F324286

General Info

Members Datasets Scaffolds Average Seq Length
213 163 426 395

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0046693|Ga0436365_0046693_30536_31915
Length 459
Sequence VNGKRRRSGFPARLRSAKRHEKGQDGFEHREGVADGKRDGAALIKVNASAVSMTSPCRFLPRARGLALAICFVLALTGANPARAADPTEIRIGYLHLLESKQQPISLLDEPNEDDGIAGAALAIEDNNGTGRFTNQHFSIEDLRLKPTEDAASAAKSLTDKGIMLIIVDLPAPMVLAAADAVRSASATLFDVGAYDDSLREENCRANVIHIAPTRSMLADALAQYLSWKRXXXXLLVTGSHPQDALFADALKRAAKRFGGTIVEERIYKDTGGARRTDTGIVQTQRQIPVFTQNAPAYDVLVAADESNVFAGYLPYRTWDARPVAGSAGLVPTSWDPAHDSWGAVQMQNRFIKLAHRRMKAIDMQAWTAARMIGEGATRTQSADATKIIAFIKSPGFEVAAFKGQKLTLRDWNLQLRQPILLSDGRNVVSVSPQEGYLHQTSELDTLGYDRPETKCKLN

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
3 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
51 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
82 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
85 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
86 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
87 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
93 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
94 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
95 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
100 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
101 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
104 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
105 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
106 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
124 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
125 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
134 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
137 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
138 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
141 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
142 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
143 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
144 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
145 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
146 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
147 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
148 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
149 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
150 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
153 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
154 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
155 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
156 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
157 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
158 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
159 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
160 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
161 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
162 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
163 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.84
Metatranscriptomes 0
Isolates 5.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.33
Nodule 2.82
Rhizoplane 11.27
Rhizosphere 59.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0046693 3300039437 Bacteria 37239
2 JGI24750J21931_1001115 3300002070 Bacteria 3468
3 JGI24744J21845_10001539 3300002077 Bacteria 4590
4 Ga0070658_10003312 3300005327 Bacteria 13290
5 Ga0070677_10050348 3300005333 Bacteria 1682
6 Ga0070680_100039247 3300005336 Bacteria 3832
7 Ga0070682_100008977 3300005337 Bacteria 5648
8 Ga0070687_100016573 3300005343 Bacteria 3365
9 Ga0070668_100054935 3300005347 Bacteria 3073
10 Ga0070671_100072071 3300005355 Bacteria 2884
11 Ga0070674_100191313 3300005356 Bacteria 1574
12 Ga0070673_100177926 3300005364 Bacteria 1819
13 Ga0070688_100135474 3300005365 Bacteria 1667
14 Ga0070701_10006630 3300005438 Bacteria 4884
15 Ga0070700_100165984 3300005441 Bacteria 1525
16 Ga0070678_100084365 3300005456 Bacteria 2418
17 Ga0070662_100053459 3300005457 Bacteria 2923
18 Ga0070662_100199052 3300005457 Bacteria 1588
19 Ga0070685_10023023 3300005466 Bacteria 3405
20 Ga0070706_100166900 3300005467 Bacteria 2055
21 Ga0070698_100124608 3300005471 Bacteria 2534
22 Ga0068855_100127293 3300005563 Bacteria 2911
23 Ga0070664_100049178 3300005564 Bacteria 3565
24 Ga0068854_100019237 3300005578 Bacteria 4599
25 Ga0068856_100073001 3300005614 Bacteria 3397
26 Ga0068859_100270677 3300005617 Bacteria 1791
27 Ga0068866_10039916 3300005718 Bacteria 2320
28 Ga0068858_100124586 3300005842 Bacteria 2412
29 Ga0081540_1000308 3300005983 Bacteria 50401
30 Ga0081540_1006029 3300005983 Bacteria 8917
31 Ga0070717_10037693 3300006028 Bacteria 3927
32 Ga0070717_10115475 3300006028 Bacteria 2294
33 Ga0070717_10228446 3300006028 Bacteria 1638
34 Ga0075363_100005385 3300006048 Bacteria 5687
35 Ga0075364_10018926 3300006051 Bacteria 4318
36 Ga0075366_10006876 3300006195 Bacteria 6258
37 Ga0068865_100054562 3300006881 Bacteria 2777
38 Ga0075436_100008201 3300006914 Bacteria 7149
39 Ga0097620_100270671 3300006931 Bacteria 1791
40 Ga0105247_10009988 3300009101 Bacteria 5748
41 Ga0105247_10015222 3300009101 Bacteria 4612
42 Ga0105243_10106169 3300009148 Bacteria 2341
43 Ga0105248_10024540 3300009177 Bacteria 6704
44 Ga0105248_10027955 3300009177 Bacteria 6280
45 Ga0105237_10006785 3300009545 Bacteria 12627
46 Ga0105237_10075657 3300009545 Bacteria 3358
47 Ga0105249_10451749 3300009553 Bacteria 1324
48 Ga0105246_10112285 3300011119 Bacteria 2004
49 Ga0157369_10147863 3300013105 Bacteria 2484
50 Ga0157374_10075837 3300013296 Bacteria 3178
51 Ga0157375_10023392 3300013308 Bacteria 5701
52 Ga0157375_10294829 3300013308 Bacteria 1785
53 Ga0157377_10089159 3300014745 Bacteria 1818
54 Ga0157379_10176319 3300014968 Bacteria 1930
55 Ga0213873_10002594 3300021358 Bacteria 3148
56 Ga0213876_10000694 3300021384 Bacteria 23745
57 Ga0213876_10002333 3300021384 Bacteria 11197
58 Ga0213875_10000045 3300021388 Bacteria 150013
59 Ga0213875_10001361 3300021388 Bacteria 16065
60 Ga0213875_10017301 3300021388 Bacteria 3484
61 Ga0213875_10075025 3300021388 Bacteria 1578
62 Ga0207426_1005896 3300025302 Bacteria 5450
63 Ga0209257_1015615 3300025304 Bacteria 3145
64 Ga0207682_10007247 3300025893 Bacteria 4430
65 Ga0207642_10004478 3300025899 Bacteria 4510
66 Ga0207710_10004866 3300025900 Bacteria 5821
67 Ga0207688_10004565 3300025901 Bacteria 7538
68 Ga0207647_10007822 3300025904 Bacteria 7695
69 Ga0207645_10025439 3300025907 Bacteria 3830
70 Ga0207645_10101734 3300025907 Bacteria 1854
71 Ga0207684_10067545 3300025910 Bacteria 3038
72 Ga0207693_10022183 3300025915 Bacteria 5046
73 Ga0207693_10022271 3300025915 Bacteria 5036
74 Ga0207662_10004590 3300025918 Bacteria 7281
75 Ga0207657_10021134 3300025919 Bacteria 6132
76 Ga0207657_10114299 3300025919 Bacteria 2226
77 Ga0207652_10019279 3300025921 Bacteria 5608
78 Ga0207659_10295664 3300025926 Bacteria 1328
79 Ga0207644_10226546 3300025931 Bacteria 1484
80 Ga0207690_10014589 3300025932 Bacteria 4746
81 Ga0207706_10009793 3300025933 Bacteria 8794
82 Ga0207709_10049580 3300025935 Bacteria 2564
83 Ga0207691_10064477 3300025940 Bacteria 3319
84 Ga0207711_10007853 3300025941 Bacteria 8919
85 Ga0207667_10148110 3300025949 Bacteria 2416
86 Ga0207678_10011597 3300026067 Bacteria 7743
87 Ga0207708_10176926 3300026075 Bacteria 1692
88 Ga0207648_10021621 3300026089 Bacteria 5781
89 Ga0207683_10026338 3300026121 Bacteria 5019
90 Ga0307515_10237441 3300028794 Bacteria 1601
91 Ga0265328_10000019 3300031239 Bacteria 130536
92 Ga0265328_10000246 3300031239 Bacteria 24980
93 Ga0265328_10009139 3300031239 Bacteria 4045
94 Ga0265328_10034049 3300031239 Bacteria 1886
95 Ga0265331_10000730 3300031250 Bacteria 27712
96 Ga0265331_10003162 3300031250 Bacteria 10753
97 Ga0265327_10004012 3300031251 Bacteria 13402
98 Ga0265316_10000091 3300031344 Bacteria 96882
99 Ga0265316_10018462 3300031344 Bacteria 5992
100 Ga0265316_10038846 3300031344 Bacteria 3829
101 Ga0307513_10178890 3300031456 Bacteria 1987
102 Ga0307509_10105759 3300031507 Bacteria 2834
103 Ga0307509_10215762 3300031507 Bacteria 1738
104 Ga0316575_10021158 3300031665 Bacteria 2502
105 Ga0307416_100112168 3300032002 Bacteria 2406
106 Ga0307416_100123517 3300032002 Bacteria 2314
107 Ga0316583_10012835 3300032133 Bacteria 3023
108 Ga0307510_10003003 3300033180 Bacteria 19416
109 Ga0373934_0102859 3300035086 Bacteria 1155
110 Ga0373927_0012431 3300035695 Bacteria 5668
111 Ga0373937_0157562 3300036401 Bacteria 2129
112 Ga0373925_0043637 3300037068 Bacteria 3329
113 Ga0395898_0015789 3300037466 Bacteria 7739
114 Ga0436364_0271149 3300037853 Bacteria 2805
115 Ga0436364_0478480 3300037853 Bacteria 14880
116 Ga0436364_1057555 3300037853 Bacteria 51632
117 Ga0436364_1059471 3300037853 Bacteria 3265
118 Ga0436364_1288182 3300037853 Bacteria 5151
119 Ga0436364_1456826 3300037853 Bacteria 1470
120 Ga0436365_0499375 3300039437 Bacteria 98723
121 Ga0436365_0694772 3300039437 Bacteria 4700
122 Ga0436365_1501448 3300039437 Bacteria 5489
123 Ga0436360_1203620 3300039438 Bacteria 4513
124 Ga0436363_0720333 3300039450 Bacteria 51178
125 Ga0436363_1202196 3300039450 Bacteria 2341
126 Ga0436363_1258959 3300039450 Bacteria 1888
127 Ga0436362_0466047 3300039453 Bacteria 7680
128 Ga0439465_0011667 3300041413 Bacteria 2756
129 Ga0466967_0180647 3300045976 Bacteria 1990
130 Ga0495629_0012010 3300046459 Bacteria 6278
131 Ga0495638_0003147 3300046460 Bacteria 13060
132 Ga0495638_0092724 3300046460 Bacteria 1818
133 Ga0495650_0033770 3300046471 Bacteria 2273
134 Ga0495664_0015371 3300046477 Bacteria 4350
135 Ga0495594_0057276 3300046499 Bacteria 2152
136 Ga0495652_0042001 3300046529 Bacteria 3944
137 Ga0495622_0017349 3300046557 Bacteria 3351
138 Ga0495656_0057746 3300046615 Bacteria 1681
139 Ga0495599_0127625 3300046678 Bacteria 1580
140 Ga0495589_0059425 3300046794 Bacteria 1879
141 Ga0495672_0016744 3300047320 Bacteria 4923
142 Ga0495676_0053974 3300047321 Bacteria 3198
143 Ga0495676_0064797 3300047321 Bacteria 2839
144 Ga0496100_0138033 3300048903 Bacteria 1725
145 Ga0496103_0003436 3300048906 Bacteria 9682
146 Ga0496104_0000569 3300048907 Bacteria 31529
147 Ga0496104_0001811 3300048907 Bacteria 18534
148 Ga0496104_0007397 3300048907 Bacteria 9701
149 Ga0496104_0044402 3300048907 Bacteria 4175
150 Ga0496104_0298232 3300048907 Bacteria 1524
151 Ga0496105_0000046 3300048908 Bacteria 101134
152 Ga0496105_0026073 3300048908 Bacteria 4763
153 Ga0496105_0042484 3300048908 Bacteria 3747
154 Ga0496106_0046468 3300048909 Bacteria 3264
155 Ga0496107_0023099 3300048910 Bacteria 4395
156 Ga0496108_0010500 3300048911 Bacteria 7522
157 Ga0496109_0016551 3300048912 Bacteria 6448
158 Ga0496109_0097714 3300048912 Bacteria 2722
159 Ga0496110_0032380 3300048913 Bacteria 4514
160 Ga0496111_0002082 3300048914 Bacteria 11928
161 Ga0496112_0031189 3300048915 Bacteria 5167
162 Ga0496113_0001363 3300048916 Bacteria 13533
163 Ga0496113_0039340 3300048916 Bacteria 3480
164 Ga0496114_0086156 3300048917 Bacteria 2662
165 Ga0496115_0009275 3300048918 Bacteria 7312
166 Ga0496115_0034676 3300048918 Bacteria 3988
167 Ga0496117_0071931 3300048920 Bacteria 2315
168 Ga0496118_0101524 3300048921 Bacteria 1942
169 Ga0496119_0000894 3300048922 Bacteria 39028
170 Ga0496121_0028241 3300048924 Bacteria 5227
171 Ga0496125_0037775 3300048928 Bacteria 4194
172 Ga0496125_0085125 3300048928 Bacteria 2397
173 Ga0496126_0001402 3300048929 Bacteria 38138
174 Ga0496126_0026533 3300048929 Bacteria 5553
175 Ga0501070_0096571 3300049586 Bacteria 2445
176 Ga0501074_0021135 3300049590 Bacteria 4727
177 Ga0501080_0014453 3300049742 Bacteria 7271
178 Ga0501044_0047793 3300049823 Bacteria 4425
179 Ga0501044_0047934 3300049823 Bacteria 4418
180 nmdc:mga0k408_32013_c1 3300050493 Bacteria 3004
181 nmdc:mga04h51_16889_c1 3300050495 Bacteria 2125
182 nmdc:mga08y16_391345_c1 3300050511 Bacteria 1424
183 nmdc:mga08x19_5793_c1 3300050514 Bacteria 7305
184 nmdc:mga0sz30_28602_c1 3300050516 Bacteria 2295
185 Ga0495612_0005795 3300053078 Bacteria 5100
186 Ga0495612_0021794 3300053078 Bacteria 2570
187 Ga0495619_0007787 3300053085 Bacteria 6782
188 Ga0500566_0002250 3300053094 Bacteria 11409
189 Ga0500566_0003080 3300053094 Bacteria 9963
190 Ga0500554_007816 3300053102 Bacteria 2480
191 Ga0500572_000524 3300053111 Bacteria 13090
192 Ga0500595_000903 3300053119 Bacteria 16937
193 Ga0500559_0004603 3300053136 Bacteria 6517
194 Ga0500603_012347 3300053150 Bacteria 1961
195 Ga0500630_001359 3300053159 Bacteria 11529
196 Ga0500634_0108865 3300053161 Bacteria 1372
197 Ga0500639_000003 3300053163 Bacteria 230428
198 Ga0500637_0008331 3300053178 Bacteria 5220
199 Ga0500637_0015082 3300053178 Bacteria 4086
200 Ga0500552_001293 3300053733 Bacteria 2382
201 Ga0501084_0246952 3300054114 Bacteria 1507
202 Ga0500661_001770 3300055283 Bacteria 4070
203 2513893245 2513237141 Bacteria 8496279
204 2599719675 2599185236 Bacteria 6875203
205 2792624525 2791355091 Bacteria 6135441
206 2885419047 2885409591 Bacteria 9235467
207 2891090921 2891088606 Bacteria 4762464
208 2896386057 2896384573 Bacteria 7700774
209 2920760547 2920760137 Bacteria 7427611
210 2932811651 2932809354 Bacteria 9135765
211 2932826432 2932818245 Bacteria 9955613
212 2935999135 2935992306 Bacteria 9802711
213 8006969014 8006964411 Bacteria 8966052
214 Ga0436365_0046693
215 JGI24750J21931_1001115
216 JGI24744J21845_10001539
217 Ga0070658_10003312
218 Ga0070677_10050348
219 Ga0070680_100039247
220 Ga0070682_100008977
221 Ga0070687_100016573
222 Ga0070668_100054935
223 Ga0070671_100072071
224 Ga0070674_100191313
225 Ga0070673_100177926
226 Ga0070688_100135474
227 Ga0070701_10006630
228 Ga0070700_100165984
229 Ga0070678_100084365
230 Ga0070662_100053459
231 Ga0070662_100199052
232 Ga0070685_10023023
233 Ga0070706_100166900
234 Ga0070698_100124608
235 Ga0068855_100127293
236 Ga0070664_100049178
237 Ga0068854_100019237
238 Ga0068856_100073001
239 Ga0068859_100270677
240 Ga0068866_10039916
241 Ga0068858_100124586
242 Ga0081540_1000308
243 Ga0081540_1006029
244 Ga0070717_10037693
245 Ga0070717_10115475
246 Ga0070717_10228446
247 Ga0075363_100005385
248 Ga0075364_10018926
249 Ga0075366_10006876
250 Ga0068865_100054562
251 Ga0075436_100008201
252 Ga0097620_100270671
253 Ga0105247_10009988
254 Ga0105247_10015222
255 Ga0105243_10106169
256 Ga0105248_10024540
257 Ga0105248_10027955
258 Ga0105237_10006785
259 Ga0105237_10075657
260 Ga0105249_10451749
261 Ga0105246_10112285
262 Ga0157369_10147863
263 Ga0157374_10075837
264 Ga0157375_10023392
265 Ga0157375_10294829
266 Ga0157377_10089159
267 Ga0157379_10176319
268 Ga0213873_10002594
269 Ga0213876_10000694
270 Ga0213876_10002333
271 Ga0213875_10000045
272 Ga0213875_10001361
273 Ga0213875_10017301
274 Ga0213875_10075025
275 Ga0207426_1005896
276 Ga0209257_1015615
277 Ga0207682_10007247
278 Ga0207642_10004478
279 Ga0207710_10004866
280 Ga0207688_10004565
281 Ga0207647_10007822
282 Ga0207645_10025439
283 Ga0207645_10101734
284 Ga0207684_10067545
285 Ga0207693_10022183
286 Ga0207693_10022271
287 Ga0207662_10004590
288 Ga0207657_10021134
289 Ga0207657_10114299
290 Ga0207652_10019279
291 Ga0207659_10295664
292 Ga0207644_10226546
293 Ga0207690_10014589
294 Ga0207706_10009793
295 Ga0207709_10049580
296 Ga0207691_10064477
297 Ga0207711_10007853
298 Ga0207667_10148110
299 Ga0207678_10011597
300 Ga0207708_10176926
301 Ga0207648_10021621
302 Ga0207683_10026338
303 Ga0307515_10237441
304 Ga0265328_10000019
305 Ga0265328_10000246
306 Ga0265328_10009139
307 Ga0265328_10034049
308 Ga0265331_10000730
309 Ga0265331_10003162
310 Ga0265327_10004012
311 Ga0265316_10000091
312 Ga0265316_10018462
313 Ga0265316_10038846
314 Ga0307513_10178890
315 Ga0307509_10105759
316 Ga0307509_10215762
317 Ga0316575_10021158
318 Ga0307416_100112168
319 Ga0307416_100123517
320 Ga0316583_10012835
321 Ga0307510_10003003
322 Ga0373934_0102859
323 Ga0373927_0012431
324 Ga0373937_0157562
325 Ga0373925_0043637
326 Ga0395898_0015789
327 Ga0436364_0271149
328 Ga0436364_0478480
329 Ga0436364_1057555
330 Ga0436364_1059471
331 Ga0436364_1288182
332 Ga0436364_1456826
333 Ga0436365_0499375
334 Ga0436365_0694772
335 Ga0436365_1501448
336 Ga0436360_1203620
337 Ga0436363_0720333
338 Ga0436363_1202196
339 Ga0436363_1258959
340 Ga0436362_0466047
341 Ga0439465_0011667
342 Ga0466967_0180647
343 Ga0495629_0012010
344 Ga0495638_0003147
345 Ga0495638_0092724
346 Ga0495650_0033770
347 Ga0495664_0015371
348 Ga0495594_0057276
349 Ga0495652_0042001
350 Ga0495622_0017349
351 Ga0495656_0057746
352 Ga0495599_0127625
353 Ga0495589_0059425
354 Ga0495672_0016744
355 Ga0495676_0053974
356 Ga0495676_0064797
357 Ga0496100_0138033
358 Ga0496103_0003436
359 Ga0496104_0000569
360 Ga0496104_0001811
361 Ga0496104_0007397
362 Ga0496104_0044402
363 Ga0496104_0298232
364 Ga0496105_0000046
365 Ga0496105_0026073
366 Ga0496105_0042484
367 Ga0496106_0046468
368 Ga0496107_0023099
369 Ga0496108_0010500
370 Ga0496109_0016551
371 Ga0496109_0097714
372 Ga0496110_0032380
373 Ga0496111_0002082
374 Ga0496112_0031189
375 Ga0496113_0001363
376 Ga0496113_0039340
377 Ga0496114_0086156
378 Ga0496115_0009275
379 Ga0496115_0034676
380 Ga0496117_0071931
381 Ga0496118_0101524
382 Ga0496119_0000894
383 Ga0496121_0028241
384 Ga0496125_0037775
385 Ga0496125_0085125
386 Ga0496126_0001402
387 Ga0496126_0026533
388 Ga0501070_0096571
389 Ga0501074_0021135
390 Ga0501080_0014453
391 Ga0501044_0047793
392 Ga0501044_0047934
393 nmdc:mga0k408_32013_c1
394 nmdc:mga04h51_16889_c1
395 nmdc:mga08y16_391345_c1
396 nmdc:mga08x19_5793_c1
397 nmdc:mga0sz30_28602_c1
398 Ga0495612_0005795
399 Ga0495612_0021794
400 Ga0495619_0007787
401 Ga0500566_0002250
402 Ga0500566_0003080
403 Ga0500554_007816
404 Ga0500572_000524
405 Ga0500595_000903
406 Ga0500559_0004603
407 Ga0500603_012347
408 Ga0500630_001359
409 Ga0500634_0108865
410 Ga0500639_000003
411 Ga0500637_0008331
412 Ga0500637_0015082
413 Ga0500552_001293
414 Ga0501084_0246952
415 Ga0500661_001770
416 2513893245
417 2599719675
418 2792624525
419 2885419047
420 2891090921
421 2896386057
422 2920760547
423 2932811651
424 2932826432
425 2935999135
426 8006969014

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13458

Peripla_BP_6

Periplasmic binding protein

90

422

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3n0w-assembly2.cif.gz_B crystal structure of a branched chain amino acid abc transporter periplasmic ligand-binding protein (bxe_c0949) from burkholderia xenovorans lb400 at 1.88 a resolution 0.7463 40 378
1qo0-assembly1.cif.gz_B amide receptor of the amidase operon of pseudomonas aeruginosa (amic) complexed with the negative regulator amir. 0.7229 41 381
4q6b-assembly1.cif.gz_A crystal structure of abc transporter substrate-binding protein fromdesulfitobacterium hafniense complex with leu 0.7211 39 379
4zpj-assembly1.cif.gz_A abc transporter substrate-binding protein from sphaerobacter thermophilus 0.7197 39 386
4q6b-assembly1.cif.gz_A crystal structure of abc transporter substrate-binding protein fromdesulfitobacterium hafniense complex with leu 0.7173 39 379
ID Description Score Start End Superfamily
af_Q54ET0_55_151_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8005 66 162 3.40.50.2300
3rsmA01 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.7793 164 216 3.40.120.10
af_Q54ET0_55_151_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.779 66 162 3.40.50.2300
af_Q9VEN6_71_200_3.30.420.80 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribosomal protein S11/S14 0.778 164 220 3.30.420.80
af_Q69L11_28_153_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7717 35 163 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A537SMH3-F1-model_v4 Branched-chain amino acid ABC transporter substrate-binding protein 0.9801 34 313 GO:0006865
AF-A0A435LZG0-F1-model_v4 deleted 0.9745 34 346
AF-A0A6N8DSE4-F1-model_v4 Branched-chain amino acid ABC transporter substrate-binding protein 0.96 34 406 GO:0006865
AF-A0A537VEV5-F1-model_v4 Branched-chain amino acid ABC transporter substrate-binding protein 0.9591 75 406 GO:0006865
AF-A0A2C9D2A4-F1-model_v4 ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system 0.9572 38 405 GO:0006865

Map