F327826

General Info

Members Datasets Scaffolds Average Seq Length
216 109 432 291

Family's Representative Sequence

Representative Sequence 3300038726|Ga0400490_34781|Ga0400490_34781_36_1049
Length 337
Sequence MGPATPLSFTWGETEYRVAWMPFGGYVKMASKEEQEVMKRHTIKLSFSDRIFHLVNYIYLTIVFFVVLFPLINIVSQSLSSPGAVIAGKVFLWPVNFTLAAYKRIITNPDLIRGFLNSLFYTGFGTLLNVLLSIMAAYPLSRKDFYGWKIFIGLFVFTMLFRGGLIPSYMVVRALKLYNTRWAMILPSALSVWNVMLARTFFQNTIPTELYDAAEIDGASDFQVLVRVVLPLAAPIIAVLTLFYAVGHWNSFFHGLIYLRSKALLPLQVVLRNILANAEEIEAMVDVTLTANDAQVLALVEVLKYAIIVFASLPVLILYPFIQKYFVKGIMVGSLKG

Samples

Sample ID Description Type Environment
1 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
2 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
3 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
4 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
5 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
6 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
7 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
8 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
9 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
10 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
12 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
13 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
14 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
15 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
16 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
17 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
18 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
19 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
20 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
21 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
22 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
23 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
24 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
25 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
26 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
27 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
28 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
29 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
30 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
31 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
32 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
33 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
34 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
35 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
36 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
37 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
38 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
39 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
40 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
41 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
42 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
43 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
44 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
45 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
46 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
47 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
48 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
49 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
50 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
51 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
53 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
55 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
60 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
61 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
62 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
63 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
64 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
65 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
67 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
68 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
69 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
70 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
71 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
72 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
73 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
74 2738543010 Bacillus sp. YR335 Isolate Unclassified
75 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
76 2818991459 Paenibacillus sp. 597 Isolate Unclassified
77 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
78 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
79 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
80 2857472729 Cohnella sp. R-74144 Isolate Unclassified
81 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
82 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
83 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
84 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
85 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
86 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
87 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
88 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
89 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
90 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
91 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
92 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
93 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
94 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
95 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
96 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
97 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
98 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
99 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
100 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
101 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
102 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
103 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
104 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
105 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
106 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
107 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
108 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
109 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 50
Metatranscriptomes 1.85
Isolates 48.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.7
Nodule 2.78
Rhizoplane 1.39
Rhizosphere 41.2
Stem 0
Stem Tuber 0
Unclassified 1.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400490_34781 3300038726 Bacteria 1163
2 Ga0055538_1000214 3300003751 Bacteria 33699
3 Ga0055538_1000268 3300003751 Bacteria 27344
4 Ga0055541_1012173 3300003841 Bacteria 1239
5 Ga0105251_10094786 3300009011 Bacteria 1368
6 Ga0105244_10007509 3300009036 Bacteria 6923
7 Ga0209784_100115 3300025224 Bacteria 88923
8 Ga0209566_100139 3300025225 Bacteria 89273
9 Ga0209566_100176 3300025225 Bacteria 69585
10 Ga0209675_1005845 3300025291 Bacteria 5053
11 Ga0209025_1016409 3300025294 Bacteria 4372
12 Ga0207655_1046610 3300025728 Bacteria 1798
13 Ga0265318_10030746 3300028577 Bacteria 2087
14 Ga0265322_10000961 3300028654 Bacteria 9980
15 Ga0265338_10010007 3300028800 Bacteria 11210
16 Ga0265328_10074631 3300031239 Bacteria 1248
17 Ga0265320_10028786 3300031240 Bacteria 2881
18 Ga0265340_10106949 3300031247 Bacteria 1296
19 Ga0265316_10001883 3300031344 Bacteria 22035
20 Ga0265316_10006544 3300031344 Bacteria 11111
21 Ga0265342_10000602 3300031712 Bacteria 38030
22 Ga0316582_0028613 3300036647 Bacteria 3378
23 Ga0395899_0002127 3300037312 Bacteria 16275
24 Ga0395899_0118704 3300037312 Bacteria 1896
25 Ga0395899_0260332 3300037312 Bacteria 1187
26 Ga0400483_013568 3300039062 Bacteria 3863
27 Ga0400483_120354 3300039062 Bacteria 1672
28 Ga0400483_189978 3300039062 Bacteria 1780
29 Ga0400483_240200 3300039062 Bacteria 2054
30 Ga0451793_0614051 3300041452 Bacteria 4374
31 Ga0439449_0012770 3300042007 Bacteria 3158
32 Ga0453683_0252516 3300044673 Unclassified 1124
33 Ga0466965_0035560 3300044683 Bacteria 2440
34 Ga0453684_0263564 3300044712 Bacteria 1973
35 Ga0453684_0299577 3300044712 Bacteria 1828
36 Ga0453684_0621599 3300044712 Bacteria 1182
37 Ga0466970_0099098 3300044765 Bacteria 1586
38 Ga0466960_0042232 3300044901 Bacteria 2164
39 Ga0466967_0325620 3300045976 Bacteria 1483
40 Ga0495637_0084716 3300046520 Bacteria 1259
41 Ga0495660_0009666 3300046810 Bacteria 5620
42 Ga0495660_0039521 3300046810 Bacteria 2620
43 Ga0496112_0061731 3300048915 Bacteria 3696
44 Ga0496114_0054322 3300048917 Bacteria 3340
45 Ga0496116_0000766 3300048919 Bacteria 40850
46 Ga0496116_0013583 3300048919 Bacteria 6550
47 Ga0496116_0045602 3300048919 Bacteria 2966
48 Ga0496116_0058707 3300048919 Unclassified 2506
49 Ga0496116_0119643 3300048919 Bacteria 1527
50 Ga0496116_0151680 3300048919 Bacteria 1286
51 Ga0496116_0152350 3300048919 Bacteria 1282
52 Ga0496117_0000150 3300048920 Bacteria 148465
53 Ga0496117_0065349 3300048920 Bacteria 2474
54 Ga0496118_0020678 3300048921 Bacteria 5828
55 Ga0496118_0029028 3300048921 Bacteria 4646
56 Ga0496119_0000088 3300048922 Bacteria 135581
57 Ga0496119_0004952 3300048922 Bacteria 13017
58 Ga0496119_0082380 3300048922 Bacteria 1850
59 Ga0496120_0000006 3300048923 Bacteria 445068
60 Ga0496120_0001003 3300048923 Bacteria 38112
61 Ga0496120_0006795 3300048923 Bacteria 8672
62 Ga0496120_0049389 3300048923 Bacteria 2415
63 Ga0496122_0000008 3300048925 Bacteria 596403
64 Ga0496122_0000035 3300048925 Bacteria 318098
65 Ga0496122_0000040 3300048925 Bacteria 285095
66 Ga0496122_0002120 3300048925 Bacteria 29206
67 Ga0496122_0003437 3300048925 Bacteria 20828
68 Ga0496122_0010328 3300048925 Bacteria 9654
69 Ga0496122_0012020 3300048925 Bacteria 8679
70 Ga0496122_0052467 3300048925 Bacteria 3086
71 Ga0496122_0099592 3300048925 Bacteria 1948
72 Ga0496122_0102917 3300048925 Bacteria 1902
73 Ga0496122_0115213 3300048925 Unclassified 1752
74 Ga0496123_0000640 3300048926 Bacteria 58520
75 Ga0496123_0003253 3300048926 Bacteria 18456
76 Ga0496123_0084879 3300048926 Bacteria 1907
77 Ga0496123_0095375 3300048926 Bacteria 1750
78 Ga0496124_0232904 3300048927 Bacteria 1376
79 Ga0496125_0000010 3300048928 Bacteria 671167
80 Ga0496125_0037760 3300048928 Bacteria 4195
81 Ga0496126_0000021 3300048929 Bacteria 472971
82 Ga0496126_0000205 3300048929 Bacteria 132210
83 Ga0496126_0000210 3300048929 Bacteria 131214
84 Ga0496126_0002294 3300048929 Bacteria 26361
85 Ga0496126_0114147 3300048929 Bacteria 2350
86 Ga0501305_000089 3300049161 Bacteria 5360
87 Ga0501305_005165 3300049161 Bacteria 1569
88 Ga0501312_000114 3300049528 Bacteria 4870
89 Ga0501312_001004 3300049528 Bacteria 2607
90 Ga0501031_0000630 3300049568 Bacteria 20819
91 Ga0501032_0012168 3300049569 Bacteria 6159
92 Ga0501033_0001443 3300049570 Bacteria 21110
93 Ga0501034_0001917 3300049571 Bacteria 26326
94 Ga0501034_0460323 3300049571 Bacteria 1189
95 Ga0501036_0001497 3300049572 Bacteria 18015
96 Ga0501037_0000321 3300049573 Bacteria 40768
97 Ga0501038_0000385 3300049574 Bacteria 38073
98 Ga0501039_0000607 3300049575 Bacteria 25870
99 Ga0501042_0164860 3300049578 Bacteria 1599
100 Ga0501043_0006634 3300049579 Bacteria 9260
101 Ga0501046_0000142 3300049580 Bacteria 74959
102 Ga0501047_0005332 3300049581 Bacteria 12085
103 Ga0501048_0000559 3300049582 Bacteria 26327
104 Ga0501067_0006313 3300049583 Bacteria 6572
105 Ga0501069_0000527 3300049585 Bacteria 17501
106 Ga0501070_0000147 3300049586 Bacteria 64876
107 Ga0501073_0003762 3300049589 Bacteria 11402
108 Ga0501074_0011179 3300049590 Bacteria 6520
109 Ga0501080_0000276 3300049742 Bacteria 38670
110 Ga0501035_0008245 3300049822 Bacteria 9707
111 Ga0501044_0008559 3300049823 Bacteria 11212
112 Ga0501084_0009251 3300054114 Bacteria 8151
113 2515851190 2515154155 Bacteria 7985436
114 2563927828 2563366752 Bacteria 4961801
115 2563928834 2563366752 Bacteria 4961801
116 2595317341 2593339198 Bacteria 7267884
117 2595317718 2593339198 Bacteria 7267884
118 2595318278 2593339198 Bacteria 7267884
119 2595320448 2593339198 Bacteria 7267884
120 2595320535 2593339198 Bacteria 7267884
121 2643735884 2643221543 Bacteria 6628015
122 2643737289 2643221543 Bacteria 6628015
123 2644426080 2643221676 Bacteria 8119172
124 2676476562 2675903058 Bacteria 6822861
125 2676478956 2675903058 Bacteria 6822861
126 2739233301 2738543010 Bacteria 5583595
127 2802439551 2802428803 Bacteria 5806948
128 2819668698 2818991459 Bacteria 8736032
129 2819669797 2818991459 Bacteria 8736032
130 2819673485 2818991459 Bacteria 8736032
131 2819674004 2818991459 Bacteria 8736032
132 2821115473 2821111986 Bacteria 6894338
133 2827630271 2827628540 Bacteria 6858585
134 2827630713 2827628540 Bacteria 6858585
135 2857453445 2857453340 Bacteria 8090534
136 2857453594 2857453340 Bacteria 8090534
137 2857454253 2857453340 Bacteria 8090534
138 2857454464 2857453340 Bacteria 8090534
139 2857454835 2857453340 Bacteria 8090534
140 2857456450 2857453340 Bacteria 8090534
141 2857457794 2857453340 Bacteria 8090534
142 2857457820 2857453340 Bacteria 8090534
143 2857478384 2857472729 Bacteria 6568124
144 2865005443 2865002811 Bacteria 6333767
145 2883824085 2883821847 Bacteria 5121194
146 2885530995 2885526491 Bacteria 7164189
147 2887480405 2887478801 Bacteria 8972725
148 2888581870 2888578766 Bacteria 6743310
149 2888584026 2888578766 Bacteria 6743310
150 2889043541 2889042446 Bacteria 7618936
151 2904114304 2904113452 Bacteria 7796941
152 2904116046 2904113452 Bacteria 7796941
153 2904116838 2904113452 Bacteria 7796941
154 2904117409 2904113452 Bacteria 7796941
155 2904495266 2904490793 Bacteria 7046938
156 2904757672 2904755435 Bacteria 7986759
157 2907203705 2907202186 Bacteria 6632024
158 2919163538 2919160200 Bacteria 6929020
159 2919426289 2919425241 Bacteria 8055701
160 2919426465 2919425241 Bacteria 8055701
161 2919426718 2919425241 Bacteria 8055701
162 2919426929 2919425241 Bacteria 8055701
163 2919427784 2919425241 Bacteria 8055701
164 2919427866 2919425241 Bacteria 8055701
165 2925330722 2925326138 Bacteria 9652120
166 2925333456 2925326138 Bacteria 9652120
167 2931387002 2931384279 Bacteria 7299545
168 2938655021 2938649242 Bacteria 7118381
169 2945994399 2945991243 Bacteria 7008369
170 2946057197 2946053406 Bacteria 6978655
171 2971413080 2971410472 Bacteria 8311090
172 2971414336 2971410472 Bacteria 8311090
173 2971414557 2971410472 Bacteria 8311090
174 2971415214 2971410472 Bacteria 8311090
175 2971415594 2971410472 Bacteria 8311090
176 2971416035 2971410472 Bacteria 8311090
177 2980182938 2980182181 Bacteria 9454109
178 2980183026 2980182181 Bacteria 9454109
179 2980183102 2980182181 Bacteria 9454109
180 2980186027 2980182181 Bacteria 9454109
181 2980186516 2980182181 Bacteria 9454109
182 2980186967 2980182181 Bacteria 9454109
183 2980187180 2980182181 Bacteria 9454109
184 2980187291 2980182181 Bacteria 9454109
185 2980187419 2980182181 Bacteria 9454109
186 2980187709 2980182181 Bacteria 9454109
187 2980187786 2980182181 Bacteria 9454109
188 2980188192 2980182181 Bacteria 9454109
189 2980188595 2980182181 Bacteria 9454109
190 2980189118 2980182181 Bacteria 9454109
191 2980189595 2980182181 Bacteria 9454109
192 2980189636 2980182181 Bacteria 9454109
193 2980190081 2980182181 Bacteria 9454109
194 2980190176 2980182181 Bacteria 9454109
195 2988231489 2988225383 Bacteria 7221625
196 3001272387 3001272096 Bacteria 4729684
197 3006982700 3006978542 Bacteria 5328100
198 8002319298 8002317523 Bacteria 8051857
199 8046993560 8046991243 Bacteria 8497463
200 8046994303 8046991243 Bacteria 8497463
201 8046995556 8046991243 Bacteria 8497463
202 8046996386 8046991243 Bacteria 8497463
203 8054795438 8054795415 Bacteria 9785225
204 8054795552 8054795415 Bacteria 9785225
205 8054796778 8054795415 Bacteria 9785225
206 8054797052 8054795415 Bacteria 9785225
207 8054802507 8054795415 Bacteria 9785225
208 8054802767 8054795415 Bacteria 9785225
209 8055634500 8055632911 Bacteria 5283357
210 8056533778 8056533031 Bacteria 8964429
211 8056534146 8056533031 Bacteria 8964429
212 8056538469 8056533031 Bacteria 8964429
213 8056540502 8056533031 Bacteria 8964429
214 8056540731 8056533031 Bacteria 8964429
215 8057475043 8057473075 Bacteria 5892720
216 8057733688 8057733483 Bacteria 6578323
217 Ga0400490_34781
218 Ga0055538_1000214
219 Ga0055538_1000268
220 Ga0055541_1012173
221 Ga0105251_10094786
222 Ga0105244_10007509
223 Ga0209784_100115
224 Ga0209566_100139
225 Ga0209566_100176
226 Ga0209675_1005845
227 Ga0209025_1016409
228 Ga0207655_1046610
229 Ga0265318_10030746
230 Ga0265322_10000961
231 Ga0265338_10010007
232 Ga0265328_10074631
233 Ga0265320_10028786
234 Ga0265340_10106949
235 Ga0265316_10001883
236 Ga0265316_10006544
237 Ga0265342_10000602
238 Ga0316582_0028613
239 Ga0395899_0002127
240 Ga0395899_0118704
241 Ga0395899_0260332
242 Ga0400483_013568
243 Ga0400483_120354
244 Ga0400483_189978
245 Ga0400483_240200
246 Ga0451793_0614051
247 Ga0439449_0012770
248 Ga0453683_0252516
249 Ga0466965_0035560
250 Ga0453684_0263564
251 Ga0453684_0299577
252 Ga0453684_0621599
253 Ga0466970_0099098
254 Ga0466960_0042232
255 Ga0466967_0325620
256 Ga0495637_0084716
257 Ga0495660_0009666
258 Ga0495660_0039521
259 Ga0496112_0061731
260 Ga0496114_0054322
261 Ga0496116_0000766
262 Ga0496116_0013583
263 Ga0496116_0045602
264 Ga0496116_0058707
265 Ga0496116_0119643
266 Ga0496116_0151680
267 Ga0496116_0152350
268 Ga0496117_0000150
269 Ga0496117_0065349
270 Ga0496118_0020678
271 Ga0496118_0029028
272 Ga0496119_0000088
273 Ga0496119_0004952
274 Ga0496119_0082380
275 Ga0496120_0000006
276 Ga0496120_0001003
277 Ga0496120_0006795
278 Ga0496120_0049389
279 Ga0496122_0000008
280 Ga0496122_0000035
281 Ga0496122_0000040
282 Ga0496122_0002120
283 Ga0496122_0003437
284 Ga0496122_0010328
285 Ga0496122_0012020
286 Ga0496122_0052467
287 Ga0496122_0099592
288 Ga0496122_0102917
289 Ga0496122_0115213
290 Ga0496123_0000640
291 Ga0496123_0003253
292 Ga0496123_0084879
293 Ga0496123_0095375
294 Ga0496124_0232904
295 Ga0496125_0000010
296 Ga0496125_0037760
297 Ga0496126_0000021
298 Ga0496126_0000205
299 Ga0496126_0000210
300 Ga0496126_0002294
301 Ga0496126_0114147
302 Ga0501305_000089
303 Ga0501305_005165
304 Ga0501312_000114
305 Ga0501312_001004
306 Ga0501031_0000630
307 Ga0501032_0012168
308 Ga0501033_0001443
309 Ga0501034_0001917
310 Ga0501034_0460323
311 Ga0501036_0001497
312 Ga0501037_0000321
313 Ga0501038_0000385
314 Ga0501039_0000607
315 Ga0501042_0164860
316 Ga0501043_0006634
317 Ga0501046_0000142
318 Ga0501047_0005332
319 Ga0501048_0000559
320 Ga0501067_0006313
321 Ga0501069_0000527
322 Ga0501070_0000147
323 Ga0501073_0003762
324 Ga0501074_0011179
325 Ga0501080_0000276
326 Ga0501035_0008245
327 Ga0501044_0008559
328 Ga0501084_0009251
329 2515851190
330 2563927828
331 2563928834
332 2595317341
333 2595317718
334 2595318278
335 2595320448
336 2595320535
337 2643735884
338 2643737289
339 2644426080
340 2676476562
341 2676478956
342 2739233301
343 2802439551
344 2819668698
345 2819669797
346 2819673485
347 2819674004
348 2821115473
349 2827630271
350 2827630713
351 2857453445
352 2857453594
353 2857454253
354 2857454464
355 2857454835
356 2857456450
357 2857457794
358 2857457820
359 2857478384
360 2865005443
361 2883824085
362 2885530995
363 2887480405
364 2888581870
365 2888584026
366 2889043541
367 2904114304
368 2904116046
369 2904116838
370 2904117409
371 2904495266
372 2904757672
373 2907203705
374 2919163538
375 2919426289
376 2919426465
377 2919426718
378 2919426929
379 2919427784
380 2919427866
381 2925330722
382 2925333456
383 2931387002
384 2938655021
385 2945994399
386 2946057197
387 2971413080
388 2971414336
389 2971414557
390 2971415214
391 2971415594
392 2971416035
393 2980182938
394 2980183026
395 2980183102
396 2980186027
397 2980186516
398 2980186967
399 2980187180
400 2980187291
401 2980187419
402 2980187709
403 2980187786
404 2980188192
405 2980188595
406 2980189118
407 2980189595
408 2980189636
409 2980190081
410 2980190176
411 2988231489
412 3001272387
413 3006982700
414 8002319298
415 8046993560
416 8046994303
417 8046995556
418 8046996386
419 8054795438
420 8054795552
421 8054796778
422 8054797052
423 8054802507
424 8054802767
425 8055634500
426 8056533778
427 8056534146
428 8056538469
429 8056540502
430 8056540731
431 8057475043
432 8057733688

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

43

332

0.71

PF02163

Peptidase_M50

Peptidase family M50

1

323

0.64

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tqu-assembly1.cif.gz_N crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.6632 6 266
4tqu-assembly1.cif.gz_N crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.6305 6 266
3fh6-assembly2.cif.gz_I crystal structure of the resting state maltose transporter from e. coli 0.5961 6 266
4jbw-assembly2.cif.gz_I crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.5803 7 264
2r6g-assembly1.cif.gz_G the crystal structure of the e. coli maltose transporter 0.5802 6 263
ID Description Score Start End Superfamily
af_Q2FYQ6_61_267_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.6852 68 265 1.10.3720.10
af_P0AFA9_62_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.6768 57 264 1.10.3720.10
af_L7N652_1_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.6744 8 266 1.10.3720.10
af_Q2FZR6_145_349_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.6655 68 260 1.10.3720.10
af_P0AF01_2_224_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.6637 68 262 1.10.3720.10
ID Description Score Start End GO Terms
AF-K1U093-F1-model_v4 Binding-protein-dependent transport system inner membrane component 0.9367 68 213 GO:0005886
GO:0055085
AF-K1U093-F1-model_v4 Binding-protein-dependent transport system inner membrane component 0.9129 68 213 GO:0005886
GO:0055085
AF-W3Y2N6-F1-model_v4 deleted 0.9098 75 225
AF-A0A6B1FWS3-F1-model_v4 Carbohydrate ABC transporter permease 0.8329 68 276 GO:0005886
GO:0055085
AF-A0A7X9C8Q6-F1-model_v4 Carbohydrate ABC transporter permease 0.8223 68 276 GO:0005886
GO:0055085

Map