F323912

General Info

Members Datasets Scaffolds Average Seq Length
213 138 426 216

Family's Representative Sequence

Representative Sequence 3300006353|Ga0075370_10029523|Ga0075370_100295233
Length 252
Sequence MSVTRSIRRHAQHEASAVGAGTAASPATINGRGSVLATHSQSMQRRAEAQARVRQHGAALQVQELPSFGFSHRSLMWWGTLGLMAIESTVFALTVVAYFYLRSHVSDWPMNSAPPELRWGSLNTALLLLSLWPNHLAKRAAERLDRRGVQLWLTVCLVASLLFLGIRVLEFGALNCRWDQDAYGSVVWTLLGLHTLHLVTDTWDTGVLAVLMFTDRVETRRFADVSENALYWYFVVWSWVPIYAVIYWGARP

Samples

Sample ID Description Type Environment
1 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
41 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
88 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
89 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
90 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
91 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
95 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
96 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
99 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
100 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
101 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
102 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
103 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
106 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
107 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
108 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
109 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
110 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
111 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
112 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
118 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
119 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
120 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
121 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
122 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
125 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
126 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
130 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
131 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
132 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
133 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
134 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
135 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
136 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
137 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
138 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.06
Metatranscriptomes 0
Isolates 0.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.16
Nodule 0.47
Rhizoplane 1.41
Rhizosphere 90.14
Stem 0
Stem Tuber 0
Unclassified 1.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075370_10029523 3300006353 Bacteria 3055
2 rootH2_10006711 3300003320 Bacteria 16645
3 rootH1_10068151 3300003323 Bacteria 5071
4 Ga0055540_1003201 3300003792 Bacteria 8046
5 Ga0055531_10001478 3300003794 Bacteria 17287
6 Ga0070670_100000750 3300005331 Bacteria 25161
7 Ga0070670_100065944 3300005331 Bacteria 3107
8 Ga0070666_10275091 3300005335 Bacteria 1196
9 Ga0068868_100068072 3300005338 Bacteria 2834
10 Ga0068868_100210718 3300005338 Bacteria 1624
11 Ga0070661_100136674 3300005344 Bacteria 1845
12 Ga0070661_100284637 3300005344 Bacteria 1283
13 Ga0070675_100000729 3300005354 Bacteria 22903
14 Ga0070675_100014174 3300005354 Bacteria 6284
15 Ga0070671_100047331 3300005355 Bacteria 3577
16 Ga0070671_100069856 3300005355 Bacteria 2929
17 Ga0070671_100096551 3300005355 Bacteria 2478
18 Ga0070671_100135829 3300005355 Bacteria 2073
19 Ga0070671_100319705 3300005355 Bacteria 1322
20 Ga0070674_100001626 3300005356 Bacteria 12080
21 Ga0070673_100003201 3300005364 Bacteria 10143
22 Ga0070673_100268895 3300005364 Bacteria 1491
23 Ga0070673_100350707 3300005364 Bacteria 1310
24 Ga0070667_100016282 3300005367 Bacteria 6150
25 Ga0070667_100424322 3300005367 Bacteria 1213
26 Ga0070663_100054001 3300005455 Bacteria 2870
27 Ga0070678_100009872 3300005456 Bacteria 5801
28 Ga0070678_100122593 3300005456 Bacteria 2052
29 Ga0068867_100002650 3300005459 Bacteria 12627
30 Ga0068867_100438480 3300005459 Bacteria 1110
31 Ga0070685_10159774 3300005466 Bacteria 1435
32 Ga0070672_100001519 3300005543 Bacteria 14361
33 Ga0070672_100046765 3300005543 Bacteria 3354
34 Ga0070672_100091396 3300005543 Bacteria 2455
35 Ga0070665_100187997 3300005548 Bacteria 2066
36 Ga0068855_101026515 3300005563 Bacteria 865
37 Ga0070664_100081265 3300005564 Bacteria 2793
38 Ga0070664_100090068 3300005564 Bacteria 2655
39 Ga0068854_100362207 3300005578 Bacteria 1190
40 Ga0070702_100275530 3300005615 Bacteria 1152
41 Ga0068852_100072018 3300005616 Bacteria 3036
42 Ga0068852_100420671 3300005616 Bacteria 1318
43 Ga0068864_100047215 3300005618 Bacteria 3697
44 Ga0068864_100091755 3300005618 Bacteria 2680
45 Ga0068851_10113868 3300005834 Bacteria 1447
46 Ga0068863_100037609 3300005841 Bacteria 4608
47 Ga0068863_101035490 3300005841 Bacteria 824
48 Ga0068858_100340696 3300005842 Bacteria 1435
49 Ga0097621_100001752 3300006237 Bacteria 14870
50 Ga0097621_100016979 3300006237 Bacteria 5518
51 Ga0097621_100156797 3300006237 Bacteria 1954
52 Ga0075370_10006265 3300006353 Bacteria 5973
53 Ga0075370_10054100 3300006353 Bacteria 2278
54 Ga0068871_100013783 3300006358 Bacteria 6011
55 Ga0068871_100240586 3300006358 Bacteria 1573
56 Ga0068871_100258232 3300006358 Unclassified 1519
57 Ga0068871_100513264 3300006358 Bacteria 1081
58 Ga0105248_10312919 3300009177 Bacteria 1769
59 Ga0105238_10230271 3300009551 Bacteria 1830
60 Ga0157378_10168849 3300013297 Bacteria 2050
61 Ga0163162_10109203 3300013306 Bacteria 2863
62 Ga0157375_10042534 3300013308 Bacteria 4398
63 Ga0157375_10043746 3300013308 Bacteria 4345
64 Ga0157375_10239524 3300013308 Bacteria 1974
65 Ga0157379_10040305 3300014968 Bacteria 4168
66 Ga0157376_10315270 3300014969 Bacteria 1485
67 Ga0209673_1008321 3300025273 Bacteria 4627
68 Ga0209758_1083531 3300025297 Bacteria 957
69 Ga0209051_1000025 3300025303 Bacteria 415397
70 Ga0209257_1000039 3300025304 Bacteria 591694
71 Ga0207656_10033372 3300025321 Bacteria 2144
72 Ga0207682_10000786 3300025893 Bacteria 14685
73 Ga0207688_10021258 3300025901 Bacteria 3544
74 Ga0207688_10140808 3300025901 Bacteria 1420
75 Ga0207680_10051491 3300025903 Bacteria 2463
76 Ga0207645_10014901 3300025907 Bacteria 5186
77 Ga0207649_10102668 3300025920 Bacteria 1896
78 Ga0207649_10204203 3300025920 Bacteria 1398
79 Ga0207650_10000563 3300025925 Bacteria 30069
80 Ga0207650_10001587 3300025925 Bacteria 16225
81 Ga0207659_10001239 3300025926 Bacteria 15296
82 Ga0207659_10112767 3300025926 Bacteria 2070
83 Ga0207644_10015340 3300025931 Bacteria 5140
84 Ga0207644_10146586 3300025931 Bacteria 1823
85 Ga0207644_10219159 3300025931 Bacteria 1507
86 Ga0207690_10501915 3300025932 Bacteria 981
87 Ga0207706_10256176 3300025933 Bacteria 1528
88 Ga0207669_10009468 3300025937 Bacteria 4642
89 Ga0207691_10000754 3300025940 Bacteria 31954
90 Ga0207691_10001263 3300025940 Bacteria 25342
91 Ga0207691_10003176 3300025940 Bacteria 16059
92 Ga0207711_10231227 3300025941 Bacteria 1693
93 Ga0207661_10155902 3300025944 Bacteria 1978
94 Ga0207679_10040443 3300025945 Bacteria 3338
95 Ga0207679_10087879 3300025945 Bacteria 2395
96 Ga0207651_10009932 3300025960 Bacteria 5242
97 Ga0207651_10030315 3300025960 Bacteria 3442
98 Ga0207651_10087524 3300025960 Bacteria 2268
99 Ga0207668_10079446 3300025972 Bacteria 2373
100 Ga0207640_10043524 3300025981 Bacteria 2871
101 Ga0207640_10595038 3300025981 Unclassified 935
102 Ga0207658_10015590 3300025986 Bacteria 5215
103 Ga0207658_10173703 3300025986 Bacteria 1778
104 Ga0207677_10099506 3300026023 Bacteria 2136
105 Ga0207677_10104753 3300026023 Bacteria 2092
106 Ga0207677_10239631 3300026023 Bacteria 1466
107 Ga0207678_10000957 3300026067 Bacteria 26396
108 Ga0207702_10522304 3300026078 Bacteria 1159
109 Ga0207648_10026691 3300026089 Bacteria 5130
110 Ga0207648_10085836 3300026089 Bacteria 2745
111 Ga0207676_10080878 3300026095 Bacteria 2638
112 Ga0207676_10295521 3300026095 Bacteria 1477
113 Ga0207674_10221912 3300026116 Bacteria 1838
114 Ga0207683_10003993 3300026121 Bacteria 12792
115 Ga0207683_10035329 3300026121 Bacteria 4346
116 Ga0207683_10158224 3300026121 Bacteria 2047
117 Ga0307515_10010548 3300028794 Bacteria 17693
118 Ga0307408_100147646 3300031548 Bacteria 1853
119 Ga0307516_10006017 3300031730 Bacteria 14341
120 Ga0307516_10393343 3300031730 Unclassified 1046
121 Ga0307405_10011161 3300031731 Bacteria 4691
122 Ga0307405_10127585 3300031731 Bacteria 1752
123 Ga0307413_10188022 3300031824 Bacteria 1480
124 Ga0307410_10035229 3300031852 Bacteria 3249
125 Ga0307410_10042964 3300031852 Bacteria 2991
126 Ga0307406_10011263 3300031901 Bacteria 5072
127 Ga0307406_10122326 3300031901 Bacteria 1812
128 Ga0307412_10022396 3300031911 Bacteria 3872
129 Ga0307412_10101501 3300031911 Bacteria 2036
130 Ga0307412_10177933 3300031911 Bacteria 1597
131 Ga0307409_100018085 3300031995 Bacteria 4723
132 Ga0307409_100124281 3300031995 Bacteria 2192
133 Ga0307409_100249868 3300031995 Bacteria 1621
134 Ga0307416_100003748 3300032002 Bacteria 9020
135 Ga0307416_100053628 3300032002 Bacteria 3236
136 Ga0307416_100881959 3300032002 Bacteria 994
137 Ga0307414_10127347 3300032004 Bacteria 1970
138 Ga0307414_10162259 3300032004 Bacteria 1777
139 Ga0307411_10048111 3300032005 Bacteria 2762
140 Ga0307411_10407483 3300032005 Unclassified 1126
141 Ga0307415_100002078 3300032126 Bacteria 9898
142 Ga0307415_100258450 3300032126 Bacteria 1419
143 Ga0307415_101026327 3300032126 Bacteria 768
144 Ga0395899_0197074 3300037312 Bacteria 1406
145 Ga0395898_0861043 3300037466 Bacteria 845
146 Ga0395905_0002840 3300037471 Bacteria 18974
147 Ga0395905_0003592 3300037471 Bacteria 16500
148 Ga0395905_0041277 3300037471 Bacteria 4330
149 Ga0395905_0415203 3300037471 Bacteria 1241
150 Ga0395901_0095947 3300038443 Bacteria 3108
151 Ga0451793_0654800 3300041452 Bacteria 1025
152 Ga0451800_1029926 3300041459 Bacteria 1188
153 Ga0439464_0068644 3300042439 Bacteria 1046
154 Ga0451577_0018125 3300042876 Bacteria 6488
155 Ga0466969_0001483 3300044656 Bacteria 12616
156 Ga0466969_0013411 3300044656 Bacteria 4315
157 Ga0466969_0114221 3300044656 Bacteria 1261
158 Ga0466965_0003276 3300044683 Bacteria 7084
159 Ga0466966_0002771 3300044684 Bacteria 11520
160 Ga0466966_0010530 3300044684 Bacteria 6144
161 Ga0466966_0016842 3300044684 Bacteria 4829
162 Ga0466961_0025610 3300044693 Bacteria 3792
163 Ga0466961_0054879 3300044693 Bacteria 2541
164 Ga0466963_0345967 3300044694 Bacteria 1047
165 Ga0466964_0010370 3300044706 Bacteria 3515
166 Ga0453684_0241005 3300044712 Bacteria 2082
167 Ga0466971_0035325 3300044719 Bacteria 2240
168 Ga0466968_0065734 3300044735 Bacteria 1570
169 Ga0466970_0005160 3300044765 Bacteria 6460
170 Ga0466970_0035554 3300044765 Bacteria 2639
171 Ga0466970_0155296 3300044765 Bacteria 1264
172 Ga0466970_0165859 3300044765 Bacteria 1223
173 Ga0466957_0042279 3300044842 Bacteria 2757
174 Ga0466959_0002855 3300045049 Bacteria 11139
175 Ga0466959_0049502 3300045049 Bacteria 3087
176 Ga0466958_0018153 3300045836 Bacteria 4077
177 Ga0466967_0149286 3300045976 Bacteria 2183
178 Ga0495603_0120243 3300046455 Bacteria 1531
179 Ga0495590_0002129 3300046457 Bacteria 8308
180 Ga0495651_0225322 3300046462 Bacteria 1295
181 Ga0495594_0181919 3300046499 Bacteria 1196
182 Ga0495596_0011180 3300046500 Bacteria 3881
183 Ga0495606_0064588 3300046507 Bacteria 2328
184 Ga0495606_0152780 3300046507 Bacteria 1353
185 Ga0495632_0038151 3300046519 Bacteria 2434
186 Ga0495642_0112236 3300046528 Bacteria 1166
187 Ga0495665_0012236 3300046531 Bacteria 4643
188 Ga0495622_0089476 3300046557 Bacteria 1414
189 Ga0495668_0000036 3300046616 Bacteria 235057
190 Ga0495625_0045608 3300046660 Bacteria 3167
191 Ga0495588_0051607 3300046674 Bacteria 2118
192 Ga0495623_0100765 3300046679 Bacteria 1760
193 Ga0495669_0119633 3300046684 Bacteria 1234
194 Ga0495589_0040355 3300046794 Bacteria 2331
195 Ga0495660_0007451 3300046810 Bacteria 6425
196 Ga0495581_0087201 3300047315 Bacteria 1809
197 Ga0495676_0015384 3300047321 Bacteria 6814
198 Ga0495683_0022228 3300047323 Bacteria 3262
199 Ga0495675_0117707 3300047444 Bacteria 1656
200 Ga0495593_0126732 3300047673 Bacteria 1297
201 Ga0496108_0494112 3300048911 Bacteria 1069
202 Ga0496117_0025845 3300048920 Bacteria 4604
203 Ga0501300_013772 3300049523 Bacteria 1180
204 Ga0501198_000003 3300049649 Bacteria 175301
205 Ga0501206_025075 3300049653 Bacteria 866
206 Ga0501222_000001 3300049662 Bacteria 307689
207 Ga0501249_036889 3300049679 Bacteria 1102
208 Ga0501262_029853 3300049759 Bacteria 781
209 Ga0501281_05283 3300049777 Bacteria 904
210 nmdc:mga07m45_45141_c1 3300050496 Bacteria 2474
211 nmdc:mga07m45_51396_c1 3300050496 Bacteria 2324
212 2515690149 2515154123 Bacteria 6387382
213 2945936001 2945934425 Bacteria 7444609
214 Ga0075370_10029523
215 rootH2_10006711
216 rootH1_10068151
217 Ga0055540_1003201
218 Ga0055531_10001478
219 Ga0070670_100000750
220 Ga0070670_100065944
221 Ga0070666_10275091
222 Ga0068868_100068072
223 Ga0068868_100210718
224 Ga0070661_100136674
225 Ga0070661_100284637
226 Ga0070675_100000729
227 Ga0070675_100014174
228 Ga0070671_100047331
229 Ga0070671_100069856
230 Ga0070671_100096551
231 Ga0070671_100135829
232 Ga0070671_100319705
233 Ga0070674_100001626
234 Ga0070673_100003201
235 Ga0070673_100268895
236 Ga0070673_100350707
237 Ga0070667_100016282
238 Ga0070667_100424322
239 Ga0070663_100054001
240 Ga0070678_100009872
241 Ga0070678_100122593
242 Ga0068867_100002650
243 Ga0068867_100438480
244 Ga0070685_10159774
245 Ga0070672_100001519
246 Ga0070672_100046765
247 Ga0070672_100091396
248 Ga0070665_100187997
249 Ga0068855_101026515
250 Ga0070664_100081265
251 Ga0070664_100090068
252 Ga0068854_100362207
253 Ga0070702_100275530
254 Ga0068852_100072018
255 Ga0068852_100420671
256 Ga0068864_100047215
257 Ga0068864_100091755
258 Ga0068851_10113868
259 Ga0068863_100037609
260 Ga0068863_101035490
261 Ga0068858_100340696
262 Ga0097621_100001752
263 Ga0097621_100016979
264 Ga0097621_100156797
265 Ga0075370_10006265
266 Ga0075370_10054100
267 Ga0068871_100013783
268 Ga0068871_100240586
269 Ga0068871_100258232
270 Ga0068871_100513264
271 Ga0105248_10312919
272 Ga0105238_10230271
273 Ga0157378_10168849
274 Ga0163162_10109203
275 Ga0157375_10042534
276 Ga0157375_10043746
277 Ga0157375_10239524
278 Ga0157379_10040305
279 Ga0157376_10315270
280 Ga0209673_1008321
281 Ga0209758_1083531
282 Ga0209051_1000025
283 Ga0209257_1000039
284 Ga0207656_10033372
285 Ga0207682_10000786
286 Ga0207688_10021258
287 Ga0207688_10140808
288 Ga0207680_10051491
289 Ga0207645_10014901
290 Ga0207649_10102668
291 Ga0207649_10204203
292 Ga0207650_10000563
293 Ga0207650_10001587
294 Ga0207659_10001239
295 Ga0207659_10112767
296 Ga0207644_10015340
297 Ga0207644_10146586
298 Ga0207644_10219159
299 Ga0207690_10501915
300 Ga0207706_10256176
301 Ga0207669_10009468
302 Ga0207691_10000754
303 Ga0207691_10001263
304 Ga0207691_10003176
305 Ga0207711_10231227
306 Ga0207661_10155902
307 Ga0207679_10040443
308 Ga0207679_10087879
309 Ga0207651_10009932
310 Ga0207651_10030315
311 Ga0207651_10087524
312 Ga0207668_10079446
313 Ga0207640_10043524
314 Ga0207640_10595038
315 Ga0207658_10015590
316 Ga0207658_10173703
317 Ga0207677_10099506
318 Ga0207677_10104753
319 Ga0207677_10239631
320 Ga0207678_10000957
321 Ga0207702_10522304
322 Ga0207648_10026691
323 Ga0207648_10085836
324 Ga0207676_10080878
325 Ga0207676_10295521
326 Ga0207674_10221912
327 Ga0207683_10003993
328 Ga0207683_10035329
329 Ga0207683_10158224
330 Ga0307515_10010548
331 Ga0307408_100147646
332 Ga0307516_10006017
333 Ga0307516_10393343
334 Ga0307405_10011161
335 Ga0307405_10127585
336 Ga0307413_10188022
337 Ga0307410_10035229
338 Ga0307410_10042964
339 Ga0307406_10011263
340 Ga0307406_10122326
341 Ga0307412_10022396
342 Ga0307412_10101501
343 Ga0307412_10177933
344 Ga0307409_100018085
345 Ga0307409_100124281
346 Ga0307409_100249868
347 Ga0307416_100003748
348 Ga0307416_100053628
349 Ga0307416_100881959
350 Ga0307414_10127347
351 Ga0307414_10162259
352 Ga0307411_10048111
353 Ga0307411_10407483
354 Ga0307415_100002078
355 Ga0307415_100258450
356 Ga0307415_101026327
357 Ga0395899_0197074
358 Ga0395898_0861043
359 Ga0395905_0002840
360 Ga0395905_0003592
361 Ga0395905_0041277
362 Ga0395905_0415203
363 Ga0395901_0095947
364 Ga0451793_0654800
365 Ga0451800_1029926
366 Ga0439464_0068644
367 Ga0451577_0018125
368 Ga0466969_0001483
369 Ga0466969_0013411
370 Ga0466969_0114221
371 Ga0466965_0003276
372 Ga0466966_0002771
373 Ga0466966_0010530
374 Ga0466966_0016842
375 Ga0466961_0025610
376 Ga0466961_0054879
377 Ga0466963_0345967
378 Ga0466964_0010370
379 Ga0453684_0241005
380 Ga0466971_0035325
381 Ga0466968_0065734
382 Ga0466970_0005160
383 Ga0466970_0035554
384 Ga0466970_0155296
385 Ga0466970_0165859
386 Ga0466957_0042279
387 Ga0466959_0002855
388 Ga0466959_0049502
389 Ga0466958_0018153
390 Ga0466967_0149286
391 Ga0495603_0120243
392 Ga0495590_0002129
393 Ga0495651_0225322
394 Ga0495594_0181919
395 Ga0495596_0011180
396 Ga0495606_0064588
397 Ga0495606_0152780
398 Ga0495632_0038151
399 Ga0495642_0112236
400 Ga0495665_0012236
401 Ga0495622_0089476
402 Ga0495668_0000036
403 Ga0495625_0045608
404 Ga0495588_0051607
405 Ga0495623_0100765
406 Ga0495669_0119633
407 Ga0495589_0040355
408 Ga0495660_0007451
409 Ga0495581_0087201
410 Ga0495676_0015384
411 Ga0495683_0022228
412 Ga0495675_0117707
413 Ga0495593_0126732
414 Ga0496108_0494112
415 Ga0496117_0025845
416 Ga0501300_013772
417 Ga0501198_000003
418 Ga0501206_025075
419 Ga0501222_000001
420 Ga0501249_036889
421 Ga0501262_029853
422 Ga0501281_05283
423 nmdc:mga07m45_45141_c1
424 nmdc:mga07m45_51396_c1
425 2515690149
426 2945936001

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00510

COX3

Cytochrome c oxidase subunit III

83

251

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hcr-assembly1.cif.gz_S cryo-em structure of the mycobacterium tuberculosis cytochrome bcc:aa3 supercomplex and a novel inhibitor targeting subunit cytochrome ci 0.9131 40 213
7e1v-assembly1.cif.gz_G cryo-em structure of apo hybrid respiratory supercomplex consisting of mycobacterium tuberculosis complexiii and mycobacterium smegmatis complexiv 0.8984 36 213
2yev-assembly2.cif.gz_A structure of caa3-type cytochrome oxidase 0.885 43 213
7cub-assembly1.cif.gz_C 2.55-angstrom cryo-em structure of cytochrome bo3 from escherichia coli in native membrane 0.8818 44 213
5gpn-assembly1.cif.gz_0 architecture of mammalian respirasome 0.8668 42 215
ID Description Score Start End Superfamily
af_P9WP67_20_203_1.20.120.80 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.9064 40 213 1.20.120.80
af_P9WP67_20_203_1.20.120.80 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.8554 40 213 1.20.120.80
af_Q2FZK1_13_198_1.20.120.80 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.8487 41 218 1.20.120.80
2yevD03 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.8481 40 213 1.20.120.80
af_P24891_68_255_1.20.120.80 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.8478 42 215 1.20.120.80
ID Description Score Start End GO Terms
AF-A0A4Q2J519-F1-model_v4 Cytochrome C oxidase subunit III 0.9861 48 218 GO:0004129
GO:0005886
GO:0019646
AF-A0A7V3F8T3-F1-model_v4 Cytochrome C oxidase subunit III 0.9849 43 219 GO:0004129
GO:0005886
GO:0019646
AF-A0A2V8IY27-F1-model_v4 Cytochrome C oxidase subunit III 0.9785 48 219 GO:0004129
GO:0005886
GO:0019646
AF-A0A4Q2J519-F1-model_v4 Cytochrome C oxidase subunit III 0.9748 48 218 GO:0004129
GO:0005886
GO:0019646
AF-A0A7V3F8T3-F1-model_v4 Cytochrome C oxidase subunit III 0.974 43 219 GO:0004129
GO:0005886
GO:0019646

Map