F326402

General Info

Members Datasets Scaffolds Average Seq Length
215 159 430 366

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10028758|Ga0105239_100287583
Length 390
Sequence MLRQRIGLSISQILHDKGSSMNVITRPPVLPVIYDPSFEVPDEDEAETRDELVKTLRSISETTFKDSGHATRSVHAKSHGLLRAELRVLDDLPPVLAQGIFAKPGSWPVVMRLSTVPGDILDDSISTPRGLAIKVIGVEGKRLQDSEDAVTQDFVLVNGPAFSAPGAKKFLAVLKLLAFTTDKAPGLKKALSAIFRGTERAIEAFGGKSGTLKALGGHPETHILGETFFSQVPILFGPYMAKVSIAPISVELKQLVNASLDVNDRPNGLREAVVNFFAATAGEWELRIQLCTDLNTMPVEDASVAWPEEQSPYIAVARITAKPQLAWSETRARAIDDSMSFSPWHGIAAHRPIGSVMRIRKVAYEMSANFRAMHNGRRIEEPRDLNDLPA

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
20 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
21 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
22 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
34 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
35 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
36 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
37 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
38 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
39 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
40 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
42 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
44 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
45 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
66 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
67 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
68 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
69 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
70 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
71 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
72 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
73 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
74 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
75 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
76 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
77 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
78 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
79 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
80 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
81 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
82 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
83 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
84 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
85 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
88 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
89 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
90 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
91 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
92 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
93 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
94 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
95 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
96 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
97 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
98 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
104 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
105 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
106 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
107 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
108 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
109 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
110 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
113 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
114 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
115 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
116 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
117 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
118 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
119 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
120 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
121 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
122 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
123 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
124 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
125 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
126 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
127 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
128 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
129 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
130 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
131 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
132 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
133 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
134 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
135 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
136 2734482264 Dyella sp. AD052 Isolate Unclassified
137 2738541300 Massilia sp. GV016 Isolate Unclassified
138 2738543009 Luteibacter sp. OK325 Isolate Unclassified
139 2738543012 Acidovorax sp. CF301 Isolate Unclassified
140 2738543018 Massilia sp. GV045 Isolate Unclassified
141 2738543030 Massilia sp. GV097 Isolate Unclassified
142 2816332133 Acidovorax radicis 2721A Isolate Unclassified
143 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
144 2842733646 Variovorax sp. R-72446 Isolate Unclassified
145 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
146 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
147 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
148 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
149 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
150 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
151 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
152 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
153 2879127579 Bradyrhizobium canariense UBMA052 Isolate Nodule
154 2879142872 Bradyrhizobium canariense UBMA061 Isolate Nodule
155 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
156 2919085039 Luteibacter sp. 1214 Isolate Unclassified
157 2919404418 Luteibacter sp. 3190 Isolate Unclassified
158 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
159 641522639 Methylobacterium sp. 4-46 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.26
Metatranscriptomes 0.47
Isolates 16.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.16
Nodule 4.19
Rhizoplane 1.86
Rhizosphere 61.4
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10028758 3300010375 Bacteria 6112
2 JGI24736J21556_1003543 3300001904 Bacteria 2704
3 JGI25153J46596_10004922 3300003215 Bacteria 7098
4 Ga0006562J51391_1039586 3300003578 Bacteria 6710
5 Ga0065165_1000186 3300005262 Bacteria 108712
6 Ga0070670_100065810 3300005331 Bacteria 3110
7 Ga0070666_10002585 3300005335 Bacteria 10939
8 Ga0070668_100001000 3300005347 Bacteria 19805
9 Ga0070668_100018133 3300005347 Bacteria 5281
10 Ga0070669_100075934 3300005353 Bacteria 2493
11 Ga0070667_100005637 3300005367 Bacteria 10456
12 Ga0070663_100015210 3300005455 Bacteria 4960
13 Ga0070685_10000149 3300005466 Bacteria 45785
14 Ga0068855_100203795 3300005563 Bacteria 2226
15 Ga0068852_100036214 3300005616 Bacteria 4127
16 Ga0068861_100000707 3300005719 Bacteria 19902
17 Ga0068863_100001504 3300005841 Bacteria 23073
18 Ga0068860_100008305 3300005843 Bacteria 10333
19 Ga0075367_10156536 3300006178 Bacteria 1416
20 Ga0075369_10058043 3300006186 Bacteria 1685
21 Ga0075366_10061597 3300006195 Bacteria 2230
22 Ga0099794_10000298 3300007265 Bacteria 17051
23 Ga0099795_10002579 3300007788 Bacteria 4297
24 Ga0105240_10002458 3300009093 Bacteria 29778
25 Ga0105247_10010160 3300009101 Bacteria 5702
26 Ga0105237_10007909 3300009545 Bacteria 11588
27 Ga0105238_10015291 3300009551 Bacteria 7773
28 Ga0105249_10026376 3300009553 Bacteria 5235
29 Ga0099796_10050255 3300010159 Bacteria 1444
30 Ga0105239_10144192 3300010375 Bacteria 2655
31 Ga0157370_10004700 3300013104 Bacteria 15568
32 Ga0157370_10016285 3300013104 Bacteria 7533
33 Ga0157369_10003879 3300013105 Bacteria 17742
34 Ga0157378_10429477 3300013297 Bacteria 1307
35 Ga0157372_10071370 3300013307 Bacteria 3911
36 Ga0182008_10041514 3300014497 Bacteria 2294
37 Ga0182006_1000077 3300015261 Bacteria 127377
38 Ga0182006_1000170 3300015261 Bacteria 68803
39 Ga0182007_10019851 3300015262 Bacteria 2409
40 Ga0182005_1000060 3300015265 Bacteria 98664
41 Ga0182005_1000829 3300015265 Bacteria 13879
42 Ga0182005_1005681 3300015265 Bacteria 3878
43 Ga0182005_1008831 3300015265 Bacteria 2958
44 Ga0163161_10007674 3300017792 Bacteria 7462
45 Ga0213873_10000314 3300021358 Bacteria 8243
46 Ga0213872_10025933 3300021361 Bacteria 2693
47 Ga0209674_102011 3300025226 Bacteria 4695
48 Ga0209437_103984 3300025233 Bacteria 2624
49 Ga0209148_1002015 3300025254 Bacteria 7953
50 Ga0209129_1003811 3300025258 Bacteria 6308
51 Ga0209758_1000193 3300025297 Bacteria 134744
52 Ga0209256_1003347 3300025299 Bacteria 11363
53 Ga0209051_1009114 3300025303 Bacteria 5152
54 Ga0207680_10029707 3300025903 Bacteria 3074
55 Ga0207647_10000006 3300025904 Bacteria 214791
56 Ga0207695_10000040 3300025913 Bacteria 452787
57 Ga0207671_10047935 3300025914 Bacteria 3162
58 Ga0207681_10068557 3300025923 Bacteria 2464
59 Ga0207694_10000739 3300025924 Bacteria 29361
60 Ga0207650_10245282 3300025925 Bacteria 1449
61 Ga0207712_10005148 3300025961 Bacteria 8274
62 Ga0207668_10001226 3300025972 Bacteria 15248
63 Ga0207668_10011905 3300025972 Bacteria 5305
64 Ga0207658_10003907 3300025986 Bacteria 10476
65 Ga0207678_10025268 3300026067 Bacteria 5186
66 Ga0207641_10001333 3300026088 Bacteria 24434
67 Ga0207675_100007274 3300026118 Bacteria 10465
68 Ga0207698_10008047 3300026142 Bacteria 6648
69 Ga0209179_1003467 3300027512 Bacteria 2277
70 Ga0209588_1001779 3300027671 Bacteria 5718
71 Ga0268265_10013347 3300028380 Bacteria 5581
72 Ga0268264_10005979 3300028381 Bacteria 10304
73 Ga0307412_10006699 3300031911 Bacteria 6530
74 Ga0436360_0192702 3300039438 Bacteria 9450
75 Ga0436360_0787504 3300039438 Bacteria 5403
76 Ga0436361_0242500 3300039447 Bacteria 10745
77 Ga0436361_0894226 3300039447 Bacteria 9109
78 Ga0436361_1218688 3300039447 Bacteria 10481
79 Ga0436362_0105480 3300039453 Bacteria 14435
80 Ga0436362_0302276 3300039453 Bacteria 2873
81 Ga0439436_0000013 3300041404 Bacteria 91059
82 Ga0450908_004970 3300042184 Bacteria 2553
83 Ga0466982_0000110 3300044672 Bacteria 20099
84 Ga0495617_000107 3300046452 Bacteria 60888
85 Ga0495617_000564 3300046452 Bacteria 19070
86 Ga0495638_0000276 3300046460 Bacteria 69447
87 Ga0495638_0025290 3300046460 Bacteria 3862
88 Ga0495650_0001188 3300046471 Bacteria 27630
89 Ga0495585_0001902 3300046492 Bacteria 15710
90 Ga0495607_0000151 3300046501 Bacteria 72430
91 Ga0495607_0000764 3300046501 Bacteria 30834
92 Ga0495607_0001022 3300046501 Bacteria 25723
93 Ga0495607_0003547 3300046501 Bacteria 11882
94 Ga0495607_0078519 3300046501 Bacteria 1821
95 Ga0495606_0000043 3300046507 Bacteria 214367
96 Ga0495606_0000597 3300046507 Bacteria 57179
97 Ga0495606_0000894 3300046507 Bacteria 44402
98 Ga0495606_0003086 3300046507 Bacteria 18154
99 Ga0495616_0000163 3300046513 Bacteria 58433
100 Ga0495620_0000187 3300046515 Bacteria 47716
101 Ga0495631_0000262 3300046518 Bacteria 36730
102 Ga0495632_0000032 3300046519 Bacteria 164561
103 Ga0495632_0001262 3300046519 Bacteria 21459
104 Ga0495632_0022559 3300046519 Bacteria 3372
105 Ga0495632_0091446 3300046519 Bacteria 1442
106 Ga0495637_0008358 3300046520 Bacteria 5088
107 Ga0495648_0006688 3300046524 Bacteria 9337
108 Ga0495609_0008513 3300046538 Bacteria 5021
109 Ga0495597_0000498 3300046542 Bacteria 32861
110 Ga0495597_0007228 3300046542 Bacteria 5658
111 Ga0495668_0004666 3300046616 Bacteria 9620
112 Ga0495611_0000001 3300046648 Bacteria 2628469
113 Ga0495611_0000007 3300046648 Bacteria 224144
114 Ga0495625_0000001 3300046660 Bacteria 1641829
115 Ga0495625_0008984 3300046660 Bacteria 8439
116 Ga0495625_0029827 3300046660 Bacteria 4075
117 Ga0495661_0052941 3300046665 Bacteria 2443
118 Ga0495670_0001435 3300046691 Bacteria 11676
119 Ga0495670_0007195 3300046691 Bacteria 5476
120 Ga0495671_0005822 3300046692 Bacteria 7179
121 Ga0495649_0004182 3300046694 Bacteria 9473
122 Ga0495649_0020779 3300046694 Bacteria 3679
123 Ga0495589_0000371 3300046794 Bacteria 34490
124 Ga0495660_0000076 3300046810 Bacteria 105580
125 Ga0495660_0033332 3300046810 Bacteria 2889
126 Ga0495683_0011509 3300047323 Bacteria 4652
127 Ga0495683_0137907 3300047323 Bacteria 1145
128 Ga0495679_000001 3300047446 Bacteria 1607568
129 Ga0495673_0000010 3300047469 Bacteria 709599
130 Ga0495673_0000087 3300047469 Bacteria 190669
131 Ga0495673_0000414 3300047469 Bacteria 49665
132 Ga0495673_0047801 3300047469 Bacteria 1889
133 Ga0495686_0000053 3300047472 Bacteria 259537
134 Ga0495686_0000123 3300047472 Bacteria 159841
135 Ga0495686_0000288 3300047472 Bacteria 88523
136 Ga0495686_0000792 3300047472 Bacteria 41248
137 Ga0495686_0001159 3300047472 Bacteria 30957
138 Ga0495686_0001937 3300047472 Bacteria 20596
139 Ga0495686_0016011 3300047472 Bacteria 5097
140 Ga0495686_0072269 3300047472 Bacteria 2121
141 Ga0496101_0008290 3300048904 Bacteria 6789
142 Ga0496102_0294820 3300048905 Bacteria 1529
143 Ga0496106_0003113 3300048909 Bacteria 12392
144 Ga0496109_0045661 3300048912 Bacteria 3976
145 Ga0496117_0013922 3300048920 Bacteria 6973
146 Ga0496118_0001240 3300048921 Bacteria 39188
147 Ga0496118_0006959 3300048921 Bacteria 12214
148 Ga0496118_0007865 3300048921 Bacteria 11178
149 Ga0496119_0013349 3300048922 Bacteria 6559
150 Ga0496121_0000129 3300048924 Bacteria 168148
151 Ga0496121_0000213 3300048924 Bacteria 127487
152 Ga0496121_0002938 3300048924 Bacteria 24922
153 Ga0496121_0008240 3300048924 Bacteria 12340
154 Ga0496121_0063448 3300048924 Bacteria 3019
155 Ga0496121_0096432 3300048924 Bacteria 2295
156 Ga0496121_0178457 3300048924 Bacteria 1535
157 Ga0496122_0027619 3300048925 Bacteria 4844
158 Ga0496122_0043055 3300048925 Bacteria 3542
159 Ga0496122_0114723 3300048925 Bacteria 1757
160 Ga0496123_0028733 3300048926 Bacteria 4110
161 Ga0496123_0058730 3300048926 Bacteria 2492
162 Ga0496124_0000007 3300048927 Bacteria 883534
163 Ga0496124_0004273 3300048927 Bacteria 16795
164 Ga0496124_0006442 3300048927 Bacteria 12791
165 Ga0496125_0016707 3300048928 Bacteria 7036
166 Ga0496126_0010976 3300048929 Bacteria 9429
167 Ga0496126_0083050 3300048929 Bacteria 2828
168 Ga0495678_002472 3300049459 Bacteria 12469
169 nmdc:mga0k408_21848_c1 3300050493 Bacteria 3599
170 nmdc:mga07m45_23575_c1 3300050496 Bacteria 3366
171 nmdc:mga0sz30_45343_c2 3300050516 Bacteria 1426
172 Ga0500578_0000006 3300053086 Bacteria 234598
173 Ga0500643_000149 3300053087 Bacteria 71442
174 Ga0500651_0150533 3300053093 Bacteria 1397
175 Ga0500641_0002728 3300053096 Bacteria 6234
176 Ga0500555_000655 3300053103 Bacteria 13265
177 Ga0500652_078118 3300053131 Bacteria 1377
178 Ga0500568_0037119 3300053139 Bacteria 1978
179 Ga0500586_010550 3300053145 Bacteria 2612
180 Ga0500622_0115634 3300053156 Bacteria 1306
181 2545673860 2545555834 Bacteria 8130841
182 2587725031 2585428057 Bacteria 6737412
183 2587731610 2585428058 Bacteria 6853932
184 2588292537 2588253510 Bacteria 6901809
185 2595448328 2593339238 Bacteria 4182970
186 2595451612 2593339239 Bacteria 4124669
187 2643968089 2643221592 Bacteria 6608788
188 2644142555 2643221625 Bacteria 6512927
189 2644276946 2643221648 Bacteria 6521465
190 2671694312 2671180139 Bacteria 4196045
191 2721028336 2718218334 Bacteria 4765486
192 2735836086 2734482264 Unclassified 5014763
193 2738843632 2738541300 Bacteria 6675882
194 2739227735 2738543009 Bacteria 4944499
195 2739244970 2738543012 Bacteria 7115078
196 2739275294 2738543018 Bacteria 6718814
197 2739344338 2738543030 Bacteria 6719714
198 2816474674 2816332133 Bacteria 7249298
199 2842699694 2842698319 Bacteria 5190321
200 2842738827 2842733646 Bacteria 5716726
201 2842915289 2842914999 Bacteria 4419378
202 2842921636 2842918807 Bacteria 4289178
203 2857543755 2857542790 Bacteria 5326616
204 2874594133 2874590934 Bacteria 8299676
205 2876773639 2876771140 Bacteria 8287509
206 2876824733 2876818435 Bacteria 8274608
207 2879081460 2879074833 Bacteria 8279565
208 2879106948 2879099564 Bacteria 10442239
209 2879133168 2879127579 Bacteria 8294491
210 2879149450 2879142872 Bacteria 8267021
211 2884339879 2884338543 Bacteria 4610696
212 2919088457 2919085039 Bacteria 4532964
213 2919404693 2919404418 Bacteria 4232372
214 3003665999 3003665799 Bacteria 7279786
215 641641945 641522639 Bacteria 7737025
216 Ga0105239_10028758
217 JGI24736J21556_1003543
218 JGI25153J46596_10004922
219 Ga0006562J51391_1039586
220 Ga0065165_1000186
221 Ga0070670_100065810
222 Ga0070666_10002585
223 Ga0070668_100001000
224 Ga0070668_100018133
225 Ga0070669_100075934
226 Ga0070667_100005637
227 Ga0070663_100015210
228 Ga0070685_10000149
229 Ga0068855_100203795
230 Ga0068852_100036214
231 Ga0068861_100000707
232 Ga0068863_100001504
233 Ga0068860_100008305
234 Ga0075367_10156536
235 Ga0075369_10058043
236 Ga0075366_10061597
237 Ga0099794_10000298
238 Ga0099795_10002579
239 Ga0105240_10002458
240 Ga0105247_10010160
241 Ga0105237_10007909
242 Ga0105238_10015291
243 Ga0105249_10026376
244 Ga0099796_10050255
245 Ga0105239_10144192
246 Ga0157370_10004700
247 Ga0157370_10016285
248 Ga0157369_10003879
249 Ga0157378_10429477
250 Ga0157372_10071370
251 Ga0182008_10041514
252 Ga0182006_1000077
253 Ga0182006_1000170
254 Ga0182007_10019851
255 Ga0182005_1000060
256 Ga0182005_1000829
257 Ga0182005_1005681
258 Ga0182005_1008831
259 Ga0163161_10007674
260 Ga0213873_10000314
261 Ga0213872_10025933
262 Ga0209674_102011
263 Ga0209437_103984
264 Ga0209148_1002015
265 Ga0209129_1003811
266 Ga0209758_1000193
267 Ga0209256_1003347
268 Ga0209051_1009114
269 Ga0207680_10029707
270 Ga0207647_10000006
271 Ga0207695_10000040
272 Ga0207671_10047935
273 Ga0207681_10068557
274 Ga0207694_10000739
275 Ga0207650_10245282
276 Ga0207712_10005148
277 Ga0207668_10001226
278 Ga0207668_10011905
279 Ga0207658_10003907
280 Ga0207678_10025268
281 Ga0207641_10001333
282 Ga0207675_100007274
283 Ga0207698_10008047
284 Ga0209179_1003467
285 Ga0209588_1001779
286 Ga0268265_10013347
287 Ga0268264_10005979
288 Ga0307412_10006699
289 Ga0436360_0192702
290 Ga0436360_0787504
291 Ga0436361_0242500
292 Ga0436361_0894226
293 Ga0436361_1218688
294 Ga0436362_0105480
295 Ga0436362_0302276
296 Ga0439436_0000013
297 Ga0450908_004970
298 Ga0466982_0000110
299 Ga0495617_000107
300 Ga0495617_000564
301 Ga0495638_0000276
302 Ga0495638_0025290
303 Ga0495650_0001188
304 Ga0495585_0001902
305 Ga0495607_0000151
306 Ga0495607_0000764
307 Ga0495607_0001022
308 Ga0495607_0003547
309 Ga0495607_0078519
310 Ga0495606_0000043
311 Ga0495606_0000597
312 Ga0495606_0000894
313 Ga0495606_0003086
314 Ga0495616_0000163
315 Ga0495620_0000187
316 Ga0495631_0000262
317 Ga0495632_0000032
318 Ga0495632_0001262
319 Ga0495632_0022559
320 Ga0495632_0091446
321 Ga0495637_0008358
322 Ga0495648_0006688
323 Ga0495609_0008513
324 Ga0495597_0000498
325 Ga0495597_0007228
326 Ga0495668_0004666
327 Ga0495611_0000001
328 Ga0495611_0000007
329 Ga0495625_0000001
330 Ga0495625_0008984
331 Ga0495625_0029827
332 Ga0495661_0052941
333 Ga0495670_0001435
334 Ga0495670_0007195
335 Ga0495671_0005822
336 Ga0495649_0004182
337 Ga0495649_0020779
338 Ga0495589_0000371
339 Ga0495660_0000076
340 Ga0495660_0033332
341 Ga0495683_0011509
342 Ga0495683_0137907
343 Ga0495679_000001
344 Ga0495673_0000010
345 Ga0495673_0000087
346 Ga0495673_0000414
347 Ga0495673_0047801
348 Ga0495686_0000053
349 Ga0495686_0000123
350 Ga0495686_0000288
351 Ga0495686_0000792
352 Ga0495686_0001159
353 Ga0495686_0001937
354 Ga0495686_0016011
355 Ga0495686_0072269
356 Ga0496101_0008290
357 Ga0496102_0294820
358 Ga0496106_0003113
359 Ga0496109_0045661
360 Ga0496117_0013922
361 Ga0496118_0001240
362 Ga0496118_0006959
363 Ga0496118_0007865
364 Ga0496119_0013349
365 Ga0496121_0000129
366 Ga0496121_0000213
367 Ga0496121_0002938
368 Ga0496121_0008240
369 Ga0496121_0063448
370 Ga0496121_0096432
371 Ga0496121_0178457
372 Ga0496122_0027619
373 Ga0496122_0043055
374 Ga0496122_0114723
375 Ga0496123_0028733
376 Ga0496123_0058730
377 Ga0496124_0000007
378 Ga0496124_0004273
379 Ga0496124_0006442
380 Ga0496125_0016707
381 Ga0496126_0010976
382 Ga0496126_0083050
383 Ga0495678_002472
384 nmdc:mga0k408_21848_c1
385 nmdc:mga07m45_23575_c1
386 nmdc:mga0sz30_45343_c2
387 Ga0500578_0000006
388 Ga0500643_000149
389 Ga0500651_0150533
390 Ga0500641_0002728
391 Ga0500555_000655
392 Ga0500652_078118
393 Ga0500568_0037119
394 Ga0500586_010550
395 Ga0500622_0115634
396 2545673860
397 2587725031
398 2587731610
399 2588292537
400 2595448328
401 2595451612
402 2643968089
403 2644142555
404 2644276946
405 2671694312
406 2721028336
407 2735836086
408 2738843632
409 2739227735
410 2739244970
411 2739275294
412 2739344338
413 2816474674
414 2842699694
415 2842738827
416 2842915289
417 2842921636
418 2857543755
419 2874594133
420 2876773639
421 2876824733
422 2879081460
423 2879106948
424 2879133168
425 2879149450
426 2884339879
427 2919088457
428 2919404693
429 3003665999
430 641641945

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e4y-assembly1.cif.gz_A crystal structure of a 33kda catalase-related protein from mycobacterium avium subsp. paratuberculosis. i2(1)2(1)2(1) crystal form 0.7345 27 351
3e4y-assembly1.cif.gz_A crystal structure of a 33kda catalase-related protein from mycobacterium avium subsp. paratuberculosis. i2(1)2(1)2(1) crystal form 0.7233 27 351
2xq1-assembly3.cif.gz_K crystal structure of peroxisomal catalase from the yeast hansenula polymorpha 0.7065 39 349
4aul-assembly1.cif.gz_B crystal structure, recombinant expression and mutagenesis studies of the bifunctional catalase-phenol oxidase from scytalidium thermophilum 0.7007 39 354
1ye9-assembly2.cif.gz_J crystal structure of proteolytically truncated catalase hpii from e. coli 0.6985 39 148
ID Description Score Start End Superfamily
3e4wB02 Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain 0.7517 58 331 2.40.180.10
3e4wB02 Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain 0.7385 58 331 2.40.180.10
af_Q0D9C4_6_491_2.40.180.10 Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain 0.6873 39 354 2.40.180.10
4b7fD02 Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain 0.6867 49 353 2.40.180.10
af_P06115_9_548_2.40.180.10 Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain 0.6776 38 354 2.40.180.10
ID Description Score Start End GO Terms
AF-A0A2A2K0B7-F1-model_v4 Calcineurin-like phosphoesterase domain-containing protein 0.9761 8 360 GO:0016787
GO:0020037
AF-A0A4Q3WCB8-F1-model_v4 Catalase 0.9729 194 368 GO:0020037
AF-A0A2W6YZ29-F1-model_v4 Catalase 0.9698 208 366 GO:0020037
AF-A0A6J4Q6X0-F1-model_v4 Catalase-like heme-binding protein 0.9691 8 361 GO:0020037
AF-A0A679IW73-F1-model_v4 Catalase 0.9688 8 359 GO:0020037

Map