F326821

General Info

Members Datasets Scaffolds Average Seq Length
215 184 430 329

Family's Representative Sequence

Representative Sequence 3300046535|Ga0495586_0011052|Ga0495586_0011052_3063_4058
Length 331
Sequence MADSFTAVVIEDEAGKARTSFKKLTVADLPDHEVLVEVEFSTLNYKDGLVLSGNRNKVARKLPMVAGIDLAGTVVESRSPAWRTGDKVVVNGFGLSETHYGGYARYARVKPEWLVRLPSVFSPEQAMAIGTAGYTAALCVDALVDFGLTKDAGEVLVTGAAGGVGSFAVALLAAAGFDVVASTGRPEAYDYLKALGARSFVDRASLQEKGPPLQKERWAGAVDVVGGATLANVLAQTKYGRSVAACGLTASADLPATVLPHILRSVALLGVDSVMAPLVKRERAWQRLARDLPAKKLTDMTRVEPMSKLVELAAAILAGQVRGRVVIDVKR

Samples

Sample ID Description Type Environment
1 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
33 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
35 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
36 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
37 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
38 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
40 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
42 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
55 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
66 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
67 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
68 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
69 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
70 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
71 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
72 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
73 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
74 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
75 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
76 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
77 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
78 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
79 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
80 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
81 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
82 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
83 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
84 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
85 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
86 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
87 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
88 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
89 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
90 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
91 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
92 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
93 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
94 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
99 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
100 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
101 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
102 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
103 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
104 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
105 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
106 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
107 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
108 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
109 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
110 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
111 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
112 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
113 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
114 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
115 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
116 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
117 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
118 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
119 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
120 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
121 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
122 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
123 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
124 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
125 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
126 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
127 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
128 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
129 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
130 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
131 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
132 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
133 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
134 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
135 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
136 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
137 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
138 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
139 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
140 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
141 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
142 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
143 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
144 2643221558 Rhizobium sp. Root149 Isolate Unclassified
145 2643221607 Rhizobium sp. Root73 Isolate Unclassified
146 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
147 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
148 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
149 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
150 2738543024 Aminobacter sp. AP02 Isolate Unclassified
151 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
152 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
153 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
154 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
155 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
156 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
157 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
158 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
159 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
160 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
161 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
162 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
163 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
164 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
165 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
166 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
167 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
168 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
169 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
170 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
171 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
172 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
173 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
174 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
175 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
176 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
177 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
178 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
179 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
180 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
181 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
182 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
183 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
184 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 65.58
Metatranscriptomes 0
Isolates 34.42

Biome Distribution

Category Percentage (%)
Aerial Root 0.47
Bulb 0
Endosphere 25.12
Nodule 10.23
Rhizoplane 1.86
Rhizosphere 33.95
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495586_0011052 3300046535 Bacteria 4796
2 JGI24740J21852_10000003 3300001979 Bacteria 127453
3 JGI25162J39368_1000102 3300002737 Bacteria 94155
4 JGI25152J39213_1000315 3300002773 Bacteria 31149
5 JGI25152J39213_1001041 3300002773 Bacteria 13208
6 JGI25165J46597_1000612 3300003214 Bacteria 30341
7 JGI25153J46596_10000363 3300003215 Bacteria 31149
8 JGI25153J46596_10000727 3300003215 Bacteria 20185
9 rootL2_10049866 3300003322 Bacteria 4052
10 rootH1_10075418 3300003323 Bacteria 2643
11 rootH1_10115897 3300003323 Bacteria 2031
12 Ga0055524_1002422 3300003775 Bacteria 9622
13 Ga0055528_1005580 3300003790 Bacteria 5823
14 Ga0055531_10009776 3300003794 Bacteria 4863
15 Ga0068869_100177567 3300005334 Bacteria 1668
16 Ga0068868_100099259 3300005338 Bacteria 2355
17 Ga0070675_100211576 3300005354 Bacteria 1685
18 Ga0070671_100108381 3300005355 Bacteria 2332
19 Ga0070673_100267097 3300005364 Bacteria 1496
20 Ga0070665_100034122 3300005548 Bacteria 5117
21 Ga0068856_100003834 3300005614 Bacteria 15083
22 Ga0068852_100315461 3300005616 Bacteria 1517
23 Ga0075364_10000011 3300006051 Bacteria 62606
24 Ga0075364_10020039 3300006051 Bacteria 4205
25 Ga0075367_10150276 3300006178 Bacteria 1445
26 Ga0075370_10012408 3300006353 Bacteria 4501
27 Ga0068865_100074954 3300006881 Bacteria 2411
28 Ga0079104_1000015 3300006946 Bacteria 321803
29 Ga0105240_10004789 3300009093 Bacteria 20409
30 Ga0111539_10168560 3300009094 Bacteria 2559
31 Ga0105237_10019783 3300009545 Bacteria 6951
32 Ga0105239_10047879 3300010375 Bacteria 4686
33 Ga0105246_10027626 3300011119 Bacteria 3720
34 Ga0157373_10077635 3300013100 Bacteria 2343
35 Ga0157370_10062282 3300013104 Bacteria 3538
36 Ga0182008_10089181 3300014497 Bacteria 1520
37 Ga0209563_106454 3300025230 Bacteria 2011
38 Ga0209437_100022 3300025233 Bacteria 625694
39 Ga0207425_1003611 3300025245 Bacteria 4888
40 Ga0207425_1011947 3300025245 Bacteria 2053
41 Ga0209129_1000249 3300025258 Bacteria 56453
42 Ga0209129_1000347 3300025258 Bacteria 39276
43 Ga0209129_1000426 3300025258 Bacteria 31943
44 Ga0209233_1000031 3300025261 Bacteria 624646
45 Ga0209673_1000055 3300025273 Bacteria 272768
46 Ga0209673_1001566 3300025273 Bacteria 20457
47 Ga0209025_1000925 3300025294 Bacteria 44920
48 Ga0209025_1001108 3300025294 Bacteria 38669
49 Ga0209025_1015647 3300025294 Bacteria 4552
50 Ga0209564_1015353 3300025295 Bacteria 3121
51 Ga0209758_1000875 3300025297 Bacteria 41411
52 Ga0209758_1001250 3300025297 Bacteria 31516
53 Ga0209758_1002248 3300025297 Bacteria 20044
54 Ga0209050_1014386 3300025298 Bacteria 3411
55 Ga0209256_1001011 3300025299 Bacteria 33240
56 Ga0209256_1002301 3300025299 Bacteria 16019
57 Ga0209051_1071580 3300025303 Bacteria 1041
58 Ga0207645_10006472 3300025907 Bacteria 8401
59 Ga0207695_10001319 3300025913 Bacteria 42054
60 Ga0207671_10000148 3300025914 Bacteria 108473
61 Ga0207644_10134314 3300025931 Bacteria 1898
62 Ga0207689_10195556 3300025942 Bacteria 1669
63 Ga0207702_10017314 3300026078 Bacteria 5962
64 Ga0207648_10008528 3300026089 Bacteria 9919
65 Ga0207674_10080417 3300026116 Bacteria 3262
66 Ga0207698_10081555 3300026142 Bacteria 2612
67 Ga0209281_1000068 3300027111 Bacteria 280238
68 Ga0209371_1000282 3300027312 Bacteria 58487
69 Ga0268266_10445340 3300028379 Bacteria 1230
70 Ga0307515_10000136 3300028794 Bacteria 174265
71 Ga0307515_10001888 3300028794 Bacteria 46615
72 Ga0268256_1000529 3300030500 Bacteria 31787
73 Ga0307513_10000302 3300031456 Bacteria 70793
74 Ga0373931_0043193 3300035691 Bacteria 2373
75 Ga0395899_0000484 3300037312 Bacteria 44591
76 Ga0395900_0000067 3300037418 Bacteria 193958
77 Ga0395898_0000992 3300037466 Bacteria 44640
78 Ga0395905_0000060 3300037471 Bacteria 193958
79 Ga0395901_0000142 3300038443 Bacteria 92246
80 Ga0395901_0256197 3300038443 Bacteria 1822
81 Ga0439436_0002123 3300041404 Bacteria 5919
82 Ga0451833_0046118 3300041491 Bacteria 2458
83 Ga0451833_0359263 3300041491 Bacteria 12327
84 Ga0451835_0189864 3300041492 Bacteria 12020
85 Ga0451837_1850158 3300041494 Bacteria 3124
86 Ga0451839_0216960 3300041496 Bacteria 12076
87 Ga0451841_0134980 3300041498 Bacteria 15751
88 Ga0451845_0052279 3300041501 Bacteria 15166
89 Ga0451845_0496934 3300041501 Bacteria 2766
90 Ga0451847_0113513 3300041503 Bacteria 8805
91 Ga0451849_0001394 3300041505 Bacteria 10159
92 Ga0451849_0056668 3300041505 Bacteria 13098
93 Ga0451851_0117968 3300041507 Bacteria 3220
94 Ga0451851_0282124 3300041507 Bacteria 14325
95 Ga0451843_0078489 3300041509 Bacteria 17385
96 Ga0451843_1319445 3300041509 Bacteria 5520
97 Ga0451853_1620659 3300041512 Bacteria 10662
98 Ga0450920_031006 3300042122 Bacteria 1053
99 Ga0450923_033155 3300042125 Bacteria 1061
100 Ga0495638_0000093 3300046460 Bacteria 142356
101 Ga0495654_0001062 3300046530 Bacteria 20101
102 Ga0495654_0047595 3300046530 Bacteria 2107
103 Ga0495609_0007011 3300046538 Bacteria 5679
104 Ga0495668_0014142 3300046616 Bacteria 4689
105 Ga0495625_0039178 3300046660 Bacteria 3463
106 Ga0495625_0078685 3300046660 Bacteria 2301
107 Ga0495588_0041250 3300046674 Bacteria 2356
108 Ga0495670_0100640 3300046691 Bacteria 1488
109 Ga0495636_0086570 3300047318 Bacteria 1355
110 Ga0495686_0159956 3300047472 Bacteria 1317
111 Ga0496106_0184105 3300048909 Bacteria 1659
112 Ga0496119_0004658 3300048922 Bacteria 13525
113 Ga0496121_0000426 3300048924 Bacteria 82870
114 Ga0496121_0007939 3300048924 Bacteria 12683
115 Ga0496122_0062371 3300048925 Bacteria 2729
116 Ga0496123_0007424 3300048926 Bacteria 10332
117 Ga0496124_0095759 3300048927 Bacteria 2412
118 Ga0496126_0335427 3300048929 Bacteria 1240
119 Ga0501033_0000186 3300049570 Bacteria 59624
120 Ga0501037_0044459 3300049573 Bacteria 3262
121 Ga0501035_0009771 3300049822 Bacteria 8914
122 nmdc:mga00v17_11083_c1 3300050491 Bacteria 4945
123 nmdc:mga00v17_71_c1 3300050491 Bacteria 60964
124 Ga0500610_0045299 3300053079 Bacteria 2283
125 Ga0500578_0122003 3300053086 Bacteria 1638
126 Ga0500560_006724 3300053107 Bacteria 2657
127 Ga0500569_013085 3300053109 Bacteria 2022
128 Ga0500607_017590 3300053121 Bacteria 4076
129 Ga0500608_009631 3300053122 Bacteria 4111
130 Ga0500618_000157 3300053125 Bacteria 56116
131 Ga0500618_000631 3300053125 Bacteria 21288
132 Ga0500568_0000096 3300053139 Bacteria 82567
133 Ga0500568_0000137 3300053139 Bacteria 65882
134 Ga0500573_0007517 3300053140 Bacteria 5947
135 Ga0500573_0023497 3300053140 Bacteria 3541
136 Ga0500616_0000164 3300053153 Bacteria 110715
137 Ga0500616_0000379 3300053153 Bacteria 62396
138 Ga0500622_0080560 3300053156 Bacteria 1631
139 Ga0500627_0030666 3300053158 Bacteria 2253
140 Ga0500627_0049415 3300053158 Bacteria 1830
141 Ga0500634_0013164 3300053161 Bacteria 4331
142 2510893162 2510461076 Bacteria 8618824
143 2511131391 2510917022 Bacteria 6504556
144 2511171684 2510917026 Bacteria 7046020
145 2513630950 2513237093 Bacteria 7545552
146 2513711130 2513237103 Bacteria 7647401
147 2513868155 2513237138 Bacteria 7368160
148 2513998406 2513237159 Bacteria 6810126
149 2515612992 2515154107 Bacteria 6795637
150 2515639060 2515154113 Bacteria 7807172
151 2515644061 2515154114 Bacteria 7848616
152 2523102384 2522572158 Bacteria 6514390
153 2535520791 2534681796 Bacteria 7146037
154 2585166600 2582581283 Bacteria 6030556
155 2585267062 2582581306 Bacteria 6450535
156 2585274967 2582581307 Bacteria 6597605
157 2585283725 2582581308 Bacteria 7413247
158 2585388103 2582581865 Bacteria 6644329
159 2585396542 2582581866 Bacteria 6859583
160 2585536261 2585427527 Bacteria 7273426
161 2585557494 2585427530 Bacteria 7383882
162 2585561319 2585427531 Bacteria 6992870
163 2585899284 2585427608 Bacteria 6544331
164 2585908086 2585427609 Bacteria 6667127
165 2585997415 2585427633 Bacteria 6413184
166 2586002020 2585427634 Bacteria 6455027
167 2587983879 2585428125 Bacteria 6662905
168 2599100404 2597490356 Bacteria 7030811
169 2599102421 2597490356 Bacteria 7030811
170 2599332067 2599185156 Bacteria 5403036
171 2600373803 2600254933 Bacteria 4750527
172 2616312412 2615840626 Bacteria 7921970
173 2616555451 2615840698 Bacteria 7319877
174 2643814574 2643221558 Bacteria 5460675
175 2644052345 2643221607 Bacteria 6314006
176 2644201272 2643221636 Bacteria 6583769
177 2644484623 2643221686 Bacteria 6310811
178 2644499411 2643221689 Bacteria 6042950
179 2671113233 2667528174 Bacteria 6435400
180 2739305621 2738543024 Bacteria 5603683
181 2776914947 2775507049 Bacteria 6284736
182 2819607914 2818991448 Bacteria 6772224
183 2819642070 2818991453 Bacteria 7181617
184 2821125885 2821123053 Bacteria 7836056
185 2834580794 2834578030 Bacteria 3530182
186 2838737640 2838736955 Bacteria 5760694
187 2841841991 2841840854 Bacteria 5761912
188 2842141770 2842140634 Bacteria 5759631
189 2842221635 2842217011 Bacteria 7497767
190 2842334293 2842333319 Bacteria 8899485
191 2842524566 2842521101 Bacteria 6569494
192 2842924420 2842922631 Bacteria 5824079
193 2846954499 2846952575 Bacteria 6587527
194 2848859239 2848858292 Bacteria 7391279
195 2848864046 2848858292 Bacteria 7391279
196 2854921329 2854916844 Bacteria 5725939
197 2857532446 2857531043 Bacteria 6754041
198 2891051601 2891048133 Bacteria 4447501
199 2897808984 2897803580 Bacteria 7000062
200 2899808752 2899803654 Bacteria 5577784
201 2919173710 2919171160 Bacteria 6499771
202 2919413001 2919408235 Bacteria 6149349
203 2923560488 2923556063 Bacteria 6793593
204 2978971784 2978969890 Bacteria 5400756
205 2984588906 2984587000 Bacteria 5263363
206 2995393129 2995392953 Bacteria 4539380
207 2996315913 2996310559 Bacteria 6357320
208 3005409778 3005409236 Bacteria 7188837
209 3005450619 3005445848 Bacteria 6906074
210 639644949 639633055 Bacteria 7751309
211 8002289582 8002285264 Bacteria 6717907
212 8005546936 8005542996 Bacteria 7077758
213 8005650512 8005645114 Bacteria 6950293
214 8005686736 8005682033 Bacteria 6726518
215 8018154819 8018150411 Bacteria 5549903
216 Ga0495586_0011052
217 JGI24740J21852_10000003
218 JGI25162J39368_1000102
219 JGI25152J39213_1000315
220 JGI25152J39213_1001041
221 JGI25165J46597_1000612
222 JGI25153J46596_10000363
223 JGI25153J46596_10000727
224 rootL2_10049866
225 rootH1_10075418
226 rootH1_10115897
227 Ga0055524_1002422
228 Ga0055528_1005580
229 Ga0055531_10009776
230 Ga0068869_100177567
231 Ga0068868_100099259
232 Ga0070675_100211576
233 Ga0070671_100108381
234 Ga0070673_100267097
235 Ga0070665_100034122
236 Ga0068856_100003834
237 Ga0068852_100315461
238 Ga0075364_10000011
239 Ga0075364_10020039
240 Ga0075367_10150276
241 Ga0075370_10012408
242 Ga0068865_100074954
243 Ga0079104_1000015
244 Ga0105240_10004789
245 Ga0111539_10168560
246 Ga0105237_10019783
247 Ga0105239_10047879
248 Ga0105246_10027626
249 Ga0157373_10077635
250 Ga0157370_10062282
251 Ga0182008_10089181
252 Ga0209563_106454
253 Ga0209437_100022
254 Ga0207425_1003611
255 Ga0207425_1011947
256 Ga0209129_1000249
257 Ga0209129_1000347
258 Ga0209129_1000426
259 Ga0209233_1000031
260 Ga0209673_1000055
261 Ga0209673_1001566
262 Ga0209025_1000925
263 Ga0209025_1001108
264 Ga0209025_1015647
265 Ga0209564_1015353
266 Ga0209758_1000875
267 Ga0209758_1001250
268 Ga0209758_1002248
269 Ga0209050_1014386
270 Ga0209256_1001011
271 Ga0209256_1002301
272 Ga0209051_1071580
273 Ga0207645_10006472
274 Ga0207695_10001319
275 Ga0207671_10000148
276 Ga0207644_10134314
277 Ga0207689_10195556
278 Ga0207702_10017314
279 Ga0207648_10008528
280 Ga0207674_10080417
281 Ga0207698_10081555
282 Ga0209281_1000068
283 Ga0209371_1000282
284 Ga0268266_10445340
285 Ga0307515_10000136
286 Ga0307515_10001888
287 Ga0268256_1000529
288 Ga0307513_10000302
289 Ga0373931_0043193
290 Ga0395899_0000484
291 Ga0395900_0000067
292 Ga0395898_0000992
293 Ga0395905_0000060
294 Ga0395901_0000142
295 Ga0395901_0256197
296 Ga0439436_0002123
297 Ga0451833_0046118
298 Ga0451833_0359263
299 Ga0451835_0189864
300 Ga0451837_1850158
301 Ga0451839_0216960
302 Ga0451841_0134980
303 Ga0451845_0052279
304 Ga0451845_0496934
305 Ga0451847_0113513
306 Ga0451849_0001394
307 Ga0451849_0056668
308 Ga0451851_0117968
309 Ga0451851_0282124
310 Ga0451843_0078489
311 Ga0451843_1319445
312 Ga0451853_1620659
313 Ga0450920_031006
314 Ga0450923_033155
315 Ga0495638_0000093
316 Ga0495654_0001062
317 Ga0495654_0047595
318 Ga0495609_0007011
319 Ga0495668_0014142
320 Ga0495625_0039178
321 Ga0495625_0078685
322 Ga0495588_0041250
323 Ga0495670_0100640
324 Ga0495636_0086570
325 Ga0495686_0159956
326 Ga0496106_0184105
327 Ga0496119_0004658
328 Ga0496121_0000426
329 Ga0496121_0007939
330 Ga0496122_0062371
331 Ga0496123_0007424
332 Ga0496124_0095759
333 Ga0496126_0335427
334 Ga0501033_0000186
335 Ga0501037_0044459
336 Ga0501035_0009771
337 nmdc:mga00v17_11083_c1
338 nmdc:mga00v17_71_c1
339 Ga0500610_0045299
340 Ga0500578_0122003
341 Ga0500560_006724
342 Ga0500569_013085
343 Ga0500607_017590
344 Ga0500608_009631
345 Ga0500618_000157
346 Ga0500618_000631
347 Ga0500568_0000096
348 Ga0500568_0000137
349 Ga0500573_0007517
350 Ga0500573_0023497
351 Ga0500616_0000164
352 Ga0500616_0000379
353 Ga0500622_0080560
354 Ga0500627_0030666
355 Ga0500627_0049415
356 Ga0500634_0013164
357 2510893162
358 2511131391
359 2511171684
360 2513630950
361 2513711130
362 2513868155
363 2513998406
364 2515612992
365 2515639060
366 2515644061
367 2523102384
368 2535520791
369 2585166600
370 2585267062
371 2585274967
372 2585283725
373 2585388103
374 2585396542
375 2585536261
376 2585557494
377 2585561319
378 2585899284
379 2585908086
380 2585997415
381 2586002020
382 2587983879
383 2599100404
384 2599102421
385 2599332067
386 2600373803
387 2616312412
388 2616555451
389 2643814574
390 2644052345
391 2644201272
392 2644484623
393 2644499411
394 2671113233
395 2739305621
396 2776914947
397 2819607914
398 2819642070
399 2821125885
400 2834580794
401 2838737640
402 2841841991
403 2842141770
404 2842221635
405 2842334293
406 2842524566
407 2842924420
408 2846954499
409 2848859239
410 2848864046
411 2854921329
412 2857532446
413 2891051601
414 2897808984
415 2899808752
416 2919173710
417 2919413001
418 2923560488
419 2978971784
420 2984588906
421 2995393129
422 2996315913
423 3005409778
424 3005450619
425 639644949
426 8002289582
427 8005546936
428 8005650512
429 8005686736
430 8018154819

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

163

290

0.92

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

30

119

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nx4-assembly1.cif.gz_B crystal structure of the yhdh oxidoreductase from salmonella enterica in complex with nadp 0.9738 6 330
3nx4-assembly1.cif.gz_B crystal structure of the yhdh oxidoreductase from salmonella enterica in complex with nadp 0.9679 6 330
1o8c-assembly1.cif.gz_D crystal structure of e. coli k-12 yhdh with bound nadph 0.9628 6 330
5gxf-assembly1.cif.gz_B acryloyl-coa reductase acui from ruegeria pomeroyi dss-3 0.9576 5 329
1o8c-assembly1.cif.gz_D crystal structure of e. coli k-12 yhdh with bound nadph 0.957 6 330
ID Description Score Start End Superfamily
af_P26646_2_123_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9693 6 126 3.90.180.10
af_P26646_4_324_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9687 9 330 2.40.50.140
af_P26646_4_324_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9628 9 330 2.40.50.140
af_Q2FVQ0_2_295_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.958 36 328 3.90.180.10
af_P26646_2_123_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9539 6 126 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A7X0FE54-F1-model_v4 Putative YhdH/YhfP family quinone oxidoreductase 0.9843 1 330 GO:0043957
AF-A0A7X0FE54-F1-model_v4 Putative YhdH/YhfP family quinone oxidoreductase 0.9813 1 330 GO:0043957
AF-W0DZS2-F1-model_v4 Alcohol dehydrogenase 0.981 1 330 GO:0043957
AF-A0A843SX44-F1-model_v4 Acryloyl-CoA reductase (EC 1.3.1.95) 0.9798 4 331 GO:0043957
AF-A0A8A7CS13-F1-model_v4 deleted 0.9796 1 329

Map