F327686

General Info

Members Datasets Scaffolds Average Seq Length
216 175 212 352

Family's Representative Sequence

Representative Sequence 3300026067|Ga0207678_10134760|Ga0207678_101347602
Length 390
Sequence MSNYPIRRLAIALQGGGSHGAFTWGVLDRLLQEPGFEIVGISGTSAGAMNAGILADGLRRGGAAEARKALAQYWEDVGRVPGYASLAFPAMPGAPPTWNLERNPVFLLQEMFTSIWSPYETNLLNYNPLRSLLARIDFDGLRQDLRAPRVFICATNVRTGLRRIFENQELSADVLLASAALRQTYQAVEIDGEHYWDGGYTGNPALAPLYLSTQASDLIVVGINPIVRSEVPRTARAITDRIGEISYNSTFMGEVAAIAFFEELMQSRPADRRFRRLFVHGIGDDALATFGASSKMNNHPDFLAHLREIGTRAADRWLADNRKAVGKRSTVDLSGLVPTRHGSLIGPSNHRGVAALREDGGRGSPRATRPPPRLPAERGAVVAVRRAARA

Samples

Sample ID Description Type Environment
1 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
2 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
3 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
4 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
59 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
60 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
100 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
103 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
107 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
108 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
109 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
110 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
111 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
112 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
116 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
117 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
123 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
128 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
129 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
133 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
163 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
171 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
172 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
173 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.3
Metatranscriptomes 1.85
Isolates 1.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.02
Nodule 0
Rhizoplane 6.02
Rhizosphere 86.57
Stem 0
Stem Tuber 0
Unclassified 1.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25404J52841_10000004 3300003659 Bacteria 17943
2 Ga0070690_100114758 3300005330 Bacteria 1801
3 Ga0070666_10124824 3300005335 Bacteria 1786
4 Ga0070666_10206335 3300005335 Bacteria 1383
5 Ga0070660_100002569 3300005339 Bacteria 12450
6 Ga0070689_100175702 3300005340 Bacteria 1737
7 Ga0070687_100022431 3300005343 Bacteria 2985
8 Ga0070661_100031021 3300005344 Bacteria 3864
9 Ga0070668_100052500 3300005347 Bacteria 3142
10 Ga0070669_100111605 3300005353 Bacteria 2075
11 Ga0070671_100097817 3300005355 Bacteria 2461
12 Ga0070671_100131391 3300005355 Bacteria 2109
13 Ga0070673_100057174 3300005364 Bacteria 3081
14 Ga0070673_100224354 3300005364 Bacteria 1628
15 Ga0070688_100090093 3300005365 Bacteria 2002
16 Ga0070659_100297194 3300005366 Bacteria 1346
17 Ga0070667_100130852 3300005367 Bacteria 2190
18 Ga0070709_10106357 3300005434 Bacteria 1878
19 Ga0070713_100000414 3300005436 Bacteria 27276
20 Ga0070713_100128691 3300005436 Bacteria 2230
21 Ga0070678_100142298 3300005456 Bacteria 1921
22 Ga0070678_100280860 3300005456 Bacteria 1408
23 Ga0070662_100001413 3300005457 Bacteria 14815
24 Ga0070662_100038716 3300005457 Bacteria 3387
25 Ga0070662_100238148 3300005457 Bacteria 1458
26 Ga0070685_10104311 3300005466 Bacteria 1736
27 Ga0068853_100092863 3300005539 Bacteria 2656
28 Ga0068853_100138496 3300005539 Bacteria 2183
29 Ga0070672_100001344 3300005543 Bacteria 15162
30 Ga0070665_100027676 3300005548 Bacteria 5709
31 Ga0068855_100015734 3300005563 Bacteria 9101
32 Ga0070664_100002975 3300005564 Bacteria 13708
33 Ga0068856_100034239 3300005614 Bacteria 4976
34 Ga0068864_100149900 3300005618 Bacteria 2112
35 Ga0068862_100300136 3300005844 Bacteria 1477
36 Ga0081455_10000238 3300005937 Bacteria 71282
37 Ga0081538_10011945 3300005981 Bacteria 7003
38 Ga0081538_10025801 3300005981 Bacteria 4132
39 Ga0075362_10000865 3300006177 Bacteria 9145
40 Ga0075362_10095494 3300006177 Bacteria 1384
41 Ga0075369_10000105 3300006186 Bacteria 22481
42 Ga0075369_10006192 3300006186 Bacteria 4517
43 Ga0075366_10036961 3300006195 Bacteria 2880
44 Ga0075370_10064965 3300006353 Bacteria 2082
45 Ga0068871_100105048 3300006358 Bacteria 2369
46 Ga0075428_100265375 3300006844 Bacteria 1848
47 Ga0075434_100107546 3300006871 Bacteria 2800
48 Ga0075434_100510222 3300006871 Bacteria 1223
49 Ga0075429_100087468 3300006880 Bacteria 2715
50 Ga0068865_100017283 3300006881 Bacteria 4636
51 Ga0075436_100005365 3300006914 Bacteria 8824
52 Ga0099794_10017341 3300007265 Bacteria 3207
53 Ga0105240_10187934 3300009093 Bacteria 2431
54 Ga0105240_10207828 3300009093 Bacteria 2289
55 Ga0111539_10305726 3300009094 Bacteria 1851
56 Ga0111539_10407016 3300009094 Bacteria 1584
57 Ga0105237_10042781 3300009545 Bacteria 4566
58 Ga0105238_10012473 3300009551 Bacteria 8571
59 Ga0105238_10117699 3300009551 Bacteria 2637
60 Ga0157373_10002610 3300013100 Bacteria 13685
61 Ga0157371_10003811 3300013102 Bacteria 13482
62 Ga0157370_10112771 3300013104 Bacteria 2541
63 Ga0157378_10000360 3300013297 Bacteria 44835
64 Ga0157378_10259037 3300013297 Bacteria 1668
65 Ga0163162_10026791 3300013306 Bacteria 5700
66 Ga0163162_10053194 3300013306 Bacteria 4069
67 Ga0163162_10194563 3300013306 Bacteria 2156
68 Ga0157372_10039485 3300013307 Bacteria 5210
69 Ga0157375_10023123 3300013308 Bacteria 5730
70 Ga0157375_10148998 3300013308 Bacteria 2473
71 Ga0157375_10150889 3300013308 Bacteria 2459
72 Ga0157375_10208031 3300013308 Bacteria 2113
73 Ga0163163_10449808 3300014325 Bacteria 1348
74 Ga0182008_10051654 3300014497 Bacteria 2039
75 Ga0157379_10483787 3300014968 Bacteria 1146
76 Ga0182006_1039008 3300015261 Bacteria 1876
77 Ga0182007_10036068 3300015262 Bacteria 1665
78 Ga0183362_10001 3300015683 Bacteria 2046624
79 Ga0163161_10010125 3300017792 Bacteria 6525
80 Ga0163161_10045424 3300017792 Bacteria 3168
81 Ga0207697_10020067 3300025315 Bacteria 2738
82 Ga0207688_10038389 3300025901 Bacteria 2657
83 Ga0207688_10207157 3300025901 Bacteria 1177
84 Ga0207645_10016487 3300025907 Bacteria 4890
85 Ga0207643_10138785 3300025908 Bacteria 1451
86 Ga0207662_10035101 3300025918 Bacteria 2928
87 Ga0207657_10003958 3300025919 Bacteria 15725
88 Ga0207649_10046215 3300025920 Bacteria 2673
89 Ga0207681_10228077 3300025923 Bacteria 1444
90 Ga0207694_10052036 3300025924 Bacteria 3175
91 Ga0207700_10001649 3300025928 Bacteria 12686
92 Ga0207644_10105919 3300025931 Bacteria 2119
93 Ga0207690_10001976 3300025932 Bacteria 12558
94 Ga0207706_10003196 3300025933 Bacteria 15724
95 Ga0207706_10072978 3300025933 Bacteria 3017
96 Ga0207670_10066910 3300025936 Bacteria 2470
97 Ga0207665_10242864 3300025939 Bacteria 1328
98 Ga0207691_10003591 3300025940 Bacteria 15077
99 Ga0207691_10018587 3300025940 Bacteria 6587
100 Ga0207689_10109387 3300025942 Bacteria 2271
101 Ga0207679_10006711 3300025945 Bacteria 7288
102 Ga0207667_10037893 3300025949 Bacteria 5152
103 Ga0207667_10215821 3300025949 Bacteria 1966
104 Ga0207651_10060332 3300025960 Bacteria 2632
105 Ga0207712_10374548 3300025961 Bacteria 1190
106 Ga0207668_10129649 3300025972 Bacteria 1924
107 Ga0207677_10086334 3300026023 Bacteria 2268
108 Ga0207703_10240854 3300026035 Bacteria 1626
109 Ga0207639_10222578 3300026041 Bacteria 1631
110 Ga0207678_10134760 3300026067 Bacteria 2108
111 Ga0207708_10082402 3300026075 Bacteria 2473
112 Ga0207702_10003914 3300026078 Bacteria 13407
113 Ga0207648_10045345 3300026089 Bacteria 3857
114 Ga0207674_10297664 3300026116 Bacteria 1562
115 Ga0207675_100058260 3300026118 Bacteria 3605
116 Ga0207683_10014152 3300026121 Bacteria 6797
117 Ga0207683_10060451 3300026121 Bacteria 3330
118 Ga0207698_10203169 3300026142 Bacteria 1776
119 Ga0268266_10062903 3300028379 Bacteria 3204
120 Ga0268266_10066835 3300028379 Bacteria 3110
121 Ga0268266_10122238 3300028379 Bacteria 2318
122 Ga0268265_10412164 3300028380 Bacteria 1252
123 Ga0268264_10168594 3300028381 Bacteria 1978
124 Ga0268264_10205556 3300028381 Bacteria 1804
125 Ga0265327_10002156 3300031251 Bacteria 21699
126 Ga0265327_10100767 3300031251 Bacteria 1394
127 Ga0316578_10059983 3300031728 Bacteria 2238
128 Ga0316577_10039537 3300031733 Bacteria 2639
129 Ga0307406_10098190 3300031901 Bacteria 1988
130 Ga0316580_10021700 3300032139 Bacteria 1980
131 Ga0316593_10001250 3300032168 Bacteria 5499
132 Ga0316592_1010487 3300033524 Bacteria 1871
133 Ga0316588_1010097 3300033528 Bacteria 1982
134 Ga0316596_1000965 3300033541 Bacteria 5495
135 Ga0373944_0021336 3300035089 Bacteria 1874
136 Ga0373943_0155023 3300035170 Bacteria 1243
137 Ga0373924_0070510 3300035410 Bacteria 1474
138 Ga0373933_0129616 3300035724 Bacteria 1585
139 Ga0373947_0253982 3300035725 Bacteria 1163
140 Ga0316584_0021926 3300036712 Bacteria 4651
141 Ga0373925_0147064 3300037068 Bacteria 1848
142 Ga0395900_0027826 3300037418 Bacteria 5792
143 Ga0436360_0540047 3300039438 Bacteria 5233
144 Ga0436361_1111979 3300039447 Bacteria 5811
145 Ga0436362_1119611 3300039453 Bacteria 1834
146 Ga0451577_0045656 3300042876 Bacteria 3921
147 Ga0451576_0001939 3300045051 Bacteria 33033
148 Ga0451576_0008596 3300045051 Bacteria 11963
149 Ga0495617_031539 3300046452 Bacteria 1779
150 Ga0495629_0081068 3300046459 Bacteria 2265
151 Ga0495580_0056733 3300046472 Bacteria 2758
152 Ga0495639_0016914 3300046475 Bacteria 3167
153 Ga0495606_0006673 3300046507 Bacteria 10580
154 Ga0495630_0114549 3300046517 Bacteria 2043
155 Ga0495665_0007298 3300046531 Bacteria 5969
156 Ga0495665_0087725 3300046531 Bacteria 1635
157 Ga0495621_0063201 3300046539 Bacteria 1348
158 Ga0495656_0000171 3300046615 Bacteria 22920
159 Ga0495656_0024936 3300046615 Bacteria 2367
160 Ga0495668_0118994 3300046616 Bacteria 1444
161 Ga0495635_0054994 3300046663 Bacteria 2742
162 Ga0495635_0167706 3300046663 Bacteria 1494
163 Ga0495657_0198676 3300046675 Bacteria 1223
164 Ga0495647_0007228 3300046681 Bacteria 3715
165 Ga0495647_0056730 3300046681 Bacteria 1536
166 Ga0495658_0003293 3300046683 Bacteria 8024
167 Ga0495658_0025473 3300046683 Bacteria 3161
168 Ga0495604_0137710 3300047317 Bacteria 1748
169 Ga0495636_0066788 3300047318 Bacteria 1529
170 Ga0495674_0192610 3300047319 Bacteria 1694
171 Ga0495677_0064442 3300047445 Bacteria 1362
172 Ga0495684_0231276 3300047471 Bacteria 1352
173 Ga0496100_0038532 3300048903 Bacteria 3029
174 Ga0496101_0009359 3300048904 Bacteria 6439
175 Ga0496102_0003126 3300048905 Bacteria 14046
176 Ga0496103_0017349 3300048906 Bacteria 4308
177 Ga0496104_0000688 3300048907 Bacteria 29108
178 Ga0496106_0009054 3300048909 Bacteria 7360
179 Ga0496106_0023997 3300048909 Bacteria 4532
180 Ga0496107_0062066 3300048910 Bacteria 2707
181 Ga0496108_0065363 3300048911 Bacteria 3066
182 Ga0496109_0078382 3300048912 Bacteria 3042
183 Ga0496110_0164338 3300048913 Bacteria 2012
184 Ga0496111_0195875 3300048914 Bacteria 1502
185 Ga0496114_0129815 3300048917 Bacteria 2175
186 Ga0496126_0382270 3300048929 Bacteria 1146
187 Ga0501036_0279492 3300049572 Bacteria 1397
188 Ga0501040_0006150 3300049576 Bacteria 7787
189 Ga0501041_0035943 3300049577 Bacteria 3002
190 Ga0501046_0151653 3300049580 Bacteria 1748
191 Ga0501048_0150819 3300049582 Bacteria 1644
192 Ga0501072_0350189 3300049588 Bacteria 1173
193 Ga0501075_0042697 3300049591 Bacteria 3400
194 Ga0501075_0121504 3300049591 Bacteria 1988
195 Ga0501076_0024613 3300049592 Bacteria 4656
196 Ga0501079_0044037 3300049741 Bacteria 3445
197 Ga0501045_0008007 3300049824 Bacteria 7360
198 nmdc:mga03683_465_c1 3300050489 Bacteria 11702
199 nmdc:mga07m45_59005_c1 3300050496 Bacteria 2171
200 nmdc:mga05p37_137731_c1 3300050507 Bacteria 2992
201 nmdc:mga09592_6050_c1 3300050508 Bacteria 9867
202 nmdc:mga0qj67_1478_c1 3300050509 Bacteria 16478
203 nmdc:mga08y16_91403_c1 3300050511 Bacteria 3172
204 nmdc:mga08y16_92168_c1 3300050511 Bacteria 3157
205 nmdc:mga0n895_363039_c1 3300050512 Bacteria 1466
206 nmdc:mga08x19_4639_c1 3300050514 Bacteria 8154
207 nmdc:mga0sz30_16631_c1 3300050516 Bacteria 2924
208 nmdc:mga0sz30_2902_c1 3300050516 Bacteria 6141
209 Ga0500651_0137156 3300053093 Bacteria 1477
210 Ga0500566_0048597 3300053094 Bacteria 2432
211 Ga0500556_0000119 3300053104 Bacteria 68528
212 Ga0501082_0065658 3300060353 Bacteria 3125

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005335 Ga0070666_10206335 Ga0070666_102063351 289
2 3300049591 Ga0501075_0121504 Ga0501075_0121504_1069_1947 292
3 3300046663 Ga0495635_0167706 Ga0495635_0167706_517_1422 298
4 3300005436 Ga0070713_100000414 Ga0070713_10000041416 312
5 3300025928 Ga0207700_10001649 Ga0207700_1000164910 312
6 3300046616 Ga0495668_0118994 Ga0495668_0118994_486_1433 315
7 3300048929 Ga0496126_0382270 Ga0496126_0382270_76_1023 315
8 3300047318 Ga0495636_0066788 Ga0495636_0066788_196_1185 320
9 3300005456 Ga0070678_100142298 Ga0070678_1001422982 322
10 3300014497 Ga0182008_10051654 Ga0182008_100516542 322
11 3300015261 Ga0182006_1039008 Ga0182006_10390082 322
12 3300015262 Ga0182007_10036068 Ga0182007_100360682 322
13 3300026121 Ga0207683_10014152 Ga0207683_100141524 322
14 3300049741 Ga0501079_0044037 Ga0501079_0044037_933_1988 327
15 3300017792 Ga0163161_10045424 Ga0163161_100454241 328
16 3300050512 nmdc:mga0n895_363039_c1 nmdc:mga0n895_363039_c1_370_1419 328
17 3300053104 Ga0500556_0000119 Ga0500556_0000119_60790_61899 328
18 3300013308 Ga0157375_10150889 Ga0157375_101508892 329
19 3300014325 Ga0163163_10449808 Ga0163163_104498081 329
20 3300013104 Ga0157370_10112771 Ga0157370_101127712 331
21 3300035170 Ga0373943_0155023 Ga0373943_0155023_28_1047 331
22 3300035725 Ga0373947_0253982 Ga0373947_0253982_111_1130 331
23 3300039438 Ga0436360_0540047 Ga0436360_0540047_3294_4292 332
24 3300015683 Ga0183362_10001 Ga0183362_100011099 333
25 3300046615 Ga0495656_0024936 Ga0495656_0024936_20_1060 333
26 3300006195 Ga0075366_10036961 Ga0075366_100369613 334
27 3300013306 Ga0163162_10026791 Ga0163162_100267913 334
28 3300017792 Ga0163161_10010125 Ga0163161_100101256 334
29 3300026041 Ga0207639_10222578 Ga0207639_102225782 334
30 3300031251 Ga0265327_10002156 Ga0265327_100021562 334
31 3300046459 Ga0495629_0081068 Ga0495629_0081068_815_1831 334
32 3300046475 Ga0495639_0016914 Ga0495639_0016914_1217_2233 334
33 3300046539 Ga0495621_0063201 Ga0495621_0063201_96_1109 334
34 3300046615 Ga0495656_0000171 Ga0495656_0000171_14893_15906 334
35 3300046675 Ga0495657_0198676 Ga0495657_0198676_85_1101 334
36 3300047445 Ga0495677_0064442 Ga0495677_0064442_328_1341 334
37 3300048903 Ga0496100_0038532 Ga0496100_0038532_1731_2747 334
38 3300048904 Ga0496101_0009359 Ga0496101_0009359_3755_4771 334
39 3300048905 Ga0496102_0003126 Ga0496102_0003126_7958_8974 334
40 3300048906 Ga0496103_0017349 Ga0496103_0017349_2184_3200 334
41 3300048907 Ga0496104_0000688 Ga0496104_0000688_10565_11581 334
42 3300048909 Ga0496106_0023997 Ga0496106_0023997_1336_2352 334
43 3300048910 Ga0496107_0062066 Ga0496107_0062066_112_1128 334
44 3300048911 Ga0496108_0065363 Ga0496108_0065363_1441_2457 334
45 3300048912 Ga0496109_0078382 Ga0496109_0078382_1915_2931 334
46 3300048913 Ga0496110_0164338 Ga0496110_0164338_554_1570 334
47 3300048917 Ga0496114_0129815 Ga0496114_0129815_730_1746 334
48 3300046531 Ga0495665_0087725 Ga0495665_0087725_243_1319 335
49 3300046663 Ga0495635_0054994 Ga0495635_0054994_1651_2727 335
50 3300046681 Ga0495647_0056730 Ga0495647_0056730_260_1336 335
51 3300046683 Ga0495658_0025473 Ga0495658_0025473_191_1267 335
52 3300047471 Ga0495684_0231276 Ga0495684_0231276_255_1331 335
53 3300005330 Ga0070690_100114758 Ga0070690_1001147582 336
54 3300005335 Ga0070666_10124824 Ga0070666_101248242 336
55 3300005343 Ga0070687_100022431 Ga0070687_1000224313 336
56 3300005353 Ga0070669_100111605 Ga0070669_1001116052 336
57 3300005355 Ga0070671_100097817 Ga0070671_1000978172 336
58 3300005364 Ga0070673_100057174 Ga0070673_1000571743 336
59 3300005364 Ga0070673_100224354 Ga0070673_1002243542 336
60 3300005366 Ga0070659_100297194 Ga0070659_1002971942 336
61 3300005457 Ga0070662_100038716 Ga0070662_1000387161 336
62 3300005457 Ga0070662_100238148 Ga0070662_1002381481 336
63 3300005466 Ga0070685_10104311 Ga0070685_101043111 336
64 3300005539 Ga0068853_100138496 Ga0068853_1001384962 336
65 3300005548 Ga0070665_100027676 Ga0070665_1000276763 336
66 3300005618 Ga0068864_100149900 Ga0068864_1001499001 336
67 3300005844 Ga0068862_100300136 Ga0068862_1003001361 336
68 3300006177 Ga0075362_10000865 Ga0075362_100008659 336
69 3300006186 Ga0075369_10000105 Ga0075369_100001054 336
70 3300006353 Ga0075370_10064965 Ga0075370_100649652 336
71 3300006358 Ga0068871_100105048 Ga0068871_1001050482 336
72 3300006881 Ga0068865_100017283 Ga0068865_1000172834 336
73 3300009094 Ga0111539_10305726 Ga0111539_103057262 336
74 3300013306 Ga0163162_10053194 Ga0163162_100531944 336
75 3300013306 Ga0163162_10194563 Ga0163162_101945632 336
76 3300013308 Ga0157375_10148998 Ga0157375_101489982 336
77 3300013308 Ga0157375_10208031 Ga0157375_102080311 336
78 3300014968 Ga0157379_10483787 Ga0157379_104837871 336
79 3300025315 Ga0207697_10020067 Ga0207697_100200671 336
80 3300025901 Ga0207688_10038389 Ga0207688_100383893 336
81 3300025907 Ga0207645_10016487 Ga0207645_100164872 336
82 3300025908 Ga0207643_10138785 Ga0207643_101387852 336
83 3300025918 Ga0207662_10035101 Ga0207662_100351013 336
84 3300025923 Ga0207681_10228077 Ga0207681_102280772 336
85 3300025933 Ga0207706_10072978 Ga0207706_100729783 336
86 3300025940 Ga0207691_10018587 Ga0207691_100185874 336
87 3300025942 Ga0207689_10109387 Ga0207689_101093871 336
88 3300025960 Ga0207651_10060332 Ga0207651_100603321 336
89 3300026023 Ga0207677_10086334 Ga0207677_100863343 336
90 3300026035 Ga0207703_10240854 Ga0207703_102408542 336
91 3300026089 Ga0207648_10045345 Ga0207648_100453453 336
92 3300026121 Ga0207683_10060451 Ga0207683_100604511 336
93 3300026142 Ga0207698_10203169 Ga0207698_102031692 336
94 3300028379 Ga0268266_10062903 Ga0268266_100629033 336
95 3300028380 Ga0268265_10412164 Ga0268265_104121641 336
96 3300028381 Ga0268264_10205556 Ga0268264_102055562 336
97 3300050489 nmdc:mga03683_465_c1 nmdc:mga03683_465_c1_4885_5895 336
98 3300050496 nmdc:mga07m45_59005_c1 nmdc:mga07m45_59005_c1_981_1991 336
99 3300050511 nmdc:mga08y16_91403_c1 nmdc:mga08y16_91403_c1_378_1454 336
100 3300050516 nmdc:mga0sz30_16631_c1 nmdc:mga0sz30_16631_c1_1381_2391 336
101 3300053093 Ga0500651_0137156 Ga0500651_0137156_365_1375 336
102 3300026067 Ga0207678_10134760 Ga0207678_101347602 337
103 3300050514 nmdc:mga08x19_4639_c1 nmdc:mga08x19_4639_c1_2137_3219 337
104 3300006871 Ga0075434_100510222 Ga0075434_1005102221 338
105 3300026116 Ga0207674_10297664 Ga0207674_102976642 338
106 3300042876 Ga0451577_0045656 Ga0451577_0045656_722_1738 338
107 3300005981 Ga0081538_10025801 Ga0081538_100258013 339
108 3300006186 Ga0075369_10006192 Ga0075369_100061922 339
109 3300007265 Ga0099794_10017341 Ga0099794_100173412 339
110 3300031728 Ga0316578_10059983 Ga0316578_100599832 339
111 3300031733 Ga0316577_10039537 Ga0316577_100395373 339
112 3300032139 Ga0316580_10021700 Ga0316580_100217003 339
113 3300032168 Ga0316593_10001250 Ga0316593_100012504 339
114 3300033524 Ga0316592_1010487 Ga0316592_10104871 339
115 3300033528 Ga0316588_1010097 Ga0316588_10100971 339
116 3300033541 Ga0316596_1000965 Ga0316596_10009654 339
117 3300036712 Ga0316584_0021926 Ga0316584_0021926_1148_2167 339
118 3300049572 Ga0501036_0279492 Ga0501036_0279492_65_1084 339
119 3300049576 Ga0501040_0006150 Ga0501040_0006150_4807_5826 339
120 3300049577 Ga0501041_0035943 Ga0501041_0035943_486_1505 339
121 3300049580 Ga0501046_0151653 Ga0501046_0151653_477_1496 339
122 3300049582 Ga0501048_0150819 Ga0501048_0150819_206_1225 339
123 3300049588 Ga0501072_0350189 Ga0501072_0350189_20_1039 339
124 3300049591 Ga0501075_0042697 Ga0501075_0042697_2136_3155 339
125 3300049592 Ga0501076_0024613 Ga0501076_0024613_829_1848 339
126 3300049824 Ga0501045_0008007 Ga0501045_0008007_4289_5308 339
127 3300050516 nmdc:mga0sz30_2902_c1 nmdc:mga0sz30_2902_c1_3809_4828 339
128 3300060353 Ga0501082_0065658 Ga0501082_0065658_947_1966 339
129 3300005543 Ga0070672_100001344 Ga0070672_10000134412 340
130 3300025940 Ga0207691_10003591 Ga0207691_100035912 340
131 3300035089 Ga0373944_0021336 Ga0373944_0021336_460_1566 340
132 3300035410 Ga0373924_0070510 Ga0373924_0070510_332_1438 340
133 3300035724 Ga0373933_0129616 Ga0373933_0129616_280_1386 340
134 3300046472 Ga0495580_0056733 Ga0495580_0056733_1509_2615 340
135 3300046517 Ga0495630_0114549 Ga0495630_0114549_30_1136 340
136 3300046531 Ga0495665_0007298 Ga0495665_0007298_246_1352 340
137 3300046681 Ga0495647_0007228 Ga0495647_0007228_2152_3258 340
138 3300046683 Ga0495658_0003293 Ga0495658_0003293_2094_3200 340
139 3300047317 Ga0495604_0137710 Ga0495604_0137710_204_1310 340
140 3300047319 Ga0495674_0192610 Ga0495674_0192610_230_1336 340
141 3300053094 Ga0500566_0048597 Ga0500566_0048597_1001_2107 340
142 3300005456 Ga0070678_100280860 Ga0070678_1002808601 341
143 3300028379 Ga0268266_10066835 Ga0268266_100668353 341
144 3300037418 Ga0395900_0027826 Ga0395900_0027826_4609_5634 341
145 iso_pu_bacteria 2989771324 2989774973 341
146 3300005340 Ga0070689_100175702 Ga0070689_1001757022 342
147 3300005365 Ga0070688_100090093 Ga0070688_1000900932 342
148 3300006177 Ga0075362_10095494 Ga0075362_100954943 342
149 3300006844 Ga0075428_100265375 Ga0075428_1002653752 342
150 3300006871 Ga0075434_100107546 Ga0075434_1001075462 342
151 3300006880 Ga0075429_100087468 Ga0075429_1000874683 342
152 3300009094 Ga0111539_10407016 Ga0111539_104070162 342
153 3300013308 Ga0157375_10023123 Ga0157375_100231238 342
154 3300025936 Ga0207670_10066910 Ga0207670_100669103 342
155 3300025961 Ga0207712_10374548 Ga0207712_103745481 342
156 3300026075 Ga0207708_10082402 Ga0207708_100824023 342
157 3300026118 Ga0207675_100058260 Ga0207675_1000582605 342
158 3300028381 Ga0268264_10168594 Ga0268264_101685942 342
159 3300037068 Ga0373925_0147064 Ga0373925_0147064_405_1523 342
160 3300048914 Ga0496111_0195875 Ga0496111_0195875_261_1379 342
161 3300050507 nmdc:mga05p37_137731_c1 nmdc:mga05p37_137731_c1_776_1894 342
162 3300050508 nmdc:mga09592_6050_c1 nmdc:mga09592_6050_c1_2465_3583 342
163 3300050509 nmdc:mga0qj67_1478_c1 nmdc:mga0qj67_1478_c1_11993_13111 342
164 3300050511 nmdc:mga08y16_92168_c1 nmdc:mga08y16_92168_c1_1221_2339 342
165 3300013297 Ga0157378_10000360 Ga0157378_1000036032 343
166 3300031251 Ga0265327_10100767 Ga0265327_101007672 343
167 3300005339 Ga0070660_100002569 Ga0070660_1000025693 344
168 3300005344 Ga0070661_100031021 Ga0070661_1000310214 344
169 3300005347 Ga0070668_100052500 Ga0070668_1000525002 344
170 3300005355 Ga0070671_100131391 Ga0070671_1001313912 344
171 3300005367 Ga0070667_100130852 Ga0070667_1001308521 344
172 3300005457 Ga0070662_100001413 Ga0070662_10000141311 344
173 3300005563 Ga0068855_100015734 Ga0068855_1000157347 344
174 3300005564 Ga0070664_100002975 Ga0070664_1000029752 344
175 3300005614 Ga0068856_100034239 Ga0068856_1000342392 344
176 3300013100 Ga0157373_10002610 Ga0157373_100026104 344
177 3300013102 Ga0157371_10003811 Ga0157371_100038119 344
178 3300013297 Ga0157378_10259037 Ga0157378_102590372 344
179 3300013307 Ga0157372_10039485 Ga0157372_100394852 344
180 3300025919 Ga0207657_10003958 Ga0207657_100039586 344
181 3300025920 Ga0207649_10046215 Ga0207649_100462153 344
182 3300025931 Ga0207644_10105919 Ga0207644_101059192 344
183 3300025932 Ga0207690_10001976 Ga0207690_100019767 344
184 3300025933 Ga0207706_10003196 Ga0207706_100031969 344
185 3300025945 Ga0207679_10006711 Ga0207679_100067116 344
186 3300025949 Ga0207667_10037893 Ga0207667_100378932 344
187 3300025972 Ga0207668_10129649 Ga0207668_101296492 344
188 3300026078 Ga0207702_10003914 Ga0207702_100039142 344
189 3300028379 Ga0268266_10122238 Ga0268266_101222383 344
190 3300031901 Ga0307406_10098190 Ga0307406_100981902 344
191 3300046452 Ga0495617_031539 Ga0495617_031539_263_1297 344
192 3300046507 Ga0495606_0006673 Ga0495606_0006673_4007_5041 344
193 3300048909 Ga0496106_0009054 Ga0496106_0009054_594_1703 344
194 3300009551 Ga0105238_10012473 Ga0105238_100124735 345
195 3300025924 Ga0207694_10052036 Ga0207694_100520362 345
196 3300025949 Ga0207667_10215821 Ga0207667_102158211 345
197 3300006914 Ga0075436_100005365 Ga0075436_1000053653 346
198 3300005434 Ga0070709_10106357 Ga0070709_101063573 347
199 3300005436 Ga0070713_100128691 Ga0070713_1001286912 347
200 3300009093 Ga0105240_10187934 Ga0105240_101879342 347
201 3300009093 Ga0105240_10207828 Ga0105240_102078282 347
202 3300009545 Ga0105237_10042781 Ga0105237_100427812 347
203 3300025939 Ga0207665_10242864 Ga0207665_102428641 347
204 3300039447 Ga0436361_1111979 Ga0436361_1111979_3452_4495 347
205 3300039453 Ga0436362_1119611 Ga0436362_1119611_179_1222 347
206 iso_pu_bacteria 2919450847 2919452004 347
207 iso_pu_bacteria 8001845381 8001849910 347
208 3300005539 Ga0068853_100092863 Ga0068853_1000928632 348
209 3300005937 Ga0081455_10000238 Ga0081455_1000023812 348
210 3300009551 Ga0105238_10117699 Ga0105238_101176993 348
211 3300003659 JGI25404J52841_10000004 JGI25404J52841_100000046 349
212 3300005981 Ga0081538_10011945 Ga0081538_100119452 349
213 3300025901 Ga0207688_10207157 Ga0207688_102071571 349
214 3300045051 Ga0451576_0001939 Ga0451576_0001939_26756_27841 349
215 3300045051 Ga0451576_0008596 Ga0451576_0008596_5079_6176 349
216 iso_pu_bacteria 2842775625 2842779772 349

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01734

Patatin

Patatin-like phospholipase

11

210

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fya-assembly1.cif.gz_B cubic crystal of the native plpd 0.6995 14 334
5fya-assembly1.cif.gz_B cubic crystal of the native plpd 0.6946 14 334
5fya-assembly1.cif.gz_A cubic crystal of the native plpd 0.6929 18 332
5fqu-assembly1.cif.gz_B orthorhombic crystal structure of of plpd (selenomethionine derivative) 0.6924 14 334
5fqu-assembly1.cif.gz_B orthorhombic crystal structure of of plpd (selenomethionine derivative) 0.69 14 334
ID Description Score Start End Superfamily
af_Q54JJ8_18_280_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.7428 9 294 3.40.1090.10
af_Q54JJ8_18_280_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.7326 9 294 3.40.1090.10
af_B0G109_19_215_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.6764 4 207 3.40.1090.10
af_C0HET5_2_260_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6759 10 50 3.40.50.2000
af_O69695_801_1044_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.6687 16 299 3.40.1090.10
ID Description Score Start End GO Terms
AF-A0A4Q7U203-F1-model_v4 deleted 0.9685 12 349
AF-A0A4Q7U203-F1-model_v4 deleted 0.9629 12 349
AF-A0A2Z4PFA3-F1-model_v4 deleted 0.9602 12 346
AF-A0A2M7Y9L3-F1-model_v4 Alpha/beta hydrolase 0.9577 11 243 GO:0016042
GO:0016787
AF-A0A1E4C320-F1-model_v4 Alpha/beta hydrolase 0.9561 38 348 GO:0016042
GO:0016787

Feature Viewer

pLDDT pTM Quality
88.44 0.9 High
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Predicted Structure (AlphaFold2)

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