F324826

General Info

Members Datasets Scaffolds Average Seq Length
214 130 428 324

Family's Representative Sequence

Representative Sequence 3300005334|Ga0068869_100195699|Ga0068869_1001956992
Length 357
Sequence MNKSRVHRAPRPLQRNRSESRARQIASSGALALLAVTIGGCGGWPSHPAGPQAARIAGEWWLFLCISTAVYVVVMAVLIAALLHAPRPRAELETELAPPVNRRFSYAVGAAVAISVALLFVLLISDFLTGRVVEAFGANDPLIIEIKGRQWWWEVSYADPIAGNRFTTANEIHIPIGRPVELLLTSADVIHSLWVPELHGKRDLIPAYGRRLRLQADRAGIYRGQCAEFCGYQHAKMSLLIIAEPEAVFAAWQNAQRQPARPPASESETRGQQVFLSTTCVMCHTVQGTPAGGKVAPDLTHLASRQTIASGAVPNTPGHLAAWILDPQSIKPGTNMPGNPMSPQDLQALLAYLRSLT

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
83 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
84 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
102 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
103 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
104 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
109 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
112 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
113 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
121 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
124 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
125 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
126 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
129 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
130 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.8
Nodule 0
Rhizoplane 1.87
Rhizosphere 93.46
Stem 0
Stem Tuber 0
Unclassified 7.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100195699 3300005334 Bacteria 1592
2 Ga0065715_10108393 3300005293 Bacteria 2721
3 Ga0070676_10057900 3300005328 Bacteria 2295
4 Ga0070676_10067282 3300005328 Bacteria 2142
5 Ga0070676_10189753 3300005328 Unclassified 1341
6 Ga0070683_100014885 3300005329 Bacteria 6819
7 Ga0070683_100094745 3300005329 Bacteria 2806
8 Ga0070670_100000509 3300005331 Bacteria 31134
9 Ga0070670_100040671 3300005331 Bacteria 3996
10 Ga0070670_100144841 3300005331 Bacteria 2055
11 Ga0070670_100185572 3300005331 Bacteria 1806
12 Ga0070670_100274201 3300005331 Unclassified 1472
13 Ga0070677_10002334 3300005333 Bacteria 6062
14 Ga0068868_100010347 3300005338 Bacteria 6748
15 Ga0070689_100347611 3300005340 Bacteria 1243
16 Ga0070692_10177512 3300005345 Bacteria 1232
17 Ga0070669_100033605 3300005353 Bacteria 3711
18 Ga0070675_100000729 3300005354 Bacteria 22903
19 Ga0070675_100068279 3300005354 Bacteria 2943
20 Ga0070671_100007299 3300005355 Bacteria 8829
21 Ga0070674_100012618 3300005356 Bacteria 5194
22 Ga0070674_100098757 3300005356 Bacteria 2123
23 Ga0070674_100166835 3300005356 Bacteria 1675
24 Ga0070673_100003201 3300005364 Bacteria 10143
25 Ga0070673_100046899 3300005364 Bacteria 3359
26 Ga0070673_100060972 3300005364 Bacteria 2991
27 Ga0070659_100087038 3300005366 Bacteria 2501
28 Ga0070711_100131308 3300005439 Bacteria 1866
29 Ga0070678_100003971 3300005456 Bacteria 8316
30 Ga0070662_100000208 3300005457 Bacteria 34180
31 Ga0070662_100279201 3300005457 Bacteria 1351
32 Ga0068867_100002650 3300005459 Bacteria 12627
33 Ga0070684_100088479 3300005535 Bacteria 2751
34 Ga0070684_100206216 3300005535 Bacteria 1791
35 Ga0070672_100001519 3300005543 Bacteria 14361
36 Ga0070672_100198922 3300005543 Bacteria 1675
37 Ga0070672_100242007 3300005543 Bacteria 1518
38 Ga0070665_100014628 3300005548 Bacteria 7874
39 Ga0070665_100097240 3300005548 Bacteria 2949
40 Ga0068855_100001230 3300005563 Bacteria 31780
41 Ga0068855_100411214 3300005563 Bacteria 1481
42 Ga0070664_100048184 3300005564 Bacteria 3601
43 Ga0070664_100067818 3300005564 Bacteria 3049
44 Ga0070664_100126220 3300005564 Bacteria 2245
45 Ga0068857_100077990 3300005577 Bacteria 2957
46 Ga0068864_100033419 3300005618 Bacteria 4373
47 Ga0068861_100038647 3300005719 Bacteria 3557
48 Ga0068861_100196520 3300005719 Bacteria 1690
49 Ga0068870_10021951 3300005840 Bacteria 3132
50 Ga0068863_100059689 3300005841 Bacteria 3609
51 Ga0068863_100209351 3300005841 Bacteria 1877
52 Ga0070716_100031816 3300006173 Bacteria 2873
53 Ga0070712_100055244 3300006175 Bacteria 2780
54 Ga0097621_100300374 3300006237 Bacteria 1418
55 Ga0068871_100035702 3300006358 Bacteria 3952
56 Ga0068871_100038008 3300006358 Bacteria 3841
57 Ga0068871_100160236 3300006358 Bacteria 1924
58 Ga0068871_100302926 3300006358 Bacteria 1403
59 Ga0068865_100064431 3300006881 Bacteria 2579
60 Ga0075436_100005396 3300006914 Bacteria 8801
61 Ga0105240_10027658 3300009093 Bacteria 7422
62 Ga0114129_10129158 3300009147 Bacteria 3473
63 Ga0105248_10247779 3300009177 Bacteria 2005
64 Ga0157371_10176576 3300013102 Bacteria 1527
65 Ga0157374_10240961 3300013296 Bacteria 1778
66 Ga0163162_10090278 3300013306 Unclassified 3145
67 Ga0157372_10360807 3300013307 Bacteria 1693
68 Ga0157375_10094815 3300013308 Bacteria 3054
69 Ga0157375_10462012 3300013308 Bacteria 1435
70 Ga0163163_10199699 3300014325 Bacteria 2048
71 Ga0157376_10133859 3300014969 Unclassified 2215
72 Ga0157376_10303896 3300014969 Bacteria 1511
73 Ga0163161_10032733 3300017792 Bacteria 3714
74 Ga0213876_10035767 3300021384 Bacteria 2619
75 Ga0207697_10011557 3300025315 Bacteria 3732
76 Ga0207656_10093763 3300025321 Bacteria 1367
77 Ga0207645_10102500 3300025907 Bacteria 1847
78 Ga0207645_10104326 3300025907 Bacteria 1831
79 Ga0207645_10121234 3300025907 Bacteria 1697
80 Ga0207643_10033687 3300025908 Bacteria 2866
81 Ga0207695_10061602 3300025913 Bacteria 3877
82 Ga0207662_10071196 3300025918 Bacteria 2105
83 Ga0207681_10018174 3300025923 Bacteria 4427
84 Ga0207681_10041538 3300025923 Bacteria 3067
85 Ga0207681_10135055 3300025923 Bacteria 1829
86 Ga0207650_10000563 3300025925 Bacteria 30069
87 Ga0207650_10009475 3300025925 Bacteria 6653
88 Ga0207650_10167144 3300025925 Bacteria 1746
89 Ga0207659_10001239 3300025926 Bacteria 15296
90 Ga0207644_10012070 3300025931 Bacteria 5729
91 Ga0207644_10109274 3300025931 Bacteria 2089
92 Ga0207690_10044549 3300025932 Bacteria 2925
93 Ga0207706_10000157 3300025933 Bacteria 75435
94 Ga0207670_10293461 3300025936 Bacteria 1271
95 Ga0207669_10052172 3300025937 Unclassified 2455
96 Ga0207704_10214832 3300025938 Bacteria 1418
97 Ga0207665_10001561 3300025939 Bacteria 15441
98 Ga0207691_10001263 3300025940 Bacteria 25342
99 Ga0207691_10032686 3300025940 Bacteria 4850
100 Ga0207691_10040026 3300025940 Bacteria 4333
101 Ga0207691_10114126 3300025940 Bacteria 2400
102 Ga0207661_10127793 3300025944 Bacteria 2173
103 Ga0207679_10042427 3300025945 Bacteria 3269
104 Ga0207679_10065167 3300025945 Bacteria 2725
105 Ga0207679_10211292 3300025945 Bacteria 1627
106 Ga0207667_10002232 3300025949 Bacteria 24328
107 Ga0207651_10009932 3300025960 Bacteria 5242
108 Ga0207651_10015837 3300025960 Bacteria 4396
109 Ga0207658_10097667 3300025986 Bacteria 2294
110 Ga0207658_10243158 3300025986 Bacteria 1526
111 Ga0207658_10270470 3300025986 Bacteria 1452
112 Ga0207677_10025195 3300026023 Bacteria 3707
113 Ga0207678_10150107 3300026067 Bacteria 1989
114 Ga0207702_10302769 3300026078 Bacteria 1517
115 Ga0207641_10070529 3300026088 Bacteria 3003
116 Ga0207648_10026691 3300026089 Bacteria 5130
117 Ga0207648_10127563 3300026089 Bacteria 2238
118 Ga0207648_10339935 3300026089 Bacteria 1352
119 Ga0207676_10015581 3300026095 Bacteria 5488
120 Ga0207676_10056962 3300026095 Bacteria 3076
121 Ga0207674_10009063 3300026116 Bacteria 11427
122 Ga0207675_100065725 3300026118 Bacteria 3390
123 Ga0207675_100236818 3300026118 Bacteria 1763
124 Ga0207675_100260309 3300026118 Bacteria 1681
125 Ga0207683_10011622 3300026121 Bacteria 7515
126 Ga0207698_10351408 3300026142 Bacteria 1393
127 Ga0209971_1004623 3300027682 Bacteria 3265
128 Ga0209974_10001510 3300027876 Bacteria 8451
129 Ga0307408_100096380 3300031548 Bacteria 2244
130 Ga0307408_100101847 3300031548 Bacteria 2189
131 Ga0307516_10006017 3300031730 Bacteria 14341
132 Ga0307405_10024878 3300031731 Bacteria 3429
133 Ga0307405_10026339 3300031731 Bacteria 3353
134 Ga0307405_10030569 3300031731 Bacteria 3159
135 Ga0307405_10102216 3300031731 Bacteria 1924
136 Ga0307405_10111931 3300031731 Unclassified 1851
137 Ga0307405_10175017 3300031731 Bacteria 1535
138 Ga0307413_10001083 3300031824 Bacteria 9947
139 Ga0307413_10040013 3300031824 Bacteria 2732
140 Ga0307413_10122995 3300031824 Bacteria 1761
141 Ga0307410_10002521 3300031852 Bacteria 8854
142 Ga0307410_10020546 3300031852 Bacteria 4041
143 Ga0307410_10048770 3300031852 Bacteria 2839
144 Ga0307410_10064566 3300031852 Bacteria 2516
145 Ga0307406_10001895 3300031901 Bacteria 11400
146 Ga0307406_10031972 3300031901 Bacteria 3208
147 Ga0307406_10059591 3300031901 Unclassified 2458
148 Ga0307406_10089119 3300031901 Bacteria 2072
149 Ga0307407_10001119 3300031903 Bacteria 9376
150 Ga0307407_10005742 3300031903 Bacteria 5422
151 Ga0307407_10038963 3300031903 Bacteria 2639
152 Ga0307407_10052332 3300031903 Unclassified 2344
153 Ga0307407_10107201 3300031903 Unclassified 1747
154 Ga0307412_10015921 3300031911 Bacteria 4467
155 Ga0307412_10092809 3300031911 Bacteria 2116
156 Ga0307412_10095851 3300031911 Bacteria 2087
157 Ga0307412_10114279 3300031911 Bacteria 1933
158 Ga0307412_10167353 3300031911 Unclassified 1640
159 Ga0307409_100004146 3300031995 Bacteria 8064
160 Ga0307409_100024735 3300031995 Bacteria 4195
161 Ga0307409_100108639 3300031995 Bacteria 2320
162 Ga0307409_100371439 3300031995 Unclassified 1356
163 Ga0307409_100476660 3300031995 Bacteria 1210
164 Ga0307416_100000945 3300032002 Bacteria 15381
165 Ga0307416_100039096 3300032002 Bacteria 3669
166 Ga0307416_100049342 3300032002 Bacteria 3346
167 Ga0307416_100153030 3300032002 Bacteria 2119
168 Ga0307414_10027297 3300032004 Bacteria 3688
169 Ga0307414_10161693 3300032004 Unclassified 1779
170 Ga0307411_10015227 3300032005 Bacteria 4313
171 Ga0307411_10225744 3300032005 Unclassified 1456
172 Ga0307415_100017630 3300032126 Bacteria 4286
173 Ga0307415_100037933 3300032126 Bacteria 3171
174 Ga0307415_100041298 3300032126 Unclassified 3062
175 Ga0395899_0063186 3300037312 Bacteria 2724
176 Ga0395900_0016555 3300037418 Bacteria 7522
177 Ga0395900_0135512 3300037418 Bacteria 2523
178 Ga0395898_0028547 3300037466 Bacteria 5591
179 Ga0395905_0040526 3300037471 Bacteria 4369
180 Ga0395901_0005880 3300038443 Bacteria 12413
181 Ga0436365_0123567 3300039437 Bacteria 19259
182 Ga0436365_1337354 3300039437 Bacteria 2292
183 Ga0466961_0000480 3300044693 Bacteria 25359
184 Ga0466971_0104854 3300044719 Bacteria 1301
185 Ga0466968_0162342 3300044735 Bacteria 1032
186 Ga0466970_0007731 3300044765 Bacteria 5393
187 Ga0466957_0050195 3300044842 Bacteria 2538
188 Ga0466959_0109947 3300045049 Bacteria 1968
189 Ga0466967_0704841 3300045976 Bacteria 1000
190 Ga0495629_0040971 3300046459 Bacteria 3259
191 Ga0495632_0046090 3300046519 Bacteria 2168
192 Ga0495643_0123041 3300046522 Unclassified 1309
193 Ga0495586_0054264 3300046535 Bacteria 2172
194 Ga0495621_0072347 3300046539 Bacteria 1272
195 Ga0495669_0015323 3300046684 Bacteria 3283
196 Ga0495687_044197 3300047443 Bacteria 1938
197 Ga0496108_0022882 3300048911 Bacteria 5142
198 Ga0496109_0114854 3300048912 Bacteria 2505
199 Ga0496109_0410565 3300048912 Bacteria 1279
200 Ga0496110_0187923 3300048913 Bacteria 1876
201 Ga0501033_0101929 3300049570 Bacteria 2094
202 Ga0501034_0001098 3300049571 Bacteria 38043
203 Ga0501257_013035 3300049686 Unclassified 1905
204 Ga0501225_0022790 3300049705 Bacteria 1729
205 Ga0501080_0004467 3300049742 Bacteria 12450
206 Ga0501083_0372465 3300049744 Bacteria 929
207 nmdc:mga08x19_25527_c1 3300050514 Bacteria 3681
208 Ga0500583_0003644 3300053092 Bacteria 4888
209 Ga0500556_0000792 3300053104 Bacteria 18540
210 Ga0500616_0000016 3300053153 Bacteria 627087
211 Ga0500622_0003368 3300053156 Bacteria 10755
212 Ga0500622_0005869 3300053156 Bacteria 7258
213 Ga0500637_0183549 3300053178 Unclassified 1198
214 Ga0501084_0608332 3300054114 Bacteria 923
215 Ga0068869_100195699
216 Ga0065715_10108393
217 Ga0070676_10057900
218 Ga0070676_10067282
219 Ga0070676_10189753
220 Ga0070683_100014885
221 Ga0070683_100094745
222 Ga0070670_100000509
223 Ga0070670_100040671
224 Ga0070670_100144841
225 Ga0070670_100185572
226 Ga0070670_100274201
227 Ga0070677_10002334
228 Ga0068868_100010347
229 Ga0070689_100347611
230 Ga0070692_10177512
231 Ga0070669_100033605
232 Ga0070675_100000729
233 Ga0070675_100068279
234 Ga0070671_100007299
235 Ga0070674_100012618
236 Ga0070674_100098757
237 Ga0070674_100166835
238 Ga0070673_100003201
239 Ga0070673_100046899
240 Ga0070673_100060972
241 Ga0070659_100087038
242 Ga0070711_100131308
243 Ga0070678_100003971
244 Ga0070662_100000208
245 Ga0070662_100279201
246 Ga0068867_100002650
247 Ga0070684_100088479
248 Ga0070684_100206216
249 Ga0070672_100001519
250 Ga0070672_100198922
251 Ga0070672_100242007
252 Ga0070665_100014628
253 Ga0070665_100097240
254 Ga0068855_100001230
255 Ga0068855_100411214
256 Ga0070664_100048184
257 Ga0070664_100067818
258 Ga0070664_100126220
259 Ga0068857_100077990
260 Ga0068864_100033419
261 Ga0068861_100038647
262 Ga0068861_100196520
263 Ga0068870_10021951
264 Ga0068863_100059689
265 Ga0068863_100209351
266 Ga0070716_100031816
267 Ga0070712_100055244
268 Ga0097621_100300374
269 Ga0068871_100035702
270 Ga0068871_100038008
271 Ga0068871_100160236
272 Ga0068871_100302926
273 Ga0068865_100064431
274 Ga0075436_100005396
275 Ga0105240_10027658
276 Ga0114129_10129158
277 Ga0105248_10247779
278 Ga0157371_10176576
279 Ga0157374_10240961
280 Ga0163162_10090278
281 Ga0157372_10360807
282 Ga0157375_10094815
283 Ga0157375_10462012
284 Ga0163163_10199699
285 Ga0157376_10133859
286 Ga0157376_10303896
287 Ga0163161_10032733
288 Ga0213876_10035767
289 Ga0207697_10011557
290 Ga0207656_10093763
291 Ga0207645_10102500
292 Ga0207645_10104326
293 Ga0207645_10121234
294 Ga0207643_10033687
295 Ga0207695_10061602
296 Ga0207662_10071196
297 Ga0207681_10018174
298 Ga0207681_10041538
299 Ga0207681_10135055
300 Ga0207650_10000563
301 Ga0207650_10009475
302 Ga0207650_10167144
303 Ga0207659_10001239
304 Ga0207644_10012070
305 Ga0207644_10109274
306 Ga0207690_10044549
307 Ga0207706_10000157
308 Ga0207670_10293461
309 Ga0207669_10052172
310 Ga0207704_10214832
311 Ga0207665_10001561
312 Ga0207691_10001263
313 Ga0207691_10032686
314 Ga0207691_10040026
315 Ga0207691_10114126
316 Ga0207661_10127793
317 Ga0207679_10042427
318 Ga0207679_10065167
319 Ga0207679_10211292
320 Ga0207667_10002232
321 Ga0207651_10009932
322 Ga0207651_10015837
323 Ga0207658_10097667
324 Ga0207658_10243158
325 Ga0207658_10270470
326 Ga0207677_10025195
327 Ga0207678_10150107
328 Ga0207702_10302769
329 Ga0207641_10070529
330 Ga0207648_10026691
331 Ga0207648_10127563
332 Ga0207648_10339935
333 Ga0207676_10015581
334 Ga0207676_10056962
335 Ga0207674_10009063
336 Ga0207675_100065725
337 Ga0207675_100236818
338 Ga0207675_100260309
339 Ga0207683_10011622
340 Ga0207698_10351408
341 Ga0209971_1004623
342 Ga0209974_10001510
343 Ga0307408_100096380
344 Ga0307408_100101847
345 Ga0307516_10006017
346 Ga0307405_10024878
347 Ga0307405_10026339
348 Ga0307405_10030569
349 Ga0307405_10102216
350 Ga0307405_10111931
351 Ga0307405_10175017
352 Ga0307413_10001083
353 Ga0307413_10040013
354 Ga0307413_10122995
355 Ga0307410_10002521
356 Ga0307410_10020546
357 Ga0307410_10048770
358 Ga0307410_10064566
359 Ga0307406_10001895
360 Ga0307406_10031972
361 Ga0307406_10059591
362 Ga0307406_10089119
363 Ga0307407_10001119
364 Ga0307407_10005742
365 Ga0307407_10038963
366 Ga0307407_10052332
367 Ga0307407_10107201
368 Ga0307412_10015921
369 Ga0307412_10092809
370 Ga0307412_10095851
371 Ga0307412_10114279
372 Ga0307412_10167353
373 Ga0307409_100004146
374 Ga0307409_100024735
375 Ga0307409_100108639
376 Ga0307409_100371439
377 Ga0307409_100476660
378 Ga0307416_100000945
379 Ga0307416_100039096
380 Ga0307416_100049342
381 Ga0307416_100153030
382 Ga0307414_10027297
383 Ga0307414_10161693
384 Ga0307411_10015227
385 Ga0307411_10225744
386 Ga0307415_100017630
387 Ga0307415_100037933
388 Ga0307415_100041298
389 Ga0395899_0063186
390 Ga0395900_0016555
391 Ga0395900_0135512
392 Ga0395898_0028547
393 Ga0395905_0040526
394 Ga0395901_0005880
395 Ga0436365_0123567
396 Ga0436365_1337354
397 Ga0466961_0000480
398 Ga0466971_0104854
399 Ga0466968_0162342
400 Ga0466970_0007731
401 Ga0466957_0050195
402 Ga0466959_0109947
403 Ga0466967_0704841
404 Ga0495629_0040971
405 Ga0495632_0046090
406 Ga0495643_0123041
407 Ga0495586_0054264
408 Ga0495621_0072347
409 Ga0495669_0015323
410 Ga0495687_044197
411 Ga0496108_0022882
412 Ga0496109_0114854
413 Ga0496109_0410565
414 Ga0496110_0187923
415 Ga0501033_0101929
416 Ga0501034_0001098
417 Ga0501257_013035
418 Ga0501225_0022790
419 Ga0501080_0004467
420 Ga0501083_0372465
421 nmdc:mga08x19_25527_c1
422 Ga0500583_0003644
423 Ga0500556_0000792
424 Ga0500616_0000016
425 Ga0500622_0003368
426 Ga0500622_0005869
427 Ga0500637_0183549
428 Ga0501084_0608332

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00116

COX2

Cytochrome C oxidase subunit II, periplasmic domain

162

244

0.94

PF00034

Cytochrom_C

Cytochrome c

268

357

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8bqs-assembly1.cif.gz_Db cryo-em structure of the i-ii-iii2-iv2 respiratory supercomplex from tetrahymena thermophila 0.9117 112 196
8gym-assembly1.cif.gz_c2 cryo-em structure of tetrahymena thermophila respiratory mega-complex mc iv2+(i+iii2+ii)2 0.9112 112 194
7w5z-assembly1.cif.gz_c2 cryo-em structure of tetrahymena thermophila mitochondrial complex iv, composite dimer model 0.9111 112 195
4w9z-assembly1.cif.gz_A crystal structure of the periplasmic domain of subunit ii of cytochrome oxidase (coxb) of bradyrhizobium japonicum 0.9074 79 198
6ptt-assembly2.cif.gz_B soluble model of arabidopsis thaliana cua (tt3lat) 0.897 79 185
ID Description Score Start End Superfamily
af_Q8I6V2_60_165_2.60.40.420 Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - 0.9454 112 192 2.60.40.420
2yevE02 Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - 0.922 79 298 2.60.40.420
af_A0A2P2CLF0_113_253_2.60.40.420 Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - 0.9063 81 199 2.60.40.420
3hb3B01 Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - 0.9001 79 199 2.60.40.420
5wehH02 Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - 0.8997 83 195 2.60.40.420
ID Description Score Start End GO Terms
AF-A0A529M468-F1-model_v4 C-type cytochrome 0.9863 89 298 GO:0004129
GO:0005507
GO:0016020
GO:0020037
GO:0042773
AF-A0A2V8GJU3-F1-model_v4 Cytochrome c oxidase subunit II 0.9816 137 298 GO:0004129
GO:0005507
GO:0016020
GO:0020037
GO:0042773
AF-A0A6L3N782-F1-model_v4 Cytochrome c 0.9816 212 298 GO:0009055
GO:0020037
GO:0046872
AF-A0A435FK68-F1-model_v4 Cytochrome c 0.9801 191 298 GO:0009055
GO:0020037
GO:0046872
AF-A0A7C3J855-F1-model_v4 C-type cytochrome 0.9795 182 298 GO:0009055
GO:0020037
GO:0046872

Map