F324651
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 213 | 140 | 186 | 387 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2966924647|2966926070 |
| Length | 422 |
| Sequence | HLSLTDFRNYTSAEVSLARGPNLFVGSNGQGKTNLVESLGYLSSLGSHRVSSDSALIRQGRDSAVVRARLLADERELLAEVQINRSSPNRAQVNRGAIKPRELPRYFTSVLFAPEDLALVRGEPSGRRRFLDELLVARSPRFAGVQTDYDRVLRQRNTLLKSARASGVKAGQLGTLDIWDERLVALGSELVVARDRLAADLAPEVARAYAAVAGADHAAHLSTVLSIRGATPDDETTAAEGPTESIPADQVPDVFRQALARVRPTELERGLTLVGPHRDDLFLSLNGLPARGYASHGESWSFALALKLASAAVVRVDSPTGDPVIVLDDVFAELDVSRRERLADAVADYEQVLITAAVEGDVPSRLKAHTVRIAKGTILDDAPAVDGPGDEAVVTRVAGDQGPGDEGAGDEGPGDAGAEEAR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2585428094 | Herbiconiux sp. YR403 | Isolate | Rhizosphere |
| 2 | 2643221578 | Streptomyces sp. Root63 | Isolate | Unclassified |
| 3 | 2643221632 | Leifsonia sp. Root112D2 | Isolate | Unclassified |
| 4 | 2643221649 | Leifsonia sp. Root4 | Isolate | Unclassified |
| 5 | 2767802112 | Streptomyces avicenniae NRRL B-24776 | Isolate | Rhizosphere |
| 6 | 2775506925 | Saccharopolyspora phatthalungensis NRRL B-24798 | Isolate | Rhizosphere |
| 7 | 2844841374 | Leifsonia soli DSM 23871 | Isolate | Rhizosphere |
| 8 | 2852643534 | Leifsonia sp. AK011 | Isolate | Rhizosphere |
| 9 | 2857733635 | Salinibacterium sp. R-73062 | Isolate | Unclassified |
| 10 | 2857737099 | Lysinimonas sp. R-73066 | Isolate | Unclassified |
| 11 | 2862705112 | Streptomyces triticirhizae NEAU-YY642 | Isolate | Rhizosphere |
| 12 | 2862993130 | Planctomonas deserti 13S1-3 v2 | Isolate | Rhizosphere |
| 13 | 2863067949 | Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) | Isolate | Rhizosphere |
| 14 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 15 | 2870622029 | Conyzicola lurida DSM 105784 | Isolate | Unclassified |
| 16 | 2919055335 | Leifsonia sp. 1010 | Isolate | Rhizosphere |
| 17 | 2919523602 | Leifsonia shinshuensis 3821 | Isolate | Unclassified |
| 18 | 2928153084 | Leifsonia sp. 563 | Isolate | Unclassified |
| 19 | 2939657138 | Conyzicola nivalis 2857 | Isolate | Rhizosphere |
| 20 | 2939660829 | Mycetocola sp. 2940 | Isolate | Rhizosphere |
| 21 | 2946045630 | Streptomyces sp. W4I9-2 | Isolate | Rhizosphere |
| 22 | 2966921586 | Rathayibacter agropyri 617 | Isolate | Rhizosphere |
| 23 | 2966924647 | Frigoribacterium sp. 2355 | Isolate | Rhizosphere |
| 24 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 25 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 26 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 27 | 3300003841 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 28 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 29 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 31 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 37 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 38 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 40 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 41 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 42 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 43 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 44 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 45 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 46 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 47 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 48 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 93 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 94 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 95 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 96 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 97 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 98 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 99 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 100 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 101 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 102 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 103 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 104 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 105 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 106 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 107 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 111 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 112 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 113 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 114 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 115 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 116 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 130 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 131 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 132 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 133 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 134 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 135 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 136 | 3300053155 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere | Metagenome | Endosphere |
| 137 | 8008485437 | Streptomyces mimosae 3MP-10 | Isolate | Unclassified |
| 138 | 8025524527 | Streptomyces sp. 3MP-14 | Isolate | Unclassified |
| 139 | 8045830549 | Microbacterium yannicii DSM 23203 | Isolate | Unclassified |
| 140 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.38 |
| Metatranscriptomes | 0.94 |
| Isolates | 12.68 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 13.62 |
| Nodule | 0 |
| Rhizoplane | 0.94 |
| Rhizosphere | 74.18 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 11.27 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0006562J51391_1007922 | 3300003578 | Bacteria | 9000 |
| 2 | Ga0006562J51391_1007923 | 3300003578 | Bacteria | 4170 |
| 3 | Ga0055539_1000014 | 3300003752 | Bacteria | 381086 |
| 4 | Ga0055533_1000002 | 3300003756 | Bacteria | 1196393 |
| 5 | Ga0055541_1000497 | 3300003841 | Bacteria | 11039 |
| 6 | Ga0065714_10010144 | 3300005288 | Bacteria | 4002 |
| 7 | Ga0070658_10000065 | 3300005327 | Bacteria | 104621 |
| 8 | Ga0070658_10001447 | 3300005327 | Bacteria | 20259 |
| 9 | Ga0070658_10011720 | 3300005327 | Bacteria | 7034 |
| 10 | Ga0070658_10016063 | 3300005327 | Bacteria | 5986 |
| 11 | Ga0068868_100036222 | 3300005338 | Bacteria | 3818 |
| 12 | Ga0068868_100096583 | 3300005338 | Bacteria | 2387 |
| 13 | Ga0070660_100043651 | 3300005339 | Bacteria | 3427 |
| 14 | Ga0070660_100191452 | 3300005339 | Bacteria | 1657 |
| 15 | Ga0070661_100065973 | 3300005344 | Bacteria | 2659 |
| 16 | Ga0070671_100091858 | 3300005355 | Bacteria | 2543 |
| 17 | Ga0070659_100003355 | 3300005366 | Bacteria | 11392 |
| 18 | Ga0070667_100047298 | 3300005367 | Bacteria | 3619 |
| 19 | Ga0070710_10006814 | 3300005437 | Bacteria | 5510 |
| 20 | Ga0068853_100160966 | 3300005539 | Bacteria | 2026 |
| 21 | Ga0068853_100302278 | 3300005539 | Bacteria | 1479 |
| 22 | Ga0070672_100019574 | 3300005543 | Bacteria | 4916 |
| 23 | Ga0068855_100001284 | 3300005563 | Bacteria | 31118 |
| 24 | Ga0068855_100241435 | 3300005563 | Bacteria | 2018 |
| 25 | Ga0068855_100365086 | 3300005563 | Bacteria | 1588 |
| 26 | Ga0068857_100005100 | 3300005577 | Bacteria | 11165 |
| 27 | Ga0068856_100054207 | 3300005614 | Bacteria | 3954 |
| 28 | Ga0068852_100008302 | 3300005616 | Bacteria | 7644 |
| 29 | Ga0068852_100033118 | 3300005616 | Bacteria | 4287 |
| 30 | Ga0068859_100123444 | 3300005617 | Bacteria | 2657 |
| 31 | Ga0068864_100024877 | 3300005618 | Bacteria | 5037 |
| 32 | Ga0068851_10000053 | 3300005834 | Bacteria | 71192 |
| 33 | Ga0068863_100306786 | 3300005841 | Bacteria | 1540 |
| 34 | Ga0068863_100365254 | 3300005841 | Bacteria | 1408 |
| 35 | Ga0068858_100000176 | 3300005842 | Bacteria | 68056 |
| 36 | Ga0097620_100123446 | 3300006931 | Bacteria | 2657 |
| 37 | Ga0105240_10005148 | 3300009093 | Bacteria | 19564 |
| 38 | Ga0105240_10065741 | 3300009093 | Bacteria | 4500 |
| 39 | Ga0105240_10117013 | 3300009093 | Bacteria | 3215 |
| 40 | Ga0105245_10025509 | 3300009098 | Bacteria | 5199 |
| 41 | Ga0105245_10053498 | 3300009098 | Bacteria | 3624 |
| 42 | Ga0105241_10089329 | 3300009174 | Bacteria | 2427 |
| 43 | Ga0105248_10000897 | 3300009177 | Bacteria | 33319 |
| 44 | Ga0105248_10029387 | 3300009177 | Bacteria | 6131 |
| 45 | Ga0105237_10004763 | 3300009545 | Bacteria | 15599 |
| 46 | Ga0105237_10014141 | 3300009545 | Bacteria | 8353 |
| 47 | Ga0105237_10046388 | 3300009545 | Bacteria | 4371 |
| 48 | Ga0105238_10000476 | 3300009551 | Bacteria | 42016 |
| 49 | Ga0105238_10154528 | 3300009551 | Bacteria | 2269 |
| 50 | Ga0105239_10215476 | 3300010375 | Bacteria | 2153 |
| 51 | Ga0105239_10326557 | 3300010375 | Bacteria | 1730 |
| 52 | Ga0105239_10420718 | 3300010375 | Bacteria | 1513 |
| 53 | Ga0157371_10022860 | 3300013102 | Bacteria | 4574 |
| 54 | Ga0157369_10000615 | 3300013105 | Bacteria | 46292 |
| 55 | Ga0157369_10083571 | 3300013105 | Bacteria | 3414 |
| 56 | Ga0157369_10170042 | 3300013105 | Bacteria | 2297 |
| 57 | Ga0157374_10034123 | 3300013296 | Bacteria | 4646 |
| 58 | Ga0157372_10124688 | 3300013307 | Bacteria | 2961 |
| 59 | Ga0163163_10186156 | 3300014325 | Bacteria | 2124 |
| 60 | Ga0157379_10068421 | 3300014968 | Bacteria | 3175 |
| 61 | Ga0209566_100056 | 3300025225 | Bacteria | 209595 |
| 62 | Ga0209674_100001 | 3300025226 | Bacteria | 4013750 |
| 63 | Ga0209563_100001 | 3300025230 | Bacteria | 4013775 |
| 64 | Ga0209677_100001 | 3300025253 | Bacteria | 4013787 |
| 65 | Ga0209677_100271 | 3300025253 | Bacteria | 34642 |
| 66 | Ga0209148_1001014 | 3300025254 | Bacteria | 17716 |
| 67 | Ga0207656_10000001 | 3300025321 | Bacteria | 1323684 |
| 68 | Ga0207692_10068770 | 3300025898 | Bacteria | 1858 |
| 69 | Ga0207647_10051240 | 3300025904 | Bacteria | 2552 |
| 70 | Ga0207705_10000001 | 3300025909 | Bacteria | 2061880 |
| 71 | Ga0207705_10009264 | 3300025909 | Bacteria | 7161 |
| 72 | Ga0207705_10010879 | 3300025909 | Bacteria | 6606 |
| 73 | Ga0207654_10000001 | 3300025911 | Bacteria | 1816198 |
| 74 | Ga0207695_10001399 | 3300025913 | Bacteria | 40720 |
| 75 | Ga0207695_10002309 | 3300025913 | Bacteria | 28441 |
| 76 | Ga0207695_10002481 | 3300025913 | Bacteria | 27163 |
| 77 | Ga0207671_10000001 | 3300025914 | Bacteria | 1318881 |
| 78 | Ga0207671_10003504 | 3300025914 | Bacteria | 15592 |
| 79 | Ga0207671_10026178 | 3300025914 | Bacteria | 4373 |
| 80 | Ga0207657_10007809 | 3300025919 | Bacteria | 10918 |
| 81 | Ga0207657_10061465 | 3300025919 | Bacteria | 3221 |
| 82 | Ga0207657_10132863 | 3300025919 | Bacteria | 2038 |
| 83 | Ga0207649_10140962 | 3300025920 | Bacteria | 1649 |
| 84 | Ga0207694_10000019 | 3300025924 | Bacteria | 312382 |
| 85 | Ga0207687_10028346 | 3300025927 | Bacteria | 3762 |
| 86 | Ga0207687_10030424 | 3300025927 | Bacteria | 3640 |
| 87 | Ga0207690_10002616 | 3300025932 | Bacteria | 10843 |
| 88 | Ga0207691_10023123 | 3300025940 | Bacteria | 5853 |
| 89 | Ga0207711_10000405 | 3300025941 | Bacteria | 45662 |
| 90 | Ga0207711_10016898 | 3300025941 | Bacteria | 6061 |
| 91 | Ga0207667_10000498 | 3300025949 | Bacteria | 51911 |
| 92 | Ga0207667_10088387 | 3300025949 | Bacteria | 3205 |
| 93 | Ga0207667_10355980 | 3300025949 | Bacteria | 1493 |
| 94 | Ga0207640_10179266 | 3300025981 | Bacteria | 1587 |
| 95 | Ga0207658_10224094 | 3300025986 | Bacteria | 1583 |
| 96 | Ga0207703_10000121 | 3300026035 | Bacteria | 94523 |
| 97 | Ga0207639_10025918 | 3300026041 | Bacteria | 4255 |
| 98 | Ga0207678_10043979 | 3300026067 | Bacteria | 3865 |
| 99 | Ga0207702_10141395 | 3300026078 | Bacteria | 2178 |
| 100 | Ga0207702_10158866 | 3300026078 | Bacteria | 2063 |
| 101 | Ga0207641_10022978 | 3300026088 | Bacteria | 5137 |
| 102 | Ga0207676_10027237 | 3300026095 | Bacteria | 4256 |
| 103 | Ga0207674_10016735 | 3300026116 | Bacteria | 8014 |
| 104 | Ga0207674_10088286 | 3300026116 | Bacteria | 3094 |
| 105 | Ga0207698_10008089 | 3300026142 | Bacteria | 6631 |
| 106 | Ga0207698_10023507 | 3300026142 | Bacteria | 4307 |
| 107 | Ga0307513_10122214 | 3300031456 | Bacteria | 2567 |
| 108 | Ga0307514_10003701 | 3300031649 | Bacteria | 14456 |
| 109 | Ga0307413_10003169 | 3300031824 | Bacteria | 6873 |
| 110 | Ga0395899_0007189 | 3300037312 | Bacteria | 8617 |
| 111 | Ga0395899_0014050 | 3300037312 | Bacteria | 6112 |
| 112 | Ga0395900_0010357 | 3300037418 | Bacteria | 9539 |
| 113 | Ga0395900_0193143 | 3300037418 | Bacteria | 2064 |
| 114 | Ga0395900_0224186 | 3300037418 | Bacteria | 1893 |
| 115 | Ga0395898_0022590 | 3300037466 | Bacteria | 6369 |
| 116 | Ga0395898_0152783 | 3300037466 | Bacteria | 2208 |
| 117 | Ga0395905_0040383 | 3300037471 | Bacteria | 4377 |
| 118 | Ga0395901_0018987 | 3300038443 | Bacteria | 7028 |
| 119 | Ga0395901_0118772 | 3300038443 | Bacteria | 2778 |
| 120 | Ga0451793_0123572 | 3300041452 | Bacteria | 3753 |
| 121 | Ga0451793_1684741 | 3300041452 | Bacteria | 1880 |
| 122 | Ga0439462_0014884 | 3300042015 | Bacteria | 2002 |
| 123 | Ga0466972_0014295 | 3300044658 | Bacteria | 3977 |
| 124 | Ga0466965_0000004 | 3300044683 | Bacteria | 229348 |
| 125 | Ga0466961_0022880 | 3300044693 | Bacteria | 4020 |
| 126 | Ga0466959_0042693 | 3300045049 | Bacteria | 3344 |
| 127 | Ga0466959_0094957 | 3300045049 | Bacteria | 2139 |
| 128 | Ga0466967_0008850 | 3300045976 | Bacteria | 7422 |
| 129 | Ga0466967_0012048 | 3300045976 | Bacteria | 6591 |
| 130 | Ga0495590_0000502 | 3300046457 | Bacteria | 19199 |
| 131 | Ga0495650_0000211 | 3300046471 | Bacteria | 125248 |
| 132 | Ga0495656_0086657 | 3300046615 | Bacteria | 1425 |
| 133 | Ga0496117_0027272 | 3300048920 | Bacteria | 4453 |
| 134 | Ga0496119_0043948 | 3300048922 | Bacteria | 2819 |
| 135 | Ga0496120_0008003 | 3300048923 | Bacteria | 7779 |
| 136 | Ga0496122_0002555 | 3300048925 | Bacteria | 25570 |
| 137 | Ga0496123_0013320 | 3300048926 | Bacteria | 6918 |
| 138 | Ga0496126_0000007 | 3300048929 | Bacteria | 787364 |
| 139 | Ga0496126_0014498 | 3300048929 | Bacteria | 7966 |
| 140 | Ga0496126_0033914 | 3300048929 | Bacteria | 4801 |
| 141 | Ga0501031_0112420 | 3300049568 | Bacteria | 1778 |
| 142 | Ga0501032_0046636 | 3300049569 | Bacteria | 2928 |
| 143 | Ga0501032_0117498 | 3300049569 | Bacteria | 1758 |
| 144 | Ga0501033_0021907 | 3300049570 | Bacteria | 4822 |
| 145 | Ga0501033_0036965 | 3300049570 | Bacteria | 3657 |
| 146 | Ga0501034_0024669 | 3300049571 | Bacteria | 6115 |
| 147 | Ga0501034_0043843 | 3300049571 | Bacteria | 4524 |
| 148 | Ga0501034_0046529 | 3300049571 | Bacteria | 4383 |
| 149 | Ga0501034_0051405 | 3300049571 | Bacteria | 4155 |
| 150 | Ga0501034_0154956 | 3300049571 | Bacteria | 2266 |
| 151 | Ga0501034_0203666 | 3300049571 | Bacteria | 1936 |
| 152 | Ga0501037_0020980 | 3300049573 | Bacteria | 4827 |
| 153 | Ga0501037_0028084 | 3300049573 | Bacteria | 4155 |
| 154 | Ga0501038_0023477 | 3300049574 | Bacteria | 5512 |
| 155 | Ga0501038_0065155 | 3300049574 | Bacteria | 3105 |
| 156 | Ga0501038_0069665 | 3300049574 | Bacteria | 2987 |
| 157 | Ga0501043_0161048 | 3300049579 | Bacteria | 1753 |
| 158 | Ga0501043_0193641 | 3300049579 | Bacteria | 1580 |
| 159 | Ga0501047_0114062 | 3300049581 | Bacteria | 2584 |
| 160 | Ga0501070_0035396 | 3300049586 | Bacteria | 4172 |
| 161 | Ga0501070_0100991 | 3300049586 | Bacteria | 2386 |
| 162 | Ga0501071_0009790 | 3300049587 | Bacteria | 6396 |
| 163 | Ga0501072_0122451 | 3300049588 | Bacteria | 2072 |
| 164 | Ga0501073_0045048 | 3300049589 | Bacteria | 3108 |
| 165 | Ga0501073_0131942 | 3300049589 | Bacteria | 1731 |
| 166 | Ga0501044_0281966 | 3300049823 | Bacteria | 1595 |
| 167 | Ga0500643_000124 | 3300053087 | Bacteria | 79663 |
| 168 | Ga0500651_0000041 | 3300053093 | Bacteria | 88035 |
| 169 | Ga0500556_0000008 | 3300053104 | Bacteria | 304943 |
| 170 | Ga0500559_0000173 | 3300053136 | Bacteria | 50992 |
| 171 | Ga0500559_0001221 | 3300053136 | Bacteria | 15216 |
| 172 | Ga0500559_0032810 | 3300053136 | Bacteria | 2233 |
| 173 | Ga0500568_0000003 | 3300053139 | Bacteria | 863587 |
| 174 | Ga0500568_0000007 | 3300053139 | Bacteria | 292579 |
| 175 | Ga0500568_0000099 | 3300053139 | Bacteria | 80197 |
| 176 | Ga0500568_0004874 | 3300053139 | Bacteria | 7077 |
| 177 | Ga0500573_0000005 | 3300053140 | Bacteria | 315762 |
| 178 | Ga0500573_0002995 | 3300053140 | Bacteria | 8632 |
| 179 | Ga0500573_0016530 | 3300053140 | Bacteria | 4187 |
| 180 | Ga0500573_0021385 | 3300053140 | Bacteria | 3706 |
| 181 | Ga0500573_0022436 | 3300053140 | Bacteria | 3623 |
| 182 | Ga0500573_0053904 | 3300053140 | Bacteria | 2310 |
| 183 | Ga0500573_0088443 | 3300053140 | Bacteria | 1752 |
| 184 | Ga0500577_0023944 | 3300053142 | Bacteria | 2047 |
| 185 | Ga0500577_0031527 | 3300053142 | Bacteria | 1855 |
| 186 | Ga0500620_008514 | 3300053155 | Bacteria | 2594 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | iso_pu_bacteria | 2775506925 | 2776376065 | 299 |
| 2 | 3300005339 | Ga0070660_100191452 | Ga0070660_1001914522 | 319 |
| 3 | 3300025919 | Ga0207657_10061465 | Ga0207657_100614653 | 321 |
| 4 | 3300038443 | Ga0395901_0118772 | Ga0395901_0118772_1646_2764 | 323 |
| 5 | 3300037418 | Ga0395900_0193143 | Ga0395900_0193143_706_1845 | 329 |
| 6 | 3300031824 | Ga0307413_10003169 | Ga0307413_100031692 | 341 |
| 7 | 3300053140 | Ga0500573_0000005 | Ga0500573_0000005_120832_121932 | 352 |
| 8 | iso_pu_bacteria | 2643221578 | 2643900187 | 356 |
| 9 | iso_pu_bacteria | 2767802112 | 2768642415 | 356 |
| 10 | iso_pu_bacteria | 2946045630 | 2946049445 | 356 |
| 11 | iso_pu_bacteria | 2863067949 | 2863069820 | 357 |
| 12 | iso_pu_bacteria | 2862705112 | 2862709106 | 358 |
| 13 | iso_pu_bacteria | 8008485437 | 8008486023 | 358 |
| 14 | iso_pu_bacteria | 8025524527 | 8025525339 | 358 |
| 15 | 3300045049 | Ga0466959_0094957 | Ga0466959_0094957_836_1984 | 359 |
| 16 | iso_pu_bacteria | 2870622029 | 2870625356 | 360 |
| 17 | 3300045976 | Ga0466967_0012048 | Ga0466967_0012048_2474_3625 | 361 |
| 18 | iso_pu_bacteria | 8056207758 | 8056213706 | 364 |
| 19 | 3300048929 | Ga0496126_0000007 | Ga0496126_0000007_361522_362739 | 366 |
| 20 | 3300053142 | Ga0500577_0023944 | Ga0500577_0023944_693_1862 | 366 |
| 21 | iso_pu_bacteria | 2866552031 | 2866554851 | 366 |
| 22 | 3300045976 | Ga0466967_0008850 | Ga0466967_0008850_6064_7272 | 368 |
| 23 | 3300005288 | Ga0065714_10010144 | Ga0065714_100101443 | 369 |
| 24 | 3300049589 | Ga0501073_0131942 | Ga0501073_0131942_496_1674 | 369 |
| 25 | 3300009093 | Ga0105240_10117013 | Ga0105240_101170133 | 371 |
| 26 | 3300053140 | Ga0500573_0016530 | Ga0500573_0016530_1667_2869 | 371 |
| 27 | 3300044693 | Ga0466961_0022880 | Ga0466961_0022880_2657_3910 | 372 |
| 28 | 3300048925 | Ga0496122_0002555 | Ga0496122_0002555_5794_6945 | 372 |
| 29 | 3300048926 | Ga0496123_0013320 | Ga0496123_0013320_1491_2642 | 372 |
| 30 | 3300053136 | Ga0500559_0032810 | Ga0500559_0032810_634_1797 | 372 |
| 31 | 3300031456 | Ga0307513_10122214 | Ga0307513_101222143 | 373 |
| 32 | 3300037312 | Ga0395899_0014050 | Ga0395899_0014050_3391_4668 | 373 |
| 33 | 3300037466 | Ga0395898_0022590 | Ga0395898_0022590_4259_5536 | 373 |
| 34 | 3300038443 | Ga0395901_0018987 | Ga0395901_0018987_825_2102 | 373 |
| 35 | 3300053139 | Ga0500568_0000007 | Ga0500568_0000007_248484_249650 | 373 |
| 36 | 3300046471 | Ga0495650_0000211 | Ga0495650_0000211_88105_89325 | 374 |
| 37 | 3300053136 | Ga0500559_0000173 | Ga0500559_0000173_41530_42696 | 374 |
| 38 | 3300053136 | Ga0500559_0001221 | Ga0500559_0001221_713_1882 | 374 |
| 39 | 3300005327 | Ga0070658_10011720 | Ga0070658_100117202 | 375 |
| 40 | 3300005563 | Ga0068855_100365086 | Ga0068855_1003650861 | 375 |
| 41 | 3300005616 | Ga0068852_100033118 | Ga0068852_1000331185 | 375 |
| 42 | 3300005834 | Ga0068851_10000053 | Ga0068851_1000005351 | 375 |
| 43 | 3300009098 | Ga0105245_10053498 | Ga0105245_100534983 | 375 |
| 44 | 3300009177 | Ga0105248_10029387 | Ga0105248_100293874 | 375 |
| 45 | 3300009545 | Ga0105237_10014141 | Ga0105237_100141413 | 375 |
| 46 | 3300009551 | Ga0105238_10000476 | Ga0105238_1000047635 | 375 |
| 47 | 3300025321 | Ga0207656_10000001 | Ga0207656_100000011162 | 375 |
| 48 | 3300025909 | Ga0207705_10010879 | Ga0207705_100108792 | 375 |
| 49 | 3300025914 | Ga0207671_10000001 | Ga0207671_100000011161 | 375 |
| 50 | 3300025924 | Ga0207694_10000019 | Ga0207694_1000001968 | 375 |
| 51 | 3300025927 | Ga0207687_10030424 | Ga0207687_100304243 | 375 |
| 52 | 3300025941 | Ga0207711_10016898 | Ga0207711_100168984 | 375 |
| 53 | 3300025949 | Ga0207667_10355980 | Ga0207667_103559802 | 375 |
| 54 | 3300026078 | Ga0207702_10158866 | Ga0207702_101588662 | 375 |
| 55 | 3300026142 | Ga0207698_10023507 | Ga0207698_100235075 | 375 |
| 56 | 3300037418 | Ga0395900_0010357 | Ga0395900_0010357_6602_7870 | 375 |
| 57 | 3300037471 | Ga0395905_0040383 | Ga0395905_0040383_3039_4307 | 375 |
| 58 | 3300048929 | Ga0496126_0014498 | Ga0496126_0014498_3655_4833 | 375 |
| 59 | 3300053140 | Ga0500573_0002995 | Ga0500573_0002995_2115_3368 | 375 |
| 60 | 3300053140 | Ga0500573_0088443 | Ga0500573_0088443_275_1468 | 375 |
| 61 | 3300046615 | Ga0495656_0086657 | Ga0495656_0086657_135_1304 | 376 |
| 62 | 3300049571 | Ga0501034_0043843 | Ga0501034_0043843_372_1568 | 376 |
| 63 | 3300049579 | Ga0501043_0161048 | Ga0501043_0161048_214_1410 | 376 |
| 64 | 3300049587 | Ga0501071_0009790 | Ga0501071_0009790_328_1524 | 376 |
| 65 | iso_pu_bacteria | 2585428094 | 2587861991 | 376 |
| 66 | 3300005437 | Ga0070710_10006814 | Ga0070710_100068142 | 377 |
| 67 | 3300005577 | Ga0068857_100005100 | Ga0068857_1000051005 | 377 |
| 68 | 3300025898 | Ga0207692_10068770 | Ga0207692_100687702 | 377 |
| 69 | 3300026116 | Ga0207674_10016735 | Ga0207674_100167353 | 377 |
| 70 | 3300049586 | Ga0501070_0035396 | Ga0501070_0035396_2003_3199 | 377 |
| 71 | iso_pu_bacteria | 2852643534 | 2852643994 | 377 |
| 72 | iso_pu_bacteria | 2857733635 | 2857735069 | 378 |
| 73 | iso_pu_bacteria | 2857737099 | 2857738792 | 378 |
| 74 | iso_pu_bacteria | 2966924647 | 2966926070 | 378 |
| 75 | iso_pu_bacteria | 2939660829 | 2939661986 | 379 |
| 76 | iso_pu_bacteria | 2966921586 | 2966924465 | 379 |
| 77 | iso_pu_bacteria | 8045830549 | 8045833212 | 379 |
| 78 | 3300013105 | Ga0157369_10083571 | Ga0157369_100835713 | 380 |
| 79 | 3300041452 | Ga0451793_0123572 | Ga0451793_0123572_1277_2434 | 380 |
| 80 | 3300049571 | Ga0501034_0154956 | Ga0501034_0154956_716_1873 | 380 |
| 81 | 3300053140 | Ga0500573_0022436 | Ga0500573_0022436_483_1661 | 380 |
| 82 | iso_pu_bacteria | 2939657138 | 2939660465 | 380 |
| 83 | iso_pu_bacteria | 2643221632 | 2644181826 | 381 |
| 84 | iso_pu_bacteria | 2643221649 | 2644280152 | 381 |
| 85 | 3300013105 | Ga0157369_10000615 | Ga0157369_1000061542 | 382 |
| 86 | 3300013105 | Ga0157369_10170042 | Ga0157369_101700423 | 382 |
| 87 | 3300042015 | Ga0439462_0014884 | Ga0439462_0014884_721_1893 | 382 |
| 88 | 3300053104 | Ga0500556_0000008 | Ga0500556_0000008_272271_273434 | 382 |
| 89 | 3300053139 | Ga0500568_0000003 | Ga0500568_0000003_31510_32673 | 382 |
| 90 | 3300013307 | Ga0157372_10124688 | Ga0157372_101246883 | 383 |
| 91 | 3300025253 | Ga0209677_100271 | Ga0209677_10027133 | 383 |
| 92 | 3300037312 | Ga0395899_0007189 | Ga0395899_0007189_3057_4223 | 383 |
| 93 | 3300037418 | Ga0395900_0224186 | Ga0395900_0224186_195_1361 | 383 |
| 94 | 3300049571 | Ga0501034_0024669 | Ga0501034_0024669_233_1399 | 383 |
| 95 | 3300049588 | Ga0501072_0122451 | Ga0501072_0122451_330_1496 | 383 |
| 96 | 3300049589 | Ga0501073_0045048 | Ga0501073_0045048_978_2144 | 383 |
| 97 | 3300053087 | Ga0500643_000124 | Ga0500643_000124_62268_63428 | 383 |
| 98 | iso_pu_bacteria | 2862993130 | 2862994089 | 383 |
| 99 | 3300005327 | Ga0070658_10000065 | Ga0070658_1000006536 | 384 |
| 100 | 3300005539 | Ga0068853_100302278 | Ga0068853_1003022781 | 384 |
| 101 | 3300005563 | Ga0068855_100241435 | Ga0068855_1002414352 | 384 |
| 102 | 3300013102 | Ga0157371_10022860 | Ga0157371_100228602 | 384 |
| 103 | 3300025904 | Ga0207647_10051240 | Ga0207647_100512403 | 384 |
| 104 | 3300025909 | Ga0207705_10000001 | Ga0207705_100000011031 | 384 |
| 105 | 3300026067 | Ga0207678_10043979 | Ga0207678_100439792 | 384 |
| 106 | 3300031649 | Ga0307514_10003701 | Ga0307514_100037014 | 384 |
| 107 | 3300037466 | Ga0395898_0152783 | Ga0395898_0152783_834_2087 | 384 |
| 108 | 3300053140 | Ga0500573_0021385 | Ga0500573_0021385_859_2031 | 384 |
| 109 | 3300053140 | Ga0500573_0053904 | Ga0500573_0053904_524_1693 | 384 |
| 110 | 3300053142 | Ga0500577_0031527 | Ga0500577_0031527_666_1838 | 384 |
| 111 | iso_pu_bacteria | 2844841374 | 2844844336 | 384 |
| 112 | iso_pu_bacteria | 2919055335 | 2919056286 | 384 |
| 113 | iso_pu_bacteria | 2919523602 | 2919526288 | 384 |
| 114 | iso_pu_bacteria | 2928153084 | 2928154419 | 384 |
| 115 | 3300005327 | Ga0070658_10001447 | Ga0070658_100014473 | 385 |
| 116 | 3300005338 | Ga0068868_100036222 | Ga0068868_1000362223 | 385 |
| 117 | 3300005338 | Ga0068868_100096583 | Ga0068868_1000965832 | 385 |
| 118 | 3300005339 | Ga0070660_100043651 | Ga0070660_1000436512 | 385 |
| 119 | 3300005344 | Ga0070661_100065973 | Ga0070661_1000659733 | 385 |
| 120 | 3300005355 | Ga0070671_100091858 | Ga0070671_1000918583 | 385 |
| 121 | 3300005366 | Ga0070659_100003355 | Ga0070659_10000335512 | 385 |
| 122 | 3300005367 | Ga0070667_100047298 | Ga0070667_1000472983 | 385 |
| 123 | 3300005539 | Ga0068853_100160966 | Ga0068853_1001609662 | 385 |
| 124 | 3300005543 | Ga0070672_100019574 | Ga0070672_1000195742 | 385 |
| 125 | 3300005563 | Ga0068855_100001284 | Ga0068855_10000128410 | 385 |
| 126 | 3300005614 | Ga0068856_100054207 | Ga0068856_1000542073 | 385 |
| 127 | 3300005616 | Ga0068852_100008302 | Ga0068852_1000083023 | 385 |
| 128 | 3300005617 | Ga0068859_100123444 | Ga0068859_1001234443 | 385 |
| 129 | 3300005618 | Ga0068864_100024877 | Ga0068864_1000248774 | 385 |
| 130 | 3300005841 | Ga0068863_100306786 | Ga0068863_1003067862 | 385 |
| 131 | 3300005841 | Ga0068863_100365254 | Ga0068863_1003652541 | 385 |
| 132 | 3300005842 | Ga0068858_100000176 | Ga0068858_10000017627 | 385 |
| 133 | 3300006931 | Ga0097620_100123446 | Ga0097620_1001234463 | 385 |
| 134 | 3300009093 | Ga0105240_10005148 | Ga0105240_1000514817 | 385 |
| 135 | 3300009093 | Ga0105240_10065741 | Ga0105240_100657414 | 385 |
| 136 | 3300009098 | Ga0105245_10025509 | Ga0105245_100255093 | 385 |
| 137 | 3300009174 | Ga0105241_10089329 | Ga0105241_100893292 | 385 |
| 138 | 3300009177 | Ga0105248_10000897 | Ga0105248_1000089711 | 385 |
| 139 | 3300009545 | Ga0105237_10004763 | Ga0105237_100047633 | 385 |
| 140 | 3300009545 | Ga0105237_10046388 | Ga0105237_100463884 | 385 |
| 141 | 3300009551 | Ga0105238_10154528 | Ga0105238_101545282 | 385 |
| 142 | 3300010375 | Ga0105239_10215476 | Ga0105239_102154763 | 385 |
| 143 | 3300010375 | Ga0105239_10326557 | Ga0105239_103265572 | 385 |
| 144 | 3300010375 | Ga0105239_10420718 | Ga0105239_104207182 | 385 |
| 145 | 3300013296 | Ga0157374_10034123 | Ga0157374_100341233 | 385 |
| 146 | 3300014325 | Ga0163163_10186156 | Ga0163163_101861561 | 385 |
| 147 | 3300014968 | Ga0157379_10068421 | Ga0157379_100684212 | 385 |
| 148 | 3300025254 | Ga0209148_1001014 | Ga0209148_100101410 | 385 |
| 149 | 3300025909 | Ga0207705_10009264 | Ga0207705_100092644 | 385 |
| 150 | 3300025911 | Ga0207654_10000001 | Ga0207654_10000001474 | 385 |
| 151 | 3300025913 | Ga0207695_10001399 | Ga0207695_1000139910 | 385 |
| 152 | 3300025913 | Ga0207695_10002309 | Ga0207695_100023094 | 385 |
| 153 | 3300025913 | Ga0207695_10002481 | Ga0207695_1000248110 | 385 |
| 154 | 3300025914 | Ga0207671_10003504 | Ga0207671_100035043 | 385 |
| 155 | 3300025914 | Ga0207671_10026178 | Ga0207671_100261782 | 385 |
| 156 | 3300025919 | Ga0207657_10007809 | Ga0207657_100078094 | 385 |
| 157 | 3300025919 | Ga0207657_10132863 | Ga0207657_101328631 | 385 |
| 158 | 3300025920 | Ga0207649_10140962 | Ga0207649_101409621 | 385 |
| 159 | 3300025927 | Ga0207687_10028346 | Ga0207687_100283462 | 385 |
| 160 | 3300025932 | Ga0207690_10002616 | Ga0207690_100026163 | 385 |
| 161 | 3300025940 | Ga0207691_10023123 | Ga0207691_100231232 | 385 |
| 162 | 3300025941 | Ga0207711_10000405 | Ga0207711_1000040537 | 385 |
| 163 | 3300025949 | Ga0207667_10000498 | Ga0207667_1000049815 | 385 |
| 164 | 3300025949 | Ga0207667_10088387 | Ga0207667_100883873 | 385 |
| 165 | 3300025981 | Ga0207640_10179266 | Ga0207640_101792662 | 385 |
| 166 | 3300025986 | Ga0207658_10224094 | Ga0207658_102240942 | 385 |
| 167 | 3300026035 | Ga0207703_10000121 | Ga0207703_1000012133 | 385 |
| 168 | 3300026041 | Ga0207639_10025918 | Ga0207639_100259184 | 385 |
| 169 | 3300026078 | Ga0207702_10141395 | Ga0207702_101413952 | 385 |
| 170 | 3300026088 | Ga0207641_10022978 | Ga0207641_100229783 | 385 |
| 171 | 3300026095 | Ga0207676_10027237 | Ga0207676_100272374 | 385 |
| 172 | 3300026116 | Ga0207674_10088286 | Ga0207674_100882862 | 385 |
| 173 | 3300026142 | Ga0207698_10008089 | Ga0207698_100080897 | 385 |
| 174 | 3300048922 | Ga0496119_0043948 | Ga0496119_0043948_1147_2310 | 385 |
| 175 | 3300048923 | Ga0496120_0008003 | Ga0496120_0008003_6578_7741 | 385 |
| 176 | 3300048929 | Ga0496126_0033914 | Ga0496126_0033914_1187_2350 | 385 |
| 177 | 3300049823 | Ga0501044_0281966 | Ga0501044_0281966_320_1492 | 385 |
| 178 | 3300053093 | Ga0500651_0000041 | Ga0500651_0000041_76570_77733 | 385 |
| 179 | 3300053155 | Ga0500620_008514 | Ga0500620_008514_737_1900 | 385 |
| 180 | 3300041452 | Ga0451793_1684741 | Ga0451793_1684741_580_1755 | 386 |
| 181 | 3300046457 | Ga0495590_0000502 | Ga0495590_0000502_17710_18882 | 386 |
| 182 | 3300049570 | Ga0501033_0036965 | Ga0501033_0036965_2314_3486 | 386 |
| 183 | 3300049573 | Ga0501037_0028084 | Ga0501037_0028084_1667_2839 | 386 |
| 184 | 3300049574 | Ga0501038_0065155 | Ga0501038_0065155_1345_2517 | 386 |
| 185 | 3300049579 | Ga0501043_0193641 | Ga0501043_0193641_64_1236 | 386 |
| 186 | 3300049581 | Ga0501047_0114062 | Ga0501047_0114062_1071_2243 | 386 |
| 187 | 3300049586 | Ga0501070_0100991 | Ga0501070_0100991_1048_2220 | 386 |
| 188 | 3300053139 | Ga0500568_0000099 | Ga0500568_0000099_27976_29148 | 386 |
| 189 | 3300044683 | Ga0466965_0000004 | Ga0466965_0000004_128256_129449 | 387 |
| 190 | 3300049568 | Ga0501031_0112420 | Ga0501031_0112420_31_1230 | 387 |
| 191 | 3300049569 | Ga0501032_0046636 | Ga0501032_0046636_1382_2563 | 387 |
| 192 | 3300049569 | Ga0501032_0117498 | Ga0501032_0117498_139_1338 | 387 |
| 193 | 3300049570 | Ga0501033_0021907 | Ga0501033_0021907_1376_2557 | 387 |
| 194 | 3300049571 | Ga0501034_0046529 | Ga0501034_0046529_1668_2843 | 387 |
| 195 | 3300049571 | Ga0501034_0051405 | Ga0501034_0051405_963_2162 | 387 |
| 196 | 3300049571 | Ga0501034_0203666 | Ga0501034_0203666_141_1322 | 387 |
| 197 | 3300049573 | Ga0501037_0020980 | Ga0501037_0020980_2980_4179 | 387 |
| 198 | 3300049574 | Ga0501038_0023477 | Ga0501038_0023477_4119_5318 | 387 |
| 199 | 3300049574 | Ga0501038_0069665 | Ga0501038_0069665_1468_2649 | 387 |
| 200 | 3300053139 | Ga0500568_0004874 | Ga0500568_0004874_805_1983 | 387 |
| 201 | 3300003578 | Ga0006562J51391_1007922 | Ga0006562J51391_10079223 | 388 |
| 202 | 3300003578 | Ga0006562J51391_1007923 | Ga0006562J51391_10079233 | 388 |
| 203 | 3300003752 | Ga0055539_1000014 | Ga0055539_10000144 | 388 |
| 204 | 3300003756 | Ga0055533_1000002 | Ga0055533_1000002791 | 388 |
| 205 | 3300003841 | Ga0055541_1000497 | Ga0055541_100049710 | 388 |
| 206 | 3300005327 | Ga0070658_10016063 | Ga0070658_100160634 | 388 |
| 207 | 3300025225 | Ga0209566_100056 | Ga0209566_100056219 | 388 |
| 208 | 3300025226 | Ga0209674_100001 | Ga0209674_1000012773 | 388 |
| 209 | 3300025230 | Ga0209563_100001 | Ga0209563_1000012773 | 388 |
| 210 | 3300025253 | Ga0209677_100001 | Ga0209677_1000012773 | 388 |
| 211 | 3300044658 | Ga0466972_0014295 | Ga0466972_0014295_274_1440 | 388 |
| 212 | 3300045049 | Ga0466959_0042693 | Ga0466959_0042693_632_1798 | 388 |
| 213 | 3300048920 | Ga0496117_0027272 | Ga0496117_0027272_2622_3788 | 388 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2o5v-assembly1.cif.gz_A | recombination mediator recf | 0.9218 | 2 | 384 |
| 5z68-assembly1.cif.gz_B | structure of the recombination mediator protein recf-atp in recfor pathway | 0.8937 | 2 | 380 |
| 5z69-assembly1.cif.gz_B | structure of the recombination mediator protein recf-atprs in recfor pathway | 0.8932 | 2 | 379 |
| 1f2u-assembly1.cif.gz_C | crystal structure of rad50 abc-atpase | 0.8905 | 1 | 95 |
| 2o5v-assembly1.cif.gz_A | recombination mediator recf | 0.8897 | 2 | 384 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WHI9_4_98_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9934 | 5 | 96 | 3.40.50.300 |
| af_Q2G275_4_97_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9676 | 5 | 96 | 3.40.50.300 |
| af_P9WHI9_4_98_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9522 | 5 | 96 | 3.40.50.300 |
| af_P0A7H0_3_104_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9473 | 4 | 96 | 3.40.50.300 |
| 5zwuA02 | Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;RecF/RecN/SMC, N-terminal domain | 0.9322 | 117 | 324 | 1.20.1050.90 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7X7JH85-F1-model_v4 | AAA family ATPase | 0.9894 | 1 | 104 |
GO:0000731
GO:0003677 GO:0005524 GO:0005737 GO:0006302 GO:0016887 |
| AF-A0A7K1IQQ6-F1-model_v4 | AAA family ATPase | 0.9869 | 1 | 93 |
GO:0000731
GO:0003677 GO:0005524 GO:0005737 GO:0006302 |
| AF-X8DIK0-F1-model_v4 | AAA domain protein | 0.9846 | 1 | 96 |
GO:0000731
GO:0003677 GO:0005524 GO:0005737 GO:0006302 GO:0016887 |
| AF-A0A7K1IQQ6-F1-model_v4 | AAA family ATPase | 0.9765 | 1 | 93 |
GO:0000731
GO:0003677 GO:0005524 GO:0005737 GO:0006302 |
| AF-A0A3M0ZSK6-F1-model_v4 | DNA replication and repair protein RecF | 0.9702 | 1 | 88 |
GO:0000731
GO:0003677 GO:0005524 GO:0005737 GO:0006302 |
Predicted Structure (AlphaFold2)
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