F327526

General Info

Members Datasets Scaffolds Average Seq Length
216 151 211 289

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10262671|Ga0111539_102626712
Length 342
Sequence LAIEASCQGAEKIGIGQGIQKTLNGGLIPFRSIFRLPDNESSFRLHHCYQYLYEGLIMEKEKEIPEQHQTRQPGIEAEMTPEPDSTVEGYKGSGKLESKVAIITGGDSGIGRAVAVAFAKEGADIVVVYLDEHGDANDTKKEIEQCGKRCILIAGDVGNEEFCTEVAAKTLSELGHIDILVNNAAEQHVREDIMDIDTAQLEKTFRTNIFSMFYMVKAVLPHFKGGARIINTTSVTAYKGSPHLLDYSATKGAIVAFTRSLSLQLVERQILVNAVAPGPIWTPLIPSTFPPEKVGKFGKDVPMKRPGQPDEVAPCYVFLASRDCSYISGQVLHPNGGNIVNG

Samples

Sample ID Description Type Environment
1 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
2 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
3 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
4 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
5 2738541278 Niastella sp. CF465 Isolate Unclassified
6 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300012491 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610 Metagenome Rhizosphere
50 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
86 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
93 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
94 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
95 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
96 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
105 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
106 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
126 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
127 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
130 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
139 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
140 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
141 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
142 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
143 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
144 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
145 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
148 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
150 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
151 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.91
Metatranscriptomes 2.31
Isolates 2.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.43
Nodule 0
Rhizoplane 1.85
Rhizosphere 80.56
Stem 0
Stem Tuber 0
Unclassified 4.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000065 3300003187 Bacteria 145136
2 JGI25151J46595_10003848 3300003187 Bacteria 8121
3 rootL2_10164112 3300003322 Unclassified 1565
4 rootH1_10016395 3300003316 Bacteria 5664
5 rootH1_10016395 3300003323 Bacteria 39282
6 Ga0055526_1020101 3300003771 Bacteria 2396
7 Ga0055537_1000996 3300003773 Bacteria 12822
8 Ga0055536_1000026 3300003781 Bacteria 166220
9 Ga0055534_1000093 3300003784 Bacteria 70047
10 Ga0055534_1000523 3300003784 Bacteria 20708
11 Ga0070676_10048406 3300005328 Bacteria 2485
12 Ga0070682_100076470 3300005337 Bacteria 2155
13 Ga0070660_100000895 3300005339 Bacteria 19956
14 Ga0070660_100077364 3300005339 Bacteria 2607
15 Ga0070661_100071288 3300005344 Bacteria 2557
16 Ga0070661_100206165 3300005344 Bacteria 1503
17 Ga0070669_100313433 3300005353 Bacteria 1265
18 Ga0070671_100032005 3300005355 Bacteria 4348
19 Ga0070674_100014727 3300005356 Bacteria 4867
20 Ga0070673_100054324 3300005364 Bacteria 3150
21 Ga0070688_100371518 3300005365 Bacteria 1052
22 Ga0070659_100001369 3300005366 Bacteria 17540
23 Ga0070678_100362877 3300005456 Bacteria 1249
24 Ga0070698_100060736 3300005471 Unclassified 3813
25 Ga0068853_100135142 3300005539 Bacteria 2210
26 Ga0070672_100050528 3300005543 Bacteria 3239
27 Ga0070686_100008416 3300005544 Bacteria 5775
28 Ga0070664_100002673 3300005564 Bacteria 14389
29 Ga0070664_100008683 3300005564 Bacteria 8225
30 Ga0070702_100056760 3300005615 Bacteria 2263
31 Ga0068864_100068199 3300005618 Bacteria 3090
32 Ga0068861_100353349 3300005719 Unclassified 1290
33 Ga0068851_10002749 3300005834 Bacteria 7745
34 Ga0068858_100062648 3300005842 Bacteria 3439
35 Ga0081538_10042442 3300005981 Bacteria 2871
36 Ga0081539_10000844 3300005985 Bacteria 58650
37 Ga0075366_10014950 3300006195 Unclassified 4438
38 Ga0097621_100081959 3300006237 Bacteria 2686
39 Ga0097621_100148952 3300006237 Bacteria 2006
40 Ga0075428_100437811 3300006844 Bacteria 1400
41 Ga0075428_100523421 3300006844 Bacteria 1268
42 Ga0075430_100045756 3300006846 Bacteria 3696
43 Ga0075431_100098356 3300006847 Bacteria 3021
44 Ga0075431_100300214 3300006847 Bacteria 1623
45 Ga0075431_100504514 3300006847 Bacteria 1201
46 Ga0075434_100449285 3300006871 Bacteria 1310
47 Ga0105244_10000004 3300009036 Bacteria 492478
48 Ga0111539_10068286 3300009094 Bacteria 4196
49 Ga0111539_10159157 3300009094 Bacteria 2641
50 Ga0111539_10262671 3300009094 Bacteria 2010
51 Ga0105245_10263819 3300009098 Bacteria 1677
52 Ga0114129_10263424 3300009147 Bacteria 2309
53 Ga0114129_10379585 3300009147 Bacteria 1867
54 Ga0105248_10005403 3300009177 Bacteria 14046
55 Ga0105239_10248044 3300010375 Bacteria 2000
56 Ga0105239_10319265 3300010375 Unclassified 1751
57 Ga0157329_1000035 3300012491 Bacteria 2858
58 Ga0157326_1001066 3300012513 Bacteria 3094
59 Ga0157370_10537408 3300013104 Bacteria 1072
60 Ga0163162_10390247 3300013306 Bacteria 1525
61 Ga0157372_10396411 3300013307 Bacteria 1608
62 Ga0157380_10076263 3300014326 Bacteria 2728
63 Ga0157376_10401495 3300014969 Bacteria 1326
64 Ga0163161_10064641 3300017792 Bacteria 2669
65 Ga0209565_1000145 3300025263 Bacteria 97893
66 Ga0209675_1000026 3300025291 Bacteria 284716
67 Ga0209675_1000139 3300025291 Bacteria 97978
68 Ga0209676_1000059 3300025292 Bacteria 344882
69 Ga0209025_1000066 3300025294 Bacteria 298742
70 Ga0209025_1000159 3300025294 Bacteria 167081
71 Ga0209564_1000161 3300025295 Bacteria 162489
72 Ga0209564_1000851 3300025295 Bacteria 40736
73 Ga0209256_1001729 3300025299 Bacteria 20927
74 Ga0207688_10073744 3300025901 Bacteria 1941
75 Ga0207645_10028483 3300025907 Bacteria 3606
76 Ga0207707_10088388 3300025912 Bacteria 2707
77 Ga0207662_10017107 3300025918 Bacteria 4098
78 Ga0207649_10073679 3300025920 Bacteria 2188
79 Ga0207681_10325834 3300025923 Bacteria 1223
80 Ga0207659_10379755 3300025926 Bacteria 1178
81 Ga0207687_10175907 3300025927 Bacteria 1654
82 Ga0207690_10001403 3300025932 Bacteria 15139
83 Ga0207669_10013111 3300025937 Bacteria 4104
84 Ga0207669_10192406 3300025937 Bacteria 1473
85 Ga0207691_10087635 3300025940 Bacteria 2792
86 Ga0207679_10204250 3300025945 Bacteria 1653
87 Ga0207658_10078433 3300025986 Bacteria 2524
88 Ga0207677_10024266 3300026023 Bacteria 3764
89 Ga0207639_10253823 3300026041 Bacteria 1535
90 Ga0207702_10658458 3300026078 Bacteria 1030
91 Ga0207676_10204587 3300026095 Bacteria 1747
92 Ga0207674_10029241 3300026116 Bacteria 5804
93 Ga0207683_10084390 3300026121 Bacteria 2823
94 Ga0207428_10071720 3300027907 Bacteria 2720
95 Ga0207428_10110182 3300027907 Bacteria 2120
96 Ga0307512_10197311 3300030522 Bacteria 1097
97 Ga0307416_100040960 3300032002 Bacteria 3604
98 Ga0307510_10021489 3300033180 Bacteria 7519
99 Ga0373931_0024532 3300035691 Bacteria 3056
100 Ga0395899_0001678 3300037312 Bacteria 18458
101 Ga0395899_0102304 3300037312 Bacteria 2067
102 Ga0395900_0000576 3300037418 Bacteria 50658
103 Ga0395900_0003321 3300037418 Bacteria 17401
104 Ga0395900_0006370 3300037418 Bacteria 12302
105 Ga0395900_0022496 3300037418 Bacteria 6448
106 Ga0395900_0065291 3300037418 Bacteria 3739
107 Ga0395898_0001619 3300037466 Bacteria 30581
108 Ga0395898_0005643 3300037466 Bacteria 13491
109 Ga0395905_0003144 3300037471 Bacteria 17789
110 Ga0395905_0138053 3300037471 Bacteria 2294
111 Ga0395901_0018284 3300038443 Bacteria 7156
112 Ga0395901_0159807 3300038443 Bacteria 2367
113 Ga0439461_0027734 3300041410 Bacteria 1163
114 Ga0451851_0868971 3300041507 Bacteria 1386
115 Ga0451853_1852126 3300041512 Bacteria 3154
116 Ga0439442_026794 3300042002 Bacteria 1201
117 Ga0439434_0009858 3300042435 Bacteria 2811
118 Ga0451577_0030109 3300042876 Bacteria 4905
119 Ga0451577_0144884 3300042876 Bacteria 2136
120 Ga0453684_0245288 3300044712 Unclassified 2060
121 Ga0466970_0009855 3300044765 Bacteria 4839
122 Ga0466960_0017279 3300044901 Bacteria 3143
123 Ga0451576_0214717 3300045051 Bacteria 2009
124 Ga0495627_001668 3300046453 Bacteria 12260
125 Ga0495606_0123678 3300046507 Bacteria 1545
126 Ga0495660_0000363 3300046810 Bacteria 39855
127 Ga0495686_0011100 3300047472 Bacteria 6363
128 Ga0496109_0503188 3300048912 Bacteria 1144
129 Ga0496112_0360793 3300048915 Bacteria 1395
130 Ga0496114_0001887 3300048917 Bacteria 15910
131 Ga0496114_0215032 3300048917 Bacteria 1686
132 Ga0501031_0008273 3300049568 Bacteria 6766
133 Ga0501032_0005072 3300049569 Bacteria 9836
134 Ga0501032_0023854 3300049569 Bacteria 4224
135 Ga0501032_0048696 3300049569 Bacteria 2861
136 Ga0501033_0002795 3300049570 Bacteria 14619
137 Ga0501033_0032515 3300049570 Bacteria 3917
138 Ga0501033_0042003 3300049570 Bacteria 3410
139 Ga0501034_0016840 3300049571 Bacteria 7494
140 Ga0501034_0038904 3300049571 Bacteria 4818
141 Ga0501036_0020674 3300049572 Bacteria 5529
142 Ga0501036_0021892 3300049572 Bacteria 5374
143 Ga0501036_0033289 3300049572 Unclassified 4358
144 Ga0501036_0182910 3300049572 Bacteria 1764
145 Ga0501036_0247574 3300049572 Bacteria 1494
146 Ga0501037_0090462 3300049573 Bacteria 2213
147 Ga0501037_0101683 3300049573 Bacteria 2074
148 Ga0501037_0131223 3300049573 Bacteria 1796
149 Ga0501038_0011445 3300049574 Bacteria 8094
150 Ga0501038_0019597 3300049574 Bacteria 6094
151 Ga0501038_0029416 3300049574 Bacteria 4869
152 Ga0501038_0030583 3300049574 Bacteria 4763
153 Ga0501038_0031410 3300049574 Unclassified 4693
154 Ga0501038_0137353 3300049574 Bacteria 2002
155 Ga0501039_0103710 3300049575 Bacteria 2220
156 Ga0501040_0010779 3300049576 Bacteria 5973
157 Ga0501042_0000976 3300049578 Bacteria 16174
158 Ga0501043_0013611 3300049579 Bacteria 6364
159 Ga0501043_0059746 3300049579 Bacteria 2992
160 Ga0501043_0121201 3300049579 Bacteria 2051
161 Ga0501046_0006526 3300049580 Bacteria 10317
162 Ga0501046_0112574 3300049580 Bacteria 2078
163 Ga0501047_0010013 3300049581 Bacteria 8961
164 Ga0501047_0037356 3300049581 Unclassified 4697
165 Ga0501047_0051299 3300049581 Bacteria 3985
166 Ga0501047_0183068 3300049581 Bacteria 1961
167 Ga0501048_0068385 3300049582 Unclassified 2509
168 Ga0501068_0001292 3300049584 Bacteria 13288
169 Ga0501070_0044430 3300049586 Bacteria 3697
170 Ga0501070_0184718 3300049586 Bacteria 1715
171 Ga0501257_014669 3300049686 Unclassified 1806
172 Ga0501225_0019242 3300049705 Bacteria 1890
173 Ga0501035_0000426 3300049822 Bacteria 47492
174 Ga0501035_0048373 3300049822 Bacteria 3814
175 Ga0501035_0052115 3300049822 Bacteria 3662
176 Ga0501035_0068571 3300049822 Bacteria 3144
177 Ga0501044_0005736 3300049823 Bacteria 13751
178 Ga0501044_0014107 3300049823 Bacteria 8626
179 Ga0501044_0054880 3300049823 Bacteria 4093
180 Ga0501045_0020523 3300049824 Bacteria 4720
181 nmdc:mga0k408_38796_c1 3300050493 Unclassified 2735
182 nmdc:mga0k408_620_c1 3300050493 Bacteria 19557
183 nmdc:mga05p37_120275_c1 3300050507 Bacteria 3226
184 nmdc:mga05p37_1492_c2 3300050507 Bacteria 23194
185 nmdc:mga05p37_26521_c1 3300050507 Bacteria 7047
186 nmdc:mga05p37_4339_c1 3300050507 Bacteria 16556
187 nmdc:mga09592_3594_c1 3300050508 Bacteria 12511
188 nmdc:mga0qj67_24983_c1 3300050509 Bacteria 4610
189 nmdc:mga06r32_22126_c1 3300050510 Bacteria 5874
190 nmdc:mga06r32_62248_c1 3300050510 Bacteria 3595
191 nmdc:mga08y16_127074_c1 3300050511 Bacteria 2652
192 nmdc:mga08y16_217317_c1 3300050511 Bacteria 1979
193 nmdc:mga08y16_64627_c1 3300050511 Bacteria 3820
194 nmdc:mga0n895_434180_c1 3300050512 Bacteria 1327
195 nmdc:mga0a205_6173_c1 3300050515 Bacteria 10811
196 Ga0500644_0095169 3300053088 Unclassified 1122
197 Ga0500646_0020532 3300053090 Bacteria 1755
198 Ga0500583_0000028 3300053092 Bacteria 108276
199 Ga0500583_0002529 3300053092 Bacteria 5520
200 Ga0500641_0000331 3300053096 Bacteria 17527
201 Ga0500641_0031828 3300053096 Bacteria 2082
202 Ga0500594_0014802 3300053118 Bacteria 1873
203 Ga0500589_000339 3300053147 Bacteria 9887
204 Ga0500622_0114009 3300053156 Bacteria 1317
205 Ga0500611_019849 3300053727 Bacteria 1260
206 Ga0501084_0205012 3300054114 Bacteria 1664
207 Ga0587088_002607 3300059508 Bacteria 2078
208 Ga0587091_001658 3300059511 Bacteria 2473
209 Ga0587062_001253 3300059639 Bacteria 2130
210 Ga0587076_001758 3300059645 Bacteria 2291
211 Ga0587111_0011501 3300060346 Bacteria 1544

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0247574 Ga0501036_0247574_646_1437 263
2 3300054114 Ga0501084_0205012 Ga0501084_0205012_326_1117 263
3 3300026041 Ga0207639_10253823 Ga0207639_102538232 265
4 3300046507 Ga0495606_0123678 Ga0495606_0123678_333_1340 266
5 3300047472 Ga0495686_0011100 Ga0495686_0011100_4115_5101 266
6 3300046810 Ga0495660_0000363 Ga0495660_0000363_31694_32701 267
7 3300044765 Ga0466970_0009855 Ga0466970_0009855_3909_4763 270
8 3300025986 Ga0207658_10078433 Ga0207658_100784332 271
9 3300005981 Ga0081538_10042442 Ga0081538_100424422 272
10 3300005339 Ga0070660_100077364 Ga0070660_1000773643 273
11 3300005539 Ga0068853_100135142 Ga0068853_1001351421 273
12 3300049572 Ga0501036_0182910 Ga0501036_0182910_255_1289 273
13 3300049574 Ga0501038_0030583 Ga0501038_0030583_55_1089 273
14 3300049574 Ga0501038_0137353 Ga0501038_0137353_734_1615 273
15 3300049579 Ga0501043_0121201 Ga0501043_0121201_883_1917 273
16 3300049580 Ga0501046_0112574 Ga0501046_0112574_660_1694 273
17 3300049581 Ga0501047_0010013 Ga0501047_0010013_2423_3457 273
18 3300049586 Ga0501070_0184718 Ga0501070_0184718_46_1080 273
19 3300049823 Ga0501044_0054880 Ga0501044_0054880_225_1259 273
20 3300025912 Ga0207707_10088388 Ga0207707_100883882 274
21 3300037471 Ga0395905_0138053 Ga0395905_0138053_10_882 274
22 3300010375 Ga0105239_10319265 Ga0105239_103192651 275
23 3300009094 Ga0111539_10068286 Ga0111539_100682864 276
24 3300049581 Ga0501047_0051299 Ga0501047_0051299_2322_3389 276
25 3300050511 nmdc:mga08y16_217317_c1 nmdc:mga08y16_217317_c1_1031_1900 276
26 3300032002 Ga0307416_100040960 Ga0307416_1000409602 277
27 iso_pu_bacteria 2511231026 2511385844 277
28 iso_pu_bacteria 2513020052 2513235597 277
29 3300005344 Ga0070661_100206165 Ga0070661_1002061651 278
30 3300026116 Ga0207674_10029241 Ga0207674_100292415 278
31 3300041410 Ga0439461_0027734 Ga0439461_0027734_191_1129 278
32 3300042002 Ga0439442_026794 Ga0439442_026794_182_1120 278
33 3300042435 Ga0439434_0009858 Ga0439434_0009858_594_1532 278
34 3300042876 Ga0451577_0144884 Ga0451577_0144884_45_887 278
35 3300006846 Ga0075430_100045756 Ga0075430_1000457563 279
36 3300006847 Ga0075431_100098356 Ga0075431_1000983563 279
37 3300050509 nmdc:mga0qj67_24983_c1 nmdc:mga0qj67_24983_c1_312_1157 279
38 3300050510 nmdc:mga06r32_22126_c1 nmdc:mga06r32_22126_c1_2951_3796 279
39 3300014326 Ga0157380_10076263 Ga0157380_100762632 280
40 3300009036 Ga0105244_10000004 Ga0105244_10000004298 281
41 3300033180 Ga0307510_10021489 Ga0307510_100214893 281
42 3300053096 Ga0500641_0000331 Ga0500641_0000331_2911_3759 281
43 3300053096 Ga0500641_0031828 Ga0500641_0031828_391_1242 281
44 3300053118 Ga0500594_0014802 Ga0500594_0014802_228_1076 281
45 3300003322 rootL2_10164112 rootL2_101641122 282
46 3300003323 rootH1_10016395 rootH1_100163956 282
47 3300005471 Ga0070698_100060736 Ga0070698_1000607364 282
48 3300006195 Ga0075366_10014950 Ga0075366_100149504 282
49 3300030522 Ga0307512_10197311 Ga0307512_101973112 282
50 3300037312 Ga0395899_0102304 Ga0395899_0102304_235_1359 282
51 3300037418 Ga0395900_0000576 Ga0395900_0000576_26825_27850 282
52 3300037466 Ga0395898_0001619 Ga0395898_0001619_9004_10029 282
53 3300041507 Ga0451851_0868971 Ga0451851_0868971_15_878 282
54 3300041512 Ga0451853_1852126 Ga0451853_1852126_759_1622 282
55 3300044712 Ga0453684_0245288 Ga0453684_0245288_151_1011 282
56 3300049569 Ga0501032_0048696 Ga0501032_0048696_1259_2392 282
57 3300049570 Ga0501033_0042003 Ga0501033_0042003_2156_3289 282
58 3300049571 Ga0501034_0038904 Ga0501034_0038904_656_1789 282
59 3300049574 Ga0501038_0029416 Ga0501038_0029416_2400_3533 282
60 3300049575 Ga0501039_0103710 Ga0501039_0103710_55_1188 282
61 3300049586 Ga0501070_0044430 Ga0501070_0044430_1817_2950 282
62 3300049686 Ga0501257_014669 Ga0501257_014669_280_1143 282
63 3300049705 Ga0501225_0019242 Ga0501225_0019242_197_1060 282
64 3300049822 Ga0501035_0048373 Ga0501035_0048373_2400_3533 282
65 3300049823 Ga0501044_0014107 Ga0501044_0014107_4673_5806 282
66 3300050493 nmdc:mga0k408_38796_c1 nmdc:mga0k408_38796_c1_726_1589 282
67 3300050507 nmdc:mga05p37_1492_c2 nmdc:mga05p37_1492_c2_15028_15891 282
68 3300053088 Ga0500644_0095169 Ga0500644_0095169_157_1020 282
69 3300053090 Ga0500646_0020532 Ga0500646_0020532_32_895 282
70 3300053092 Ga0500583_0000028 Ga0500583_0000028_59802_60665 282
71 3300053092 Ga0500583_0002529 Ga0500583_0002529_4528_5391 282
72 3300053147 Ga0500589_000339 Ga0500589_000339_2807_3670 282
73 3300053156 Ga0500622_0114009 Ga0500622_0114009_48_911 282
74 3300053727 Ga0500611_019849 Ga0500611_019849_101_964 282
75 iso_pu_bacteria 2738541278 2738724322 282
76 iso_pu_bacteria 2839989709 2839990613 282
77 3300005834 Ga0068851_10002749 Ga0068851_100027497 283
78 3300006237 Ga0097621_100148952 Ga0097621_1001489522 283
79 3300009177 Ga0105248_10005403 Ga0105248_100054036 283
80 3300037418 Ga0395900_0003321 Ga0395900_0003321_8015_9127 283
81 3300005328 Ga0070676_10048406 Ga0070676_100484062 284
82 3300005337 Ga0070682_100076470 Ga0070682_1000764702 284
83 3300005339 Ga0070660_100000895 Ga0070660_1000008953 284
84 3300005344 Ga0070661_100071288 Ga0070661_1000712882 284
85 3300005353 Ga0070669_100313433 Ga0070669_1003134332 284
86 3300005355 Ga0070671_100032005 Ga0070671_1000320054 284
87 3300005356 Ga0070674_100014727 Ga0070674_1000147274 284
88 3300005364 Ga0070673_100054324 Ga0070673_1000543242 284
89 3300005365 Ga0070688_100371518 Ga0070688_1003715181 284
90 3300005366 Ga0070659_100001369 Ga0070659_1000013699 284
91 3300005456 Ga0070678_100362877 Ga0070678_1003628772 284
92 3300005543 Ga0070672_100050528 Ga0070672_1000505282 284
93 3300005544 Ga0070686_100008416 Ga0070686_1000084162 284
94 3300005564 Ga0070664_100002673 Ga0070664_1000026735 284
95 3300005564 Ga0070664_100008683 Ga0070664_1000086834 284
96 3300005615 Ga0070702_100056760 Ga0070702_1000567602 284
97 3300005618 Ga0068864_100068199 Ga0068864_1000681994 284
98 3300005719 Ga0068861_100353349 Ga0068861_1003533491 284
99 3300005842 Ga0068858_100062648 Ga0068858_1000626482 284
100 3300006237 Ga0097621_100081959 Ga0097621_1000819592 284
101 3300010375 Ga0105239_10248044 Ga0105239_102480441 284
102 3300013306 Ga0163162_10390247 Ga0163162_103902471 284
103 3300017792 Ga0163161_10064641 Ga0163161_100646413 284
104 3300025901 Ga0207688_10073744 Ga0207688_100737441 284
105 3300025907 Ga0207645_10028483 Ga0207645_100284834 284
106 3300025918 Ga0207662_10017107 Ga0207662_100171072 284
107 3300025920 Ga0207649_10073679 Ga0207649_100736792 284
108 3300025923 Ga0207681_10325834 Ga0207681_103258341 284
109 3300025926 Ga0207659_10379755 Ga0207659_103797551 284
110 3300025932 Ga0207690_10001403 Ga0207690_100014036 284
111 3300025937 Ga0207669_10013111 Ga0207669_100131113 284
112 3300025937 Ga0207669_10192406 Ga0207669_101924061 284
113 3300025940 Ga0207691_10087635 Ga0207691_100876351 284
114 3300025945 Ga0207679_10204250 Ga0207679_102042502 284
115 3300026023 Ga0207677_10024266 Ga0207677_100242662 284
116 3300026078 Ga0207702_10658458 Ga0207702_106584581 284
117 3300026095 Ga0207676_10204587 Ga0207676_102045872 284
118 3300026121 Ga0207683_10084390 Ga0207683_100843902 284
119 3300037312 Ga0395899_0001678 Ga0395899_0001678_14892_15767 284
120 3300037418 Ga0395900_0022496 Ga0395900_0022496_887_1762 284
121 3300048915 Ga0496112_0360793 Ga0496112_0360793_16_879 284
122 3300048917 Ga0496114_0001887 Ga0496114_0001887_12256_13110 284
123 3300049581 Ga0501047_0183068 Ga0501047_0183068_806_1720 284
124 3300050493 nmdc:mga0k408_620_c1 nmdc:mga0k408_620_c1_2204_3064 284
125 3300050511 nmdc:mga08y16_64627_c1 nmdc:mga08y16_64627_c1_2267_3133 284
126 3300059508 Ga0587088_002607 Ga0587088_002607_71_931 284
127 3300059511 Ga0587091_001658 Ga0587091_001658_1399_2259 284
128 3300059639 Ga0587062_001253 Ga0587062_001253_123_983 284
129 3300059645 Ga0587076_001758 Ga0587076_001758_284_1144 284
130 3300060346 Ga0587111_0011501 Ga0587111_0011501_350_1225 284
131 iso_pu_bacteria 2554235227 2555230450 284
132 iso_pu_bacteria 2654587600 2655034034 284
133 3300003187 JGI25151J46595_10000065 JGI25151J46595_1000006518 285
134 3300003187 JGI25151J46595_10003848 JGI25151J46595_100038486 285
135 3300003771 Ga0055526_1020101 Ga0055526_10201013 285
136 3300003773 Ga0055537_1000996 Ga0055537_10009965 285
137 3300003781 Ga0055536_1000026 Ga0055536_100002677 285
138 3300003784 Ga0055534_1000093 Ga0055534_100009355 285
139 3300003784 Ga0055534_1000523 Ga0055534_10005234 285
140 3300005985 Ga0081539_10000844 Ga0081539_100008444 285
141 3300006844 Ga0075428_100437811 Ga0075428_1004378111 285
142 3300006844 Ga0075428_100523421 Ga0075428_1005234212 285
143 3300006847 Ga0075431_100300214 Ga0075431_1003002142 285
144 3300006847 Ga0075431_100504514 Ga0075431_1005045142 285
145 3300006871 Ga0075434_100449285 Ga0075434_1004492851 285
146 3300009094 Ga0111539_10159157 Ga0111539_101591573 285
147 3300009094 Ga0111539_10262671 Ga0111539_102626712 285
148 3300009098 Ga0105245_10263819 Ga0105245_102638192 285
149 3300009147 Ga0114129_10263424 Ga0114129_102634244 285
150 3300009147 Ga0114129_10379585 Ga0114129_103795852 285
151 3300012491 Ga0157329_1000035 Ga0157329_10000352 285
152 3300012513 Ga0157326_1001066 Ga0157326_10010662 285
153 3300013104 Ga0157370_10537408 Ga0157370_105374081 285
154 3300013307 Ga0157372_10396411 Ga0157372_103964111 285
155 3300014969 Ga0157376_10401495 Ga0157376_104014953 285
156 3300025263 Ga0209565_1000145 Ga0209565_100014518 285
157 3300025291 Ga0209675_1000026 Ga0209675_1000026124 285
158 3300025291 Ga0209675_1000139 Ga0209675_100013970 285
159 3300025292 Ga0209676_1000059 Ga0209676_1000059181 285
160 3300025294 Ga0209025_1000066 Ga0209025_1000066148 285
161 3300025294 Ga0209025_1000159 Ga0209025_100015926 285
162 3300025295 Ga0209564_1000161 Ga0209564_1000161117 285
163 3300025295 Ga0209564_1000851 Ga0209564_100085120 285
164 3300025299 Ga0209256_1001729 Ga0209256_10017293 285
165 3300025927 Ga0207687_10175907 Ga0207687_101759072 285
166 3300027907 Ga0207428_10071720 Ga0207428_100717201 285
167 3300027907 Ga0207428_10110182 Ga0207428_101101822 285
168 3300035691 Ga0373931_0024532 Ga0373931_0024532_209_1072 285
169 3300037418 Ga0395900_0006370 Ga0395900_0006370_2512_3381 285
170 3300037418 Ga0395900_0065291 Ga0395900_0065291_747_1637 285
171 3300037466 Ga0395898_0005643 Ga0395898_0005643_9358_10227 285
172 3300037471 Ga0395905_0003144 Ga0395905_0003144_2313_3230 285
173 3300038443 Ga0395901_0018284 Ga0395901_0018284_4338_5207 285
174 3300038443 Ga0395901_0159807 Ga0395901_0159807_1055_1924 285
175 3300042876 Ga0451577_0030109 Ga0451577_0030109_3015_3881 285
176 3300044901 Ga0466960_0017279 Ga0466960_0017279_407_1276 285
177 3300045051 Ga0451576_0214717 Ga0451576_0214717_405_1262 285
178 3300046453 Ga0495627_001668 Ga0495627_001668_6714_7571 285
179 3300048912 Ga0496109_0503188 Ga0496109_0503188_55_912 285
180 3300048917 Ga0496114_0215032 Ga0496114_0215032_80_937 285
181 3300049568 Ga0501031_0008273 Ga0501031_0008273_2816_3676 285
182 3300049569 Ga0501032_0005072 Ga0501032_0005072_8730_9590 285
183 3300049569 Ga0501032_0023854 Ga0501032_0023854_2570_3430 285
184 3300049570 Ga0501033_0002795 Ga0501033_0002795_6275_7135 285
185 3300049570 Ga0501033_0032515 Ga0501033_0032515_2507_3367 285
186 3300049571 Ga0501034_0016840 Ga0501034_0016840_252_1112 285
187 3300049572 Ga0501036_0020674 Ga0501036_0020674_4208_5068 285
188 3300049572 Ga0501036_0021892 Ga0501036_0021892_2661_3521 285
189 3300049572 Ga0501036_0033289 Ga0501036_0033289_1425_2285 285
190 3300049573 Ga0501037_0090462 Ga0501037_0090462_1020_1880 285
191 3300049573 Ga0501037_0101683 Ga0501037_0101683_1122_1982 285
192 3300049573 Ga0501037_0131223 Ga0501037_0131223_742_1602 285
193 3300049574 Ga0501038_0011445 Ga0501038_0011445_4087_4947 285
194 3300049574 Ga0501038_0019597 Ga0501038_0019597_3983_4840 285
195 3300049574 Ga0501038_0031410 Ga0501038_0031410_1866_2726 285
196 3300049576 Ga0501040_0010779 Ga0501040_0010779_1946_2806 285
197 3300049578 Ga0501042_0000976 Ga0501042_0000976_7633_8493 285
198 3300049579 Ga0501043_0013611 Ga0501043_0013611_3157_4017 285
199 3300049579 Ga0501043_0059746 Ga0501043_0059746_641_1501 285
200 3300049580 Ga0501046_0006526 Ga0501046_0006526_1945_2805 285
201 3300049581 Ga0501047_0037356 Ga0501047_0037356_1925_2785 285
202 3300049582 Ga0501048_0068385 Ga0501048_0068385_215_1075 285
203 3300049584 Ga0501068_0001292 Ga0501068_0001292_1297_2157 285
204 3300049822 Ga0501035_0000426 Ga0501035_0000426_2682_3542 285
205 3300049822 Ga0501035_0052115 Ga0501035_0052115_870_1730 285
206 3300049822 Ga0501035_0068571 Ga0501035_0068571_795_1655 285
207 3300049823 Ga0501044_0005736 Ga0501044_0005736_9407_10267 285
208 3300049824 Ga0501045_0020523 Ga0501045_0020523_693_1553 285
209 3300050507 nmdc:mga05p37_120275_c1 nmdc:mga05p37_120275_c1_651_1517 285
210 3300050507 nmdc:mga05p37_26521_c1 nmdc:mga05p37_26521_c1_4541_5431 285
211 3300050507 nmdc:mga05p37_4339_c1 nmdc:mga05p37_4339_c1_2784_3650 285
212 3300050508 nmdc:mga09592_3594_c1 nmdc:mga09592_3594_c1_6648_7538 285
213 3300050510 nmdc:mga06r32_62248_c1 nmdc:mga06r32_62248_c1_1866_2756 285
214 3300050511 nmdc:mga08y16_127074_c1 nmdc:mga08y16_127074_c1_824_1690 285
215 3300050512 nmdc:mga0n895_434180_c1 nmdc:mga0n895_434180_c1_119_985 285
216 3300050515 nmdc:mga0a205_6173_c1 nmdc:mga0a205_6173_c1_4118_4984 285

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

99

293

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

105

338

0.96

PF08659

KR

KR domain

100

269

0.88

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

101

254

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i3o-assembly1.cif.gz_A 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9856 6 284
3i3o-assembly2.cif.gz_H 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9829 11 284
3i3o-assembly2.cif.gz_G 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9819 26 284
3i3o-assembly2.cif.gz_H 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9793 11 284
3r3s-assembly1.cif.gz_D structure of the ygha oxidoreductase from salmonella enterica 0.9735 6 283
ID Description Score Start End Superfamily
af_K7KGR3_30_220_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9876 104 283 3.40.50.720
3i3oG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9819 26 284 3.40.50.720
af_Q75KH3_1_297_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9803 6 281 3.40.50.720
3r3sA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9768 6 283 3.40.50.720
3i3oG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.97 26 284 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6J4KT55-F1-model_v4 Oxidoreductase, short-chain dehydrogenase/reductase family 0.9958 147 283 GO:0016614
AF-A0A354DGU7-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9922 176 284 GO:0016614
AF-A0A4Q5VLK3-F1-model_v4 deleted 0.9912 123 283
AF-A0A2W6NLK6-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9881 6 284 GO:0016614
AF-A0A4R6LGU1-F1-model_v4 NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 0.9857 4 283 GO:0016614

Feature Viewer

pLDDT pTM Quality
93.69 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map