mutant of the yiip-fab complex 0.802 1 187
8j80-assembly1.cif.gz_B cryo-em structure of hznt7-fab complex in zinc state 1, determined in heterogeneous conformations- one subunit in an inward-facing zinc-bound and the other in an outward-facing zinc-unbound conformation 0.7698 5 185
8f6h-assembly1.cif.gz_B cryo-em structure of a zinc-loaded asymmetrical tmd d70a mutant of the yiip-fab complex 0.7694 1 187
5vrf-assembly1.cif.gz_A cryoem structure of the zinc transporter yiip from helical crystals 0.7475 1 185
8j80-assembly1.cif.gz_B cryo-em structure of hznt7-fab complex in zinc state 1, determined in heterogeneous conformations- one subunit in an inward-facing zinc-bound and the other in an outward-facing zinc-unbound conformation 0.7248 5 185
ID Description Score Start End Superfamily
af_P96876_30_219_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8669 4 184 1.20.1510.10
af_P75757_17_213_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8501 6 188 1.20.1510.10
af_P96876_30_219_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8255 4 184 1.20.1510.10
af_Q9SI03_23_218_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8127 6 187 1.20.1510.10
af_Q9BRI3_88_228_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8073 83 185 1.20.1510.10
ID Description Score Start End GO Terms
AF-K5Z2C6-F1-model_v4 Transporter 0.9901 2 190 GO:0008324
GO:0016020
AF-A0A1E4M8W7-F1-model_v4 Cobalt transporter 0.9831 2 191 GO:0005886
GO:0006882
GO:0015086
GO:0015093
GO:0015341
AF-A0A512IUB4-F1-model_v4 Cobalt transporter 0.9771 5 192 GO:0008324
GO:0016020
AF-A0A6J6TA08-F1-model_v4 Unannotated protein 0.9748 1 184 GO:0008324
GO:0016020
AF-A0A6I7R6P6-F1-model_v4 deleted 0.9721 6 185

Feature Viewer

pLDDT pTM Quality
84.95 0.8 High
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Predicted Structure (AlphaFold2)

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