F325500

General Info

Members Datasets Scaffolds Average Seq Length
214 158 428 481

Family's Representative Sequence

Representative Sequence 3300042002|Ga0439442_000059|Ga0439442_000059_16544_18109
Length 521
Sequence MSAAMLDLTVPALRAAPFTPELMTVKKDPMSISNSESRTTEAAPRTEHSTALRAGSIGVMGILFFVLSAQAPLTGIVGASPLAAALGNGAGAPGAYLIVGIVIVIFAVGFVAMSRKIQANGAFYAYVTAAFGRKIGAGAAWLALLAYSTVQAAMYGLYGAAFSGLLASVGVSAPWWLLALVTMAGVQVLGSMNIELGARVLALLVGLEVAVLLMFGFTVLFRGGGPEGLSLAASFSPEAIASGAPGVAIMFAVASMFGFESTAIYSAEAKDAHKTVARATYLSVGVIAVFFSFISWMLVSYYGPSGVIGAAGAALESGDSTAFVLTPMVELFGPWAGITTGILLVTSLLAGIIAFHNGINRYLHSLALRGSLPAIVARTNRHRAPAAAAWIQTATAVALVAPFALLALDPVLTLFSWFSGLAVAALLVLYMLCSIAVVGFFRRERVTGQLWQTLLAPALASVLLAWVLFLVVSNFTSLIGGSAETAVALLVAVPAVFAAGVVVEGQVERRRVAATLGHSVS

Samples

Sample ID Description Type Environment
1 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
8 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
9 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
10 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
11 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
12 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
13 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
17 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
18 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
19 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
20 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
21 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
22 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
23 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
24 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
25 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
26 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
27 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
28 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
29 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
30 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
31 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
32 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
33 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
34 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
35 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
36 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
37 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
38 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
39 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
40 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
41 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
42 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
43 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
44 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
45 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
46 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
47 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
50 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
51 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
52 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
53 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
54 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
55 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
58 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
59 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
60 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
61 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
62 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
63 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
64 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
65 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
66 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
67 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
68 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
69 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
70 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
71 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
72 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
73 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
74 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
75 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
76 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
77 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
78 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
79 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
80 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
81 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
82 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
83 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
84 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
85 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
86 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
87 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
88 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
89 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
90 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
91 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
92 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
93 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
94 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
95 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
96 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
97 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
98 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
99 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
100 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
101 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
106 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
107 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
108 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
109 2643221647 Streptomyces sp. Root369 Isolate Unclassified
110 2643221714 Streptomyces sp. Root264 Isolate Unclassified
111 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
112 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
113 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
114 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
115 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
116 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
117 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
118 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
119 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
120 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
121 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
122 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
123 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
124 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
125 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
126 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
127 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
128 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
129 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
130 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
131 2862574272 Streptomyces sp. AcE210 Isolate Nodule
132 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
133 2867428634 Streptomyces sp. RP5T Isolate Unclassified
134 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
135 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
136 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
137 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
138 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
139 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
140 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
141 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
142 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
143 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
144 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
145 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
146 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
147 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
148 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
149 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
150 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
151 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
152 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
153 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
154 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
155 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
156 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
157 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
158 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 74.3
Metatranscriptomes 0
Isolates 25.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.4
Nodule 1.87
Rhizoplane 7.48
Rhizosphere 71.96
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439442_000059 3300042002 Bacteria 25930
2 JGI24737J22298_10019769 3300001990 Bacteria 2154
3 rootH1_10033231 3300003316 Bacteria 3918
4 rootL2_10165216 3300003322 Bacteria 2270
5 rootL2_10165217 3300003322 Bacteria 1723
6 rootH1_10095695 3300003323 Bacteria 3692
7 rootH1_10114832 3300003323 Bacteria 5397
8 Ga0070670_100063160 3300005331 Bacteria 3178
9 Ga0075368_10013347 3300006042 Bacteria 3016
10 Ga0075432_10001378 3300006058 Bacteria 7901
11 Ga0075367_10003533 3300006178 Bacteria 7474
12 Ga0105244_10061905 3300009036 Bacteria 1882
13 Ga0157369_10001984 3300013105 Bacteria 24634
14 Ga0157369_10071949 3300013105 Bacteria 3711
15 Ga0157369_10156861 3300013105 Bacteria 2404
16 Ga0163162_10013822 3300013306 Bacteria 7886
17 Ga0207647_10025529 3300025904 Bacteria 3880
18 Ga0207691_10045590 3300025940 Bacteria 4029
19 Ga0207683_10043835 3300026121 Bacteria 3910
20 Ga0207428_10002790 3300027907 Bacteria 17343
21 Ga0307511_10021372 3300030521 Bacteria 6098
22 Ga0307408_100028646 3300031548 Bacteria 3850
23 Ga0307408_100030722 3300031548 Bacteria 3733
24 Ga0307408_100075638 3300031548 Bacteria 2502
25 Ga0307405_10012751 3300031731 Bacteria 4464
26 Ga0307405_10043412 3300031731 Bacteria 2743
27 Ga0307405_10067335 3300031731 Bacteria 2287
28 Ga0307413_10028478 3300031824 Bacteria 3112
29 Ga0307413_10031863 3300031824 Bacteria 2980
30 Ga0307413_10136019 3300031824 Bacteria 1690
31 Ga0307410_10025785 3300031852 Bacteria 3692
32 Ga0307410_10048659 3300031852 Bacteria 2841
33 Ga0307410_10067901 3300031852 Bacteria 2460
34 Ga0307410_10103337 3300031852 Bacteria 2046
35 Ga0307410_10143665 3300031852 Bacteria 1768
36 Ga0307406_10057419 3300031901 Bacteria 2496
37 Ga0307407_10054253 3300031903 Bacteria 2310
38 Ga0307412_10004641 3300031911 Bacteria 7656
39 Ga0307412_10023006 3300031911 Bacteria 3829
40 Ga0307409_100200813 3300031995 Bacteria 1783
41 Ga0307416_100022057 3300032002 Bacteria 4586
42 Ga0307416_100042820 3300032002 Bacteria 3539
43 Ga0307416_100099909 3300032002 Bacteria 2521
44 Ga0307414_10037787 3300032004 Bacteria 3236
45 Ga0395899_0001280 3300037312 Bacteria 21799
46 Ga0395899_0009279 3300037312 Bacteria 7554
47 Ga0395899_0020730 3300037312 Bacteria 4984
48 Ga0395898_0016682 3300037466 Bacteria 7508
49 Ga0439436_0008563 3300041404 Bacteria 3146
50 Ga0439436_0012272 3300041404 Bacteria 2600
51 Ga0439436_0019991 3300041404 Bacteria 1995
52 Ga0439436_0024251 3300041404 Bacteria 1791
53 Ga0439466_0022020 3300041411 Bacteria 2253
54 Ga0451853_2021892 3300041512 Bacteria 3129
55 Ga0439433_0000675 3300041999 Bacteria 6578
56 Ga0439433_0001755 3300041999 Bacteria 4506
57 Ga0439432_015000 3300042006 Bacteria 2619
58 Ga0439449_0001820 3300042007 Bacteria 8384
59 Ga0439449_0003580 3300042007 Bacteria 6034
60 Ga0439449_0007068 3300042007 Bacteria 4275
61 Ga0439449_0036545 3300042007 Bacteria 1827
62 Ga0439449_0042336 3300042007 Bacteria 1692
63 Ga0439455_0000627 3300042012 Bacteria 5146
64 Ga0439457_001240 3300042014 Bacteria 7668
65 Ga0439457_002117 3300042014 Bacteria 5777
66 Ga0439462_0012029 3300042015 Bacteria 2208
67 Ga0439462_0013518 3300042015 Bacteria 2092
68 Ga0450920_000045 3300042122 Bacteria 15447
69 Ga0450920_009896 3300042122 Bacteria 1761
70 Ga0450894_000075 3300042131 Bacteria 15784
71 Ga0450894_000210 3300042131 Bacteria 10578
72 Ga0450898_002083 3300042134 Bacteria 2754
73 Ga0450899_000168 3300042135 Bacteria 6507
74 Ga0450903_000083 3300042138 Bacteria 19401
75 Ga0450906_002550 3300042145 Bacteria 3975
76 Ga0450907_000524 3300042146 Bacteria 10521
77 Ga0439434_0000743 3300042435 Bacteria 9357
78 Ga0439434_0014235 3300042435 Bacteria 2366
79 Ga0450918_000379 3300042531 Bacteria 9725
80 Ga0466972_0000460 3300044658 Bacteria 20804
81 Ga0466965_0000093 3300044683 Bacteria 25726
82 Ga0466966_0000852 3300044684 Bacteria 19462
83 Ga0466966_0002948 3300044684 Bacteria 11200
84 Ga0466961_0000814 3300044693 Bacteria 19462
85 Ga0466961_0073953 3300044693 Bacteria 2161
86 Ga0466963_0001556 3300044694 Bacteria 12430
87 Ga0466964_0030775 3300044706 Bacteria 2125
88 Ga0466970_0000327 3300044765 Bacteria 23151
89 Ga0466957_0000595 3300044842 Bacteria 18393
90 Ga0466959_0003287 3300045049 Bacteria 10539
91 Ga0466958_0001177 3300045836 Bacteria 12173
92 Ga0466967_0008145 3300045976 Bacteria 7650
93 Ga0466967_0026781 3300045976 Bacteria 4783
94 Ga0495603_0004288 3300046455 Bacteria 8499
95 Ga0495603_0004564 3300046455 Bacteria 8264
96 Ga0495603_0026698 3300046455 Bacteria 3487
97 Ga0495629_0003379 3300046459 Bacteria 12063
98 Ga0495653_0007781 3300046463 Bacteria 8772
99 Ga0495582_0020160 3300046473 Bacteria 3649
100 Ga0495662_0004085 3300046476 Bacteria 7351
101 Ga0495664_0019172 3300046477 Bacteria 3930
102 Ga0495594_0082680 3300046499 Bacteria 1794
103 Ga0495630_0049645 3300046517 Bacteria 3140
104 Ga0495631_0029314 3300046518 Bacteria 2504
105 Ga0495665_0001009 3300046531 Bacteria 14930
106 Ga0495586_0004829 3300046535 Bacteria 7206
107 Ga0495587_0032680 3300046536 Bacteria 3144
108 Ga0495645_0006522 3300046543 Bacteria 8101
109 Ga0495667_0001677 3300046559 Bacteria 14692
110 Ga0495656_0001324 3300046615 Bacteria 8066
111 Ga0495588_0001663 3300046674 Bacteria 9488
112 Ga0495588_0009247 3300046674 Bacteria 4551
113 Ga0495623_0001691 3300046679 Bacteria 14824
114 Ga0495613_0003893 3300046689 Bacteria 11170
115 Ga0495613_0098701 3300046689 Bacteria 2111
116 Ga0495670_0003633 3300046691 Bacteria 7580
117 Ga0495670_0057171 3300046691 Bacteria 1958
118 Ga0495589_0053791 3300046794 Bacteria 1986
119 Ga0495600_0019881 3300046809 Bacteria 4292
120 Ga0495600_0099064 3300046809 Bacteria 1900
121 Ga0495581_0020089 3300047315 Bacteria 3877
122 Ga0495604_0001540 3300047317 Bacteria 18980
123 Ga0495604_0007708 3300047317 Bacteria 8530
124 Ga0495636_0012062 3300047318 Bacteria 3425
125 Ga0495676_0010428 3300047321 Bacteria 8427
126 Ga0495680_0022789 3300047322 Bacteria 5215
127 Ga0495675_0001048 3300047444 Bacteria 16782
128 Ga0495675_0004954 3300047444 Bacteria 8110
129 Ga0495675_0005164 3300047444 Bacteria 7947
130 Ga0495685_006151 3300047447 Bacteria 3925
131 Ga0495685_042700 3300047447 Bacteria 1547
132 Ga0495684_0025022 3300047471 Bacteria 4592
133 Ga0495686_0018883 3300047472 Bacteria 4618
134 Ga0495593_0053773 3300047673 Bacteria 2124
135 Ga0495614_0001379 3300048089 Bacteria 10482
136 Ga0496101_0007011 3300048904 Bacteria 7279
137 Ga0496101_0030422 3300048904 Bacteria 3785
138 Ga0496102_0005412 3300048905 Bacteria 10841
139 Ga0496102_0098491 3300048905 Bacteria 2713
140 Ga0496102_0182639 3300048905 Bacteria 1976
141 Ga0496103_0006171 3300048906 Bacteria 7161
142 Ga0496103_0073902 3300048906 Bacteria 2136
143 Ga0496103_0128500 3300048906 Bacteria 1617
144 Ga0496104_0001944 3300048907 Bacteria 17917
145 Ga0496104_0047017 3300048907 Bacteria 4066
146 Ga0496105_0007041 3300048908 Bacteria 8665
147 Ga0496105_0028372 3300048908 Bacteria 4576
148 Ga0496106_0010936 3300048909 Bacteria 6707
149 Ga0496107_0012927 3300048910 Bacteria 5832
150 Ga0496108_0105794 3300048911 Bacteria 2402
151 Ga0496115_0187573 3300048918 Bacteria 1709
152 Ga0496119_0103028 3300048922 Bacteria 1599
153 Ga0496124_0066431 3300048927 Bacteria 3003
154 Ga0501034_0034353 3300049571 Bacteria 5140
155 Ga0501038_0022167 3300049574 Bacteria 5692
156 Ga0501043_0048087 3300049579 Bacteria 3353
157 Ga0501043_0070173 3300049579 Bacteria 2752
158 nmdc:mga06z11_10265_c1 3300050494 Bacteria 3981
159 Ga0466962_0002355 3300061719 Bacteria 8969
160 2585309603 2582581313 Bacteria 10042643
161 2588107604 2585428157 Bacteria 3018951
162 2644270087 2643221647 Bacteria 10741251
163 2644631557 2643221714 Bacteria 9015452
164 2645725034 2643221962 Bacteria 3874254
165 2691515671 2690315906 Bacteria 4517044
166 2747952333 2747842429 Bacteria 3914386
167 2775655795 2775506735 Bacteria 4556596
168 2775657434 2775506735 Bacteria 4556596
169 2785339369 2784746763 Bacteria 9783172
170 2785366780 2784746768 Bacteria 10036182
171 2786667839 2786546132 Bacteria 10419719
172 2808828787 2808606357 Bacteria 4466944
173 2808846615 2808606359 Bacteria 9866990
174 2808850050 2808606360 Bacteria 4404006
175 2808877392 2808606366 Bacteria 4415912
176 2808893070 2808606370 Bacteria 4942454
177 2808898867 2808606371 Bacteria 4251511
178 2808916975 2808606375 Bacteria 9466072
179 2812319478 2811994871 Bacteria 4497550
180 2812333665 2811994874 Bacteria 5367947
181 2812353986 2811994879 Bacteria 9313447
182 2852639167 2852635781 Bacteria 8251373
183 2862185841 2862178590 Bacteria 8583590
184 2862385608 2862382967 Bacteria 10317375
185 2862574574 2862574272 Bacteria 10567477
186 2863409624 2863404153 Bacteria 9672205
187 2863412452 2863404153 Bacteria 9672205
188 2867437199 2867428634 Bacteria 9590268
189 2877676663 2877676314 Bacteria 9512378
190 2912723102 2912715099 Bacteria 9460473
191 2912727218 2912723979 Bacteria 8557534
192 2919035301 2919034639 Bacteria 4763403
193 2919392060 2919391150 Bacteria 4884741
194 2945917220 2945916053 Bacteria 4555517
195 2945922526 2945920336 Bacteria 4501603
196 2945956686 2945956166 Bacteria 5110334
197 2946037184 2946037020 Bacteria 4900426
198 2946071707 2946064051 Bacteria 8957905
199 2946079254 2946072368 Bacteria 8999607
200 2947232601 2947224130 Bacteria 9938529
201 2953998437 2953998280 Bacteria 4812144
202 2954673979 2954673503 Bacteria 9685905
203 2954690011 2954682443 Bacteria 9862841
204 2954711755 2954711539 Bacteria 10867210
205 2954721675 2954721474 Bacteria 10456478
206 2954740152 2954731030 Bacteria 10243860
207 2954740585 2954740390 Bacteria 10229294
208 2954758977 2954749733 Bacteria 10366972
209 2954759597 2954759201 Bacteria 9358192
210 2974305189 2974302888 Bacteria 4369871
211 2990066497 2990059506 Bacteria 9321252
212 8008564615 8008558824 Bacteria 10610750
213 8008565821 8008558824 Bacteria 10610750
214 8048409929 8048406513 Bacteria 8936924
215 Ga0439442_000059
216 JGI24737J22298_10019769
217 rootH1_10033231
218 rootL2_10165216
219 rootL2_10165217
220 rootH1_10095695
221 rootH1_10114832
222 Ga0070670_100063160
223 Ga0075368_10013347
224 Ga0075432_10001378
225 Ga0075367_10003533
226 Ga0105244_10061905
227 Ga0157369_10001984
228 Ga0157369_10071949
229 Ga0157369_10156861
230 Ga0163162_10013822
231 Ga0207647_10025529
232 Ga0207691_10045590
233 Ga0207683_10043835
234 Ga0207428_10002790
235 Ga0307511_10021372
236 Ga0307408_100028646
237 Ga0307408_100030722
238 Ga0307408_100075638
239 Ga0307405_10012751
240 Ga0307405_10043412
241 Ga0307405_10067335
242 Ga0307413_10028478
243 Ga0307413_10031863
244 Ga0307413_10136019
245 Ga0307410_10025785
246 Ga0307410_10048659
247 Ga0307410_10067901
248 Ga0307410_10103337
249 Ga0307410_10143665
250 Ga0307406_10057419
251 Ga0307407_10054253
252 Ga0307412_10004641
253 Ga0307412_10023006
254 Ga0307409_100200813
255 Ga0307416_100022057
256 Ga0307416_100042820
257 Ga0307416_100099909
258 Ga0307414_10037787
259 Ga0395899_0001280
260 Ga0395899_0009279
261 Ga0395899_0020730
262 Ga0395898_0016682
263 Ga0439436_0008563
264 Ga0439436_0012272
265 Ga0439436_0019991
266 Ga0439436_0024251
267 Ga0439466_0022020
268 Ga0451853_2021892
269 Ga0439433_0000675
270 Ga0439433_0001755
271 Ga0439432_015000
272 Ga0439449_0001820
273 Ga0439449_0003580
274 Ga0439449_0007068
275 Ga0439449_0036545
276 Ga0439449_0042336
277 Ga0439455_0000627
278 Ga0439457_001240
279 Ga0439457_002117
280 Ga0439462_0012029
281 Ga0439462_0013518
282 Ga0450920_000045
283 Ga0450920_009896
284 Ga0450894_000075
285 Ga0450894_000210
286 Ga0450898_002083
287 Ga0450899_000168
288 Ga0450903_000083
289 Ga0450906_002550
290 Ga0450907_000524
291 Ga0439434_0000743
292 Ga0439434_0014235
293 Ga0450918_000379
294 Ga0466972_0000460
295 Ga0466965_0000093
296 Ga0466966_0000852
297 Ga0466966_0002948
298 Ga0466961_0000814
299 Ga0466961_0073953
300 Ga0466963_0001556
301 Ga0466964_0030775
302 Ga0466970_0000327
303 Ga0466957_0000595
304 Ga0466959_0003287
305 Ga0466958_0001177
306 Ga0466967_0008145
307 Ga0466967_0026781
308 Ga0495603_0004288
309 Ga0495603_0004564
310 Ga0495603_0026698
311 Ga0495629_0003379
312 Ga0495653_0007781
313 Ga0495582_0020160
314 Ga0495662_0004085
315 Ga0495664_0019172
316 Ga0495594_0082680
317 Ga0495630_0049645
318 Ga0495631_0029314
319 Ga0495665_0001009
320 Ga0495586_0004829
321 Ga0495587_0032680
322 Ga0495645_0006522
323 Ga0495667_0001677
324 Ga0495656_0001324
325 Ga0495588_0001663
326 Ga0495588_0009247
327 Ga0495623_0001691
328 Ga0495613_0003893
329 Ga0495613_0098701
330 Ga0495670_0003633
331 Ga0495670_0057171
332 Ga0495589_0053791
333 Ga0495600_0019881
334 Ga0495600_0099064
335 Ga0495581_0020089
336 Ga0495604_0001540
337 Ga0495604_0007708
338 Ga0495636_0012062
339 Ga0495676_0010428
340 Ga0495680_0022789
341 Ga0495675_0001048
342 Ga0495675_0004954
343 Ga0495675_0005164
344 Ga0495685_006151
345 Ga0495685_042700
346 Ga0495684_0025022
347 Ga0495686_0018883
348 Ga0495593_0053773
349 Ga0495614_0001379
350 Ga0496101_0007011
351 Ga0496101_0030422
352 Ga0496102_0005412
353 Ga0496102_0098491
354 Ga0496102_0182639
355 Ga0496103_0006171
356 Ga0496103_0073902
357 Ga0496103_0128500
358 Ga0496104_0001944
359 Ga0496104_0047017
360 Ga0496105_0007041
361 Ga0496105_0028372
362 Ga0496106_0010936
363 Ga0496107_0012927
364 Ga0496108_0105794
365 Ga0496115_0187573
366 Ga0496119_0103028
367 Ga0496124_0066431
368 Ga0501034_0034353
369 Ga0501038_0022167
370 Ga0501043_0048087
371 Ga0501043_0070173
372 nmdc:mga06z11_10265_c1
373 Ga0466962_0002355
374 2585309603
375 2588107604
376 2644270087
377 2644631557
378 2645725034
379 2691515671
380 2747952333
381 2775655795
382 2775657434
383 2785339369
384 2785366780
385 2786667839
386 2808828787
387 2808846615
388 2808850050
389 2808877392
390 2808893070
391 2808898867
392 2808916975
393 2812319478
394 2812333665
395 2812353986
396 2852639167
397 2862185841
398 2862385608
399 2862574574
400 2863409624
401 2863412452
402 2867437199
403 2877676663
404 2912723102
405 2912727218
406 2919035301
407 2919392060
408 2945917220
409 2945922526
410 2945956686
411 2946037184
412 2946071707
413 2946079254
414 2947232601
415 2953998437
416 2954673979
417 2954690011
418 2954711755
419 2954721675
420 2954740152
421 2954740585
422 2954758977
423 2954759597
424 2974305189
425 2990066497
426 8008564615
427 8008565821
428 8048409929

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

57

498

0.78

PF00324

AA_permease

Amino acid permease

61

514

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3l1l-assembly1.cif.gz_A-2 structure of arg-bound escherichia coli adic 0.8408 24 485
3l1l-assembly1.cif.gz_A-2 structure of arg-bound escherichia coli adic 0.8283 24 485
3ncy-assembly1.cif.gz_B x-ray crystal structure of an arginine agmatine antiporter (adic) in complex with a fab fragment 0.8192 26 469
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.8132 20 478
3ob6-assembly1.cif.gz_B structure of adic(n101a) in the open-to-out arg+ bound conformation 0.8108 16 485
ID Description Score Start End Superfamily
af_Q58596_3_366_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8672 26 448 1.20.1740.10
af_Q58596_3_366_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8628 26 448 1.20.1740.10
af_Q54KK3_597_1052_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.857 21 480 1.20.1740.10
af_P0AAF1_3_436_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.851 24 484 1.20.1740.10
af_Q2FYJ4_6_440_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8509 22 483 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A0M2K554-F1-model_v4 Amino acid permease 0.9382 30 482 GO:0005886
GO:0022857
AF-A0A7K2QPS1-F1-model_v4 Amino acid permease 0.9254 5 471 GO:0005886
GO:0022857
AF-A1RCG8-F1-model_v4 Putative Amino acid permease 0.9219 4 482 GO:0005886
GO:0022857
AF-A0A1M7PE78-F1-model_v4 Amino acid transporter 0.9092 30 483 GO:0016020
GO:0055085
AF-A0A117SYP4-F1-model_v4 Amino acid permease 0.9077 5 483 GO:0005886
GO:0022857

Map