F324186

General Info

Members Datasets Scaffolds Average Seq Length
213 160 426 488

Family's Representative Sequence

Representative Sequence 3300030521|Ga0307511_10001143|Ga0307511_100011438
Length 521
Sequence VAADKVAGMARIAVIGAGMGAMAAAARLAVAGHRVAVYERTETYGGAVRRFERDGFSFDTGPGLLPVPAVYRDLFIKTGKEPLEDLVELVQVDPSSLHVFADGTEVSLPNASRAGVVTALDEALGAGAGQRWGDFLIRAREAWDRTRRPLLEEPLWPNWSVLAEQEPYPAVPHKKLLRTRRASTLSEIGAWELRDDRLTALLESHALAYGLHPRSAPASAAVLPYMEHAFGTWYVRGGIRELARAVYERCLARKVEFVFGAEVTRVLEKDGRAAGVELAGGTSQAFGSGGGTVVDADHVVADVDPARLRALTDRPLDGDSDVRADPESPRPVRLALLLALRGAREAGAVHRTVVHAPDREAELDFLASPGGDEPRCPTVTVLRPDDPALRPDGEHESAVVSAVLSSEADWGEEGTVRRYTDFLLKAAESAVPGLRERLLWHEVRTPDHTENETGAHFGAVPAPSLAAGRGRFLHPANTTRLPGLYRVGGWSHPGGGLAHAGMSGALVAGLIVEGPQFRGSQ

Samples

Sample ID Description Type Environment
1 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
4 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
5 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
6 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
7 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
8 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
9 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
10 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
11 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
12 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
13 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
14 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
15 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
16 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
17 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
18 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
19 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
20 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
21 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
22 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
23 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
24 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
25 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
26 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
27 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
28 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
29 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
30 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
31 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
32 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
33 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
34 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
35 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
36 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
37 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
38 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
39 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
40 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
41 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
42 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
43 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
44 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
45 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
46 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
47 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
48 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
49 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
50 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
51 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
52 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
53 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
54 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
55 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
56 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
57 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
58 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
59 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
60 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
61 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
62 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
63 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
64 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
65 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
66 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
67 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
68 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
69 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
70 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
71 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
72 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
73 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
74 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
75 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
76 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
77 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
78 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
79 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
80 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
81 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
82 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
83 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
84 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
85 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
86 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
87 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
88 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
89 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
90 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
91 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
106 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
107 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
108 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
109 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
110 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
111 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
112 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
113 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
114 2643221647 Streptomyces sp. Root369 Isolate Unclassified
115 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
116 2643221714 Streptomyces sp. Root264 Isolate Unclassified
117 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
118 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
119 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
120 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
121 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
122 2808606448 Streptomyces sp. 193411 Isolate Unclassified
123 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
124 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
125 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
126 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
127 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
128 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
129 2862574272 Streptomyces sp. AcE210 Isolate Nodule
130 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
131 2867428634 Streptomyces sp. RP5T Isolate Unclassified
132 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
133 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
134 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
135 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
136 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
137 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
138 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
139 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
140 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
141 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
142 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
143 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
144 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
145 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
146 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
147 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
148 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
149 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
150 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
151 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
152 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
153 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
154 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
155 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
156 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
157 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
158 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
159 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
160 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.06
Metatranscriptomes 0
Isolates 23.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.76
Nodule 1.41
Rhizoplane 0
Rhizosphere 79.34
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307511_10001143 3300030521 Bacteria 28236
2 rootH1_10234037 3300003323 Bacteria 3041
3 Ga0075363_100034890 3300006048 Bacteria 2629
4 Ga0075367_10005959 3300006178 Bacteria 6118
5 Ga0105251_10058689 3300009011 Bacteria 1816
6 Ga0157372_10084388 3300013307 Bacteria 3600
7 Ga0182008_10002405 3300014497 Bacteria 11763
8 Ga0182007_10003309 3300015262 Bacteria 7636
9 Ga0183367_1007 3300015688 Bacteria 498079
10 Ga0209758_1001595 3300025297 Bacteria 25943
11 Ga0207426_1015922 3300025302 Bacteria 2716
12 Ga0207647_10012829 3300025904 Bacteria 5822
13 Ga0307517_10003383 3300028786 Bacteria 24818
14 Ga0307515_10005348 3300028794 Bacteria 26076
15 Ga0307511_10062904 3300030521 Bacteria 2810
16 Ga0307512_10005460 3300030522 Bacteria 13266
17 Ga0307513_10014265 3300031456 Bacteria 9715
18 Ga0307509_10007629 3300031507 Bacteria 14065
19 Ga0307508_10031499 3300031616 Bacteria 4793
20 Ga0307508_10044335 3300031616 Bacteria 3980
21 Ga0307516_10010490 3300031730 Bacteria 10174
22 Ga0307507_10011268 3300033179 Bacteria 11332
23 Ga0307510_10028481 3300033180 Bacteria 6379
24 Ga0307510_10084685 3300033180 Bacteria 3051
25 Ga0395898_0002622 3300037466 Bacteria 20915
26 Ga0395898_0095506 3300037466 Bacteria 2856
27 Ga0395901_0063755 3300038443 Bacteria 3836
28 Ga0439436_0005650 3300041404 Bacteria 3833
29 Ga0439439_0003059 3300041406 Bacteria 3645
30 Ga0439433_0001185 3300041999 Bacteria 5355
31 Ga0439448_0002794 3300042005 Bacteria 4780
32 Ga0439455_0010059 3300042012 Bacteria 2069
33 Ga0439457_000057 3300042014 Bacteria 23506
34 Ga0439457_002596 3300042014 Bacteria 5107
35 Ga0439462_0017863 3300042015 Bacteria 1839
36 Ga0450894_000226 3300042131 Bacteria 10039
37 Ga0450903_000479 3300042138 Bacteria 8405
38 Ga0450906_000163 3300042145 Bacteria 12452
39 Ga0439458_0000792 3300042157 Bacteria 8110
40 Ga0466969_0050223 3300044656 Bacteria 2056
41 Ga0466969_0054513 3300044656 Bacteria 1958
42 Ga0466972_0008841 3300044658 Bacteria 5054
43 Ga0466972_0018492 3300044658 Bacteria 3484
44 Ga0466965_0002068 3300044683 Bacteria 8405
45 Ga0466966_0001985 3300044684 Bacteria 13254
46 Ga0466966_0055783 3300044684 Bacteria 2500
47 Ga0466961_0003433 3300044693 Bacteria 9887
48 Ga0466961_0004176 3300044693 Bacteria 9021
49 Ga0466963_0000369 3300044694 Bacteria 20426
50 Ga0466963_0002973 3300044694 Bacteria 9576
51 Ga0466963_0058255 3300044694 Bacteria 2575
52 Ga0466971_0000234 3300044719 Bacteria 21142
53 Ga0466971_0025161 3300044719 Bacteria 2658
54 Ga0466968_0058044 3300044735 Bacteria 1665
55 Ga0466970_0000387 3300044765 Bacteria 21332
56 Ga0466970_0001516 3300044765 Bacteria 11174
57 Ga0466957_0001876 3300044842 Bacteria 11123
58 Ga0466959_0001251 3300045049 Bacteria 15342
59 Ga0466958_0002304 3300045836 Bacteria 9523
60 Ga0466967_0006188 3300045976 Bacteria 8435
61 Ga0495592_0002277 3300046454 Bacteria 13536
62 Ga0495592_0007389 3300046454 Bacteria 8222
63 Ga0495603_0028137 3300046455 Bacteria 3390
64 Ga0495629_0025351 3300046459 Bacteria 4215
65 Ga0495629_0033264 3300046459 Bacteria 3647
66 Ga0495629_0059761 3300046459 Bacteria 2664
67 Ga0495629_0063009 3300046459 Bacteria 2589
68 Ga0495651_0002773 3300046462 Bacteria 13595
69 Ga0495639_0016077 3300046475 Bacteria 3246
70 Ga0495662_0006740 3300046476 Bacteria 5719
71 Ga0495662_0027303 3300046476 Bacteria 2758
72 Ga0495664_0000655 3300046477 Bacteria 17640
73 Ga0495594_0011290 3300046499 Bacteria 4641
74 Ga0495607_0011868 3300046501 Bacteria 5772
75 Ga0495606_0020761 3300046507 Bacteria 4830
76 Ga0495616_0019678 3300046513 Bacteria 3681
77 Ga0495618_0071547 3300046514 Bacteria 2206
78 Ga0495620_0003426 3300046515 Bacteria 9080
79 Ga0495628_0042292 3300046516 Bacteria 3634
80 Ga0495631_0003384 3300046518 Bacteria 8739
81 Ga0495648_0032577 3300046524 Bacteria 3417
82 Ga0495666_0025353 3300046526 Bacteria 2927
83 Ga0495652_0053880 3300046529 Bacteria 3427
84 Ga0495640_0020436 3300046533 Bacteria 4872
85 Ga0495587_0002882 3300046536 Bacteria 11521
86 Ga0495597_0010605 3300046542 Bacteria 4496
87 Ga0495668_0037481 3300046616 Bacteria 2712
88 Ga0495634_0003275 3300046642 Bacteria 13067
89 Ga0495634_0098356 3300046642 Bacteria 1893
90 Ga0495625_0018006 3300046660 Bacteria 5520
91 Ga0495625_0037118 3300046660 Bacteria 3576
92 Ga0495635_0003215 3300046663 Bacteria 11258
93 Ga0495635_0021284 3300046663 Bacteria 4520
94 Ga0495588_0006134 3300046674 Bacteria 5397
95 Ga0495657_0002061 3300046675 Bacteria 17090
96 Ga0495657_0007319 3300046675 Bacteria 8537
97 Ga0495657_0043931 3300046675 Bacteria 3043
98 Ga0495646_0002192 3300046680 Bacteria 11898
99 Ga0495613_0005362 3300046689 Bacteria 9631
100 Ga0495613_0017623 3300046689 Bacteria 5318
101 Ga0495613_0036746 3300046689 Bacteria 3632
102 Ga0495589_0012578 3300046794 Bacteria 4379
103 Ga0495604_0007550 3300047317 Bacteria 8601
104 Ga0495604_0056367 3300047317 Bacteria 3025
105 Ga0495636_0007564 3300047318 Bacteria 4277
106 Ga0495636_0021128 3300047318 Bacteria 2627
107 Ga0495636_0023600 3300047318 Bacteria 2491
108 Ga0495674_0017965 3300047319 Bacteria 6584
109 Ga0495674_0071923 3300047319 Bacteria 2984
110 Ga0495676_0010585 3300047321 Bacteria 8354
111 Ga0495676_0030391 3300047321 Bacteria 4585
112 Ga0495680_0042462 3300047322 Bacteria 3607
113 Ga0495687_001803 3300047443 Bacteria 18868
114 Ga0495687_006499 3300047443 Bacteria 7147
115 Ga0495687_022812 3300047443 Bacteria 2999
116 Ga0495687_027828 3300047443 Bacteria 2640
117 Ga0495675_0007900 3300047444 Bacteria 6572
118 Ga0495675_0128362 3300047444 Bacteria 1577
119 Ga0495677_0024234 3300047445 Bacteria 2201
120 Ga0495685_002462 3300047447 Bacteria 5803
121 Ga0495685_004414 3300047447 Bacteria 4545
122 Ga0495685_013442 3300047447 Bacteria 2779
123 Ga0495685_018628 3300047447 Bacteria 2383
124 Ga0495681_0001329 3300047470 Bacteria 18701
125 Ga0495593_0000195 3300047673 Bacteria 31928
126 Ga0495593_0023208 3300047673 Bacteria 3450
127 Ga0495602_0031884 3300048088 Bacteria 4973
128 Ga0495614_0001624 3300048089 Bacteria 9790
129 Ga0495614_0031495 3300048089 Bacteria 2282
130 Ga0501031_0012183 3300049568 Bacteria 5606
131 Ga0501032_0006169 3300049569 Bacteria 8821
132 Ga0501033_0001301 3300049570 Bacteria 22178
133 Ga0501033_0002660 3300049570 Bacteria 15008
134 Ga0501034_0001622 3300049571 Bacteria 29187
135 Ga0501034_0017277 3300049571 Bacteria 7401
136 Ga0501034_0027422 3300049571 Bacteria 5793
137 Ga0501036_0003801 3300049572 Bacteria 12106
138 Ga0501036_0017984 3300049572 Bacteria 5917
139 Ga0501036_0109579 3300049572 Bacteria 2333
140 Ga0501037_0002340 3300049573 Bacteria 13694
141 Ga0501037_0015900 3300049573 Bacteria 5541
142 Ga0501038_0008418 3300049574 Bacteria 9487
143 Ga0501038_0021101 3300049574 Bacteria 5851
144 Ga0501039_0013778 3300049575 Bacteria 6186
145 Ga0501043_0038332 3300049579 Bacteria 3768
146 Ga0501046_0048880 3300049580 Bacteria 3348
147 Ga0501046_0131236 3300049580 Bacteria 1900
148 Ga0501047_0015678 3300049581 Bacteria 7221
149 Ga0501047_0018607 3300049581 Bacteria 6659
150 Ga0501070_0000441 3300049586 Bacteria 37765
151 Ga0501035_0003277 3300049822 Bacteria 15517
152 Ga0501035_0011685 3300049822 Bacteria 8137
153 Ga0501044_0001392 3300049823 Bacteria 28338
154 Ga0501044_0029790 3300049823 Bacteria 5754
155 Ga0501044_0036064 3300049823 Bacteria 5175
156 Ga0501044_0075408 3300049823 Bacteria 3424
157 Ga0500610_0047588 3300053079 Bacteria 2229
158 Ga0500644_0004285 3300053088 Bacteria 3566
159 Ga0500608_057231 3300053122 Bacteria 1868
160 Ga0500636_0058739 3300053177 Bacteria 2248
161 Ga0466962_0000320 3300061719 Bacteria 20557
162 Ga0466962_0046364 3300061719 Bacteria 2077
163 2547409605 2547132111 Bacteria 8013147
164 2585306787 2582581313 Bacteria 10042643
165 2585314089 2582581314 Bacteria 11452267
166 2616694273 2616644814 Bacteria 11555299
167 2644271105 2643221647 Bacteria 10741251
168 2644435772 2643221678 Bacteria 9540101
169 2644629404 2643221714 Bacteria 9015452
170 2784587362 2784132148 Bacteria 8627943
171 2785344959 2784746763 Bacteria 9783172
172 2786668971 2786546132 Bacteria 10419719
173 2808840581 2808606359 Bacteria 9866990
174 2808919160 2808606375 Bacteria 9466072
175 2809230935 2808606448 Bacteria 8656184
176 2812359602 2811994879 Bacteria 9313447
177 2812481725 2811994917 Bacteria 7761064
178 2852638415 2852635781 Bacteria 8251373
179 2862288702 2862281513 Bacteria 9621493
180 2862383930 2862382967 Bacteria 10317375
181 2862512524 2862507626 Bacteria 9425308
182 2862582953 2862574272 Bacteria 10567477
183 2863406222 2863404153 Bacteria 9672205
184 2867437207 2867428634 Bacteria 9590268
185 2873157036 2873151551 Bacteria 8625867
186 2877682627 2877676314 Bacteria 9512378
187 2912721653 2912715099 Bacteria 9460473
188 2912725496 2912723979 Bacteria 8557534
189 2919468131 2919468124 Bacteria 9133025
190 2946066308 2946064051 Bacteria 8957905
191 2946074577 2946072368 Bacteria 8999607
192 2947231070 2947224130 Bacteria 9938529
193 2954004376 2954002825 Bacteria 9173742
194 2954387825 2954380949 Bacteria 10050426
195 2954675252 2954673503 Bacteria 9685905
196 2954688883 2954682443 Bacteria 9862841
197 2954698638 2954691527 Bacteria 10720516
198 2954703587 2954701450 Bacteria 10834262
199 2954717609 2954711539 Bacteria 10867210
200 2954727574 2954721474 Bacteria 10456478
201 2954734227 2954731030 Bacteria 10243860
202 2954746469 2954740390 Bacteria 10229294
203 2954753111 2954749733 Bacteria 10366972
204 2954765585 2954759201 Bacteria 9358192
205 2990060789 2990059506 Bacteria 9321252
206 3006398636 3006393351 Bacteria 6615579
207 3006495531 3006493962 Bacteria 8825450
208 8008562087 8008558824 Bacteria 10610750
209 8008580093 8008574985 Bacteria 7815457
210 8023627520 8023623736 Bacteria 8593882
211 8025414027 8025413630 Bacteria 7014048
212 8048409063 8048406513 Bacteria 8936924
213 8056831213 8056829672 Bacteria 9045328
214 Ga0307511_10001143
215 rootH1_10234037
216 Ga0075363_100034890
217 Ga0075367_10005959
218 Ga0105251_10058689
219 Ga0157372_10084388
220 Ga0182008_10002405
221 Ga0182007_10003309
222 Ga0183367_1007
223 Ga0209758_1001595
224 Ga0207426_1015922
225 Ga0207647_10012829
226 Ga0307517_10003383
227 Ga0307515_10005348
228 Ga0307511_10062904
229 Ga0307512_10005460
230 Ga0307513_10014265
231 Ga0307509_10007629
232 Ga0307508_10031499
233 Ga0307508_10044335
234 Ga0307516_10010490
235 Ga0307507_10011268
236 Ga0307510_10028481
237 Ga0307510_10084685
238 Ga0395898_0002622
239 Ga0395898_0095506
240 Ga0395901_0063755
241 Ga0439436_0005650
242 Ga0439439_0003059
243 Ga0439433_0001185
244 Ga0439448_0002794
245 Ga0439455_0010059
246 Ga0439457_000057
247 Ga0439457_002596
248 Ga0439462_0017863
249 Ga0450894_000226
250 Ga0450903_000479
251 Ga0450906_000163
252 Ga0439458_0000792
253 Ga0466969_0050223
254 Ga0466969_0054513
255 Ga0466972_0008841
256 Ga0466972_0018492
257 Ga0466965_0002068
258 Ga0466966_0001985
259 Ga0466966_0055783
260 Ga0466961_0003433
261 Ga0466961_0004176
262 Ga0466963_0000369
263 Ga0466963_0002973
264 Ga0466963_0058255
265 Ga0466971_0000234
266 Ga0466971_0025161
267 Ga0466968_0058044
268 Ga0466970_0000387
269 Ga0466970_0001516
270 Ga0466957_0001876
271 Ga0466959_0001251
272 Ga0466958_0002304
273 Ga0466967_0006188
274 Ga0495592_0002277
275 Ga0495592_0007389
276 Ga0495603_0028137
277 Ga0495629_0025351
278 Ga0495629_0033264
279 Ga0495629_0059761
280 Ga0495629_0063009
281 Ga0495651_0002773
282 Ga0495639_0016077
283 Ga0495662_0006740
284 Ga0495662_0027303
285 Ga0495664_0000655
286 Ga0495594_0011290
287 Ga0495607_0011868
288 Ga0495606_0020761
289 Ga0495616_0019678
290 Ga0495618_0071547
291 Ga0495620_0003426
292 Ga0495628_0042292
293 Ga0495631_0003384
294 Ga0495648_0032577
295 Ga0495666_0025353
296 Ga0495652_0053880
297 Ga0495640_0020436
298 Ga0495587_0002882
299 Ga0495597_0010605
300 Ga0495668_0037481
301 Ga0495634_0003275
302 Ga0495634_0098356
303 Ga0495625_0018006
304 Ga0495625_0037118
305 Ga0495635_0003215
306 Ga0495635_0021284
307 Ga0495588_0006134
308 Ga0495657_0002061
309 Ga0495657_0007319
310 Ga0495657_0043931
311 Ga0495646_0002192
312 Ga0495613_0005362
313 Ga0495613_0017623
314 Ga0495613_0036746
315 Ga0495589_0012578
316 Ga0495604_0007550
317 Ga0495604_0056367
318 Ga0495636_0007564
319 Ga0495636_0021128
320 Ga0495636_0023600
321 Ga0495674_0017965
322 Ga0495674_0071923
323 Ga0495676_0010585
324 Ga0495676_0030391
325 Ga0495680_0042462
326 Ga0495687_001803
327 Ga0495687_006499
328 Ga0495687_022812
329 Ga0495687_027828
330 Ga0495675_0007900
331 Ga0495675_0128362
332 Ga0495677_0024234
333 Ga0495685_002462
334 Ga0495685_004414
335 Ga0495685_013442
336 Ga0495685_018628
337 Ga0495681_0001329
338 Ga0495593_0000195
339 Ga0495593_0023208
340 Ga0495602_0031884
341 Ga0495614_0001624
342 Ga0495614_0031495
343 Ga0501031_0012183
344 Ga0501032_0006169
345 Ga0501033_0001301
346 Ga0501033_0002660
347 Ga0501034_0001622
348 Ga0501034_0017277
349 Ga0501034_0027422
350 Ga0501036_0003801
351 Ga0501036_0017984
352 Ga0501036_0109579
353 Ga0501037_0002340
354 Ga0501037_0015900
355 Ga0501038_0008418
356 Ga0501038_0021101
357 Ga0501039_0013778
358 Ga0501043_0038332
359 Ga0501046_0048880
360 Ga0501046_0131236
361 Ga0501047_0015678
362 Ga0501047_0018607
363 Ga0501070_0000441
364 Ga0501035_0003277
365 Ga0501035_0011685
366 Ga0501044_0001392
367 Ga0501044_0029790
368 Ga0501044_0036064
369 Ga0501044_0075408
370 Ga0500610_0047588
371 Ga0500644_0004285
372 Ga0500608_057231
373 Ga0500636_0058739
374 Ga0466962_0000320
375 Ga0466962_0046364
376 2547409605
377 2585306787
378 2585314089
379 2616694273
380 2644271105
381 2644435772
382 2644629404
383 2784587362
384 2785344959
385 2786668971
386 2808840581
387 2808919160
388 2809230935
389 2812359602
390 2812481725
391 2852638415
392 2862288702
393 2862383930
394 2862512524
395 2862582953
396 2863406222
397 2867437207
398 2873157036
399 2877682627
400 2912721653
401 2912725496
402 2919468131
403 2946066308
404 2946074577
405 2947231070
406 2954004376
407 2954387825
408 2954675252
409 2954688883
410 2954698638
411 2954703587
412 2954717609
413 2954727574
414 2954734227
415 2954746469
416 2954753111
417 2954765585
418 2990060789
419 3006398636
420 3006495531
421 8008562087
422 8008580093
423 8023627520
424 8025414027
425 8048409063
426 8056831213

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

14

75

0.92

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

22

512

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xr9-assembly1.cif.gz_B crystal structure of cals8 from micromonospora echinospora cocrystallized with nad and tdp-glucose 0.9883 18 48
4xrr-assembly1.cif.gz_A crystal structure of cals8 from micromonospora echinospora (p294s mutant) 0.9865 18 48
4xrr-assembly1.cif.gz_B crystal structure of cals8 from micromonospora echinospora (p294s mutant) 0.9864 18 48
5jca-assembly1.cif.gz_L nadp(h) bound nadh-dependent ferredoxin:nadp oxidoreductase (nfni) from pyrococcus furiosus 0.9729 18 55
5jfc-assembly1.cif.gz_L nadh-dependent ferredoxin:nadp oxidoreductase (nfni) from pyrococcus furiosus 0.9713 18 55
ID Description Score Start End Superfamily
af_A0A0P0V2P7_13_181_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9919 20 55 3.50.50.60
af_Q2FYG1_1_188_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9907 17 49 3.40.50.720
af_A0A1D6HR89_2_270_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9904 18 55 3.50.50.60
4xr9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9883 18 48 3.40.50.720
af_Q9SH25_10_168_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.986 18 55 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A6B1QTJ8-F1-model_v4 deleted 0.9191 17 444
AF-A0A6B1QTJ8-F1-model_v4 deleted 0.917 17 444
AF-A0A6B2THG4-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.8777 188 424 GO:0016491
AF-A0A7W1QRT7-F1-model_v4 Phytoene desaturase 0.8683 17 452 GO:0016117
GO:0016491
AF-A0A6B2THG4-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.8672 188 424 GO:0016491

Map