F324650

General Info

Members Datasets Scaffolds Average Seq Length
213 171 139 532

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2966924647|2966925214
Length 591
Sequence TAAKADAPFLLTKRRIWIIFGALISGMLLSSLDQTIVSTAMPTIVGELGGVEHQAWITTAYLLATTIVMPIYGKFGDVLGRRNLFLVAIAIFTLASIGCAFATDFWMFVVFRAIQGLGGGGLMILSQAIIADIVPASERGKYLGPLGAVFGLSAIGGPLLGGFFVDHLTWQWAFYINIPVGIAAFAITWAALTLPSKKATKRIDVLGVVLLSAATTCLIFFTEFGGQDDHGWGAPETWLWGAGVVVAASLFVLVESRADDPIIPLSFFRNKVFVLATAVGFVLGIGMFSAIAFVPTFLQMSSGASAAVSGLLLLPMMVGLIGTSILSGNLITRTGKYKVFPVVGTILTGIAMALFTTLTADTPLWLICVFFFLFGAGLGLIMQVVVLVVQNSVDAQNVGTATSTNNYFREVGAALGVAIFGALFTSRLTSNLTDVFTGAGASAGDASQATATLDPATLNQLPEQIRRLVVEAYADSLAPVFAYLIPFIAVAFVLSLFLPQIRLSDVAGMVSRGEALSGDEAEQLEAAERAAHGRGAGRAGRRGAGTASEVATAGAVATGAPVAPLDGADERDDADERVADGADERDDADRP

Samples

Sample ID Description Type Environment
1 2547132424 Nocardia nova SH22a Isolate Unclassified
2 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
3 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
4 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
5 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
6 2643221553 Microbacterium sp. Root553 Isolate Unclassified
7 2643221566 Microbacterium sp. Root166 Isolate Unclassified
8 2643221572 Leifsonia sp. Root60 Isolate Unclassified
9 2643221630 Microbacterium sp. Root322 Isolate Unclassified
10 2643221649 Leifsonia sp. Root4 Isolate Unclassified
11 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
12 2643221692 Nocardia sp. Root136 Isolate Unclassified
13 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
14 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
15 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
16 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
17 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
18 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
19 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
20 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
21 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
22 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
23 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
24 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
25 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
26 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
27 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
28 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
29 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
30 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
31 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
32 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
33 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
34 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
35 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
36 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
37 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
38 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
39 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
40 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
41 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
42 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
43 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
44 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
45 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
46 2919395869 Microbacterium resistens 2980 Isolate Unclassified
47 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
48 2920879853 Kocuria salina CV6 Isolate Unclassified
49 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
50 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
51 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
52 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
53 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
54 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
55 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
56 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
57 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
58 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
59 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
60 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
61 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
62 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
63 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
64 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
65 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
66 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
67 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
68 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
69 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
70 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
71 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
72 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
73 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
74 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
75 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
76 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
77 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
78 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
79 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
80 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
81 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
82 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
83 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
84 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
85 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
86 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
87 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
88 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
89 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
90 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
91 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
92 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
93 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
94 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
95 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
96 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
106 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
107 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
121 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
122 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
123 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
124 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
125 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
126 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
127 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
128 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
129 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
130 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
131 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
132 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
144 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
155 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
156 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
157 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
158 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
159 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
160 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
161 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
162 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
163 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
164 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
165 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
166 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
167 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
168 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
169 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
170 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
171 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 63.38
Metatranscriptomes 1.88
Isolates 34.74

Biome Distribution

Category Percentage (%)
Aerial Root 0.47
Bulb 0
Endosphere 11.27
Nodule 0
Rhizoplane 2.35
Rhizosphere 61.5
Stem 0
Stem Tuber 0
Unclassified 24.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1002772 3300000549 Bacteria 2406
2 JGI25154J39366_1001573 3300002738 Bacteria 7835
3 JGI25152J39213_1000411 3300002773 Bacteria 25803
4 Ga0007423J48922_100772 3300003285 Bacteria 9043
5 rootH1_10012224 3300003323 Bacteria 33390
6 Ga0006562J51391_1052846 3300003578 Bacteria 15670
7 Ga0006562J51391_1052850 3300003578 Bacteria 11320
8 Ga0065714_10069295 3300005288 Bacteria 4291
9 Ga0070674_100028211 3300005356 Bacteria 3686
10 Ga0070667_100040948 3300005367 Bacteria 3886
11 Ga0068866_10024068 3300005718 Bacteria 2841
12 Ga0070717_10059696 3300006028 Bacteria 3156
13 Ga0075365_10006034 3300006038 Bacteria 6615
14 Ga0075364_10007086 3300006051 Bacteria 6628
15 Ga0075364_10035308 3300006051 Bacteria 3230
16 Ga0075369_10001024 3300006186 Bacteria 9335
17 Ga0075369_10003754 3300006186 Bacteria 5555
18 Ga0068865_100044111 3300006881 Bacteria 3050
19 Ga0105244_10017979 3300009036 Bacteria 3979
20 Ga0105244_10020956 3300009036 Bacteria 3622
21 Ga0105243_10026045 3300009148 Bacteria 4475
22 Ga0105243_10038678 3300009148 Bacteria 3716
23 Ga0105248_10000619 3300009177 Bacteria 40470
24 Ga0105246_10071374 3300011119 Bacteria 2445
25 Ga0157371_10029176 3300013102 Bacteria 3993
26 Ga0157370_10006052 3300013104 Bacteria 13433
27 Ga0157370_10124909 3300013104 Bacteria 2402
28 Ga0157369_10001451 3300013105 Bacteria 29091
29 Ga0171462_1005 3300013250 Bacteria 598379
30 Ga0157378_10024741 3300013297 Bacteria 5286
31 Ga0157372_10143126 3300013307 Bacteria 2757
32 Ga0209646_1000088 3300025246 Bacteria 192345
33 Ga0209129_1000059 3300025258 Bacteria 250603
34 Ga0209025_1000782 3300025294 Bacteria 52292
35 Ga0209051_1002951 3300025303 Bacteria 11598
36 Ga0207697_10008002 3300025315 Bacteria 4667
37 Ga0207655_1010288 3300025728 Bacteria 5682
38 Ga0207655_1012726 3300025728 Bacteria 4888
39 Ga0207709_10009410 3300025935 Bacteria 5375
40 Ga0207709_10025551 3300025935 Bacteria 3383
41 Ga0207704_10012681 3300025938 Bacteria 4188
42 Ga0207711_10000670 3300025941 Bacteria 34027
43 Ga0207648_10161895 3300026089 Bacteria 1976
44 Ga0268266_10029561 3300028379 Bacteria 4658
45 Ga0307513_10000003 3300031456 Bacteria 590921
46 Ga0307408_100017469 3300031548 Bacteria 4801
47 Ga0307408_100030439 3300031548 Bacteria 3748
48 Ga0307408_100041818 3300031548 Bacteria 3251
49 Ga0307408_100127982 3300031548 Bacteria 1977
50 Ga0307514_10003200 3300031649 Bacteria 15992
51 Ga0307413_10005886 3300031824 Bacteria 5536
52 Ga0307413_10014607 3300031824 Bacteria 3995
53 Ga0307413_10075233 3300031824 Bacteria 2142
54 Ga0307410_10002887 3300031852 Bacteria 8461
55 Ga0307410_10119263 3300031852 Bacteria 1921
56 Ga0307406_10000311 3300031901 Bacteria 28306
57 Ga0307406_10000387 3300031901 Bacteria 25468
58 Ga0307407_10027498 3300031903 Bacteria 3028
59 Ga0307407_10038459 3300031903 Bacteria 2652
60 Ga0307407_10061248 3300031903 Bacteria 2199
61 Ga0307407_10066882 3300031903 Bacteria 2121
62 Ga0307412_10005640 3300031911 Bacteria 7029
63 Ga0307412_10019307 3300031911 Bacteria 4124
64 Ga0307412_10034731 3300031911 Bacteria 3215
65 Ga0307412_10070298 3300031911 Bacteria 2386
66 Ga0307412_10110267 3300031911 Bacteria 1963
67 Ga0307409_100009788 3300031995 Bacteria 5911
68 Ga0307409_100127695 3300031995 Bacteria 2166
69 Ga0307416_100008478 3300032002 Bacteria 6637
70 Ga0307416_100030577 3300032002 Bacteria 4043
71 Ga0307411_10018865 3300032005 Bacteria 3969
72 Ga0307415_100040160 3300032126 Bacteria 3098
73 Ga0395899_0023719 3300037312 Bacteria 4643
74 Ga0395899_0064548 3300037312 Bacteria 2692
75 Ga0395900_0017062 3300037418 Bacteria 7412
76 Ga0395900_0034823 3300037418 Bacteria 5187
77 Ga0395898_0009048 3300037466 Bacteria 10486
78 Ga0395901_0135218 3300038443 Bacteria 2591
79 Ga0439436_0001019 3300041404 Bacteria 7831
80 Ga0439466_0005645 3300041411 Bacteria 4770
81 Ga0439442_003919 3300042002 Bacteria 2951
82 Ga0439449_0004662 3300042007 Bacteria 5293
83 Ga0439449_0018938 3300042007 Bacteria 2581
84 Ga0466970_0031022 3300044765 Bacteria 2821
85 Ga0466960_0058068 3300044901 Bacteria 1889
86 Ga0495627_001168 3300046453 Bacteria 16769
87 Ga0495650_0054838 3300046471 Bacteria 1625
88 Ga0495580_0033218 3300046472 Bacteria 3718
89 Ga0495639_0006850 3300046475 Bacteria 4898
90 Ga0495662_0006947 3300046476 Bacteria 5625
91 Ga0495664_0020993 3300046477 Bacteria 3770
92 Ga0495665_0002444 3300046531 Bacteria 10031
93 Ga0495587_0000831 3300046536 Bacteria 20411
94 Ga0495645_0001753 3300046543 Bacteria 14748
95 Ga0495667_0026840 3300046559 Bacteria 3880
96 Ga0495588_0004169 3300046674 Bacteria 6373
97 Ga0495588_0039790 3300046674 Bacteria 2396
98 Ga0496102_0114286 3300048905 Bacteria 2518
99 Ga0496103_0016844 3300048906 Bacteria 4365
100 Ga0496103_0039363 3300048906 Bacteria 2905
101 Ga0496106_0021425 3300048909 Bacteria 4799
102 Ga0496112_0063494 3300048915 Bacteria 3643
103 Ga0496117_0001045 3300048920 Bacteria 42245
104 Ga0496117_0009898 3300048920 Bacteria 8775
105 Ga0496117_0089602 3300048920 Bacteria 1986
106 Ga0496118_0001725 3300048921 Bacteria 31843
107 Ga0496118_0009385 3300048921 Bacteria 9899
108 Ga0496119_0001137 3300048922 Bacteria 33415
109 Ga0496122_0021356 3300048925 Bacteria 5799
110 Ga0496124_0000075 3300048927 Bacteria 218086
111 Ga0496125_0009267 3300048928 Bacteria 10162
112 Ga0496125_0011379 3300048928 Bacteria 8906
113 Ga0496125_0012710 3300048928 Bacteria 8329
114 Ga0496126_0027120 3300048929 Bacteria 5478
115 Ga0496126_0033793 3300048929 Bacteria 4810
116 Ga0501318_001049 3300049534 Bacteria 2034
117 Ga0501032_0016025 3300049569 Bacteria 5277
118 Ga0501032_0024460 3300049569 Bacteria 4170
119 Ga0501034_0004649 3300049571 Bacteria 15201
120 Ga0501037_0080563 3300049573 Bacteria 2362
121 Ga0501070_0000951 3300049586 Bacteria 26149
122 Ga0501044_0002632 3300049823 Bacteria 20418
123 Ga0501044_0143164 3300049823 Bacteria 2378
124 nmdc:mga00v17_30537_c2 3300050491 Bacteria 2710
125 nmdc:mga00v17_45146_c1 3300050491 Bacteria 2661
126 nmdc:mga0yw44_41350_c1 3300050492 Bacteria 2744
127 nmdc:mga0sz30_1874_c1 3300050516 Bacteria 7495
128 Ga0495655_0000592 3300053083 Bacteria 5942
129 Ga0500556_0000059 3300053104 Bacteria 112837
130 Ga0500556_0000247 3300053104 Bacteria 43841
131 Ga0500562_001587 3300053108 Bacteria 5653
132 Ga0500593_000608 3300053117 Bacteria 13765
133 Ga0500655_002020 3300053133 Bacteria 3775
134 Ga0500559_0000539 3300053136 Bacteria 26232
135 Ga0500559_0000889 3300053136 Bacteria 19130
136 Ga0500568_0000012 3300053139 Bacteria 225711
137 Ga0500568_0000327 3300053139 Bacteria 37336
138 Ga0500573_0000024 3300053140 Bacteria 151713
139 Ga0500573_0013253 3300053140 Bacteria 4642

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050491 nmdc:mga00v17_45146_c1 nmdc:mga00v17_45146_c1_906_2546 418
2 3300003323 rootH1_10012224 rootH1_1001222422 430
3 3300046471 Ga0495650_0054838 Ga0495650_0054838_13_1539 437
4 3300032002 Ga0307416_100030577 Ga0307416_1000305773 439
5 3300031995 Ga0307409_100127695 Ga0307409_1001276952 441
6 3300013105 Ga0157369_10001451 Ga0157369_1000145124 448
7 3300031911 Ga0307412_10070298 Ga0307412_100702982 450
8 3300048915 Ga0496112_0063494 Ga0496112_0063494_2011_3603 450
9 3300005367 Ga0070667_100040948 Ga0070667_1000409482 454
10 3300013104 Ga0157370_10124909 Ga0157370_101249092 454
11 3300048922 Ga0496119_0001137 Ga0496119_0001137_13756_15447 454
12 3300049586 Ga0501070_0000951 Ga0501070_0000951_15424_17121 454
13 3300009177 Ga0105248_10000619 Ga0105248_100006192 455
14 3300025941 Ga0207711_10000670 Ga0207711_1000067030 455
15 3300048905 Ga0496102_0114286 Ga0496102_0114286_22_1644 456
16 3300049571 Ga0501034_0004649 Ga0501034_0004649_217_1821 457
17 3300002738 JGI25154J39366_1001573 JGI25154J39366_10015737 458
18 3300042007 Ga0439449_0018938 Ga0439449_0018938_64_1623 458
19 3300048920 Ga0496117_0001045 Ga0496117_0001045_22176_23855 458
20 3300048921 Ga0496118_0001725 Ga0496118_0001725_11584_13263 458
21 3300048927 Ga0496124_0000075 Ga0496124_0000075_150243_151922 458
22 3300025246 Ga0209646_1000088 Ga0209646_100008816 459
23 3300049823 Ga0501044_0143164 Ga0501044_0143164_571_2325 459
24 3300031456 Ga0307513_10000003 Ga0307513_10000003149 460
25 3300049823 Ga0501044_0002632 Ga0501044_0002632_13476_15290 460
26 3300041404 Ga0439436_0001019 Ga0439436_0001019_1587_3218 461
27 3300041411 Ga0439466_0005645 Ga0439466_0005645_800_2431 461
28 3300042002 Ga0439442_003919 Ga0439442_003919_473_2104 461
29 3300042007 Ga0439449_0004662 Ga0439449_0004662_1027_2658 461
30 3300053139 Ga0500568_0000327 Ga0500568_0000327_8201_9889 461
31 3300053140 Ga0500573_0013253 Ga0500573_0013253_2247_3932 461
32 3300006028 Ga0070717_10059696 Ga0070717_100596962 462
33 3300003285 Ga0007423J48922_100772 Ga0007423J48922_1007726 463
34 3300013307 Ga0157372_10143126 Ga0157372_101431262 464
35 3300049573 Ga0501037_0080563 Ga0501037_0080563_360_2003 464
36 3300053136 Ga0500559_0000889 Ga0500559_0000889_6323_7990 464
37 3300013250 Ga0171462_1005 Ga0171462_100561 465
38 3300044901 Ga0466960_0058068 Ga0466960_0058068_29_1687 466
39 3300050491 nmdc:mga00v17_30537_c2 nmdc:mga00v17_30537_c2_259_1887 467
40 3300053140 Ga0500573_0000024 Ga0500573_0000024_141348_142985 467
41 3300048929 Ga0496126_0033793 Ga0496126_0033793_1171_2814 468
42 iso_pu_bacteria 2643221692 2644516388 468
43 3300006038 Ga0075365_10006034 Ga0075365_100060346 469
44 3300009036 Ga0105244_10020956 Ga0105244_100209562 469
45 3300009148 Ga0105243_10038678 Ga0105243_100386783 469
46 3300025728 Ga0207655_1010288 Ga0207655_10102884 469
47 3300025935 Ga0207709_10009410 Ga0207709_100094105 469
48 3300031903 Ga0307407_10027498 Ga0307407_100274982 469
49 3300049569 Ga0501032_0016025 Ga0501032_0016025_1947_3839 469
50 3300050492 nmdc:mga0yw44_41350_c1 nmdc:mga0yw44_41350_c1_687_2342 469
51 3300005288 Ga0065714_10069295 Ga0065714_100692955 470
52 3300028379 Ga0268266_10029561 Ga0268266_100295612 470
53 3300048928 Ga0496125_0009267 Ga0496125_0009267_815_2479 470
54 3300053083 Ga0495655_0000592 Ga0495655_0000592_1725_3437 470
55 3300053104 Ga0500556_0000059 Ga0500556_0000059_97580_99229 470
56 3300053139 Ga0500568_0000012 Ga0500568_0000012_97655_99304 470
57 3300046453 Ga0495627_001168 Ga0495627_001168_10952_12619 471
58 3300048928 Ga0496125_0011379 Ga0496125_0011379_5036_6739 471
59 iso_pu_bacteria 2866552031 2866556984 471
60 iso_pu_bacteria 2919391150 2919392151 472
61 iso_pu_bacteria 2945956166 2945957790 472
62 3300048925 Ga0496122_0021356 Ga0496122_0021356_1141_2844 473
63 3300053108 Ga0500562_001587 Ga0500562_001587_1490_3169 473
64 iso_pu_bacteria 2551306166 2552110509 473
65 3300006186 Ga0075369_10001024 Ga0075369_100010245 474
66 3300046475 Ga0495639_0006850 Ga0495639_0006850_2917_4560 474
67 3300050516 nmdc:mga0sz30_1874_c1 nmdc:mga0sz30_1874_c1_1327_3036 474
68 3300003578 Ga0006562J51391_1052846 Ga0006562J51391_105284610 475
69 3300003578 Ga0006562J51391_1052850 Ga0006562J51391_10528507 475
70 3300031649 Ga0307514_10003200 Ga0307514_1000320016 475
71 3300048906 Ga0496103_0016844 Ga0496103_0016844_1830_3530 475
72 3300046674 Ga0495588_0039790 Ga0495588_0039790_392_2089 476
73 3300048920 Ga0496117_0009898 Ga0496117_0009898_1567_3243 476
74 3300048928 Ga0496125_0012710 Ga0496125_0012710_1042_2718 476
75 3300048929 Ga0496126_0027120 Ga0496126_0027120_2549_4225 476
76 iso_pu_bacteria 2857733635 2857734619 477
77 iso_pu_bacteria 2945941187 2945944024 477
78 3300025315 Ga0207697_10008002 Ga0207697_100080024 478
79 3300031548 Ga0307408_100017469 Ga0307408_1000174693 478
80 3300031824 Ga0307413_10005886 Ga0307413_100058863 478
81 3300031852 Ga0307410_10002887 Ga0307410_100028872 478
82 3300031911 Ga0307412_10005640 Ga0307412_100056406 478
83 3300031995 Ga0307409_100009788 Ga0307409_1000097882 478
84 3300032002 Ga0307416_100008478 Ga0307416_1000084785 478
85 3300053136 Ga0500559_0000539 Ga0500559_0000539_24006_25676 478
86 iso_pu_bacteria 8056207758 8056213529 478
87 3300006051 Ga0075364_10007086 Ga0075364_100070866 480
88 3300006051 Ga0075364_10035308 Ga0075364_100353081 480
89 3300006186 Ga0075369_10003754 Ga0075369_100037548 480
90 3300044765 Ga0466970_0031022 Ga0466970_0031022_622_2310 480
91 3300053104 Ga0500556_0000247 Ga0500556_0000247_26721_28400 480
92 3300053117 Ga0500593_000608 Ga0500593_000608_3223_4902 480
93 3300053133 Ga0500655_002020 Ga0500655_002020_1351_3030 480
94 3300013102 Ga0157371_10029176 Ga0157371_100291763 481
95 3300013104 Ga0157370_10006052 Ga0157370_1000605211 481
96 3300031901 Ga0307406_10000311 Ga0307406_1000031117 481
97 3300048921 Ga0496118_0009385 Ga0496118_0009385_4004_5701 482
98 iso_pu_bacteria 2852643534 2852645953 483
99 iso_pu_bacteria 8004182704 8004183467 483
100 iso_pu_bacteria 2808606357 2808830471 485
101 iso_pu_bacteria 2808606360 2808851664 485
102 iso_pu_bacteria 2852663356 2852665924 486
103 iso_pu_bacteria 2928104781 2928107637 486
104 3300048909 Ga0496106_0021425 Ga0496106_0021425_1376_3091 487
105 iso_pu_bacteria 2811994880 2812365590 487
106 iso_pu_bacteria 2908674828 2908677371 487
107 iso_pu_bacteria 2919538618 2919538956 487
108 iso_pu_bacteria 8055034563 8055035085 487
109 iso_pu_bacteria 2904501621 2904502359 488
110 iso_pu_bacteria 2904776348 2904778475 488
111 iso_pu_bacteria 2928500415 2928502565 488
112 iso_pu_bacteria 8004021418 8004023720 488
113 3300048920 Ga0496117_0089602 Ga0496117_0089602_241_1941 489
114 iso_pu_bacteria 2547132424 2548693962 489
115 iso_pu_bacteria 2643221724 2644679177 489
116 iso_pu_bacteria 2728369380 2730228680 489
117 iso_pu_bacteria 2747842429 2747951851 489
118 iso_pu_bacteria 2857740372 2857740486 489
119 iso_pu_bacteria 2904497146 2904499372 489
120 iso_pu_bacteria 2910809715 2910810375 489
121 iso_pu_bacteria 2919034639 2919035832 489
122 iso_pu_bacteria 2919042368 2919044100 489
123 iso_pu_bacteria 2932426870 2932427537 489
124 iso_pu_bacteria 2933418574 2933418874 489
125 iso_pu_bacteria 2939660829 2939660848 489
126 iso_pu_bacteria 2939674588 2939677119 489
127 3300031901 Ga0307406_10000387 Ga0307406_100003876 490
128 3300046674 Ga0495588_0004169 Ga0495588_0004169_3125_4831 490
129 iso_pu_bacteria 2643221542 2643734761 490
130 iso_pu_bacteria 2643221630 2644172920 490
131 iso_pu_bacteria 2919395869 2919397950 490
132 iso_pu_bacteria 2920879853 2920882693 490
133 3300005356 Ga0070674_100028211 Ga0070674_1000282114 491
134 3300005718 Ga0068866_10024068 Ga0068866_100240682 491
135 3300006881 Ga0068865_100044111 Ga0068865_1000441112 491
136 3300009036 Ga0105244_10017979 Ga0105244_100179793 491
137 3300009148 Ga0105243_10026045 Ga0105243_100260454 491
138 3300011119 Ga0105246_10071374 Ga0105246_100713742 491
139 3300013297 Ga0157378_10024741 Ga0157378_100247414 491
140 3300025303 Ga0209051_1002951 Ga0209051_10029518 491
141 3300025728 Ga0207655_1012726 Ga0207655_10127262 491
142 3300025935 Ga0207709_10025551 Ga0207709_100255512 491
143 3300025938 Ga0207704_10012681 Ga0207704_100126813 491
144 3300026089 Ga0207648_10161895 Ga0207648_101618952 491
145 3300031548 Ga0307408_100030439 Ga0307408_1000304394 491
146 3300031852 Ga0307410_10119263 Ga0307410_101192632 491
147 3300031903 Ga0307407_10066882 Ga0307407_100668822 491
148 3300031911 Ga0307412_10034731 Ga0307412_100347312 491
149 3300032126 Ga0307415_100040160 Ga0307415_1000401603 491
150 iso_pu_bacteria 2904430863 2904433833 491
151 iso_pu_bacteria 2939657138 2939659873 491
152 iso_pu_bacteria 2946003308 2946003762 491
153 iso_pu_bacteria 2984551494 2984552587 491
154 3300049534 Ga0501318_001049 Ga0501318_001049_133_1815 492
155 iso_pu_bacteria 2751185788 2753300477 492
156 iso_pu_bacteria 2870628048 2870631182 492
157 iso_pu_bacteria 2909074476 2909076067 492
158 iso_pu_bacteria 2919039151 2919041923 492
159 iso_pu_bacteria 8046352972 8046355047 492
160 iso_pu_bacteria 8055037949 8055038241 492
161 iso_pu_bacteria 2643221553 2643785023 493
162 iso_pu_bacteria 2643221649 2644279947 493
163 iso_pu_bacteria 2808606366 2808875856 493
164 iso_pu_bacteria 2857723135 2857726201 493
165 3300002773 JGI25152J39213_1000411 JGI25152J39213_100041119 494
166 3300025258 Ga0209129_1000059 Ga0209129_100005983 494
167 3300025294 Ga0209025_1000782 Ga0209025_100078232 494
168 3300048906 Ga0496103_0039363 Ga0496103_0039363_108_1820 494
169 iso_pu_bacteria 2945920336 2945924257 494
170 iso_pu_bacteria 2946024296 2946025164 494
171 iso_pu_bacteria 2946037020 2946039980 494
172 iso_pu_bacteria 2946059875 2946063567 494
173 3300046472 Ga0495580_0033218 Ga0495580_0033218_617_2317 495
174 iso_pu_bacteria 2643221566 2643846552 495
175 iso_pu_bacteria 2585428094 2587862219 496
176 iso_pu_bacteria 2935409751 2935410096 496
177 3300037312 Ga0395899_0023719 Ga0395899_0023719_2269_3954 497
178 3300037312 Ga0395899_0064548 Ga0395899_0064548_941_2623 497
179 3300037418 Ga0395900_0017062 Ga0395900_0017062_1241_2926 497
180 3300037418 Ga0395900_0034823 Ga0395900_0034823_1228_2913 497
181 3300037466 Ga0395898_0009048 Ga0395898_0009048_4636_6321 497
182 3300038443 Ga0395901_0135218 Ga0395901_0135218_57_1739 497
183 iso_pu_bacteria 2554235227 2555229660 497
184 iso_pu_bacteria 2811994872 2812321919 497
185 iso_pu_bacteria 2928121344 2928124268 497
186 3300031903 Ga0307407_10038459 Ga0307407_100384592 498
187 iso_pu_bacteria 2643221572 2643875701 498
188 iso_pu_bacteria 2643221669 2644382756 498
189 iso_pu_bacteria 2690315906 2691513226 498
190 iso_pu_bacteria 2775506735 2775656413 498
191 iso_pu_bacteria 2808606370 2808894733 498
192 iso_pu_bacteria 2811994871 2812317773 498
193 iso_pu_bacteria 2895660088 2895663266 498
194 3300031548 Ga0307408_100127982 Ga0307408_1001279821 499
195 3300031824 Ga0307413_10075233 Ga0307413_100752332 499
196 3300032005 Ga0307411_10018865 Ga0307411_100188652 499
197 iso_pu_bacteria 2721755702 2723640601 500
198 iso_pu_bacteria 2945916053 2945919841 500
199 3300031548 Ga0307408_100041818 Ga0307408_1000418182 502
200 3300031903 Ga0307407_10061248 Ga0307407_100612482 502
201 3300031911 Ga0307412_10110267 Ga0307412_101102672 502
202 3300046476 Ga0495662_0006947 Ga0495662_0006947_732_2441 502
203 3300046477 Ga0495664_0020993 Ga0495664_0020993_857_2566 502
204 3300046531 Ga0495665_0002444 Ga0495665_0002444_2817_4526 502
205 3300046536 Ga0495587_0000831 Ga0495587_0000831_109_1818 502
206 3300046543 Ga0495645_0001753 Ga0495645_0001753_501_2210 502
207 3300046559 Ga0495667_0026840 Ga0495667_0026840_534_2243 502
208 iso_pu_bacteria 8004025490 8004028923 502
209 3300031824 Ga0307413_10014607 Ga0307413_100146072 503
210 3300031911 Ga0307412_10019307 Ga0307412_100193074 503
211 3300049569 Ga0501032_0024460 Ga0501032_0024460_2442_4145 503
212 iso_pu_bacteria 2966924647 2966925214 505
213 3300000549 LJQas_1002772 LJQas_10027722 521

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

23

417

0.9

PF00083

Sugar_tr

Sugar (and other) transporter

30

185

0.86

PF06609

TRI12

Fungal trichothecene efflux pump (TRI12)

11

506

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
8pnl-assembly2.cif.gz_C outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.8338 20 443
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.828 17 447
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8181 16 463
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8167 22 445
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.8155 17 447
ID Description Score Start End Superfamily
af_Q04301_34_211_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9718 22 194 1.20.1250.20
af_Q86M88_601_814_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9632 23 220 1.20.1250.20
af_Q2G2W1_141_346_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9555 25 223 1.20.1250.20
af_P9WG85_29_254_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9551 25 249 1.20.1250.20
af_Q9HE13_92_349_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9523 25 274 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A358L8V1-F1-model_v4 EmrB/QacA family drug resistance transporter 0.9622 21 200 GO:0005886
GO:0022857
AF-A0A094BGB3-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9422 19 208 GO:0005682
GO:0016020
GO:0022857
AF-A0A0F4Z2X5-F1-model_v4 Bcmfs1, multidrug efflux transporter 0.9285 19 304 GO:0005886
GO:0022857
AF-A0A3D1QCW4-F1-model_v4 MFS transporter 0.9242 20 235 GO:0005886
GO:0022857
AF-A0A7K3L487-F1-model_v4 MFS transporter 0.9199 17 251 GO:0016020
GO:0022857

Feature Viewer

pLDDT pTM Quality
80.31 0.78 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map